RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INSYN2B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000069911

Ensembl transcript IDs: ENSMUST00000093192.4, ENSMUST00000165963.9

Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCCTCTTCCTGCACTGCACAACACAGGCTTATTTCTGTACCTTTaGGGTCGAGGATCTCAGGGTAGGAAGGAAATGCTTGCTGCCAGG +
Preference number: 1 (lower is better)
Translates to: PPLPALHNTGLFLYL*GRGSQGRKEMLAAR
Trigger: CCTGGCAGCAAGCATTTCCTTCCTACCCTGAGATCCTCGACCCCAAAGGTACAGAAATAAGCCTGTGTTGTGCAGTGCAGGAAGAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR TCA 90 bp GGTAGGAAGGAAATGCTTGCTGCCAGGGAAGTGGTGGGAGTGCAGTaGGCATTAGCATATGGTGGGAATCTGAGCTTAGCAGATGAGGAC +
Preference number: 1 (lower is better)
Translates to: GRKEMLAAREVVGVQ*ALAYGGNLSLADED
Trigger: GTCCTCATCTGCTAAGCTCAGATTCCCACCATATGCTAATGCTCACTGCACTCCCACCACTTCCCTGGCAGCAAGCATTTCCTTCCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR CCA 90 bp AGGGAGGTGAAATTGTTGGAGGTGGTTTGCTCAATTAGCCTCAATTaGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCAC +
Preference number: 1 (lower is better)
Translates to: REVKLLEVVCSISLN*QWAYAHPTYTAETH
Trigger: GTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCAATTGAGGCTAATTGAGCAAACCACCTCCAACAATTTCACCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR CCA 90 bp GTGAAATTGTTGGAGGTGGTTTGCTCAATTAGCCTCAATTGGCAGTaGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGAC +
Preference number: 1 (lower is better)
Translates to: VKLLEVVCSISLNWQ*AYAHPTYTAETHSD
Trigger: GTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCAATTGAGGCTAATTGAGCAAACCACCTCCAACAATTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR CCA 90 bp TTAAGTGTGGCTCACATTTCTGGCAGTGTCAGTCCAATCACAGGCTaGCAGAACACAGAACTGAATGCAGAGGTATCCAAGCCTTGCCTC +
Preference number: 1 (lower is better)
Translates to: LSVAHISGSVSPITG*QNTELNAEVSKPCL
Trigger: GAGGCAAGGCTTGGATACCTCTGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAATGTGAGCCACACTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR GCA 90 bp AGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTaGGATGTGGTGTTGTGCTTTGGTATAAAATCACGTGACCTGGGT +
Preference number: 1 (lower is better)
Translates to: RRNLLSRYRLVWPKQ*DVVLCFGIKSRDLG
Trigger: ACCCAGGTCACGTGATTTTATACCAAAGCACAACACCACATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR GCA 90 bp GGAGGCATAGTCATTCTTCTGCCCAGTCAAGAAAGGACACAATTATaGCATCTTCTCCAGGTTAGTGAAAAAGGCTATTCTATTTCCCCG +
Preference number: 1 (lower is better)
Translates to: GGIVILLPSQERTQL*HLLQVSEKGYSISP
Trigger: CGGGGAAATAGAATAGCCTTTTTCACTAACCTGGAGAAGATGGCATAATTGTGTCCTTTCTTGACTGGGCAGAAGAATGACTATGCCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR CCA 90 bp GATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTaGCCTAAGCAGTGCGATGTGGTGTTGTGCTTTGGTATAAAATCA +
Preference number: 1 (lower is better)
Translates to: DSITRRNLLSRYRLV*PKQCDVVLCFGIKS
Trigger: TGATTTTATACCAAAGCACAACACCACATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CCA 90 bp TGGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGACACCCAGGTGACCGATACCTaGTCACCAGGAAGGGTAACT +
Preference number: 2 (lower is better)
Translates to: WQWAYAHPTYTAETHSDTQVTDT*SPGRVT
Trigger: AGTTACCCTTCCTGGTGACCAGGTATCGGTCACCTG...GGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR TCA 90 bp AATTGGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGACTCTGAGCTTAGCAGATaGGGACGAAGCCTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: NWQWAYAHPTYTAETHSDSELSR*GRSLAV
Trigger: CACAGCCAGGCTTCGTCCTCATCTGCTAAGCTCAGA...GTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR GCA 90 bp AATTGGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGACGAAGGAAATGCTTGCTaGCAGGGAAGTGGTGGGAGT +
Preference number: 2 (lower is better)
Translates to: NWQWAYAHPTYTAETHSDEGNAC*QGSGGS
Trigger: ACTCCCACCACTTCCCTGGCAGCAAGCATTTCCTTC...GTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR GCA 90 bp TGGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGACACCACTGCTTTGGGAGTTTaGTTGGCATGCAAGCTTGAC +
Preference number: 2 (lower is better)
Translates to: WQWAYAHPTYTAETHSDTTALGV*LACKLD
Trigger: GTCAAGCTTGCATGCCAAGCAAACTCCCAAAGCAGT...GGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR GCA 90 bp ACCCCACGTACACAGCAGAGACTCACTCAGACACCGGGTCTTTGGCAAGGGGGCGGCATTGTTAGGCTCTaGTCATTTCTGTTGTGCTTT +
Preference number: 2 (lower is better)
Translates to: TPRTQQRLTQTPGLWQGGGIVRL*SFLLCF
Trigger: AAAGCACAACAGAAATGAGCAGAGCCTAACAATGCC...GCCCCCTTGCCAAAGACCCGGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CCA 90 bp ACCCCACGTACACAGCAGAGACTCACTCAGACACCGGGTCTTTGGCAAGGGGGCAGCATTAGCATATGGTaGGAATCTGAGCTTAGCAGA +
Preference number: 2 (lower is better)
Translates to: TPRTQQRLTQTPGLWQGGSISIW*ESELSR
Trigger: TCTGCTAAGCTCAGATTCCCACCATATGCTAATGCT...GCCCCCTTGCCAAAGACCCGGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR GCA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCACTCGGCCTGCGCTTTTaGAGAGGATCGGGGATGTCT +
Preference number: 2 (lower is better)
Translates to: ISGSVSPITGWQNTELNALGLRF*RGSGMS
Trigger: AGACATCCCCGATCCTCTGCAAAAGCGCAGGCCGAG...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR GCA 90 bp CACACTGCTTTGGGAGTTTGCTTGGCATGCAAGCTTGACCGGACATCCATGAGTCAACCCTCCTCTTCCTaGACTGCACAACACAGGCTT +
Preference number: 2 (lower is better)
Translates to: HTALGVCLACKLDRTSMSQPSSS*TAQHRL
Trigger: AAGCCTGTGTTGTGCAGTGCAGGAAGAGGAGGGTTG...ACTCATGGATGTCCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAGCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR TCA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCATCTGAGCTTAGCAGATaGGGACGAAGCCTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: ISGSVSPITGWQNTELNASELSR*GRSLAV
Trigger: CACAGCCAGGCTTCGTCCTCATCTGCTAAGCTCAGA...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR GCA 90 bp GCAGAACACAGAACTGAATGCAGAGGTATCCAAGCCTTGCCTCCTCTTCAGCCCACTGCTTTGGGAGTTTaGTTGGCATGCAAGCTTGAC +
Preference number: 2 (lower is better)
Translates to: AEHRTECRGIQALPPLQPTALGV*LACKLD
Trigger: GTCAAGCTTGCATGCCAAGCAAACTCCCAAAGCAGT...GGGCTGAAGAGGAGGCAAGGCTTGGATACCTCTGCATTCAGTTCTGTGTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR GCA 90 bp CCTTACAGTGATACATTGTCTTCAAGAAGGCGCTCTACAGATGAGCTGGCATTACTCGGCCTGCGCTTTTaGAGAGGATCGGGGATGTCT +
Preference number: 2 (lower is better)
Translates to: PYSDTLSSRRRSTDELALLGLRF*RGSGMS
Trigger: AGACATCCCCGATCCTCTGCAAAAGCGCAGGCCGAG...TAATGCCAGCTCATCTGTAGAGCGCCTTCTTGAAGACAATGTATCACTGTAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR GCA 90 bp AGGTATCCAAGCCTTGCCTCCTCTTCAGCCCCAGTAGGTAGCAATTACTTAATCAGGGTAGGAAGGAAATaGTTGCTGCCAGGGAAGTGG +
Preference number: 2 (lower is better)
Translates to: RYPSLASSSAPVGSNYLIRVGRK*LLPGKW
Trigger: CCACTTCCCTGGCAGCAAGCATTTCCTTCCTACCCT...GATTAAGTAATTGCTACCTACTGGGGCTGAAGAGGAGGCAAGGCTTGGATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CCA 90 bp GCAGAACACAGAACTGAATGCAGAGGTATCCAAGCCTTGCCTCCTCTTCAGCCCAGCATTAGCATATGGTaGGAATCTGAGCTTAGCAGA +
Preference number: 2 (lower is better)
Translates to: AEHRTECRGIQALPPLQPSISIW*ESELSR
Trigger: TCTGCTAAGCTCAGATTCCCACCATATGCTAATGCT...GGGCTGAAGAGGAGGCAAGGCTTGGATACCTCTGCATTCAGTTCTGTGTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CCA 90 bp CACACTGCTTTGGGAGTTTGCTTGGCATGCAAGCTTGACCGGACATCCATGAGTTTATTTCTGTACCTTTaGGGTCGAGGATCTCAGGGT +
Preference number: 2 (lower is better)
Translates to: HTALGVCLACKLDRTSMSLFLYL*GRGSQG
Trigger: ACCCTGAGATCCTCGACCCCAAAGGTACAGAAATAA...ACTCATGGATGTCCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAGCAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR CAA 90 bp GACCGATACCTGGTCACCAGGAAGGGTAACTGTAGAGTAGCATGTTaGGGCCTATCTACATGGTTGTCACAAGATGCATGGATGAGGAAA +
Preference number: 2 (lower is better)
Translates to: DRYLVTRKGNCRVAC*GLSTWLSQDAWMRK
Trigger: TTTCCTCATCCATGCATCTTGTGACAACCATGTAGATAGGCCCAAACATGCTACTCTACAGTTACCCTTCCTGGTGACCAGGTATCGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR GCA 90 bp TATTGTGTGATGTTTTCTAGGATACTTGCTCACAACCCTCCTCTTCCTGCACTGGAAGGAAATGCTTGCTaGCAGGGAAGTGGTGGGAGT +
Preference number: 2 (lower is better)
Translates to: YCVMFSRILAHNPPLPALEGNAC*QGSGGS
Trigger: ACTCCCACCACTTCCCTGGCAGCAAGCATTTCCTTC...CAGTGCAGGAAGAGGAGGGTTGTGAGCAAGTATCCTAGAAAACATCACACAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR GCA 90 bp ACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTGCGATCTCCTCTTCCTGCACTaGACAACACAGGCTTATTTC +
Preference number: 2 (lower is better)
Translates to: TRRNLLSRYRLVWPKQCDLLFLH*TTQAYF
Trigger: GAAATAAGCCTGTGTTGTGCAGTGCAGGAAGAGGAG...ATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR GCA 90 bp CACTGCTGGGGCCAACTGAGAGTTGAGTGTGTGGATACAGAAAGAAAGATCTGTCTCCTCTTCCTGCACTaGACAACACAGGCTTATTTC +
Preference number: 2 (lower is better)
Translates to: HCWGQLRVECVDTERKICLLFLH*TTQAYF
Trigger: GAAATAAGCCTGTGTTGTGCAGTGCAGGAAGAGGAG...ACAGATCTTTCTTTCTGTATCCACACACTCAACTCTCAGTTGGCCCCAGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR GCA 90 bp ACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTGCGATTGGGCAACCTTACTCTaGCACACCCCATACTTTACA +
Preference number: 2 (lower is better)
Translates to: TRRNLLSRYRLVWPKQCDWATLL*HTPYFT
Trigger: TGTAAAGTATGGGGTGTGGCAGAGTAAGGTTGCCCA...ATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR TCA 90 bp CCTTACAGTGATACATTGTCTTCAAGAAGGCGCTCTACAGATGAGCTGGCATTAGGGCCAACTGAGAGTTaGGTGTGTGGATACAGAAAG +
Preference number: 2 (lower is better)
Translates to: PYSDTLSSRRRSTDELALGPTES*VCGYRK
Trigger: CTTTCTGTATCCACACACTCAACTCTCAGTTGGCCC...TAATGCCAGCTCATCTGTAGAGCGCCTTCTTGAAGACAATGTATCACTGTAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR GCA 90 bp ACTGATGCTCAGGATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTACAACCCTCCTCTTCCTaGACTGCACAACACAGGCTT +
Preference number: 2 (lower is better)
Translates to: TDAQDSITRRNLLSRYRLQPSSS*TAQHRL
Trigger: AAGCCTGTGTTGTGCAGTGCAGGAAGAGGAGGGTTG...TAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATCCTGAGCATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR GCA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCAGGCATTGTTAGGCTCTaGTCATTTCTGTTGTGCTTT +
Preference number: 2 (lower is better)
Translates to: ISGSVSPITGWQNTELNAGIVRL*SFLLCF
Trigger: AAAGCACAACAGAAATGAGCAGAGCCTAACAATGCC...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CCA 90 bp ACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTGCGATTTAATCACACTGCTTTaGGAGTTTGCTTGGCATGCA +
Preference number: 2 (lower is better)
Translates to: TRRNLLSRYRLVWPKQCDLITLL*EFAWHA
Trigger: TGCATGCCAAGCAAACTCCCAAAGCAGTGTGATTAA...ATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CCA 90 bp ACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTGCGATAGAAAGAAAGATCTGTaGCTTTTGGCCAGTGGTAAC +
Preference number: 2 (lower is better)
Translates to: TRRNLLSRYRLVWPKQCDRKKDL*LLASGN
Trigger: GTTACCACTGGCCAAAAGCCACAGATCTTTCTTTCT...ATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR TCA 90 bp ACTGATGCTCAGGATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGGCAGAACACAGAACTaGATGCAGAGGTATCCAAGC +
