Pregenerated sensors for INTS13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040250Ensembl transcript IDs: ENSMUST00000032427.15, ENSMUST00000131662.2, ENSMUST00000139979.8, ENSMUST00000203545.3
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGCCCTTCTCTGCTGCTaGTCCCAGAGTGGCTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSALLCC*SQSGCH Trigger: GTGACAGCCACTCTGGGAGCAGCAGCAGAGAAGGGC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR GCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTATGGCCCTTCTCTGCTaGTGCTCCCAGAGTGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSMALLC*CSQSGC Trigger: ACAGCCACTCTGGGAGCAGCAGCAGAGAAGGGCCAT...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR CCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGATGCTGCAGCACTCTaGATCTGCCCGAGGGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSDAAAL*ICPRVR Trigger: CCTAACCCTCGGGCAGATCCAGAGTGCTGCAGCATC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR CCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCTGCTGCTCCCAGAGTaGCTGTCACCACTTCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSLLLPE*LSPLLR Trigger: CCTGAGAAGTGGTGACAGCCACTCTGGGAGCAGCAG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTTGGGAGCCAAAGGGATaGTGCCTTGGGTCCTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSWEPKG*CLGSCS Trigger: AGAACAGGACCCAAGGCATCATCCCTTTGGCTCCCA...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR CCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCAATGCTGTTGGTCCTaGGTGTGCACCACTTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSQCCWS*VCTTSG Trigger: CCCTGAAGTGGTGCACACCCAGGACCAACAGCATTG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR CCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCCGCTCTTCTTCTTCTaGGGGTTTGCTCCTACATGC | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSPLFFF*GFAPTC Trigger: GCATGTAGGAGCAAACCCCCAGAAGAAGAAGAGCGG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR CCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCGCCCAGCAAACTCCTaGTGCTTTCTGGAATTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSRPANS*CFLELA Trigger: TGCCAATTCCAGAAAGCACCAGGAGTTTGCTGGGCG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTTGGCTGCTAAGCATGTaGCTGATGACTTTGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSWLLSM*LMTLEP Trigger: AGGCTCCAAAGTCATCAGTCACATGCTTAGCAGCCA...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000203545.3 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCAGGTGAGTCCTTTATaGCCTCTGCTTCAGCCAACT | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSQVSPL*PLLQPT Trigger: AGTTGGCTGAAGCAGAGGTCATAAAGGACTCACCTG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGCTCTGCTCTGTTATTaGCAGAGTTCAAACGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSALLCY*QSSNAQ Trigger: CTGGGCGTTTGAACTCTGTCAATAACAGAGCAGAGC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR GCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCTGCCTACAGGATTCTaGCATGTATGGGCAGTGATC | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSLPTGF*HVWAVI Trigger: GATCACTGCCCATACATGGCAGAATCCTGTAGGCAG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR GCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCCAGCAAACTCCTGGTaGTTTCTGGAATTGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSPANSW*FLELAV Trigger: CACTGCCAATTCCAGAAAGCACCAGGAGTTTGCTGG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR CCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTAAAGGGATGATGCCTTaGGTCCTGTTCTTCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSKGMMP*VLFFTS Trigger: GCTGGTGAAGAACAGGACCCAAGGCATCATCCCTTT...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR CCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGCTCCACGTCATAGTTaGCAGATGTGTTGGCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSAPRHS*QMCWHA Trigger: AGCATGCCAACACATCTGCCAACTATGACGTGGAGC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR CCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGCAATTCAATGCTGTTaGTCCTGGGTGTGCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSAIQCC*SWVCTT Trigger: AGTGGTGCACACCCAGGACCAACAGCATTGAATTGC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGCCATGTATGGGCAGTaGTCCACAACAAACACTGTT | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSAMYGQ*STTNTV Trigger: AACAGTGTTTGTTGTGGATCACTGCCCATACATGGC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGTTCTGCATTCTCCATaGGTAAAGTGCGAGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSVLHSP*VKCEPH Trigger: ATGAGGCTCGCACTTTACTCATGGAGAATGCAGAAC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGTGTGCTTTTCTAACTaGTCCTTTGCACGCTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSVCFSN*SFARSN Trigger: GTTGGAGCGTGCAAAGGATCAGTTAGAAAAGCACAC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCACTCCAATACTCTCTaGTGCTTCTCAGAGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSHSNTL*CFSELL Trigger: CAGCAACTCTGAGAAGCATCAGAGAGTATTGGAGTG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTTTCTGGAGAATCAGGTaGGTCCTTTATGACCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSFWRIR*VLYDLC Trigger: GCAGAGGTCATAAAGGACTCACCTGATTCTCCAGAA...