Preference number: 2 (lower is better)
Translates to: TDAQDSITRRNLLSRYRLGRTQN*MQRYPS
Trigger: GCTTGGATACCTCTGCATTCAGTTCTGTGTTCTGCC...TAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATCCTGAGCATCAGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR GCA 90 bp AGGTATCCAAGCCTTGCCTCCTCTTCAGCCCCAGTAGGTAGCAATTACTTAATCTGCTCATTTCTGTTGTaGTTTTGGTACGGTAAATCC +
Preference number: 2 (lower is better)
Translates to: RYPSLASSSAPVGSNYLICSFLL*FWYGKS
Trigger: GGATTTACCGTACCAAAAGCACAACAGAAATGAGCA...GATTAAGTAATTGCTACCTACTGGGGCTGAAGAGGAGGCAAGGCTTGGATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CCA 90 bp ATCTTAAGAAGCTCAAACTTTGTGGAAGAAGGCGCTTCCATCCTCATTCTCGGTTTATTTCTGTACCTTTaGGGTCGAGGATCTCAGGGT +
Preference number: 2 (lower is better)
Translates to: ILRSSNFVEEGASILILGLFLYL*GRGSQG
Trigger: ACCCTGAGATCCTCGACCCCAAAGGTACAGAAATAA...ACCGAGAATGAGGATGGAAGCGCCTTCTTCCACAAAGTTTGAGCTTCTTAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CCA 90 bp ACTGATGCTCAGGATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTACTTTGGGAGTTTGCTTaGCATGCAAGCTTGACCGGA +
Preference number: 2 (lower is better)
Translates to: TDAQDSITRRNLLSRYRLLWEFA*HASLTG
Trigger: TCCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAG...TAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATCCTGAGCATCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR TCA 90 bp ACTGATGCTCAGGATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTATTTCCTCACTCTCCCTaGAATAGCTTTTGCACCGCA +
Preference number: 2 (lower is better)
Translates to: TDAQDSITRRNLLSRYRLFPHSP*NSFCTA
Trigger: TGCGGTGCAAAAGCTATTTCAGGGAGAGTGAGGAAA...TAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATCCTGAGCATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR GCA 90 bp GTCATTCTTCTGCCCAGTCAAGAAAGGACACAATTATGCCATCTTCTCCAGGTTTGCTCATTTCTGTTGTaGTTTTGGTACGGTAAATCC +
Preference number: 2 (lower is better)
Translates to: VILLPSQERTQLCHLLQVCSFLL*FWYGKS
Trigger: GGATTTACCGTACCAAAAGCACAACAGAAATGAGCA...AACCTGGAGAAGATGGCATAATTGTGTCCTTTCTTGACTGGGCAGAAGAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR GCA 90 bp CCTTACAGTGATACATTGTCTTCAAGAAGGCGCTCTACAGATGAGCTGGCATTAAGATGGAAGCCCCACTaGAAGATAAAATTATATAAG +
Preference number: 2 (lower is better)
Translates to: PYSDTLSSRRRSTDELALRWKPH*KIKLYK
Trigger: CTTATATAATTTTATCTTGCAGTGGGGCTTCCATCT...TAATGCCAGCTCATCTGTAGAGCGCCTTCTTGAAGACAATGTATCACTGTAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR GCA 90 bp ACTGATGCTCAGGATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTAATAAAAGGCTTTCTTTaGTTAAGTGTGGCTCACATT +
Preference number: 2 (lower is better)
Translates to: TDAQDSITRRNLLSRYRLIKGFL*LSVAHI
Trigger: AATGTGAGCCACACTTAAGCAAAGAAAGCCTTTTAT...TAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATCCTGAGCATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR TCA 72 bp AGGTTGGTGAGCAGGTGTCCAGGGGTGTACCGGCTCTaGGGCACTCCTGTCTCACAGGGCAAGGGGATCTCG +
Preference number: 3 (lower is better)
Translates to: RLVSRCPGVYRL*GTPVSQGKGIS
Trigger: CGAGATCCCCTTGCCCTGTGAGACAGGAGTGCCTCAGAGCCGGTACACCCCTGGACACCTGCTCACCAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CAA 90 bp TGGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGACACCGCTTTGGGAGTTTGCTaGGCATGCAAGCTTGACCGG +
Preference number: 3 (lower is better)
Translates to: WQWAYAHPTYTAETHSDTALGVC*ACKLDR
Trigger: CCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAGC...GGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR GCA 72 bp GTGGCCACGCAAGTGTCCACAAAATCCTCTGCAAGCTaGGGCACACACTCAGGTAAGGTTGGTGAGCAGGTG +
Preference number: 3 (lower is better)
Translates to: VATQVSTKSSAS*GTHSGKVGEQV
Trigger: CACCTGCTCACCAACCTTACCTGAGTGTGTGCCGCAGCTTGCAGAGGATTTTGTGGACACTTGCGTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR GCA 72 bp ACCTTTGGGGTCGAGGATCTCAGGGTAGGAAGGAAATaGTTGCTGCCAGGGAAGTGGTGGGAGTGCAGTGAG +
Preference number: 3 (lower is better)
Translates to: TFGVEDLRVGRK*LLPGKWWECSE
Trigger: CTCACTGCACTCCCACCACTTCCCTGGCAGCAAGCATTTCCTTCCTACCCTGAGATCCTCGACCCCAAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR CCA 72 bp AGCCTGGCTGTGAGGGACAGGCAGCTCGGTAACAAGTaGCCACGCAAGTGTCCACAAAATCCTCTGCAAGCT +
Preference number: 3 (lower is better)
Translates to: SLAVRDRQLGNK*PRKCPQNPLQA
Trigger: AGCTTGCAGAGGATTTTGTGGACACTTGCGTGGCCACTTGTTACCGAGCTGCCTGTCCCTCACAGCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CAA 90 bp GCAGAACACAGAACTGAATGCAGAGGTATCCAAGCCTTGCCTCCTCTTCAGCCCGCTTTGGGAGTTTGCTaGGCATGCAAGCTTGACCGG +
Preference number: 3 (lower is better)
Translates to: AEHRTECRGIQALPPLQPALGVC*ACKLDR
Trigger: CCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAGC...GGGCTGAAGAGGAGGCAAGGCTTGGATACCTCTGCATTCAGTTCTGTGTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR GCA 72 bp CAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATaGAGAGGTATCCAAGCCTTGCCTCCTCTTCAGCCC +
Preference number: 3 (lower is better)
Translates to: QSNHRLAEHRTE*RGIQALPPLQP
Trigger: GGGCTGAAGAGGAGGCAAGGCTTGGATACCTCTGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CAA 90 bp GGGGGACCTGGCATTGTTAGGCTCTGCTCATTTCTGTTGTGCTTTTGGTACGGTGTAGGAAGGAAATGCTaGCTGCCAGGGAAGTGGTGG +
Preference number: 3 (lower is better)
Translates to: GGPGIVRLCSFLLCFWYGVGRKC*LPGKWW
Trigger: CCACCACTTCCCTGGCAGCAAGCATTTCCTTCCTAC...ACCGTACCAAAAGCACAACAGAAATGAGCAGAGCCTAACAATGCCAGGTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR CCA 72 bp TTGGAGGTGGTTTGCTCAATTAGCCTCAATTGGCAGTaGGCTTACGCACACCCCACGTACACAGCAGAGACT +
Preference number: 3 (lower is better)
Translates to: LEVVCSISLNWQ*AYAHPTYTAET
Trigger: AGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCAATTGAGGCTAATTGAGCAAACCACCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR TCA 72 bp GAAATGCTTGCTGCCAGGGAAGTGGTGGGAGTGCAGTaGGCATTAGCATATGGTGGGAATCTGAGCTTAGCA +
Preference number: 3 (lower is better)
Translates to: EMLAAREVVGVQ*ALAYGGNLSLA
Trigger: TGCTAAGCTCAGATTCCCACCATATGCTAATGCTCACTGCACTCCCACCACTTCCCTGGCAGCAAGCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR TCA 72 bp GTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTaGATGCAGAGGTATCCAAGCCTTGCCTCCTCTTCA +
Preference number: 3 (lower is better)
Translates to: VSVQSQAGRTQN*MQRYPSLASSS
Trigger: TGAAGAGGAGGCAAGGCTTGGATACCTCTGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR CCA 72 bp CGTACACAGCAGAGACTCACTCAGACACCGGGTCTTTaGCAAGGGGGCGGTTATAAAAGGCTTTCTTTGCTT +
Preference number: 3 (lower is better)
Translates to: RTQQRLTQTPGL*QGGGYKRLSLL
Trigger: AAGCAAAGAAAGCCTTTTATAACCGCCCCCTTGCCAAAGACCCGGTGTCTGAGTGAGTCTCTGCTGTGTACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CAA 90 bp GTCATTCTTCTGCCCAGTCAAGAAAGGACACAATTATGCCATCTTCTCCAGGTTCACACTCAGGTAAGGTaGGTGAGCAGGTGTCCAGGG +
Preference number: 3 (lower is better)
Translates to: VILLPSQERTQLCHLLQVHTQVR*VSRCPG
Trigger: CCCTGGACACCTGCTCACCAACCTTACCTGAGTGTG...AACCTGGAGAAGATGGCATAATTGTGTCCTTTCTTGACTGGGCAGAAGAATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CAA 90 bp ACCCTGCCAGCTTATTGTGTGATGTTTTCTAGGATACTTGCTCACAACCCTCCTGTAGGAAGGAAATGCTaGCTGCCAGGGAAGTGGTGG +
Preference number: 3 (lower is better)
Translates to: TLPAYCVMFSRILAHNPPVGRKC*LPGKWW
Trigger: CCACCACTTCCCTGGCAGCAAGCATTTCCTTCCTAC...AGGAGGGTTGTGAGCAAGTATCCTAGAAAACATCACACAATAAGCTGGCAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR TCA 72 bp GAGTTTGCTTGGCATGCAAGCTTGACCGGACATCCATaGGTGGAGGTCTTGTCAACACAACGAGCTAGATCT +
Preference number: 3 (lower is better)
Translates to: EFAWHASLTGHP*VEVLSTQRARS
Trigger: AGATCTAGCTCGTTGTGTTGACAAGACCTCCACTCATGGATGTCCGGTCAAGCTTGCATGCCAAGCAAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR GCA 72 bp CTAGGATACTTGCTCACAACCCTCCTCTTCCTGCACTaGACAACACAGGCTTATTTCTGTACCTTTGGGGTC +
Preference number: 3 (lower is better)
Translates to: LGYLLTTLLFLH*TTQAYFCTFGV
Trigger: GACCCCAAAGGTACAGAAATAAGCCTGTGTTGTGCAGTGCAGGAAGAGGAGGGTTGTGAGCAAGTATCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR GCA 72 bp GCTGTGACAAGGGAGGTGAAATTGTTGGAGGTGGTTTaGTCAATTAGCCTCAATTGGCAGTGGGCTTACGCA +
Preference number: 3 (lower is better)
Translates to: AVTREVKLLEVV*SISLNWQWAYA
Trigger: TGCGTAAGCCCACTGCCAATTGAGGCTAATTGAGCAAACCACCTCCAACAATTTCACCTCCCTTGTCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR CCA 72 bp CCTGCACTGCACAACACAGGCTTATTTCTGTACCTTTaGGGTCGAGGATCTCAGGGTAGGAAGGAAATGCTT +
Preference number: 3 (lower is better)
Translates to: PALHNTGLFLYL*GRGSQGRKEML
Trigger: AAGCATTTCCTTCCTACCCTGAGATCCTCGACCCCAAAGGTACAGAAATAAGCCTGTGTTGTGCAGTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR CCA 72 bp GCTCACATTTCTGGCAGTGTCAGTCCAATCACAGGCTaGCAGAACACAGAACTGAATGCAGAGGTATCCAAG +
Preference number: 3 (lower is better)
Translates to: AHISGSVSPITG*QNTELNAEVSK
Trigger: CTTGGATACCTCTGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAATGTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR CCA 72 bp GCCCCAGTAGGTAGCAATTACTTAATCACACTGCTTTaGGAGTTTGCTTGGCATGCAAGCTTGACCGGACAT +
Preference number: 3 (lower is better)
Translates to: APVGSNYLITLL*EFAWHASLTGH
Trigger: ATGTCCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAGCAGTGTGATTAAGTAATTGCTACCTACTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CAA 90 bp ACTGATGCTCAGGATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTACACACTCAGGTAAGGTaGGTGAGCAGGTGTCCAGGG +
Preference number: 3 (lower is better)
Translates to: TDAQDSITRRNLLSRYRLHTQVR*VSRCPG
Trigger: CCCTGGACACCTGCTCACCAACCTTACCTGAGTGTG...TAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATCCTGAGCATCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CAA 90 bp ACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTGCGATCTTAATCACACTGCTTaGGGAGTTTGCTTGGCATGC +
Preference number: 3 (lower is better)
Translates to: TRRNLLSRYRLVWPKQCDLNHTA*GVCLAC
Trigger: GCATGCCAAGCAAACTCCCAAAGCAGTGTGATTAAG...ATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CAA 90 bp CACTGCTGGGGCCAACTGAGAGTTGAGTGTGTGGATACAGAAAGAAAGATCTGTACAAGGGAGGTGAAATaGTTGGAGGTGGTTTGCTCA +
Preference number: 3 (lower is better)
Translates to: HCWGQLRVECVDTERKICTREVK*LEVVCS
Trigger: TGAGCAAACCACCTCCAACAATTTCACCTCCCTTGT...ACAGATCTTTCTTTCTGTATCCACACACTCAACTCTCAGTTGGCCCCAGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CAA 90 bp ACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTGCGATAGGGAGGTGAAATTGTaGGAGGTGGTTTGCTCAATT +
Preference number: 3 (lower is better)
Translates to: TRRNLLSRYRLVWPKQCDREVKL*EVVCSI
Trigger: AATTGAGCAAACCACCTCCAACAATTTCACCTCCCT...ATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR GCA 72 bp TTACTTAATCACACTGCTTTGGGAGTTTGCTTGGCATaGAAGCTTGACCGGACATCCATGAGTGGAGGTCTT +
Preference number: 3 (lower is better)
Translates to: LLNHTALGVCLA*KLDRTSMSGGL
Trigger: AAGACCTCCACTCATGGATGTCCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAGCAGTGTGATTAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR CCA 72 bp AAAAGGCTTTCTTTGCTTAAGTGTGGCTCACATTTCTaGCAGTGTCAGTCCAATCACAGGCTGGCAGAACAC +
Preference number: 3 (lower is better)