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR GCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTTCAAACTCCACATGCTaGCTACAGGATTCTGCCATG | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSSNSTC*LQDSAM Trigger: CATGGCAGAATCCTGTAGGCAGCATGTGGAGTTTGA...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR GCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTAAGGGTTTCCACTGCTaGAACAAGACCATGCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSKGFHC*NKTMQD Trigger: ATCCTGCATGGTCTTGTTGCAGCAGTGGAAACCCTT...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR GCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGCAGATGTGTTGGCATaGTGCTCTTCCTTCATAGGA | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSADVLA*CSSFIG Trigger: TCCTATGAAGGAAGAGCAGCATGCCAACACATCTGC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR GCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCTTCTTCTGGGGGTTTaGTCCTACATGCCATTAGAC | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSLLLGV*SYMPLD Trigger: GTCTAATGGCATGTAGGAGCAAACCCCCAGAAGAAG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR CCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTAAGTCCACAAGGATTTaGAGATGGGAGCCAAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSKSTRI*RWEPKG Trigger: TCCCTTTGGCTCCCATCTCCAAATCCTTGTGGACTT...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR CCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTTACTGTCTCCTTAAATaGCCCTTCTCTGCTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSYCLLK*PFSAAA Trigger: AGCAGCAGCAGAGAAGGGCCATTTAAGGAGACAGTA...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTATTTACATCCACAGGTaGAATCCGGTAAGCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSIYIHR*NPVSSS Trigger: ACTGGAGCTTACCGGATTTCACCTGTGGATGTAAAT...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000203545.3 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCTAGTTCATTCCACATaGTCCGGTACTGTTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSLVHST*SGTVHL Trigger: GAGATGAACAGTACCGGATCATGTGGAATGAACTAG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR GCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTATATCAAACTCCACATaGTGCCTACAGGATTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSISNST*CLQDSA Trigger: GGCAGAATCCTGTAGGCAGCATGTGGAGTTTGATAT...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR GCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGATGTGTTGGCATGCTaGTCTTCCTTCATAGGAATG | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSDVLAC*SSFIGM Trigger: CATTCCTATGAAGGAAGAGCAGCATGCCAACACATC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR GCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTAATAGTGCAATTCAATaGTGTTGGTCCTGGGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSNSAIQ*CWSWVC Trigger: GCACACCCAGGACCAACAGCATTGAATTGCACTATT...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR GCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTTCCGGTAAGCTCCAGTaGAATAGTGCAATTCAATGC | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSSGKLQ*NSAIQC Trigger: GCATTGAATTGCACTATTGCACTGGAGCTTACCGGA...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000203545.3 |
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| CDS-3UTR GCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGAACTGCTAAGGACATaGAGAAAGATCTCTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSELLRT*RKISPP Trigger: TGGAGGAGAGATCTTTCTGCATGTCCTTAGCAGTTC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000203545.3 |
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| CDS-3UTR CCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGGATTCTGCCATGTATaGGCAGTGATCCACAACAAA | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSGFCHV*AVIHNK Trigger: TTTGTTGTGGATCACTGCCCATACATGGCAGAATCC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR CCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGCTATCTTCACCAACTaGGTAGGTGTGAATCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSAIFTN*VGVNQD Trigger: GTCTTGATTCACACCTACCCAGTTGGTGAAGATAGC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR CCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCACTGTGGACTTCACTaGTCAAAACTGGGGACAATT | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSHCGLH*SKLGTI Trigger: AATTGTCCCCAGTTTTGACCAGTGAAGTCCACAGTG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR CCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTAAGGGGCTTTTTGTTTaGAGGTTCTGGAGAATCAGG | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSKGLFV*RFWRIR Trigger: CCTGATTCTCCAGAACCTCCAAACAAAAAGCCCCTT...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCATGGAAGATTCTACTaGGCAAGTCCACAAGGATTT | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSHGRFY*ASPQGF Trigger: AAATCCTTGTGGACTTGCTCAGTAGAATCTTCCATG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCACTTTTTGCATTTGTaGTGCAGATTATCCGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSHFLHL*CRLSVL Trigger: GAGGACGGATAATCTGCATCACAAATGCAAAAAGTG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCTGCATGAGATGATCTaGATTTGCAGCAAGCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSLHEMI*ICSKLV Trigger: AACAAGCTTGCTGCAAATTCAGATCATCTCATGCAG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGTTTGTGATGGTCGTTaGAGCCAAGTCAAAATGTTG | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSVCDGR*SQVKML Trigger: CAACATTTTGACTTGGCTTCAACGACCATCACAAAC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCTACCGCTTGCATGTTaGAAATGGTGGTTTGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSLPLAC*KWWFVK Trigger: TTTCACAAACCACCATTTTCAACATGCAAGCGGTAG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR GCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGTCCTTTATGACCTCTaGTTCAGCCAACTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSVLYDL*FSQLFF Trigger: AAAGAAGAGTTGGCTGAAGCAGAGGTCATAAAGGAC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGAAAATGGTGGTTTGTaGAATAATCATGGGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSENGGL*NNHGPV Trigger: TACTGGCCCATGATTATTTCACAAACCACCATTTTC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTAAGACTCTTTCACAATaGCACCAGCTAATGGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSKTLSQ*HQLMEL Trigger: TAGTTCCATTAGCTGGTGTCATTGTGAAAGAGTCTT...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000203545.3 |
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| CDS-3UTR GCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGTGTTGATACAGCTCTaGTCTGTTATTGACAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSVLIQL*SVIDRV Trigger: AACTCTGTCAATAACAGAGCAGAGCTGTATCAACAC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR CCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGGTGCTTTCTGGAATTaGCAGTGTTTATTCTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSGAFWN*QCLFCY Trigger: GTAACAGAATAAACACTGCCAATTCCAGAAAGCACC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR TCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTTTGTATATGGTCTTCTaGCAGTTTAACACATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSLYMVF*QFNTSS Trigger: AGAGGATGTGTTAAACTGTCAGAAGACCATATACAA...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR CCA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCATCGATTTTATATCTaGGGTCTAGAAAAGGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RGNTFYHKINCVVWEGKSHRFYI*GLEKEL Trigger: TAACTCCTTTTCTAGACCCCAGATATAAAATCGATG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS GCA 90 bp | TCTGTCTGCATCCGGCCGGGCCTTTTCCGTGCCGTGCTCCTTCCCTaGTTGTTCCGACTTGTCTTCCCTGTCCTCCCTCTTCCTCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SVCIRPGLFRAVLLP*LFRLVFPVLPLPPS Trigger: CGAGGGAGGAAGAGGGAGGACAGGGAAGACAAGTCGGAACAAGCAGGGAAGGAGCACGGCACGGAAAAGGCCCGGCCGGATGCAGACAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS GCA 90 bp | CTAAAATCCCTTTCAATCTGTCTGCATCCGGCCGGGCCTTTTCCGTaGCGTGCTCCTTCCCTGCTTGTTCCGACTTGTCTTCCCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LKSLSICLHPAGPFP*RAPSLLVPTCLPCP Trigger: AGGACAGGGAAGACAAGTCGGAACAAGCAGGGAAGGAGCACGGCACGGAAAAGGCCCGGCCGGATGCAGACAGATTGAAAGGGATTTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS TCA 90 bp | CTCTCCTCCATGGCTGCTAAGCATGTGACTGATGACTTTGGAGCCTaGCTTTCGTGGCTGCTCCAGCAACACAGACCGACCATTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSSMAAKHVTDDFGA*LSWLLQQHRPTIEE Trigger: CTCCTCAATGGTCGGTCTGTGTTGCTGGAGCAGCCACGAAAGTCAGGCTCCAAAGTCATCAGTCACATGCTTAGCAGCCATGGAGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 ENSMUST00000203545.3 |
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| CDS TCA 90 bp | CTAAGGACATGCAGAAAGATCTCTCCTCCATGGCTGCTAAGCATGTaGCTGATGACTTTGGAGCCTGACTTTCGTGGCTGCTCCAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LRTCRKISPPWLLSM*LMTLEPDFRGCSSN Trigger: GTTGCTGGAGCAGCCACGAAAGTCAGGCTCCAAAGTCATCAGTCACATGCTTAGCAGCCATGGAGGAGAGATCTTTCTGCATGTCCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 ENSMUST00000203545.3 |
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| CDS GCA 90 bp | CCACAGGTGAAATCCGGTAAGCTCCAGTGCAATAGTGCAATTCAATaGTGTTGGTCCTGGGTGTGCACCACTTCAGGGTTACTGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PQVKSGKLQCNSAIQ*CWSWVCTTSGLLSP Trigger: AGGAGACAGTAACCCTGAAGTGGTGCACACCCAGGACCAACAGCATTGAATTGCACTATTGCACTGGAGCTTACCGGATTTCACCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS CCA 90 bp | CAAGTCCACAAGGATTTGGAGATGGGAGCCAAAGGGATGATGCCTTaGGTCCTGTTCTTCACCAGCATATCAAACTCCACATGCTGCCTA | + |