Translates to: KRLSLLKCGSHF*QCQSNHRLAEH
Trigger: GTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAATGTGAGCCACACTTAAGCAAAGAAAGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CAA 90 bp CCTTACAGTGATACATTGTCTTCAAGAAGGCGCTCTACAGATGAGCTGGCATTACTTAATCACACTGCTTaGGGAGTTTGCTTGGCATGC +
Preference number: 3 (lower is better)
Translates to: PYSDTLSSRRRSTDELALLNHTA*GVCLAC
Trigger: GCATGCCAAGCAAACTCCCAAAGCAGTGTGATTAAG...TAATGCCAGCTCATCTGTAGAGCGCCTTCTTGAAGACAATGTATCACTGTAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CAA 90 bp GTCATTCTTCTGCCCAGTCAAGAAAGGACACAATTATGCCATCTTCTCCAGGTTCTCTGCTCATTTCTGTaGTGCTTTTGGTACGGTAAA +
Preference number: 3 (lower is better)
Translates to: VILLPSQERTQLCHLLQVLCSFL*CFWYGK
Trigger: TTTACCGTACCAAAAGCACAACAGAAATGAGCAGAG...AACCTGGAGAAGATGGCATAATTGTGTCCTTTCTTGACTGGGCAGAAGAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR TCA 72 bp GTGCGATGTGGTGTTGTGCTTTGGTATAAAATCACGTaGCCTGGGTTGATTTTTCTTTCAGGGAATGGTAAC +
Preference number: 3 (lower is better)
Translates to: VRCGVVLWYKIT*PGLIFLSGNGN
Trigger: GTTACCATTCCCTGAAAGAAAAATCAACCCAGGTCACGTGATTTTATACCAAAGCACAACACCACATCGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CAA 90 bp ACTGATGCTCAGGATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTAAGGGAGGTGAAATTGTaGGAGGTGGTTTGCTCAATT +
Preference number: 3 (lower is better)
Translates to: TDAQDSITRRNLLSRYRLREVKL*EVVCSI
Trigger: AATTGAGCAAACCACCTCCAACAATTTCACCTCCCT...TAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATCCTGAGCATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR GCA 72 bp GTCATTCTTCTGCCCAGTCAAGAAAGGACACAATTATaGCATCTTCTCCAGGTTAGTGAAAAAGGCTATTCT +
Preference number: 3 (lower is better)
Translates to: VILLPSQERTQL*HLLQVSEKGYS
Trigger: AGAATAGCCTTTTTCACTAACCTGGAGAAGATGGCATAATTGTGTCCTTTCTTGACTGGGCAGAAGAATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR-3UTR CAA 90 bp ACTGATGCTCAGGATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTATATAAAAGGCTTTCTTaGCTTAAGTGTGGCTCACAT +
Preference number: 3 (lower is better)
Translates to: TDAQDSITRRNLLSRYRLYKRLS*LKCGSH
Trigger: ATGTGAGCCACACTTAAGCAAAGAAAGCCTTTTATA...TAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATCCTGAGCATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR TCA 72 bp ACGTCACTTGATAAGGTATACCGACATACAAGTTGCTaGGTCTTAAGACCCTTAATGTTACAGGTAAATGAA +
Preference number: 3 (lower is better)
Translates to: TSLDKVYRHTSC*VLRPLMLQVNE
Trigger: TTCATTTACCTGTAACATTAAGGGTCTTAAGACTCAGCAACTTGTATGTCGGTATACCTTATCAAGTGACGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp ACCCCACGTACACAGCAGAGACTCACTCAGACACCGGGTCTTTGGCAAGGGGGCCTGCCTTGTGGGACCTaGGGAAAGACAGCGAGTAGG +
Preference number: 4 (lower is better)
Translates to: TPRTQQRLTQTPGLWQGGLPCGT*GKTASR
Trigger: CCTACTCGCTGTCTTTCCCCAGGTCCCACAAGGCAG...GCCCCCTTGCCAAAGACCCGGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp ACCCCACGTACACAGCAGAGACTCACTCAGACACCGGGTCTTTGGCAAGGGGGCATCTCCCTGCTGCTCTaGGCTCTGTTCTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: TPRTQQRLTQTPGLWQGGISLLL*ALFSCL
Trigger: AAGGCAGGAGAACAGAGCTCAGAGCAGCAGGGAGAT...GCCCCCTTGCCAAAGACCCGGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp TGGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGACACCCAGCGATTCCTCTACTaGTTGCAGCCGGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: WQWAYAHPTYTAETHSDTQRFLY*LQPALE
Trigger: CTCCAAGGCCGGCTGCAATCAGTAGAGGAATCGCTG...GGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp ACCCCACGTACACAGCAGAGACTCACTCAGACACCGGGTCTTTGGCAAGGGGGCAGTTCCGCCCTTCAGTaGGAGCGTGAGCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TPRTQQRLTQTPGLWQGGSSALQ*ERELSP
Trigger: TGGAGAAAGCTCACGCTCTCACTGAAGGGCGGAACT...GCCCCCTTGCCAAAGACCCGGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp ACCCCACGTACACAGCAGAGACTCACTCAGACACCGGGTCTTTGGCAAGGGGGCTTGCTCCTGCGGTGGTaGGGTTGTTTCACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: TPRTQQRLTQTPGLWQGGLLLRW*GCFTSS
Trigger: GGAGCTTGTGAAACAACCGCACCACCGCAGGAGCAA...GCCCCCTTGCCAAAGACCCGGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp ACCCCACGTACACAGCAGAGACTCACTCAGACACCGGGTCTTTGGCAAGGGGGCGCCTCCTCCAGACTCTaGAGAACCTCATGGAACCTG +
Preference number: 4 (lower is better)
Translates to: TPRTQQRLTQTPGLWQGGASSRL*RTSWNL
Trigger: CAGGTTCCATGAGGTTCTCCAGAGTCTGGAGGAGGC...GCCCCCTTGCCAAAGACCCGGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp ACCCCACGTACACAGCAGAGACTCACTCAGACACCGGGTCTTTGGCAAGGGGGCAGCTGTGGCTTTCTCTaGGGACATCCAAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: TPRTQQRLTQTPGLWQGGSCGFL*GHPSPR
Trigger: TCTGGGACTTGGATGTCCTCAGAGAAAGCCACAGCT...GCCCCCTTGCCAAAGACCCGGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp AATTGGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGACGACTCCAGGTCCTGGTaGTTGTCACCTGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: NWQWAYAHPTYTAETHSDDSRSW*LSPEAG
Trigger: CCCAGCCTCAGGTGACAATCACCAGGACCTGGAGTC...GTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp TCTGAGGCACTCCTGTCTCACAGGGCAAGGGGATCTCGGCCTGCGCTTTTGCAGTTGAATCGCACTTGCTaGGATTTGCTCCTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SEALLSHRARGSRPALLQLNRTC*DLLLRW
Trigger: CCACCGCAGGAGCAAATCGCAGCAAGTGCGATTCAA...CTGCAAAAGCGCAGGCCGAGATCCCCTTGCCCTGTGAGACAGGAGTGCCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp ACCCCACGTACACAGCAGAGACTCACTCAGACACCGGGTCTTTGGCAAGGGGGCTCCTTGAATCGCACTTaGTGCGATTTGCTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: TPRTQQRLTQTPGLWQGGSLNRT*CDLLLR
Trigger: CCGCAGGAGCAAATCGCAGCAAGTGCGATTCAAGGA...GCCCCCTTGCCAAAGACCCGGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp ACCCCACGTACACAGCAGAGACTCACTCAGACACCGGGTCTTTGGCAAGGGGGCGATGGCACTTGGGGATaGTGTTGGCATTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: TPRTQQRLTQTPGLWQGGDGTWG*CWHFHQ
Trigger: CTGGTGGAAATGCCAACAGCATCCCCAAGTGCCATC...GCCCCCTTGCCAAAGACCCGGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp TCTGAGGCACTCCTGTCTCACAGGGCAAGGGGATCTCGGCCTGCGCTTTTGCAGTTCCTCAGTTGGTTCTaGCTCCTCCAGACTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SEALLSHRARGSRPALLQFLSWF*LLQTLE
Trigger: CTCCAGAGTCTGGAGGAGGCAGAACCAACTGAGGAA...CTGCAAAAGCGCAGGCCGAGATCCCCTTGCCCTGTGAGACAGGAGTGCCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp TCTGAGGCACTCCTGTCTCACAGGGCAAGGGGATCTCGGCCTGCGCTTTTGCAGTCTGTTCTCCTGCCTTaGAATCGAGGCAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SEALLSHRARGSRPALLQSVLLP*NRGREL
Trigger: CAACTCCCTGCCTCGATTCCAAGGCAGGAGAACAGA...CTGCAAAAGCGCAGGCCGAGATCCCCTTGCCCTGTGAGACAGGAGTGCCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp TCTGAGGCACTCCTGTCTCACAGGGCAAGGGGATCTCGGCCTGCGCTTTTGCAGAGGTGCTTCCTCAGTTaGTTCTGCCTCCTCCAGACT +
Preference number: 4 (lower is better)
Translates to: SEALLSHRARGSRPALLQRCFLS*FCLLQT
Trigger: AGTCTGGAGGAGGCAGAACCAACTGAGGAAGCACCT...CTGCAAAAGCGCAGGCCGAGATCCCCTTGCCCTGTGAGACAGGAGTGCCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp TGGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGACACCGTGAGTCCGTGGTGGTaGGGGAACACACATCTTCTT +
Preference number: 4 (lower is better)
Translates to: WQWAYAHPTYTAETHSDTVSPWW*GNTHLL
Trigger: AAGAAGATGTGTGTTCCCTCACCACCACGGACTCAC...GGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp TCTGAGGCACTCCTGTCTCACAGGGCAAGGGGATCTCGGCCTGCGCTTTTGCAGCACATCTTCTTTGACTaGGATGATGGAAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SEALLSHRARGSRPALLQHIFFD*DDGRPR
Trigger: CCTTGGCCTTCCATCATCTCAGTCAAAGAAGATGTG...CTGCAAAAGCGCAGGCCGAGATCCCCTTGCCCTGTGAGACAGGAGTGCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR CAA 72 bp TTTGGGGTCGAGGATCTCAGGGTAGGAAGGAAATGCTaGCTGCCAGGGAAGTGGTGGGAGTGCAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: FGVEDLRVGRKC*LPGKWWECSEH
Trigger: ATGCTCACTGCACTCCCACCACTTCCCTGGCAGCAAGCATTTCCTTCCTACCCTGAGATCCTCGACCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp AATTGGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGACCTGGTGATTGTCACCTaGGGCTGGGCAATCAGAAGA +
Preference number: 4 (lower is better)
Translates to: NWQWAYAHPTYTAETHSDLVIVT*GWAIRR
Trigger: TCTTCTGATTGCCCAGCCTCAGGTGACAATCACCAG...GTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp GCAGAACACAGAACTGAATGCAGAGGTATCCAAGCCTTGCCTCCTCTTCAGCCCTTGCTCCTGCGGTGGTaGGGTTGTTTCACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: AEHRTECRGIQALPPLQPLLLRW*GCFTSS
Trigger: GGAGCTTGTGAAACAACCGCACCACCGCAGGAGCAA...GGGCTGAAGAGGAGGCAAGGCTTGGATACCTCTGCATTCAGTTCTGTGTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp TGGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGACACCTCTTCTTCACCTTCTTaGTCTTCCGCCGTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: WQWAYAHPTYTAETHSDTSSSPS*SSAVSP
Trigger: AGGACTTACGGCGGAAGAGCAAGAAGGTGAAGAAGA...GGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp GCAGAACACAGAACTGAATGCAGAGGTATCCAAGCCTTGCCTCCTCTTCAGCCCAGACTGGGGGAGGTCTaGATGGAGATGCTGCGGAAT +
Preference number: 4 (lower is better)
Translates to: AEHRTECRGIQALPPLQPRLGEV*MEMLRN
Trigger: ATTCCGCAGCATCTCCATCCAGACCTCCCCCAGTCT...GGGCTGAAGAGGAGGCAAGGCTTGGATACCTCTGCATTCAGTTCTGTGTTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp GCAGAACACAGAACTGAATGCAGAGGTATCCAAGCCTTGCCTCCTCTTCAGCCCTCTGGGGTGTCTGACTaGCTGGGGAGCTTTGTCACA +
Preference number: 4 (lower is better)
Translates to: AEHRTECRGIQALPPLQPSGVSD*LGSFVT
Trigger: TGTGACAAAGCTCCCCAGCCAGTCAGACACCCCAGA...GGGCTGAAGAGGAGGCAAGGCTTGGATACCTCTGCATTCAGTTCTGTGTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp AATTGGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGACTCTGTTCTCCTGCCTTaGAATCGAGGCAGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: NWQWAYAHPTYTAETHSDSVLLP*NRGREL
Trigger: CAACTCCCTGCCTCGATTCCAAGGCAGGAGAACAGA...GTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp GCAGAACACAGAACTGAATGCAGAGGTATCCAAGCCTTGCCTCCTCTTCAGCCCCTCTGGAGAACCTCATaGAACCTGCCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AEHRTECRGIQALPPLQPLWRTS*NLPSCC
Trigger: GCAGCAGGAAGGCAGGTTCCATGAGGTTCTCCAGAG...GGGCTGAAGAGGAGGCAAGGCTTGGATACCTCTGCATTCAGTTCTGTGTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp GCAGAACACAGAACTGAATGCAGAGGTATCCAAGCCTTGCCTCCTCTTCAGCCCGCCTCCTCCAGACTCTaGAGAACCTCATGGAACCTG +
Preference number: 4 (lower is better)
Translates to: AEHRTECRGIQALPPLQPASSRL*RTSWNL
Trigger: CAGGTTCCATGAGGTTCTCCAGAGTCTGGAGGAGGC...GGGCTGAAGAGGAGGCAAGGCTTGGATACCTCTGCATTCAGTTCTGTGTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp GCAGAACACAGAACTGAATGCAGAGGTATCCAAGCCTTGCCTCCTCTTCAGCCCCTGGTGATTGTCACCTaGGGCTGGGCAATCAGAAGA +
Preference number: 4 (lower is better)
Translates to: AEHRTECRGIQALPPLQPLVIVT*GWAIRR
Trigger: TCTTCTGATTGCCCAGCCTCAGGTGACAATCACCAG...GGGCTGAAGAGGAGGCAAGGCTTGGATACCTCTGCATTCAGTTCTGTGTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp GCAGAACACAGAACTGAATGCAGAGGTATCCAAGCCTTGCCTCCTCTTCAGCCCATGCACTGCTACTTCTaGGTGACTCCAGGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: AEHRTECRGIQALPPLQPMHCYF*VTPGPG
Trigger: ACCAGGACCTGGAGTCACTCAGAAGTAGCAGTGCAT...GGGCTGAAGAGGAGGCAAGGCTTGGATACCTCTGCATTCAGTTCTGTGTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp CACACTGCTTTGGGAGTTTGCTTGGCATGCAAGCTTGACCGGACATCCATGAGTAGTTCCGCCCTTCAGTaGGAGCGTGAGCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HTALGVCLACKLDRTSMSSSALQ*ERELSP
Trigger: TGGAGAAAGCTCACGCTCTCACTGAAGGGCGGAACT...ACTCATGGATGTCCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAGCAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCAGTGCCTGGAGGCCTGTaGCTTCCCCATTACACCTGG +
Preference number: 4 (lower is better)
Translates to: ISGSVSPITGWQNTELNAVPGGL*LPHYTW
Trigger: CCAGGTGTAATGGGGAAGGCACAGGCCTCCAGGCAC...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp ACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTGCGATGTGCCTGGAGGCCTGTaGCTTCCCCATTACACCTGG +
Preference number: 4 (lower is better)
Translates to: TRRNLLSRYRLVWPKQCDVPGGL*LPHYTW
Trigger: CCAGGTGTAATGGGGAAGGCACAGGCCTCCAGGCAC...ATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp GGGGGACCTGGCATTGTTAGGCTCTGCTCATTTCTGTTGTGCTTTTGGTACGGTAGGTCTGGATGGAGATaGTGCGGAATCCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GGPGIVRLCSFLLCFWYGRSGWR*CGILLP
Trigger: AGGCAGGAGGATTCCGCAGCATCTCCATCCAGACCT...ACCGTACCAAAAGCACAACAGAAATGAGCAGAGCCTAACAATGCCAGGTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp AATTGGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGACCATCCTAGGGAGAAATaGGTGGGGGATTTTGAGCCT +
Preference number: 4 (lower is better)
Translates to: NWQWAYAHPTYTAETHSDHPREK*VGDFEP
Trigger: AGGCTCAAAATCCCCCACCCATTTCTCCCTAGGATG...GTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp ACCCCACGTACACAGCAGAGACTCACTCAGACACCGGGTCTTTGGCAAGGGGGCTCTAGCTTCCCAGGTTaGACTGTGACAAATATCATC +
Preference number: 4 (lower is better)
Translates to: TPRTQQRLTQTPGLWQGGSSFPG*TVTNII
Trigger: GATGATATTTGTCACAGTCCAACCTGGGAAGCTAGA...GCCCCCTTGCCAAAGACCCGGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp GGGGGACCTGGCATTGTTAGGCTCTGCTCATTTCTGTTGTGCTTTTGGTACGGTGAAGATCTTCCTAGGTaGACTGGCTGGCTACGGGAG +
Preference number: 4 (lower is better)
Translates to: GGPGIVRLCSFLLCFWYGEDLPR*TGWLRE
Trigger: CTCCCGTAGCCAGCCAGTCCACCTAGGAAGATCTTC...ACCGTACCAAAAGCACAACAGAAATGAGCAGAGCCTAACAATGCCAGGTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp CACACTGCTTTGGGAGTTTGCTTGGCATGCAAGCTTGACCGGACATCCATGAGTCTCTGGAGAACCTCATaGAACCTGCCTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HTALGVCLACKLDRTSMSLWRTS*NLPSCC
Trigger: GCAGCAGGAAGGCAGGTTCCATGAGGTTCTCCAGAG...ACTCATGGATGTCCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAGCAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp GCAGAACACAGAACTGAATGCAGAGGTATCCAAGCCTTGCCTCCTCTTCAGCCCAGGTGCTTCCTCAGTTaGTTCTGCCTCCTCCAGACT +
Preference number: 4 (lower is better)
Translates to: AEHRTECRGIQALPPLQPRCFLS*FCLLQT
Trigger: AGTCTGGAGGAGGCAGAACCAACTGAGGAAGCACCT...GGGCTGAAGAGGAGGCAAGGCTTGGATACCTCTGCATTCAGTTCTGTGTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCACAGATAGGTTGCCGTTaGCCTGGATGGCACTTGGGG +
Preference number: 4 (lower is better)
Translates to: ISGSVSPITGWQNTELNAQIGCR*PGWHLG
Trigger: CCCCAAGTGCCATCCAGGTCAACGGCAACCTATCTG...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCACCATCCTCAAGATGCTaGGCCAGCCTCAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ISGSVSPITGWQNTELNAPSSRC*ASLRKA
Trigger: TGCCTTCCTGAGGCTGGCTCAGCATCTTGAGGATGG...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp AGGTATCCAAGCCTTGCCTCCTCTTCAGCCCCAGTAGGTAGCAATTACTTAATCCCATCCTCAAGATGCTaGGCCAGCCTCAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RYPSLASSSAPVGSNYLIPSSRC*ASLRKA
Trigger: TGCCTTCCTGAGGCTGGCTCAGCATCTTGAGGATGG...GATTAAGTAATTGCTACCTACTGGGGCTGAAGAGGAGGCAAGGCTTGGATACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp GCAGAACACAGAACTGAATGCAGAGGTATCCAAGCCTTGCCTCCTCTTCAGCCCACTGCTACTTCTGAGTaGCTCCAGGTCCTGGTGATT +
Preference number: 4 (lower is better)
Translates to: AEHRTECRGIQALPPLQPTATSE*LQVLVI
Trigger: AATCACCAGGACCTGGAGTCACTCAGAAGTAGCAGT...GGGCTGAAGAGGAGGCAAGGCTTGGATACCTCTGCATTCAGTTCTGTGTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp ACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTGCGATCAGCGATTCCTCTACTaGTTGCAGCCGGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: TRRNLLSRYRLVWPKQCDQRFLY*LQPALE
Trigger: CTCCAAGGCCGGCTGCAATCAGTAGAGGAATCGCTG...ATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp CACACTGCTTTGGGAGTTTGCTTGGCATGCAAGCTTGACCGGACATCCATGAGTAGGTGCTGCAGTTGTTaGGATCTTGGCCAGTCCGAT +
Preference number: 4 (lower is better)
Translates to: HTALGVCLACKLDRTSMSRCCSC*DLGQSD
Trigger: ATCGGACTGGCCAAGATCTCAACAACTGCAGCACCT...ACTCATGGATGTCCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAGCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp CACACTGCTTTGGGAGTTTGCTTGGCATGCAAGCTTGACCGGACATCCATGAGTGATGGCACTTGGGGATaGTGTTGGCATTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: HTALGVCLACKLDRTSMSDGTWG*CWHFHQ
Trigger: CTGGTGGAAATGCCAACAGCATCCCCAAGTGCCATC...ACTCATGGATGTCCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAGCAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp GGCAACCTTACTCTGCCACACCCCATACTTTACAAGAAGACAGCTGCACAGCTGTCCCACCTATCTCCCTaGTGCTCTGAGCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GNLTLPHPILYKKTAAQLSHLSP*CSELCS
Trigger: AGAACAGAGCTCAGAGCAGCAGGGAGATAGGTGGGA...CAGCTGTGCAGCTGTCTTCTTGTAAAGTATGGGGTGTGGCAGAGTAAGGTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp GGGGGACCTGGCATTGTTAGGCTCTGCTCATTTCTGTTGTGCTTTTGGTACGGTGATTCCTCTACTGATTaGAGCCGGCCTTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GGPGIVRLCSFLLCFWYGDSSTD*SRPWRS
Trigger: TGACCTCCAAGGCCGGCTGCAATCAGTAGAGGAATC...ACCGTACCAAAAGCACAACAGAAATGAGCAGAGCCTAACAATGCCAGGTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp CACACTGCTTTGGGAGTTTGCTTGGCATGCAAGCTTGACCGGACATCCATGAGTGATTCCTCTACTGATTaGAGCCGGCCTTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: HTALGVCLACKLDRTSMSDSSTD*SRPWRS
Trigger: TGACCTCCAAGGCCGGCTGCAATCAGTAGAGGAATC...ACTCATGGATGTCCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAGCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp GGCAACCTTACTCTGCCACACCCCATACTTTACAAGAAGACAGCTGCACAGCTGGAACCTCATGGAACCTaGCTTCCTGCTGCCGGAAAT +
Preference number: 4 (lower is better)
Translates to: GNLTLPHPILYKKTAAQLEPHGT*LPAAGN
Trigger: ATTTCCGGCAGCAGGAAGGCAGGTTCCATGAGGTTC...CAGCTGTGCAGCTGTCTTCTTGTAAAGTATGGGGTGTGGCAGAGTAAGGTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp GGCAACCTTACTCTGCCACACCCCATACTTTACAAGAAGACAGCTGCACAGCTGGACCTGGATGGCACTTaGGGATGCTGTTGGCATTTC +
Preference number: 4 (lower is better)
Translates to: GNLTLPHPILYKKTAAQLDLDGT*GCCWHF
Trigger: GAAATGCCAACAGCATCCCCAAGTGCCATCCAGGTC...CAGCTGTGCAGCTGTCTTCTTGTAAAGTATGGGGTGTGGCAGAGTAAGGTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp AATTGGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGACCATCAGGGTTGTCTTTaGGCAAAAGCAATTCGGGTG +
Preference number: 4 (lower is better)
Translates to: NWQWAYAHPTYTAETHSDHQGCL*AKAIRV
Trigger: CACCCGAATTGCTTTTGCCCAAAGACAACCCTGATG...GTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp ATCTTAAGAAGCTCAAACTTTGTGGAAGAAGGCGCTTCCATCCTCATTCTCGGTCCTAGGTGGACTGGCTaGCTACGGGAGCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: ILRSSNFVEEGASILILGPRWTG*LREPGS
Trigger: TGAGCCAGGCTCCCGTAGCCAGCCAGTCCACCTAGG...ACCGAGAATGAGGATGGAAGCGCCTTCTTCCACAAAGTTTGAGCTTCTTAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp GTCATTCTTCTGCCCAGTCAAGAAAGGACACAATTATGCCATCTTCTCCAGGTTCCTAGGTGGACTGGCTaGCTACGGGAGCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: VILLPSQERTQLCHLLQVPRWTG*LREPGS
Trigger: TGAGCCAGGCTCCCGTAGCCAGCCAGTCCACCTAGG...AACCTGGAGAAGATGGCATAATTGTGTCCTTTCTTGACTGGGCAGAAGAATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp GCAGAACACAGAACTGAATGCAGAGGTATCCAAGCCTTGCCTCCTCTTCAGCCCTCCCAGGTTGGACTGTaGCAAATATCATCTGGAACC +
Preference number: 4 (lower is better)
Translates to: AEHRTECRGIQALPPLQPSQVGL*QISSGT
Trigger: GGTTCCAGATGATATTTGTCACAGTCCAACCTGGGA...GGGCTGAAGAGGAGGCAAGGCTTGGATACCTCTGCATTCAGTTCTGTGTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp CACTGCTGGGGCCAACTGAGAGTTGAGTGTGTGGATACAGAAAGAAAGATCTGTGTTGCTCTCTTCAGCTaGGCTTTCTGGGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: HCWGQLRVECVDTERKICVALFS*AFWAES
Trigger: GCTCTCAGCCCAGAAAGCTCAGCTGAAGAGAGCAAC...ACAGATCTTTCTTTCTGTATCCACACACTCAACTCTCAGTTGGCCCCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp ATCTTAAGAAGCTCAAACTTTGTGGAAGAAGGCGCTTCCATCCTCATTCTCGGTGACTCCAGGTCCTGGTaGTTGTCACCTGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ILRSSNFVEEGASILILGDSRSW*LSPEAG
Trigger: CCCAGCCTCAGGTGACAATCACCAGGACCTGGAGTC...ACCGAGAATGAGGATGGAAGCGCCTTCTTCCACAAAGTTTGAGCTTCTTAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp ACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTGCGATCTTCCAACACCAGTCTaGAGCTCTGGGGTGTCTGAC +
Preference number: 4 (lower is better)
Translates to: TRRNLLSRYRLVWPKQCDLPTPV*SSGVSD
Trigger: GTCAGACACCCCAGAGCTTCAGACTGGTGTTGGAAG...ATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp CACTGCTGGGGCCAACTGAGAGTTGAGTGTGTGGATACAGAAAGAAAGATCTGTCTTCCAACACCAGTCTaGAGCTCTGGGGTGTCTGAC +
Preference number: 4 (lower is better)
Translates to: HCWGQLRVECVDTERKICLPTPV*SSGVSD
Trigger: GTCAGACACCCCAGAGCTTCAGACTGGTGTTGGAAG...ACAGATCTTTCTTTCTGTATCCACACACTCAACTCTCAGTTGGCCCCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp AGGTATCCAAGCCTTGCCTCCTCTTCAGCCCCAGTAGGTAGCAATTACTTAATCGCTGCGATTTGCTCCTaGGGTGGTGCGGTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: RYPSLASSSAPVGSNYLIAAICS*GGAVVS
Trigger: TGAAACAACCGCACCACCGCAGGAGCAAATCGCAGC...GATTAAGTAATTGCTACCTACTGGGGCTGAAGAGGAGGCAAGGCTTGGATACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp CACTGCTGGGGCCAACTGAGAGTTGAGTGTGTGGATACAGAAAGAAAGATCTGTGCTGCGATTTGCTCCTaGGGTGGTGCGGTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: HCWGQLRVECVDTERKICAAICS*GGAVVS
Trigger: TGAAACAACCGCACCACCGCAGGAGCAAATCGCAGC...ACAGATCTTTCTTTCTGTATCCACACACTCAACTCTCAGTTGGCCCCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp GGCAACCTTACTCTGCCACACCCCATACTTTACAAGAAGACAGCTGCACAGCTGTGGAACCTGCCTTCCTaGTGCCGGAAATCATACTCT +
Preference number: 4 (lower is better)
Translates to: GNLTLPHPILYKKTAAQLWNLPS*CRKSYS
Trigger: AGAGTATGATTTCCGGCAGCAGGAAGGCAGGTTCCA...CAGCTGTGCAGCTGTCTTCTTGTAAAGTATGGGGTGTGGCAGAGTAAGGTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp ACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTGCGATAGACTGGGGGAGGTCTaGATGGAGATGCTGCGGAAT +
Preference number: 4 (lower is better)
Translates to: TRRNLLSRYRLVWPKQCDRLGEV*MEMLRN
Trigger: ATTCCGCAGCATCTCCATCCAGACCTCCCCCAGTCT...ATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp GGGGGACCTGGCATTGTTAGGCTCTGCTCATTTCTGTTGTGCTTTTGGTACGGTTCTTTGCCCATCCCCTaGACACATGGAGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: GGPGIVRLCSFLLCFWYGSLPIP*THGDQS
Trigger: GCTTTGATCTCCATGTGTCCAGGGGATGGGCAAAGA...ACCGTACCAAAAGCACAACAGAAATGAGCAGAGCCTAACAATGCCAGGTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp TCTGAGGCACTCCTGTCTCACAGGGCAAGGGGATCTCGGCCTGCGCTTTTGCAGACTTTAATTTTCTCTTaGTTTGAGTGCAGCGATTCC +