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Preference number: 5 (lower is better) Translates to: QVHKDLEMGAKGMMP*VLFFTSISNSTCCL Trigger: TAGGCAGCATGTGGAGTTTGATATGCTGGTGAAGAACAGGACCCAAGGCATCATCCCTTTGGCTCCCATCTCCAAATCCTTGTGGACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS TCA 90 bp | CTACTGAGCAAGTCCACAAGGATTTGGAGATGGGAGCCAAAGGGATaGTGCCTTGGGTCCTGTTCTTCACCAGCATATCAAACTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: LLSKSTRIWRWEPKG*CLGSCSSPAYQTPH Trigger: ATGTGGAGTTTGATATGCTGGTGAAGAACAGGACCCAAGGCATCATCCCTTTGGCTCCCATCTCCAAATCCTTGTGGACTTGCTCAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS TCA 90 bp | TCTGGGGGTTTGCTCCTACATGCCATTAGACACTCCAATACTCTCTaGTGCTTCTCAGAGTTGCTGATATGGGCTCTGACGAGAGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGGLLLHAIRHSNTL*CFSELLIWALTRVS Trigger: AGAGACTCTCGTCAGAGCCCATATCAGCAACTCTGAGAAGCATCAGAGAGTATTGGAGTGTCTAATGGCATGTAGGAGCAAACCCCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS TCA 90 bp | CCTCCAGTCAGTCCAACCTCCTCACCATTTTCCTCCTTAAGGTGTTaGTACAGCTCTGCTCTGTTATTGACAGAGTTCAAACGCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PPVSPTSSPFSSLRC*YSSALLLTEFKRPA Trigger: TGCTGGGCGTTTGAACTCTGTCAATAACAGAGCAGAGCTGTATCAACACCTTAAGGAGGAAAATGGTGAGGAGGTTGGACTGACTGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR CAA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCCTGCTTGTTCCGACTaGTCTTCCCTGTCCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RGNTFYHKINCVVWEGKSPACSD*SSLSSL Trigger: GAGGGAGGACAGGGAAGACAAGTCGGAACAAGCAGG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS TCA 90 bp | TGTAATCCGGTAGTCTGTAACTCTTCCTCCACAGCCCTCACTAATTaGAGGCGGATCTTCCAGAATGGATCGAGAACTGCTAAGGACATG | + |
|
Preference number: 5 (lower is better) Translates to: CNPVVCNSSSTALTN*RRIFQNGSRTAKDM Trigger: CATGTCCTTAGCAGTTCTCGATCCATTCTGGAAGATCCGCCTTCAATTAGTGAGGGCTGTGGAGGAAGAGTTACAGACTACCGGATTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 ENSMUST00000203545.3 |
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| CDS TCA 90 bp | CGTTTCAACAAGGGGCTTTTTGTTTGGAGGTTCTGGAGAATCAGGTaGGTCCTTTATGACCTCTGCTTCAGCCAACTCTTCTTTCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RFNKGLFVWRFWRIR*VLYDLCFSQLFFPS Trigger: CGAGGGAAAGAAGAGTTGGCTGAAGCAGAGGTCATAAAGGACTCACCTGATTCTCCAGAACCTCCAAACAAAAAGCCCCTTGTTGAAACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS GCA 90 bp | TTCCCAACTCGTTCTGCATTCTCCATGAGTAAAGTGCGAGCCTCATaGTGGTATTCGGTAATCTTGCAAAGGGTTTCCACTGCTGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: FPTRSAFSMSKVRAS*WYSVILQRVSTAAT Trigger: TGTTGCAGCAGTGGAAACCCTTTGCAAGATTACCGAATACCAGCATGAGGCTCGCACTTTACTCATGGAGAATGCAGAACGAGTTGGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS GCA 90 bp | TCCAACCTCCTCACCATTTTCCTCCTTAAGGTGTTGATACAGCTCTaGTCTGTTATTGACAGAGTTCAAACGCCCAGCAAACTCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SNLLTIFLLKVLIQL*SVIDRVQTPSKLLV Trigger: CACCAGGAGTTTGCTGGGCGTTTGAACTCTGTCAATAACAGAGCAGAGCTGTATCAACACCTTAAGGAGGAAAATGGTGAGGAGGTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS CCA 90 bp | CCAACTCGTTCTGCATTCTCCATGAGTAAAGTGCGAGCCTCATGCTaGTATTCGGTAATCTTGCAAAGGGTTTCCACTGCTGCAACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PTRSAFSMSKVRASC*YSVILQRVSTAATR Trigger: TCTTGTTGCAGCAGTGGAAACCCTTTGCAAGATTACCGAATACCAGCATGAGGCTCGCACTTTACTCATGGAGAATGCAGAACGAGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS GCA 90 bp | AAGGTCTACTATTTACATCCACAGGTGAAATCCGGTAAGCTCCAGTaGAATAGTGCAATTCAATGCTGTTGGTCCTGGGTGTGCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: KVYYLHPQVKSGKLQ*NSAIQCCWSWVCTT Trigger: AGTGGTGCACACCCAGGACCAACAGCATTGAATTGCACTATTGCACTGGAGCTTACCGGATTTCACCTGTGGATGTAAATAGTAGACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS GCA 90 bp | TGTTGTCTCCATCCCATTTTCCTCCTTAAGGTGTTGATACAGCTCTaGTCTGTTATTGACAGAGTTCAAACGCCCAGCAAACTCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CCLHPIFLLKVLIQL*SVIDRVQTPSKLLV Trigger: CACCAGGAGTTTGCTGGGCGTTTGAACTCTGTCAATAACAGAGCAGAGCTGTATCAACACCTTAAGGAGGAAAATGGGATGGAGACAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR CAA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCAAGTCCACAAGGATTaGGAGATGGGAGCCAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RGNTFYHKINCVVWEGKSQVHKD*EMGAKG Trigger: CCCTTTGGCTCCCATCTCCAAATCCTTGTGGACTTG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR CAA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTTGCAATTCAATGCTGTaGGTCCTGGGTGTGCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: RGNTFYHKINCVVWEGKSCNSML*VLGVHH Trigger: GTGGTGCACACCCAGGACCAACAGCATTGAATTGCA...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS CCA 90 bp | AGCTCTGCTCTGTTATTGACAGAGTTCAAACGCCCAGCAAACTCCTaGTGCTTTCTGGAATTGGCAGTGTTTATTCTGTTACTCCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSALLLTEFKRPANS*CFLELAVFILLLHK Trigger: CTTGTGGAGTAACAGAATAAACACTGCCAATTCCAGAAAGCACCAGGAGTTTGCTGGGCGTTTGAACTCTGTCAATAACAGAGCAGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR CAA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTACTTTAAGAAAGGGATaGCAGTTCGGGGTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RGNTFYHKINCVVWEGKSTLRKG*QFGVLQ Trigger: CTGGAGGACCCCGAACTGCAATCCCTTTCTTAAAGT...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS GCA 90 bp | GTTCTTCACCAGCATATCAAACTCCACATGCTGCCTACAGGATTCTaGCATGTATGGGCAGTGATCCACAACAAACACTGTTTTATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VLHQHIKLHMLPTGF*HVWAVIHNKHCFMR Trigger: TCTCATAAAACAGTGTTTGTTGTGGATCACTGCCCATACATGGCAGAATCCTGTAGGCAGCATGTGGAGTTTGATATGCTGGTGAAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS GCA 90 bp | TCTGCTCTGTTATTGACAGAGTTCAAACGCCCAGCAAACTCCTGGTaGTTTCTGGAATTGGCAGTGTTTATTCTGTTACTCCACAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SALLLTEFKRPANSW*FLELAVFILLLHKD Trigger: ATCCTTGTGGAGTAACAGAATAAACACTGCCAATTCCAGAAAGCACCAGGAGTTTGCTGGGCGTTTGAACTCTGTCAATAACAGAGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR CAA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTACTAGAACATTCAACTaGGTAGCAAGATGCCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RGNTFYHKINCVVWEGKSTRTFN*VARCRP Trigger: TGGGCGGCATCTTGCTACCAAGTTGAATGTTCTAGT...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR CAA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTTTTCTAACTGATCCTTaGCACGCTCCAACGGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: RGNTFYHKINCVVWEGKSFLTDP*HAPTGS Trigger: AGATCCCGTTGGAGCGTGCAAAGGATCAGTTAGAAA...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR CAA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTTCTTCTTCTGGGGGTTaGCTCCTACATGCCATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RGNTFYHKINCVVWEGKSSSSGG*LLHAIR Trigger: TCTAATGGCATGTAGGAGCAAACCCCCAGAAGAAGA...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR CAA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCAAGGGGCTTTTTGTTaGGAGGTTCTGGAGAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: RGNTFYHKINCVVWEGKSQGAFC*EVLENQ Trigger: CTGATTCTCCAGAACCTCCAAACAAAAAGCCCCTTG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR CAA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTAGCTCTGCTCTGTTATaGACAGAGTTCAAACGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RGNTFYHKINCVVWEGKSSSALL*TEFKRP Trigger: TGGGCGTTTGAACTCTGTCAATAACAGAGCAGAGCT...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS GCA 90 bp | TTCATAGGAATGTTTGTGATGGTCGTTGAAGCCAAGTCAAAATGTTaGTGTACTAGAACATTCAACTTGGTAGCAAGATGCCGCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FIGMFVMVVEAKSKC*CTRTFNLVARCRPA Trigger: AGCTGGGCGGCATCTTGCTACCAAGTTGAATGTTCTAGTACAGCAACATTTTGACTTGGCTTCAACGACCATCACAAACATTCCTATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS-3UTR CAA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTAACACAGACCGACCATaGAGGAGGAAATTAGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGNTFYHKINCVVWEGKSNTDRP*RRKLVR Trigger: CCTTACTAATTTCCTCCTCAATGGTCGGTCTGTGTT...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000203545.3 |
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| CDS-3UTR CAA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTACTACCGCTTGCATGTaGAAAATGGTGGTTTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RGNTFYHKINCVVWEGKSTTACM*KMVVCE Trigger: TTCACAAACCACCATTTTCAACATGCAAGCGGTAGT...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS TCA 90 bp | ACTGTAGCTAGTGCTGCCATTAGCTCCTGTAAGTTTTGGTCTTCTTaGGTCCAAGAATTTAAAACATGTGCTCCCGAATCACTAACAATG | + |
|
Preference number: 5 (lower is better) Translates to: TVASAAISSCKFWSS*VQEFKTCAPESLTM Trigger: CATTGTTAGTGATTCGGGAGCACATGTTTTAAATTCTTGGACTCAAGAAGACCAAAACTTACAGGAGCTAATGGCAGCACTAGCTACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS TCA 90 bp | GAAATTAGTAAGGCAGGAAGAAGGTCTACTATTTACATCCACAGGTaGAATCCGGTAAGCTCCAGTGCAATAGTGCAATTCAATGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: EISKAGRRSTIYIHR*NPVSSSAIVQFNAV Trigger: AACAGCATTGAATTGCACTATTGCACTGGAGCTTACCGGATTTCACCTGTGGATGTAAATAGTAGACCTTCTTCCTGCCTTACTAATTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 ENSMUST00000203545.3 |