Preference number: 4 (lower is better)
Translates to: SEALLSHRARGSRPALLQTLIFS*FECSDS
Trigger: GGAATCGCTGCACTCAAACCAAGAGAAAATTAAAGT...CTGCAAAAGCGCAGGCCGAGATCCCCTTGCCCTGTGAGACAGGAGTGCCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp ACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTGCGATTGCTGGGGATTTGGGTaGCGAAGGTGCTTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: TRRNLLSRYRLVWPKQCDCWGFG*RRCFLS
Trigger: ACTGAGGAAGCACCTTCGCCACCCAAATCCCCAGCA...ATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR CAA 72 bp TTGCACCGCAGCGCTGTGACAAGGGAGGTGAAATTGTaGGAGGTGGTTTGCTCAATTAGCCTCAATTGGCAG +
Preference number: 4 (lower is better)
Translates to: LHRSAVTREVKL*EVVCSISLNWQ
Trigger: CTGCCAATTGAGGCTAATTGAGCAAACCACCTCCAACAATTTCACCTCCCTTGTCACAGCGCTGCGGTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCAAGCTGTGGCTTTCTCTaGGGACATCCAAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: ISGSVSPITGWQNTELNASCGFL*GHPSPR
Trigger: TCTGGGACTTGGATGTCCTCAGAGAAAGCCACAGCT...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp CACACTGCTTTGGGAGTTTGCTTGGCATGCAAGCTTGACCGGACATCCATGAGTTCCCAGGTTGGACTGTaGCAAATATCATCTGGAACC +
Preference number: 4 (lower is better)
Translates to: HTALGVCLACKLDRTSMSSQVGL*QISSGT
Trigger: GGTTCCAGATGATATTTGTCACAGTCCAACCTGGGA...ACTCATGGATGTCCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAGCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp ATCTTAAGAAGCTCAAACTTTGTGGAAGAAGGCGCTTCCATCCTCATTCTCGGTGCACTTGCTGCGATTTaGTCCTGCGGTGGTGCGGTT +
Preference number: 4 (lower is better)
Translates to: ILRSSNFVEEGASILILGALAAI*SCGGAV
Trigger: AACCGCACCACCGCAGGAGCAAATCGCAGCAAGTGC...ACCGAGAATGAGGATGGAAGCGCCTTCTTCCACAAAGTTTGAGCTTCTTAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp CACTGCTGGGGCCAACTGAGAGTTGAGTGTGTGGATACAGAAAGAAAGATCTGTTTGAATCGCACTTGCTaGGATTTGCTCCTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: HCWGQLRVECVDTERKICLNRTC*DLLLRW
Trigger: CCACCGCAGGAGCAAATCGCAGCAAGTGCGATTCAA...ACAGATCTTTCTTTCTGTATCCACACACTCAACTCTCAGTTGGCCCCAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp GGGGGACCTGGCATTGTTAGGCTCTGCTCATTTCTGTTGTGCTTTTGGTACGGTAACCTGCCTTCCTGCTaGCGGAAATCATACTCTACA +
Preference number: 4 (lower is better)
Translates to: GGPGIVRLCSFLLCFWYGNLPSC*RKSYST
Trigger: TGTAGAGTATGATTTCCGGCAGCAGGAAGGCAGGTT...ACCGTACCAAAAGCACAACAGAAATGAGCAGAGCCTAACAATGCCAGGTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp CACTGCTGGGGCCAACTGAGAGTTGAGTGTGTGGATACAGAAAGAAAGATCTGTTTCCTCAGTTGGTTCTaGCTCCTCCAGACTCTGGAG +
Preference number: 4 (lower is better)
Translates to: HCWGQLRVECVDTERKICFLSWF*LLQTLE
Trigger: CTCCAGAGTCTGGAGGAGGCAGAACCAACTGAGGAA...ACAGATCTTTCTTTCTGTATCCACACACTCAACTCTCAGTTGGCCCCAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp GGCAACCTTACTCTGCCACACCCCATACTTTACAAGAAGACAGCTGCACAGCTGTCTTCTTCACCTTCTTaGTCTTCCGCCGTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GNLTLPHPILYKKTAAQLSSSPS*SSAVSP
Trigger: AGGACTTACGGCGGAAGAGCAAGAAGGTGAAGAAGA...CAGCTGTGCAGCTGTCTTCTTGTAAAGTATGGGGTGTGGCAGAGTAAGGTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp CACTGCTGGGGCCAACTGAGAGTTGAGTGTGTGGATACAGAAAGAAAGATCTGTGGGTGTCTGACTGGCTaGGGAGCTTTGTCACATGTT +
Preference number: 4 (lower is better)
Translates to: HCWGQLRVECVDTERKICGCLTG*GALSHV
Trigger: AACATGTGACAAAGCTCCCCAGCCAGTCAGACACCC...ACAGATCTTTCTTTCTGTATCCACACACTCAACTCTCAGTTGGCCCCAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp AGGTATCCAAGCCTTGCCTCCTCTTCAGCCCCAGTAGGTAGCAATTACTTAATCGGGTGTCTGACTGGCTaGGGAGCTTTGTCACATGTT +
Preference number: 4 (lower is better)
Translates to: RYPSLASSSAPVGSNYLIGCLTG*GALSHV
Trigger: AACATGTGACAAAGCTCCCCAGCCAGTCAGACACCC...GATTAAGTAATTGCTACCTACTGGGGCTGAAGAGGAGGCAAGGCTTGGATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp CACACTGCTTTGGGAGTTTGCTTGGCATGCAAGCTTGACCGGACATCCATGAGTATATCATCTGGAACCTaGATAGCAGCTGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: HTALGVCLACKLDRTSMSISSGT*IAAVAF
Trigger: GAAAGCCACAGCTGCTATTCAGGTTCCAGATGATAT...ACTCATGGATGTCCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAGCAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp ATCTTAAGAAGCTCAAACTTTGTGGAAGAAGGCGCTTCCATCCTCATTCTCGGTGTTGCTCTCTTCAGCTaGGCTTTCTGGGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: ILRSSNFVEEGASILILGVALFS*AFWAES
Trigger: GCTCTCAGCCCAGAAAGCTCAGCTGAAGAGAGCAAC...ACCGAGAATGAGGATGGAAGCGCCTTCTTCCACAAAGTTTGAGCTTCTTAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp CACTGCTGGGGCCAACTGAGAGTTGAGTGTGTGGATACAGAAAGAAAGATCTGTACTGCTACTTCTGAGTaGCTCCAGGTCCTGGTGATT +
Preference number: 4 (lower is better)
Translates to: HCWGQLRVECVDTERKICTATSE*LQVLVI
Trigger: AATCACCAGGACCTGGAGTCACTCAGAAGTAGCAGT...ACAGATCTTTCTTTCTGTATCCACACACTCAACTCTCAGTTGGCCCCAGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp CCTTACAGTGATACATTGTCTTCAAGAAGGCGCTCTACAGATGAGCTGGCATTAATCTCCCTGCTGCTCTaGGCTCTGTTCTCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PYSDTLSSRRRSTDELALISLLL*ALFSCL
Trigger: AAGGCAGGAGAACAGAGCTCAGAGCAGCAGGGAGAT...TAATGCCAGCTCATCTGTAGAGCGCCTTCTTGAAGACAATGTATCACTGTAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp GGCAACCTTACTCTGCCACACCCCATACTTTACAAGAAGACAGCTGCACAGCTGACTGTATATGATGCATaGTGTGTTCTGGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: GNLTLPHPILYKKTAAQLTVYDA*CVLAGA
Trigger: AGCACCTGCCAGAACACAGCATGCATCATATACAGT...CAGCTGTGCAGCTGTCTTCTTGTAAAGTATGGGGTGTGGCAGAGTAAGGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCATGGAACCTGCCTTCCTaGTGCCGGAAATCATACTCT +
Preference number: 4 (lower is better)
Translates to: ISGSVSPITGWQNTELNAWNLPS*CRKSYS
Trigger: AGAGTATGATTTCCGGCAGCAGGAAGGCAGGTTCCA...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCAACTTGGGGATGCTGTTaGCATTTCCACCAGGGACTT +
Preference number: 4 (lower is better)
Translates to: ISGSVSPITGWQNTELNATWGCC*HFHQGL
Trigger: AAGTCCCTGGTGGAAATGCCAACAGCATCCCCAAGT...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp AATTGGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGACGTGACAAATATCATCTaGAACCTGAATAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: NWQWAYAHPTYTAETHSDVTNII*NLNSSC
Trigger: ACAGCTGCTATTCAGGTTCCAGATGATATTTGTCAC...GTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp CCTTACAGTGATACATTGTCTTCAAGAAGGCGCTCTACAGATGAGCTGGCATTAGAAGATCTTCCTAGGTaGACTGGCTGGCTACGGGAG +
Preference number: 4 (lower is better)
Translates to: PYSDTLSSRRRSTDELALEDLPR*TGWLRE
Trigger: CTCCCGTAGCCAGCCAGTCCACCTAGGAAGATCTTC...TAATGCCAGCTCATCTGTAGAGCGCCTTCTTGAAGACAATGTATCACTGTAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp GTCATTCTTCTGCCCAGTCAAGAAAGGACACAATTATGCCATCTTCTCCAGGTTTCTGGGGTGTCTGACTaGCTGGGGAGCTTTGTCACA +
Preference number: 4 (lower is better)
Translates to: VILLPSQERTQLCHLLQVSGVSD*LGSFVT
Trigger: TGTGACAAAGCTCCCCAGCCAGTCAGACACCCCAGA...AACCTGGAGAAGATGGCATAATTGTGTCCTTTCTTGACTGGGCAGAAGAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCAATGCATGCTGTGTTCTaGCAGGTGCTGCAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: ISGSVSPITGWQNTELNAMHAVF*QVLQLL
Trigger: CAACAACTGCAGCACCTGCCAGAACACAGCATGCAT...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp ACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTGCGATATGCATGCTGTGTTCTaGCAGGTGCTGCAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: TRRNLLSRYRLVWPKQCDMHAVF*QVLQLL
Trigger: CAACAACTGCAGCACCTGCCAGAACACAGCATGCAT...ATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp TATTGTGTGATGTTTTCTAGGATACTTGCTCACAACCCTCCTCTTCCTGCACTGTGCTGGGGATTTGGGTaGCGAAGGTGCTTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: YCVMFSRILAHNPPLPALCWGFG*RRCFLS
Trigger: ACTGAGGAAGCACCTTCGCCACCCAAATCCCCAGCA...CAGTGCAGGAAGAGGAGGGTTGTGAGCAAGTATCCTAGAAAACATCACACAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
3UTR CAA 72 bp CTGGTCACCAGGAAGGGTAACTGTAGAGTAGCATGTTaGGGCCTATCTACATGGTTGTCACAAGATGCATGG +
Preference number: 4 (lower is better)
Translates to: LVTRKGNCRVAC*GLSTWLSQDAW
Trigger: CCATGCATCTTGTGACAACCATGTAGATAGGCCCAAACATGCTACTCTACAGTTACCCTTCCTGGTGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp ACTGATGCTCAGGATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTACAGATAGGTTGCCGTTaGCCTGGATGGCACTTGGGG +
Preference number: 4 (lower is better)
Translates to: TDAQDSITRRNLLSRYRLQIGCR*PGWHLG
Trigger: CCCCAAGTGCCATCCAGGTCAACGGCAACCTATCTG...TAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATCCTGAGCATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp ACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTGCGATCACATCTTCTTTGACTaGGATGATGGAAGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: TRRNLLSRYRLVWPKQCDHIFFD*DDGRPR
Trigger: CCTTGGCCTTCCATCATCTCAGTCAAAGAAGATGTG...ATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp TATTGTGTGATGTTTTCTAGGATACTTGCTCACAACCCTCCTCTTCCTGCACTGGTGAGTCCGTGGTGGTaGGGGAACACACATCTTCTT +
Preference number: 4 (lower is better)
Translates to: YCVMFSRILAHNPPLPALVSPWW*GNTHLL
Trigger: AAGAAGATGTGTGTTCCCTCACCACCACGGACTCAC...CAGTGCAGGAAGAGGAGGGTTGTGAGCAAGTATCCTAGAAAACATCACACAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp CCTTACAGTGATACATTGTCTTCAAGAAGGCGCTCTACAGATGAGCTGGCATTAATGCACTGCTACTTCTaGGTGACTCCAGGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PYSDTLSSRRRSTDELALMHCYF*VTPGPG
Trigger: ACCAGGACCTGGAGTCACTCAGAAGTAGCAGTGCAT...TAATGCCAGCTCATCTGTAGAGCGCCTTCTTGAAGACAATGTATCACTGTAAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp TATTGTGTGATGTTTTCTAGGATACTTGCTCACAACCCTCCTCTTCCTGCACTGTCCTTGAATCGCACTTaGTGCGATTTGCTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: YCVMFSRILAHNPPLPALSLNRT*CDLLLR
Trigger: CCGCAGGAGCAAATCGCAGCAAGTGCGATTCAAGGA...CAGTGCAGGAAGAGGAGGGTTGTGAGCAAGTATCCTAGAAAACATCACACAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp CACACTGCTTTGGGAGTTTGCTTGGCATGCAAGCTTGACCGGACATCCATGAGTGCATATTACTGGCACTaGTATTGGTATTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HTALGVCLACKLDRTSMSAYYWH*YWYLSR
Trigger: CCTGCTCAAATACCAATAGCAGTGCCAGTAATATGC...ACTCATGGATGTCCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAGCAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp CACACTGCTTTGGGAGTTTGCTTGGCATGCAAGCTTGACCGGACATCCATGAGTTTCTCTTGGTTTGAGTaGAGCGATTCCTCTACTGAT +
Preference number: 4 (lower is better)
Translates to: HTALGVCLACKLDRTSMSFSWFE*SDSSTD
Trigger: ATCAGTAGAGGAATCGCTGCACTCAAACCAAGAGAA...ACTCATGGATGTCCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAGCAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp GTCATTCTTCTGCCCAGTCAAGAAAGGACACAATTATGCCATCTTCTCCAGGTTGAACCTCATGGAACCTaGCTTCCTGCTGCCGGAAAT +
Preference number: 4 (lower is better)
Translates to: VILLPSQERTQLCHLLQVEPHGT*LPAAGN
Trigger: ATTTCCGGCAGCAGGAAGGCAGGTTCCATGAGGTTC...AACCTGGAGAAGATGGCATAATTGTGTCCTTTCTTGACTGGGCAGAAGAATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp TATTGTGTGATGTTTTCTAGGATACTTGCTCACAACCCTCCTCTTCCTGCACTGGATTTGCTCCTGCGGTaGTGCGGTTGTTTCACAAGC +
Preference number: 4 (lower is better)
Translates to: YCVMFSRILAHNPPLPALDLLLR*CGCFTS