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| CDS-3UTR CAA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTGACCAACTCACATTTTaGAATCTGCATGAGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: RGNTFYHKINCVVWEGKSDQLTF*NLHEMI Trigger: GATCATCTCATGCAGATTCAAAAATGTGAGTTGGTC...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR CAA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTTGGTGCTTTCTGGAATaGGCAGTGTTTATTCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: RGNTFYHKINCVVWEGKSWCFLE*AVFILL Trigger: TAACAGAATAAACACTGCCAATTCCAGAAAGCACCA...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS-3UTR CAA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTCTTTCCCATTTTCTGTaGTCTCCATCCTATTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: RGNTFYHKINCVVWEGKSLSHFL*SPSYSQ Trigger: TTGTGAATAGGATGGAGACAACAGAAAATGGGAAAG...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS-3UTR CAA 90 bp | AGAGGGAACACCTTTTACCATAAAATAAACTGTGTGGTCTGGGAGGGCAAATCTTGTTATGCTCATGAATaGTTTCCTGGACACAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RGNTFYHKINCVVWEGKSCYAHE*FPGHNL Trigger: AAGATTGTGTCCAGGAAACAATTCATGAGCATAACA...AGATTTGCCCTCCCAGACCACACAGTTTATTTTATGGTAAAAGGTGTTCCCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS CCA 90 bp | CAGGAAGAGGGTCATTCTTCCTTTCCATATCAACTAAGTTGTATATaGTCTTCTGACAGTTTAACACATCCTCTTCTGTCAAAGACTCTT | + |
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Preference number: 5 (lower is better) Translates to: QEEGHSSFPYQLSCI*SSDSLTHPLLSKTL Trigger: AAGAGTCTTTGACAGAAGAGGATGTGTTAAACTGTCAGAAGACCATATACAACTTAGTTGATATGGAAAGGAAGAATGACCCTCTTCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS CAA 72 bp | CGGCCGGGCCTTTTCCGTGCCGTGCTCCTTCCCTGCTaGTTCCGACTTGTCTTCCCTGTCCTCCCTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: RPGLFRAVLLPC*FRLVFPVLPLP Trigger: AGGAAGAGGGAGGACAGGGAAGACAAGTCGGAACAAGCAGGGAAGGAGCACGGCACGGAAAAGGCCCGGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS GCA 72 bp | ATCCGGCCGGGCCTTTTCCGTGCCGTGCTCCTTCCCTaGTTGTTCCGACTTGTCTTCCCTGTCCTCCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: IRPGLFRAVLLP*LFRLVFPVLPL Trigger: AAGAGGGAGGACAGGGAAGACAAGTCGGAACAAGCAGGGAAGGAGCACGGCACGGAAAAGGCCCGGCCGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS GCA 72 bp | AATCTGTCTGCATCCGGCCGGGCCTTTTCCGTGCCGTaGTCCTTCCCTGCTTGTTCCGACTTGTCTTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: NLSASGRAFSVP*SFPACSDLSSL Trigger: CAGGGAAGACAAGTCGGAACAAGCAGGGAAGGAGCACGGCACGGAAAAGGCCCGGCCGGATGCAGACAGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS CCA 72 bp | TGCTGCAACAAGACCATGCAGGATGCTGCAGCACTCTaGATCTGCCCGAGGGTTAGGAGGCCCCACTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: CCNKTMQDAAAL*ICPRVRRPHCS Trigger: GCTACAGTGGGGCCTCCTAACCCTCGGGCAGATCCAGAGTGCTGCAGCATCCTGCATGGTCTTGTTGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS CCA 72 bp | GGGTGTGCACCACTTCAGGGTTACTGTCTCCTTAAATaGCCCTTCTCTGCTGCTGCTCCCAGAGTGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: GCAPLQGYCLLK*PFSAAAPRVAV Trigger: GACAGCCACTCTGGGAGCAGCAGCAGAGAAGGGCCATTTAAGGAGACAGTAACCCTGAAGTGGTGCACACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS TCA 72 bp | ATGGCTGCTAAGCATGTGACTGATGACTTTGGAGCCTaGCTTTCGTGGCTGCTCCAGCAACACAGACCGACC | + |
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Preference number: 6 (lower is better) Translates to: MAAKHVTDDFGA*LSWLLQQHRPT Trigger: GGTCGGTCTGTGTTGCTGGAGCAGCCACGAAAGTCAGGCTCCAAAGTCATCAGTCACATGCTTAGCAGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 ENSMUST00000203545.3 |
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| CDS CAA 72 bp | TCACAACAGGAGAACGTGGGCACTTTAAGAAAGGGATaGCAGTTCGGGGTCCTCCAGTCAGTCCAACCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SQQENVGTLRKG*QFGVLQSVQPP Trigger: AGGAGGTTGGACTGACTGGAGGACCCCGAACTGCAATCCCTTTCTTAAAGTGCCCACGTTCTCCTGTTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS CAA 90 bp | GCAAGTCCACAAGGATTTGGAGATGGGAGCCAAAGGGATGATGCCTaGGGTCCTGTTCTTCACCAGCATATCAAACTCCACATGCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: ASPQGFGDGSQRDDA*GPVLHQHIKLHMLP Trigger: AGGCAGCATGTGGAGTTTGATATGCTGGTGAAGAACAGGACCCAAGGCATCATCCCTTTGGCTCCCATCTCCAAATCCTTGTGGACTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS TCA 72 bp | TGCAGAAAGATCTCTCCTCCATGGCTGCTAAGCATGTaGCTGATGACTTTGGAGCCTGACTTTCGTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: CRKISPPWLLSM*LMTLEPDFRGC Trigger: GCAGCCACGAAAGTCAGGCTCCAAAGTCATCAGTCACATGCTTAGCAGCCATGGAGGAGAGATCTTTCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 ENSMUST00000203545.3 |
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| CDS GCA 72 bp | TGTTGCTGTACTAGAACATTCAACTTGGTAGCAAGATaGCGCCCAGCTCGGACACTGTGGACTTCACTGGTC | + |
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Preference number: 6 (lower is better) Translates to: CCCTRTFNLVAR*RPARTLWTSLV Trigger: GACCAGTGAAGTCCACAGTGTCCGAGCTGGGCGGCATCTTGCTACCAAGTTGAATGTTCTAGTACAGCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS CAA 72 bp | CTCCCTCGCTTCTTCCGCTCTTCTTCTTCTGGGGGTTaGCTCCTACATGCCATTAGACACTCCAATACTCTC | + |
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Preference number: 6 (lower is better) Translates to: LPRFFRSSSSGG*LLHAIRHSNTL Trigger: GAGAGTATTGGAGTGTCTAATGGCATGTAGGAGCAAACCCCCAGAAGAAGAAGAGCGGAAGAAGCGAGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS CAA 90 bp | CCATCCTATTCACAACAGGAGAACGTGGGCACTTTAAGAAAGGGATaGCAGTTCGGGGTCCTCCAGTCAGTCCAACCTCCTCACCATTTT | + |
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Preference number: 6 (lower is better) Translates to: PSYSQQENVGTLRKG*QFGVLQSVQPPHHF Trigger: AAAATGGTGAGGAGGTTGGACTGACTGGAGGACCCCGAACTGCAATCCCTTTCTTAAAGTGCCCACGTTCTCCTGTTGTGAATAGGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS GCA 72 bp | TCCCTCGCTTCTTCCGCTCTTCTTCTTCTGGGGGTTTaGTCCTACATGCCATTAGACACTCCAATACTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SLASSALLLLGV*SYMPLDTPILS Trigger: AGAGAGTATTGGAGTGTCTAATGGCATGTAGGAGCAAACCCCCAGAAGAAGAAGAGCGGAAGAAGCGAGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS CCA 72 bp | AACTTGGTAGCAAGATGCCGCCCAGCTCGGACACTGTaGACTTCACTGGTCAAAACTGGGGACAATTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: NLVARCRPARTL*TSLVKTGDNSF Trigger: AAAAGAATTGTCCCCAGTTTTGACCAGTGAAGTCCACAGTGTCCGAGCTGGGCGGCATCTTGCTACCAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS CCA 72 bp | GGTAAGCTCCAGTGCAATAGTGCAATTCAATGCTGTTaGTCCTGGGTGTGCACCACTTCAGGGTTACTGTCT | + |
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Preference number: 6 (lower is better) Translates to: GKLQCNSAIQCC*SWVCTTSGLLS Trigger: AGACAGTAACCCTGAAGTGGTGCACACCCAGGACCAACAGCATTGAATTGCACTATTGCACTGGAGCTTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS CAA 72 bp | CAAGGATTTGGAGATGGGAGCCAAAGGGATGATGCCTaGGGTCCTGTTCTTCACCAGCATATCAAACTCCAC | + |
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Preference number: 6 (lower is better) Translates to: QGFGDGSQRDDA*GPVLHQHIKLH Trigger: GTGGAGTTTGATATGCTGGTGAAGAACAGGACCCAAGGCATCATCCCTTTGGCTCCCATCTCCAAATCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS CAA 90 bp | TTCTCCATGAGTAAAGTGCGAGCCTCATGCTGGTATTCGGTAATCTaGCAAAGGGTTTCCACTGCTGCAACAAGACCATGCAGGATGCTG | + |
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Preference number: 6 (lower is better) Translates to: FSMSKVRASCWYSVI*QRVSTAATRPCRML Trigger: CAGCATCCTGCATGGTCTTGTTGCAGCAGTGGAAACCCTTTGCAAGATTACCGAATACCAGCATGAGGCTCGCACTTTACTCATGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS CAA 90 bp | TCCTCCAGTCAGTCCAACCTCCTCACCATTTTCCTCCTTAAGGTGTaGATACAGCTCTGCTCTGTTATTGACAGAGTTCAAACGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSSQSNLLTIFLLKV*IQLCSVIDRVQTPS Trigger: GCTGGGCGTTTGAACTCTGTCAATAACAGAGCAGAGCTGTATCAACACCTTAAGGAGGAAAATGGTGAGGAGGTTGGACTGACTGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS CCA 72 bp | AAGGATTTGGAGATGGGAGCCAAAGGGATGATGCCTTaGGTCCTGTTCTTCACCAGCATATCAAACTCCACA | + |
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Preference number: 6 (lower is better) Translates to: KDLEMGAKGMMP*VLFFTSISNST Trigger: TGTGGAGTTTGATATGCTGGTGAAGAACAGGACCCAAGGCATCATCCCTTTGGCTCCCATCTCCAAATCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS CAA 72 bp | AGTAAAGTGCGAGCCTCATGCTGGTATTCGGTAATCTaGCAAAGGGTTTCCACTGCTGCAACAAGACCATGC | + |
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Preference number: 6 (lower is better) Translates to: SKVRASCWYSVI*QRVSTAATRPC Trigger: GCATGGTCTTGTTGCAGCAGTGGAAACCCTTTGCAAGATTACCGAATACCAGCATGAGGCTCGCACTTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS TCA 72 bp | TTGCTCCTACATGCCATTAGACACTCCAATACTCTCTaGTGCTTCTCAGAGTTGCTGATATGGGCTCTGACG | + |
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Preference number: 6 (lower is better) Translates to: LLLHAIRHSNTL*CFSELLIWALT Trigger: CGTCAGAGCCCATATCAGCAACTCTGAGAAGCATCAGAGAGTATTGGAGTGTCTAATGGCATGTAGGAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS GCA 72 bp | CAGCATATCAAACTCCACATGCTGCCTACAGGATTCTaGCATGTATGGGCAGTGATCCACAACAAACACTGT | + |
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Preference number: 6 (lower is better) Translates to: QHIKLHMLPTGF*HVWAVIHNKHC Trigger: ACAGTGTTTGTTGTGGATCACTGCCCATACATGGCAGAATCCTGTAGGCAGCATGTGGAGTTTGATATGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS GCA 72 bp | CGTTCTGCATTCTCCATGAGTAAAGTGCGAGCCTCATaGTGGTATTCGGTAATCTTGCAAAGGGTTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: RSAFSMSKVRAS*WYSVILQRVST Trigger: AGTGGAAACCCTTTGCAAGATTACCGAATACCAGCATGAGGCTCGCACTTTACTCATGGAGAATGCAGAACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS CCA 72 bp | TCTGCATTCTCCATGAGTAAAGTGCGAGCCTCATGCTaGTATTCGGTAATCTTGCAAAGGGTTTCCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: SAFSMSKVRASC*YSVILQRVSTA Trigger: AGCAGTGGAAACCCTTTGCAAGATTACCGAATACCAGCATGAGGCTCGCACTTTACTCATGGAGAATGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS CCA 72 bp | GTGCATCTTTGTGATGAAGTAGCTCCACGTCATAGTTaGCAGATGTGTTGGCATGCTGCTCTTCCTGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: VHLCDEVAPRHS*QMCWHAALPVQ Trigger: TTGAACAGGAAGAGCAGCATGCCAACACATCTGCCAACTATGACGTGGAGCTACTTCATCACAAAGATGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131662.2 |