Trigger: GCTTGTGAAACAACCGCACCACCGCAGGAGCAAATC...CAGTGCAGGAAGAGGAGGGTTGTGAGCAAGTATCCTAGAAAACATCACACAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp CCTTACAGTGATACATTGTCTTCAAGAAGGCGCTCTACAGATGAGCTGGCATTAGATTTGCTCCTGCGGTaGTGCGGTTGTTTCACAAGC +
Preference number: 4 (lower is better)
Translates to: PYSDTLSSRRRSTDELALDLLLR*CGCFTS
Trigger: GCTTGTGAAACAACCGCACCACCGCAGGAGCAAATC...TAATGCCAGCTCATCTGTAGAGCGCCTTCTTGAAGACAATGTATCACTGTAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp GTCATTCTTCTGCCCAGTCAAGAAAGGACACAATTATGCCATCTTCTCCAGGTTGACCTGGATGGCACTTaGGGATGCTGTTGGCATTTC +
Preference number: 4 (lower is better)
Translates to: VILLPSQERTQLCHLLQVDLDGT*GCCWHF
Trigger: GAAATGCCAACAGCATCCCCAAGTGCCATCCAGGTC...AACCTGGAGAAGATGGCATAATTGTGTCCTTTCTTGACTGGGCAGAAGAATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp CACACTGCTTTGGGAGTTTGCTTGGCATGCAAGCTTGACCGGACATCCATGAGTTCTAGCTTCCCAGGTTaGACTGTGACAAATATCATC +
Preference number: 4 (lower is better)
Translates to: HTALGVCLACKLDRTSMSSSFPG*TVTNII
Trigger: GATGATATTTGTCACAGTCCAACCTGGGAAGCTAGA...ACTCATGGATGTCCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAGCAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp CACTGCTGGGGCCAACTGAGAGTTGAGTGTGTGGATACAGAAAGAAAGATCTGTATATCATCTGGAACCTaGATAGCAGCTGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: HCWGQLRVECVDTERKICISSGT*IAAVAF
Trigger: GAAAGCCACAGCTGCTATTCAGGTTCCAGATGATAT...ACAGATCTTTCTTTCTGTATCCACACACTCAACTCTCAGTTGGCCCCAGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp ACTGATGCTCAGGATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTAAGGTCTGGATGGAGATaGTGCGGAATCCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: TDAQDSITRRNLLSRYRLRSGWR*CGILLP
Trigger: AGGCAGGAGGATTCCGCAGCATCTCCATCCAGACCT...TAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATCCTGAGCATCAGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp GTCATTCTTCTGCCCAGTCAAGAAAGGACACAATTATGCCATCTTCTCCAGGTTCATCCTAGGGAGAAATaGGTGGGGGATTTTGAGCCT +
Preference number: 4 (lower is better)
Translates to: VILLPSQERTQLCHLLQVHPREK*VGDFEP
Trigger: AGGCTCAAAATCCCCCACCCATTTCTCCCTAGGATG...AACCTGGAGAAGATGGCATAATTGTGTCCTTTCTTGACTGGGCAGAAGAATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp CACTGCTGGGGCCAACTGAGAGTTGAGTGTGTGGATACAGAAAGAAAGATCTGTTGCCCGGCATATTACTaGCACTGCTATTGGTATTTG +
Preference number: 4 (lower is better)
Translates to: HCWGQLRVECVDTERKICCPAYY*HCYWYL
Trigger: CAAATACCAATAGCAGTGCCAGTAATATGCCGGGCA...ACAGATCTTTCTTTCTGTATCCACACACTCAACTCTCAGTTGGCCCCAGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp ACCCTGCCAGCTTATTGTGTGATGTTTTCTAGGATACTTGCTCACAACCCTCCTCATCAGGGTTGTCTTTaGGCAAAAGCAATTCGGGTG +
Preference number: 4 (lower is better)
Translates to: TLPAYCVMFSRILAHNPPHQGCL*AKAIRV
Trigger: CACCCGAATTGCTTTTGCCCAAAGACAACCCTGATG...AGGAGGGTTGTGAGCAAGTATCCTAGAAAACATCACACAATAAGCTGGCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp CCTTACAGTGATACATTGTCTTCAAGAAGGCGCTCTACAGATGAGCTGGCATTAATTCTAAGCAGAAGCTaGCAGGCCCATTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: PYSDTLSSRRRSTDELALILSRS*QAHCFA
Trigger: TGCAAAGCAATGGGCCTGTCAGCTTCTGCTTAGAAT...TAATGCCAGCTCATCTGTAGAGCGCCTTCTTGAAGACAATGTATCACTGTAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCAGCTTTCTCCAGATCCTaGATCACATTCAATAGGACT +
Preference number: 4 (lower is better)
Translates to: ISGSVSPITGWQNTELNAAFSRS*ITFNRT
Trigger: AGTCCTATTGAATGTGATTCAGGATCTGGAGAAAGC...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR TCA 90 bp AGGTATCCAAGCCTTGCCTCCTCTTCAGCCCCAGTAGGTAGCAATTACTTAATCGCTTTCTCCAGATCCTaGATCACATTCAATAGGACT +
Preference number: 4 (lower is better)
Translates to: RYPSLASSSAPVGSNYLIAFSRS*ITFNRT
Trigger: AGTCCTATTGAATGTGATTCAGGATCTGGAGAAAGC...GATTAAGTAATTGCTACCTACTGGGGCTGAAGAGGAGGCAAGGCTTGGATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp AGGTATCCAAGCCTTGCCTCCTCTTCAGCCCCAGTAGGTAGCAATTACTTAATCGCATATTACTGGCACTaGTATTGGTATTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RYPSLASSSAPVGSNYLIAYYWH*YWYLSR
Trigger: CCTGCTCAAATACCAATAGCAGTGCCAGTAATATGC...GATTAAGTAATTGCTACCTACTGGGGCTGAAGAGGAGGCAAGGCTTGGATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp ACTGATGCTCAGGATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTATCCCACCTATCTCCCTaGTGCTCTGAGCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: TDAQDSITRRNLLSRYRLSHLSP*CSELCS
Trigger: AGAACAGAGCTCAGAGCAGCAGGGAGATAGGTGGGA...TAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATCCTGAGCATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp TATTGTGTGATGTTTTCTAGGATACTTGCTCACAACCCTCCTCTTCCTGCACTGAACCTGCCTTCCTGCTaGCGGAAATCATACTCTACA +
Preference number: 4 (lower is better)
Translates to: YCVMFSRILAHNPPLPALNLPSC*RKSYST
Trigger: TGTAGAGTATGATTTCCGGCAGCAGGAAGGCAGGTT...CAGTGCAGGAAGAGGAGGGTTGTGAGCAAGTATCCTAGAAAACATCACACAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp TATTGTGTGATGTTTTCTAGGATACTTGCTCACAACCCTCCTCTTCCTGCACTGACTGTATATGATGCATaGTGTGTTCTGGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: YCVMFSRILAHNPPLPALTVYDA*CVLAGA
Trigger: AGCACCTGCCAGAACACAGCATGCATCATATACAGT...CAGTGCAGGAAGAGGAGGGTTGTGAGCAAGTATCCTAGAAAACATCACACAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp ACTGATGCTCAGGATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTAACTTGGGGATGCTGTTaGCATTTCCACCAGGGACTT +
Preference number: 4 (lower is better)
Translates to: TDAQDSITRRNLLSRYRLTWGCC*HFHQGL
Trigger: AAGTCCCTGGTGGAAATGCCAACAGCATCCCCAAGT...TAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATCCTGAGCATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp ACTGATGCTCAGGATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTATCTTTGCCCATCCCCTaGACACATGGAGATCAAAGC +
Preference number: 4 (lower is better)
Translates to: TDAQDSITRRNLLSRYRLSLPIP*THGDQS
Trigger: GCTTTGATCTCCATGTGTCCAGGGGATGGGCAAAGA...TAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATCCTGAGCATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp CCTTACAGTGATACATTGTCTTCAAGAAGGCGCTCTACAGATGAGCTGGCATTATGCCCGGCATATTACTaGCACTGCTATTGGTATTTG +
Preference number: 4 (lower is better)
Translates to: PYSDTLSSRRRSTDELALCPAYY*HCYWYL
Trigger: CAAATACCAATAGCAGTGCCAGTAATATGCCGGGCA...TAATGCCAGCTCATCTGTAGAGCGCCTTCTTGAAGACAATGTATCACTGTAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp ACCCTGCCAGCTTATTGTGTGATGTTTTCTAGGATACTTGCTCACAACCCTCCTGTGACAAATATCATCTaGAACCTGAATAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TLPAYCVMFSRILAHNPPVTNII*NLNSSC
Trigger: ACAGCTGCTATTCAGGTTCCAGATGATATTTGTCAC...AGGAGGGTTGTGAGCAAGTATCCTAGAAAACATCACACAATAAGCTGGCAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CCA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCAACTTTAATTTTCTCTTaGTTTGAGTGCAGCGATTCC +
Preference number: 4 (lower is better)
Translates to: ISGSVSPITGWQNTELNATLIFS*FECSDS
Trigger: GGAATCGCTGCACTCAAACCAAGAGAAAATTAAAGT...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR GCA 90 bp ACTGATGCTCAGGATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTATTCTCTTGGTTTGAGTaGAGCGATTCCTCTACTGAT +
Preference number: 4 (lower is better)
Translates to: TDAQDSITRRNLLSRYRLFSWFE*SDSSTD
Trigger: ATCAGTAGAGGAATCGCTGCACTCAAACCAAGAGAA...TAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATCCTGAGCATCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CCA 90 bp GGTAGGATGATGGTGCCTGGAGGCCTGTGCCTTCCCCATTACACCTaGGTCTTCGGGGGTTTGGGTGTTGACCTCGGTCACGCCAGTTGG +
Preference number: 5 (lower is better)
Translates to: GRMMVPGGLCLPHYT*VFGGLGVDLGHASW
Trigger: CCAACTGGCGTGACCGAGGTCAACACCCAAACCCCCGAAGACCCAGGTGTAATGGGGAAGGCACAGGCCTCCAGGCACCATCATCCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp TGGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGACACCCGCACTTGCTGCGATTaGCTCCTGCGGTGGTGCGGT +
Preference number: 5 (lower is better)
Translates to: WQWAYAHPTYTAETHSDTRTCCD*LLRWCG
Trigger: ACCGCACCACCGCAGGAGCAAATCGCAGCAAGTGCG...GGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CCA 90 bp CGGGGCTTCTGCTGGGGATTTGGGTGGCGAAGGTGCTTCCTCAGTTaGTTCTGCCTCCTCCAGACTCTGGAGAACCTCATGGAACCTGCC +
Preference number: 5 (lower is better)
Translates to: RGFCWGFGWRRCFLS*FCLLQTLENLMEPA
Trigger: GGCAGGTTCCATGAGGTTCTCCAGAGTCTGGAGGAGGCAGAACCAACTGAGGAAGCACCTTCGCCACCCAAATCCCCAGCAGAAGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS GCA 90 bp GCTCTCCCTGCGCCAGGTGACTGTGATTACTCCCACCTATCTCCCTaGTGCTCTGAGCTCTGTTCTCCTGCCTTGGAATCGAGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: ALPAPGDCDYSHLSP*CSELCSPALESRQG
Trigger: TCCCTGCCTCGATTCCAAGGCAGGAGAACAGAGCTCAGAGCAGCAGGGAGATAGGTGGGAGTAATCACAGTCACCTGGCGCAGGGAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS GCA 90 bp GAAAGACAGCGAGTAGGTGGTAGGATGATGGTGCCTGGAGGCCTGTaGCTTCCCCATTACACCTGGGTCTTCGGGGGTTTGGGTGTTGAC +
Preference number: 5 (lower is better)
Translates to: ERQRVGGRMMVPGGL*LPHYTWVFGGLGVD
Trigger: GTCAACACCCAAACCCCCGAAGACCCAGGTGTAATGGGGAAGGCACAGGCCTCCAGGCACCATCATCCTACCACCTACTCGCTGTCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS GCA 90 bp CTCCCTGCGCCAGGTGACTGTGATTACTCCCACCTATCTCCCTGCTaGTCTGAGCTCTGTTCTCCTGCCTTGGAATCGAGGCAGGGAGTT +
Preference number: 5 (lower is better)
Translates to: LPAPGDCDYSHLSPC*SELCSPALESRQGV
Trigger: AACTCCCTGCCTCGATTCCAAGGCAGGAGAACAGAGCTCAGAGCAGCAGGGAGATAGGTGGGAGTAATCACAGTCACCTGGCGCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS GCA 90 bp TTCTGCTGGGGATTTGGGTGGCGAAGGTGCTTCCTCAGTTGGTTCTaGCTCCTCCAGACTCTGGAGAACCTCATGGAACCTGCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: FCWGFGWRRCFLSWF*LLQTLENLMEPAFL
Trigger: CAGGAAGGCAGGTTCCATGAGGTTCTCCAGAGTCTGGAGGAGGCAGAACCAACTGAGGAAGCACCTTCGCCACCCAAATCCCCAGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CCA 90 bp CTGGAGGCCTGTGCCTTCCCCATTACACCTGGGTCTTCGGGGGTTTaGGTGTTGACCTCGGTCACGCCAGTTGGATTCTTAATGTTGCCA +
Preference number: 5 (lower is better)
Translates to: LEACAFPITPGSSGV*VLTSVTPVGFLMLP
Trigger: TGGCAACATTAAGAATCCAACTGGCGTGACCGAGGTCAACACCCAAACCCCCGAAGACCCAGGTGTAATGGGGAAGGCACAGGCCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CCA 90 bp GCTCACTTCCAACACCAGTCTGAAGCTCTGGGGTGTCTGACTGGCTaGGGAGCTTTGTCACATGTTCCCAGCACACAGGGACAGACTTGG +
Preference number: 5 (lower is better)
Translates to: AHFQHQSEALGCLTG*GALSHVPSTQGQTW
Trigger: CCAAGTCTGTCCCTGTGTGCTGGGAACATGTGACAAAGCTCCCCAGCCAGTCAGACACCCCAGAGCTTCAGACTGGTGTTGGAAGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp GGCAACCTTACTCTGCCACACCCCATACTTTACAAGAAGACAGCTGCACAGCTGCGCACTTGCTGCGATTaGCTCCTGCGGTGGTGCGGT +
Preference number: 5 (lower is better)
Translates to: GNLTLPHPILYKKTAAQLRTCCD*LLRWCG
Trigger: ACCGCACCACCGCAGGAGCAAATCGCAGCAAGTGCG...CAGCTGTGCAGCTGTCTTCTTGTAAAGTATGGGGTGTGGCAGAGTAAGGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp TCTGAGGCACTCCTGTCTCACAGGGCAAGGGGATCTCGGCCTGCGCTTTTGCAGGGAAGGCCAAGGTCTTaGTCATCAGGGTTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: SEALLSHRARGSRPALLQGRPRS*SSGLSL