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| CDS GCA 72 bp | TATTTACATCCACAGGTGAAATCCGGTAAGCTCCAGTaGAATAGTGCAATTCAATGCTGTTGGTCCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: YLHPQVKSGKLQ*NSAIQCCWSWV Trigger: CACCCAGGACCAACAGCATTGAATTGCACTATTGCACTGGAGCTTACCGGATTTCACCTGTGGATGTAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS TCA 72 bp | AAGGCAGGAAGAAGGTCTACTATTTACATCCACAGGTaGAATCCGGTAAGCTCCAGTGCAATAGTGCAATTC | + |
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Preference number: 6 (lower is better) Translates to: KAGRRSTIYIHR*NPVSSSAIVQF Trigger: GAATTGCACTATTGCACTGGAGCTTACCGGATTTCACCTGTGGATGTAAATAGTAGACCTTCTTCCTGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 ENSMUST00000203545.3 |
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| CDS TCA 72 bp | TGGAACTACCGCTTGCATGTTGAAAATGGTGGTTTGTaGAATAATCATGGGCCAGTAACGGGTGTGCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: WNYRLHVENGGL*NNHGPVTGVLF Trigger: GAAAAGCACACCCGTTACTGGCCCATGATTATTTCACAAACCACCATTTTCAACATGCAAGCGGTAGTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS GCA 72 bp | CATCCCATTTTCCTCCTTAAGGTGTTGATACAGCTCTaGTCTGTTATTGACAGAGTTCAAACGCCCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: HPIFLLKVLIQL*SVIDRVQTPSK Trigger: TTTGCTGGGCGTTTGAACTCTGTCAATAACAGAGCAGAGCTGTATCAACACCTTAAGGAGGAAAATGGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS CCA 72 bp | AAACTCCACATGCTGCCTACAGGATTCTGCCATGTATaGGCAGTGATCCACAACAAACACTGTTTTATGAGA | + |
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Preference number: 6 (lower is better) Translates to: KLHMLPTGFCHV*AVIHNKHCFMR Trigger: TCTCATAAAACAGTGTTTGTTGTGGATCACTGCCCATACATGGCAGAATCCTGTAGGCAGCATGTGGAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS CCA 72 bp | TTTAGGACGGTCAGACACAAGGCTATCTTCACCAACTaGGTAGGTGTGAATCAAGACCAACTCACATTTTTG | + |
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Preference number: 6 (lower is better) Translates to: FRTVRHKAIFTN*VGVNQDQLTFL Trigger: CAAAAATGTGAGTTGGTCTTGATTCACACCTACCCAGTTGGTGAAGATAGCCTTGTGTCTGACCGTCCTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS TCA 72 bp | CGAGCATTCGGACATGACTATCACTTTTTGCATTTGTaGTGCAGATTATCCGTCCTCTATTCCCAACTCGTT | + |
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Preference number: 6 (lower is better) Translates to: RAFGHDYHFLHL*CRLSVLYSQLV Trigger: AACGAGTTGGGAATAGAGGACGGATAATCTGCATCACAAATGCAAAAAGTGATAGTCATGTCCGAATGCTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS TCA 72 bp | AGTCCAACCTCCTCACCATTTTCCTCCTTAAGGTGTTaGTACAGCTCTGCTCTGTTATTGACAGAGTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SPTSSPFSSLRC*YSSALLLTEFK Trigger: TTTGAACTCTGTCAATAACAGAGCAGAGCTGTATCAACACCTTAAGGAGGAAAATGGTGAGGAGGTTGGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS GCA 72 bp | TTATTGACAGAGTTCAAACGCCCAGCAAACTCCTGGTaGTTTCTGGAATTGGCAGTGTTTATTCTGTTACTC | + |
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Preference number: 6 (lower is better) Translates to: LLTEFKRPANSW*FLELAVFILLL Trigger: GAGTAACAGAATAAACACTGCCAATTCCAGAAAGCACCAGGAGTTTGCTGGGCGTTTGAACTCTGTCAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS CCA 72 bp | CTGTTATTGACAGAGTTCAAACGCCCAGCAAACTCCTaGTGCTTTCTGGAATTGGCAGTGTTTATTCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: LLLTEFKRPANS*CFLELAVFILL Trigger: TAACAGAATAAACACTGCCAATTCCAGAAAGCACCAGGAGTTTGCTGGGCGTTTGAACTCTGTCAATAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS CAA 72 bp | ACAATGACACCAGCTAATGGAACTACCGCTTGCATGTaGAAAATGGTGGTTTGTGAAATAATCATGGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: TMTPANGTTACM*KMVVCEIIMGQ Trigger: CTGGCCCATGATTATTTCACAAACCACCATTTTCAACATGCAAGCGGTAGTTCCATTAGCTGGTGTCATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032427.15 |
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| CDS TCA 72 bp | AGTGCTGCCATTAGCTCCTGTAAGTTTTGGTCTTCTTaGGTCCAAGAATTTAAAACATGTGCTCCCGAATCA | + |
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Preference number: 6 (lower is better) Translates to: SAAISSCKFWSS*VQEFKTCAPES Trigger: TGATTCGGGAGCACATGTTTTAAATTCTTGGACTCAAGAAGACCAAAACTTACAGGAGCTAATGGCAGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032427.15 ENSMUST00000131662.2 |
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| CDS TCA 72 bp | TCTGTTGTCTCCATCCCATTTTCCTCCTTAAGGTGTTaGTACAGCTCTGCTCTGTTATTGACAGAGTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SVVSIPFSSLRC*YSSALLLTEFK Trigger: TTTGAACTCTGTCAATAACAGAGCAGAGCTGTATCAACACCTTAAGGAGGAAAATGGGATGGAGACAACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139979.8 ENSMUST00000203545.3 |
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| CDS CCA 72 bp | GGTCATTCTTCCTTTCCATATCAACTAAGTTGTATATaGTCTTCTGACAGTTTAACACATCCTCTTCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: GHSSFPYQLSCI*SSDSLTHPLLS Trigger: TGACAGAAGAGGATGTGTTAAACTGTCAGAAGACCATATACAACTTAGTTGATATGGAAAGGAAGAATGACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032427.15 ENSMUST00000139979.8 ENSMUST00000203545.3 |
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