Trigger: CAAAGACAACCCTGATGACAAAGACCTTGGCCTTCC...CTGCAAAAGCGCAGGCCGAGATCCCCTTGCCCTGTGAGACAGGAGTGCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp TGGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGACACCCACACAGGGACAGACTaGGATGCACTGCTACTTCTG +
Preference number: 5 (lower is better)
Translates to: WQWAYAHPTYTAETHSDTHTGTD*DALLLL
Trigger: CAGAAGTAGCAGTGCATCCAAGTCTGTCCCTGTGTG...GGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS TCA 90 bp AATGGGTGGGGGATTTTGAGCCTGCGAGGCCCATCCTCAAGATGCTaGGCCAGCCTCAGGAAGGCAAGGTCAGAGGACACAATATCCTGT +
Preference number: 5 (lower is better)
Translates to: NGWGILSLRGPSSRC*ASLRKARSEDTISC
Trigger: ACAGGATATTGTGTCCTCTGACCTTGCCTTCCTGAGGCTGGCTCAGCATCTTGAGGATGGGCCTCGCAGGCTCAAAATCCCCCACCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CCA 90 bp ACTCCCACCTATCTCCCTGCTGCTCTGAGCTCTGTTCTCCTGCCTTaGAATCGAGGCAGGGAGTTGCTCACTTCCAACACCAGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: TPTYLPAALSSVLLP*NRGRELLTSNTSLK
Trigger: CTTCAGACTGGTGTTGGAAGTGAGCAACTCCCTGCCTCGATTCCAAGGCAGGAGAACAGAGCTCAGAGCAGCAGGGAGATAGGTGGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp AATTGGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGACTCAGATAGGTTGCCGTaGACCTGGATGGCACTTGGG +
Preference number: 5 (lower is better)
Translates to: NWQWAYAHPTYTAETHSDSDRLP*TWMALG
Trigger: CCCAAGTGCCATCCAGGTCAACGGCAACCTATCTGA...GTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp GGCAACCTTACTCTGCCACACCCCATACTTTACAAGAAGACAGCTGCACAGCTGGCTTCTGCTGGGGATTaGGGTGGCGAAGGTGCTTCC +
Preference number: 5 (lower is better)
Translates to: GNLTLPHPILYKKTAAQLASAGD*GGEGAS
Trigger: GGAAGCACCTTCGCCACCCAAATCCCCAGCAGAAGC...CAGCTGTGCAGCTGTCTTCTTGTAAAGTATGGGGTGTGGCAGAGTAAGGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp GGGGGACCTGGCATTGTTAGGCTCTGCTCATTTCTGTTGTGCTTTTGGTACGGTGCTTCTGCTGGGGATTaGGGTGGCGAAGGTGCTTCC +
Preference number: 5 (lower is better)
Translates to: GGPGIVRLCSFLLCFWYGASAGD*GGEGAS
Trigger: GGAAGCACCTTCGCCACCCAAATCCCCAGCAGAAGC...ACCGTACCAAAAGCACAACAGAAATGAGCAGAGCCTAACAATGCCAGGTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS GCA 90 bp TCCTGCGGTGGTGCGGTTGTTTCACAAGCTCCACAGACTCAAGGCTaGTTCGCTTTAGGAGCACAGGCCTCACTTTCATACTTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: SCGGAVVSQAPQTQG*FALGAQASLSYFAG
Trigger: CCCAGCAAAGTATGAAAGTGAGGCCTGTGCTCCTAAAGCGAAGCAGCCTTGAGTCTGTGGAGCTTGTGAAACAACCGCACCACCGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CCA 90 bp TTGCCATCTTCCTTGAATCGCACTTGCTGCGATTTGCTCCTGCGGTaGTGCGGTTGTTTCACAAGCTCCACAGACTCAAGGCTGCTTCGC +
Preference number: 5 (lower is better)
Translates to: LPSSLNRTCCDLLLR*CGCFTSSTDSRLLR
Trigger: GCGAAGCAGCCTTGAGTCTGTGGAGCTTGTGAAACAACCGCACCACCGCAGGAGCAAATCGCAGCAAGTGCGATTCAAGGAAGATGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp TGGCAGTGGGCTTACGCACACCCCACGTACACAGCAGAGACTCACTCAGACACCATTTCCACCAGGGACTaGCTAGTCGTGAGTTTCTTC +
Preference number: 5 (lower is better)
Translates to: WQWAYAHPTYTAETHSDTISTRD*LVVSFF
Trigger: GAAGAAACTCACGACTAGCAAGTCCCTGGTGGAAAT...GGTGTCTGAGTGAGTCTCTGCTGTGTACGTGGGGTGTGCGTAAGCCCACTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp GCAGAACACAGAACTGAATGCAGAGGTATCCAAGCCTTGCCTCCTCTTCAGCCCTCAGATAGGTTGCCGTaGACCTGGATGGCACTTGGG +
Preference number: 5 (lower is better)
Translates to: AEHRTECRGIQALPPLQPSDRLP*TWMALG
Trigger: CCCAAGTGCCATCCAGGTCAACGGCAACCTATCTGA...GGGCTGAAGAGGAGGCAAGGCTTGGATACCTCTGCATTCAGTTCTGTGTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp CACACTGCTTTGGGAGTTTGCTTGGCATGCAAGCTTGACCGGACATCCATGAGTGACAGGCCCATTGCTTaGCACCTTGGGCATCCTAGG +
Preference number: 5 (lower is better)
Translates to: HTALGVCLACKLDRTSMSDRPIA*HLGHPR
Trigger: CCTAGGATGCCCAAGGTGCAAAGCAATGGGCCTGTC...ACTCATGGATGTCCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAGCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS TCA 90 bp AGGCAAGGTCAGAGGACACAATATCCTGTTCAGATAGGTTGCCGTTaGCCTGGATGGCACTTGGGGATGCTGTTGGCATTTCCACCAGGG +
Preference number: 5 (lower is better)
Translates to: RQGQRTQYPVQIGCR*PGWHLGMLLAFPPG
Trigger: CCCTGGTGGAAATGCCAACAGCATCCCCAAGTGCCATCCAGGTCAACGGCAACCTATCTGAACAGGATATTGTGTCCTCTGACCTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS GCA 90 bp CCATCTTCCTTGAATCGCACTTGCTGCGATTTGCTCCTGCGGTGGTaGGGTTGTTTCACAAGCTCCACAGACTCAAGGCTGCTTCGCTTT +
Preference number: 5 (lower is better)
Translates to: PSSLNRTCCDLLLRW*GCFTSSTDSRLLRF
Trigger: AAAGCGAAGCAGCCTTGAGTCTGTGGAGCTTGTGAAACAACCGCACCACCGCAGGAGCAAATCGCAGCAAGTGCGATTCAAGGAAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTGCGATTCGGGGGTTTGGGTGTaGACCTCGGTCACGCCAGTT +
Preference number: 5 (lower is better)
Translates to: TRRNLLSRYRLVWPKQCDSGVWV*TSVTPV
Trigger: AACTGGCGTGACCGAGGTCAACACCCAAACCCCCGA...ATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCATCGGGGGTTTGGGTGTaGACCTCGGTCACGCCAGTT +
Preference number: 5 (lower is better)
Translates to: ISGSVSPITGWQNTELNASGVWV*TSVTPV
Trigger: AACTGGCGTGACCGAGGTCAACACCCAAACCCCCGA...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTGCGATCGGAATCCTCCTGCCTaGTGGGACCTGGGGAAAGAC +
Preference number: 5 (lower is better)
Translates to: TRRNLLSRYRLVWPKQCDRNPPA*WDLGKD
Trigger: GTCTTTCCCCAGGTCCCACAAGGCAGGAGGATTCCG...ATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp GGGGGACCTGGCATTGTTAGGCTCTGCTCATTTCTGTTGTGCTTTTGGTACGGTAAGCTGACAGGCCCATaGCTTTGCACCTTGGGCATC +
Preference number: 5 (lower is better)
Translates to: GGPGIVRLCSFLLCFWYGKLTGP*LCTLGI
Trigger: GATGCCCAAGGTGCAAAGCAATGGGCCTGTCAGCTT...ACCGTACCAAAAGCACAACAGAAATGAGCAGAGCCTAACAATGCCAGGTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp GGGGGACCTGGCATTGTTAGGCTCTGCTCATTTCTGTTGTGCTTTTGGTACGGTCAGGTGCTGCAGTTGTaGAGATCTTGGCCAGTCCGA +
Preference number: 5 (lower is better)
Translates to: GGPGIVRLCSFLLCFWYGQVLQL*RSWPVR
Trigger: TCGGACTGGCCAAGATCTCAACAACTGCAGCACCTG...ACCGTACCAAAAGCACAACAGAAATGAGCAGAGCCTAACAATGCCAGGTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS TCA 90 bp TGGACACATGGAGATCAAAGCAGGTATAGAGTTGCTCTCTTCAGCTaGGCTTTCTGGGCTGAGAGCCGACTCTCTAGCTTCCCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: WTHGDQSRYRVALFS*AFWAESRLSSFPGW
Trigger: CCAACCTGGGAAGCTAGAGAGTCGGCTCTCAGCCCAGAAAGCTCAGCTGAAGAGAGCAACTCTATACCTGCTTTGATCTCCATGTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS TCA 90 bp ACAGACTTGGATGCACTGCTACTTCTGAGTGACTCCAGGTCCTGGTaGTTGTCACCTGAGGCTGGGCAATCAGAAGATCTTCCTAGGTGG +
Preference number: 5 (lower is better)
Translates to: TDLDALLLLSDSRSW*LSPEAGQSEDLPRW
Trigger: CCACCTAGGAAGATCTTCTGATTGCCCAGCCTCAGGTGACAATCACCAGGACCTGGAGTCACTCAGAAGTAGCAGTGCATCCAAGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CCA 90 bp AGGTCAGAGGACACAATATCCTGTTCAGATAGGTTGCCGTTGACCTaGATGGCACTTGGGGATGCTGTTGGCATTTCCACCAGGGACTTG +
Preference number: 5 (lower is better)
Translates to: RSEDTISCSDRLPLT*MALGDAVGISTRDL
Trigger: CAAGTCCCTGGTGGAAATGCCAACAGCATCCCCAAGTGCCATCCAGGTCAACGGCAACCTATCTGAACAGGATATTGTGTCCTCTGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CCA 90 bp GCTTCCTCAGTTGGTTCTGCCTCCTCCAGACTCTGGAGAACCTCATaGAACCTGCCTTCCTGCTGCCGGAAATCATACTCTACACTGTAT +
Preference number: 5 (lower is better)
Translates to: ASSVGSASSRLWRTS*NLPSCCRKSYSTLY
Trigger: ATACAGTGTAGAGTATGATTTCCGGCAGCAGGAAGGCAGGTTCCATGAGGTTCTCCAGAGTCTGGAGGAGGCAGAACCAACTGAGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp CACTGCTGGGGCCAACTGAGAGTTGAGTGTGTGGATACAGAAAGAAAGATCTGTCCTGCGGTGGTGCGGTaGTTTCACAAGCTCCACAGA +
Preference number: 5 (lower is better)
Translates to: HCWGQLRVECVDTERKICPAVVR*FHKLHR
Trigger: TCTGTGGAGCTTGTGAAACAACCGCACCACCGCAGG...ACAGATCTTTCTTTCTGTATCCACACACTCAACTCTCAGTTGGCCCCAGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCACCTGCGGTGGTGCGGTaGTTTCACAAGCTCCACAGA +
Preference number: 5 (lower is better)
Translates to: ISGSVSPITGWQNTELNAPAVVR*FHKLHR
Trigger: TCTGTGGAGCTTGTGAAACAACCGCACCACCGCAGG...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ACCCTGCCAGCTTATTGTGTGATGTTTTCTAGGATACTTGCTCACAACCCTCCTCGGAATCCTCCTGCCTaGTGGGACCTGGGGAAAGAC +
Preference number: 5 (lower is better)
Translates to: TLPAYCVMFSRILAHNPPRNPPA*WDLGKD
Trigger: GTCTTTCCCCAGGTCCCACAAGGCAGGAGGATTCCG...AGGAGGGTTGTGAGCAAGTATCCTAGAAAACATCACACAATAAGCTGGCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp CACACTGCTTTGGGAGTTTGCTTGGCATGCAAGCTTGACCGGACATCCATGAGTTCCTGTTCAGATAGGTaGCCGTTGACCTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: HTALGVCLACKLDRTSMSSCSDR*PLTWMA
Trigger: TGCCATCCAGGTCAACGGCAACCTATCTGAACAGGA...ACTCATGGATGTCCGGTCAAGCTTGCATGCCAAGCAAACTCCCAAAGCAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp GGGGGACCTGGCATTGTTAGGCTCTGCTCATTTCTGTTGTGCTTTTGGTACGGTTCCTGTTCAGATAGGTaGCCGTTGACCTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: GGPGIVRLCSFLLCFWYGSCSDR*PLTWMA
Trigger: TGCCATCCAGGTCAACGGCAACCTATCTGAACAGGA...ACCGTACCAAAAGCACAACAGAAATGAGCAGAGCCTAACAATGCCAGGTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp CACTGCTGGGGCCAACTGAGAGTTGAGTGTGTGGATACAGAAAGAAAGATCTGTGACAGGCCCATTGCTTaGCACCTTGGGCATCCTAGG +
Preference number: 5 (lower is better)
Translates to: HCWGQLRVECVDTERKICDRPIA*HLGHPR
Trigger: CCTAGGATGCCCAAGGTGCAAAGCAATGGGCCTGTC...ACAGATCTTTCTTTCTGTATCCACACACTCAACTCTCAGTTGGCCCCAGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS GCA 90 bp ACGCCAGTTGGATTCTTAATGTTGCCATCTTCCTTGAATCGCACTTaGTGCGATTTGCTCCTGCGGTGGTGCGGTTGTTTCACAAGCTCC +
Preference number: 5 (lower is better)
Translates to: TPVGFLMLPSSLNRT*CDLLLRWCGCFTSS
Trigger: GGAGCTTGTGAAACAACCGCACCACCGCAGGAGCAAATCGCAGCAAGTGCGATTCAAGGAAGATGGCAACATTAAGAATCCAACTGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS GCA 90 bp GCCTCCTCCAGACTCTGGAGAACCTCATGGAACCTGCCTTCCTGCTaGCGGAAATCATACTCTACACTGTATATGATGCATGCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: ASSRLWRTSWNLPSC*RKSYSTLYMMHAVF
Trigger: GAACACAGCATGCATCATATACAGTGTAGAGTATGATTTCCGGCAGCAGGAAGGCAGGTTCCATGAGGTTCTCCAGAGTCTGGAGGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCACACTTGGGGATGCTGTaGGCATTTCCACCAGGGACT +
Preference number: 5 (lower is better)
Translates to: ISGSVSPITGWQNTELNAHLGML*AFPPGT
Trigger: AGTCCCTGGTGGAAATGCCAACAGCATCCCCAAGTG...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTGCGATAAGCTGACAGGCCCATaGCTTTGCACCTTGGGCATC +
Preference number: 5 (lower is better)
Translates to: TRRNLLSRYRLVWPKQCDKLTGP*LCTLGI
Trigger: GATGCCCAAGGTGCAAAGCAATGGGCCTGTCAGCTT...ATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp CACTGCTGGGGCCAACTGAGAGTTGAGTGTGTGGATACAGAAAGAAAGATCTGTCTCTGTTCTCCTGCCTaGGAATCGAGGCAGGGAGTT +
Preference number: 5 (lower is better)
Translates to: HCWGQLRVECVDTERKICLCSPA*ESRQGV
Trigger: AACTCCCTGCCTCGATTCCAAGGCAGGAGAACAGAG...ACAGATCTTTCTTTCTGTATCCACACACTCAACTCTCAGTTGGCCCCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCACAGGTGCTGCAGTTGTaGAGATCTTGGCCAGTCCGA +
Preference number: 5 (lower is better)
Translates to: ISGSVSPITGWQNTELNAQVLQL*RSWPVR
Trigger: TCGGACTGGCCAAGATCTCAACAACTGCAGCACCTG...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCATGGCAGGTGCTGCAGTaGTTGAGATCTTGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: ISGSVSPITGWQNTELNAWQVLQ*LRSWPV
Trigger: GACTGGCCAAGATCTCAACAACTGCAGCACCTGCCA...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp GGGGGACCTGGCATTGTTAGGCTCTGCTCATTTCTGTTGTGCTTTTGGTACGGTTCATCAGGGTTGTCTTaGGGCAAAAGCAATTCGGGT +
Preference number: 5 (lower is better)
Translates to: GGPGIVRLCSFLLCFWYGSSGLS*GKSNSG
Trigger: ACCCGAATTGCTTTTGCCCAAAGACAACCCTGATGA...ACCGTACCAAAAGCACAACAGAAATGAGCAGAGCCTAACAATGCCAGGTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp GGGGGACCTGGCATTGTTAGGCTCTGCTCATTTCTGTTGTGCTTTTGGTACGGTGCAGTTGTTGAGATCTaGGCCAGTCCGATAGAAGTT +
Preference number: 5 (lower is better)
Translates to: GGPGIVRLCSFLLCFWYGAVVEI*ASPIEV
Trigger: AACTTCTATCGGACTGGCCAAGATCTCAACAACTGC...ACCGTACCAAAAGCACAACAGAAATGAGCAGAGCCTAACAATGCCAGGTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp AGGTATCCAAGCCTTGCCTCCTCTTCAGCCCCAGTAGGTAGCAATTACTTAATCCCATTGCTTTGCACCTaGGGCATCCTAGGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: RYPSLASSSAPVGSNYLIPLLCT*GILGRN
Trigger: ATTTCTCCCTAGGATGCCCAAGGTGCAAAGCAATGG...GATTAAGTAATTGCTACCTACTGGGGCTGAAGAGGAGGCAAGGCTTGGATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp AGGTATCCAAGCCTTGCCTCCTCTTCAGCCCCAGTAGGTAGCAATTACTTAATCGGAAGGCCAAGGTCTTaGTCATCAGGGTTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: RYPSLASSSAPVGSNYLIGRPRS*SSGLSL
Trigger: CAAAGACAACCCTGATGACAAAGACCTTGGCCTTCC...GATTAAGTAATTGCTACCTACTGGGGCTGAAGAGGAGGCAAGGCTTGGATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ACCCTGCCAGCTTATTGTGTGATGTTTTCTAGGATACTTGCTCACAACCCTCCTCACACAGGGACAGACTaGGATGCACTGCTACTTCTG +
Preference number: 5 (lower is better)
Translates to: TLPAYCVMFSRILAHNPPHTGTD*DALLLL
Trigger: CAGAAGTAGCAGTGCATCCAAGTCTGTCCCTGTGTG...AGGAGGGTTGTGAGCAAGTATCCTAGAAAACATCACACAATAAGCTGGCAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ATCTTAAGAAGCTCAAACTTTGTGGAAGAAGGCGCTTCCATCCTCATTCTCGGTCTCTGTTCTCCTGCCTaGGAATCGAGGCAGGGAGTT +
Preference number: 5 (lower is better)
Translates to: ILRSSNFVEEGASILILGLCSPA*ESRQGV
Trigger: AACTCCCTGCCTCGATTCCAAGGCAGGAGAACAGAG...ACCGAGAATGAGGATGGAAGCGCCTTCTTCCACAAAGTTTGAGCTTCTTAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp CCTTACAGTGATACATTGTCTTCAAGAAGGCGCTCTACAGATGAGCTGGCATTATGGCAGGTGCTGCAGTaGTTGAGATCTTGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: PYSDTLSSRRRSTDELALWQVLQ*LRSWPV
Trigger: GACTGGCCAAGATCTCAACAACTGCAGCACCTGCCA...TAATGCCAGCTCATCTGTAGAGCGCCTTCTTGAAGACAATGTATCACTGTAAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp CACTGCTGGGGCCAACTGAGAGTTGAGTGTGTGGATACAGAAAGAAAGATCTGTTTCTTCTTCACCTTCTaGCTCTTCCGCCGTAAGTCC +
Preference number: 5 (lower is better)
Translates to: HCWGQLRVECVDTERKICFFFTF*LFRRKS
Trigger: GGACTTACGGCGGAAGAGCAAGAAGGTGAAGAAGAA...ACAGATCTTTCTTTCTGTATCCACACACTCAACTCTCAGTTGGCCCCAGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ATCTTAAGAAGCTCAAACTTTGTGGAAGAAGGCGCTTCCATCCTCATTCTCGGTTTCCTTGAATCGCACTaGCTGCGATTTGCTCCTGCG +
Preference number: 5 (lower is better)
Translates to: ILRSSNFVEEGASILILGFLESH*LRFAPA
Trigger: CGCAGGAGCAAATCGCAGCAAGTGCGATTCAAGGAA...ACCGAGAATGAGGATGGAAGCGCCTTCTTCCACAAAGTTTGAGCTTCTTAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp CACTGCTGGGGCCAACTGAGAGTTGAGTGTGTGGATACAGAAAGAAAGATCTGTGCAGTTGTTGAGATCTaGGCCAGTCCGATAGAAGTT +
Preference number: 5 (lower is better)
Translates to: HCWGQLRVECVDTERKICAVVEI*ASPIEV
Trigger: AACTTCTATCGGACTGGCCAAGATCTCAACAACTGC...ACAGATCTTTCTTTCTGTATCCACACACTCAACTCTCAGTTGGCCCCAGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS TCA 90 bp GGTCTTTGTCATCAGGGTTGTCTTTGGGCAAAAGCAATTCGGGTGTaGGTTTTTCTGTGCCCGGCATATTACTGGCACTGCTATTGGTAT +
Preference number: 5 (lower is better)
Translates to: GLCHQGCLWAKAIRV*VFLCPAYYWHCYWY
Trigger: ATACCAATAGCAGTGCCAGTAATATGCCGGGCACAGAAAAACTCACACCCGAATTGCTTTTGCCCAAAGACAACCCTGATGACAAAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ACTGATGCTCAGGATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTACACTTGGGGATGCTGTaGGCATTTCCACCAGGGACT +
Preference number: 5 (lower is better)
Translates to: TDAQDSITRRNLLSRYRLHLGML*AFPPGT
Trigger: AGTCCCTGGTGGAAATGCCAACAGCATCCCCAAGTG...TAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATCCTGAGCATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCAAAAGCAGGTATAGAGTaGCTCTCTTCAGCTGAGCTT +
Preference number: 5 (lower is better)
Translates to: ISGSVSPITGWQNTELNAKAGIE*LSSAEL
Trigger: AAGCTCAGCTGAAGAGAGCAACTCTATACCTGCTTT...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp AGGTATCCAAGCCTTGCCTCCTCTTCAGCCCCAGTAGGTAGCAATTACTTAATCAAAGCAGGTATAGAGTaGCTCTCTTCAGCTGAGCTT +
Preference number: 5 (lower is better)
Translates to: RYPSLASSSAPVGSNYLIKAGIE*LSSAEL
Trigger: AAGCTCAGCTGAAGAGAGCAACTCTATACCTGCTTT...GATTAAGTAATTGCTACCTACTGGGGCTGAAGAGGAGGCAAGGCTTGGATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ATTTCTGGCAGTGTCAGTCCAATCACAGGCTGGCAGAACACAGAACTGAATGCAGAACACACATCTTCTTaGACTGAGATGATGGAAGGC +
Preference number: 5 (lower is better)
Translates to: ISGSVSPITGWQNTELNAEHTSS*TEMMEG
Trigger: GCCTTCCATCATCTCAGTCAAAGAAGATGTGTGTTC...TGCATTCAGTTCTGTGTTCTGCCAGCCTGTGATTGGACTGACACTGCCAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTGCGATGTTGGATTCTTAATGTaGCCATCTTCCTTGAATCGC +
Preference number: 5 (lower is better)
Translates to: TRRNLLSRYRLVWPKQCDVGFLM*PSSLNR
Trigger: GCGATTCAAGGAAGATGGCAACATTAAGAATCCAAC...ATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTGTGGCCTAAGCAGTGCGATGTGAGTTTCTTCCTTTaGAAAACGGGGAAATGCTTC +
Preference number: 5 (lower is better)
Translates to: TRRNLLSRYRLVWPKQCDVSFFL*KTGKCF
Trigger: GAAGCATTTCCCCGTTTTCAAAAGGAAGAAACTCAC...ATCGCACTGCTTAGGCCACACTAATCTATACCTGGAGAGAAGGTTCCTTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp AGGTATCCAAGCCTTGCCTCCTCTTCAGCCCCAGTAGGTAGCAATTACTTAATCGTGAGTTTCTTCCTTTaGAAAACGGGGAAATGCTTC +
Preference number: 5 (lower is better)
Translates to: RYPSLASSSAPVGSNYLIVSFFL*KTGKCF
Trigger: GAAGCATTTCCCCGTTTTCAAAAGGAAGAAACTCAC...GATTAAGTAATTGCTACCTACTGGGGCTGAAGAGGAGGCAAGGCTTGGATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp CCTTACAGTGATACATTGTCTTCAAGAAGGCGCTCTACAGATGAGCTGGCATTATCATCAGGGTTGTCTTaGGGCAAAAGCAATTCGGGT +
Preference number: 5 (lower is better)
Translates to: PYSDTLSSRRRSTDELALSSGLS*GKSNSG
Trigger: ACCCGAATTGCTTTTGCCCAAAGACAACCCTGATGA...TAATGCCAGCTCATCTGTAGAGCGCCTTCTTGAAGACAATGTATCACTGTAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp CACTGCTGGGGCCAACTGAGAGTTGAGTGTGTGGATACAGAAAGAAAGATCTGTTCTTTGTCATCAGGGTaGTCTTTGGGCAAAAGCAAT +
Preference number: 5 (lower is better)
Translates to: HCWGQLRVECVDTERKICSLSSG*SLGKSN
Trigger: ATTGCTTTTGCCCAAAGACAACCCTGATGACAAAGA...ACAGATCTTTCTTTCTGTATCCACACACTCAACTCTCAGTTGGCCCCAGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ACTGATGCTCAGGATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTACCATTGCTTTGCACCTaGGGCATCCTAGGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: TDAQDSITRRNLLSRYRLPLLCT*GILGRN
Trigger: ATTTCTCCCTAGGATGCCCAAGGTGCAAAGCAATGG...TAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATCCTGAGCATCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ACCCTGCCAGCTTATTGTGTGATGTTTTCTAGGATACTTGCTCACAACCCTCCTTCTTTGTCATCAGGGTaGTCTTTGGGCAAAAGCAAT +
Preference number: 5 (lower is better)
Translates to: TLPAYCVMFSRILAHNPPSLSSG*SLGKSN
Trigger: ATTGCTTTTGCCCAAAGACAACCCTGATGACAAAGA...AGGAGGGTTGTGAGCAAGTATCCTAGAAAACATCACACAATAAGCTGGCAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ACTGATGCTCAGGATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTATTCTTCTTCACCTTCTaGCTCTTCCGCCGTAAGTCC +
Preference number: 5 (lower is better)
Translates to: TDAQDSITRRNLLSRYRLFFFTF*LFRRKS
Trigger: GGACTTACGGCGGAAGAGCAAGAAGGTGAAGAAGAA...TAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATCCTGAGCATCAGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS-3UTR CAA 90 bp ACTGATGCTCAGGATTCAATTACCAGAAGGAACCTTCTCTCCAGGTATAGATTAGTTGGATTCTTAATGTaGCCATCTTCCTTGAATCGC +
Preference number: 5 (lower is better)
Translates to: TDAQDSITRRNLLSRYRLVGFLM*PSSLNR
Trigger: GCGATTCAAGGAAGATGGCAACATTAAGAATCCAAC...TAATCTATACCTGGAGAGAAGGTTCCTTCTGGTAATTGAATCCTGAGCATCAGT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CCA 72 bp ATGGTGCCTGGAGGCCTGTGCCTTCCCCATTACACCTaGGTCTTCGGGGGTTTGGGTGTTGACCTCGGTCAC +
Preference number: 6 (lower is better)
Translates to: MVPGGLCLPHYT*VFGGLGVDLGH
Trigger: GTGACCGAGGTCAACACCCAAACCCCCGAAGACCCAGGTGTAATGGGGAAGGCACAGGCCTCCAGGCACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 90 bp CCGGGGCTTCTGCTGGGGATTTGGGTGGCGAAGGTGCTTCCTCAGTaGGTTCTGCCTCCTCCAGACTCTGGAGAACCTCATGGAACCTGC +
Preference number: 6 (lower is better)
Translates to: PGLLLGIWVAKVLPQ*VLPPPDSGEPHGTC
Trigger: GCAGGTTCCATGAGGTTCTCCAGAGTCTGGAGGAGGCAGAACCAACTGAGGAAGCACCTTCGCCACCCAAATCCCCAGCAGAAGCCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS GCA 72 bp CGAGTAGGTGGTAGGATGATGGTGCCTGGAGGCCTGTaGCTTCCCCATTACACCTGGGTCTTCGGGGGTTTG +
Preference number: 6 (lower is better)
Translates to: RVGGRMMVPGGL*LPHYTWVFGGL
Trigger: CAAACCCCCGAAGACCCAGGTGTAATGGGGAAGGCACAGGCCTCCAGGCACCATCATCCTACCACCTACTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CCA 72 bp TCACCTGAGGCTGGGCAATCAGAAGATCTTCCTAGGTaGACTGGCTGGCTACGGGAGCCTGGCTCAGGCGAA +
Preference number: 6 (lower is better)
Translates to: SPEAGQSEDLPR*TGWLREPGSGE
Trigger: TTCGCCTGAGCCAGGCTCCCGTAGCCAGCCAGTCCACCTAGGAAGATCTTCTGATTGCCCAGCCTCAGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 90 bp CCTGGAGGCCTGTGCCTTCCCCATTACACCTGGGTCTTCGGGGGTTaGGGTGTTGACCTCGGTCACGCCAGTTGGATTCTTAATGTTGCC +
Preference number: 6 (lower is better)
Translates to: PGGLCLPHYTWVFGG*GVDLGHASWILNVA
Trigger: GGCAACATTAAGAATCCAACTGGCGTGACCGAGGTCAACACCCAAACCCCCGAAGACCCAGGTGTAATGGGGAAGGCACAGGCCTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS TCA 72 bp GGGATTTTGAGCCTGCGAGGCCCATCCTCAAGATGCTaGGCCAGCCTCAGGAAGGCAAGGTCAGAGGACACA +
Preference number: 6 (lower is better)
Translates to: GILSLRGPSSRC*ASLRKARSEDT
Trigger: TGTGTCCTCTGACCTTGCCTTCCTGAGGCTGGCTCAGCATCTTGAGGATGGGCCTCGCAGGCTCAAAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS GCA 72 bp GCGCCAGGTGACTGTGATTACTCCCACCTATCTCCCTaGTGCTCTGAGCTCTGTTCTCCTGCCTTGGAATCG +
Preference number: 6 (lower is better)
Translates to: APGDCDYSHLSP*CSELCSPALES
Trigger: CGATTCCAAGGCAGGAGAACAGAGCTCAGAGCAGCAGGGAGATAGGTGGGAGTAATCACAGTCACCTGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CCA 72 bp CAACACCAGTCTGAAGCTCTGGGGTGTCTGACTGGCTaGGGAGCTTTGTCACATGTTCCCAGCACACAGGGA +
Preference number: 6 (lower is better)
Translates to: QHQSEALGCLTG*GALSHVPSTQG
Trigger: TCCCTGTGTGCTGGGAACATGTGACAAAGCTCCCCAGCCAGTCAGACACCCCAGAGCTTCAGACTGGTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 72 bp TCGCACTTGCTGCGATTTGCTCCTGCGGTGGTGCGGTaGTTTCACAAGCTCCACAGACTCAAGGCTGCTTCG +
Preference number: 6 (lower is better)
Translates to: SHLLRFAPAVVR*FHKLHRLKAAS
Trigger: CGAAGCAGCCTTGAGTCTGTGGAGCTTGTGAAACAACCGCACCACCGCAGGAGCAAATCGCAGCAAGTGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 72 bp CTGTGCCTTCCCCATTACACCTGGGTCTTCGGGGGTTaGGGTGTTGACCTCGGTCACGCCAGTTGGATTCTT +
Preference number: 6 (lower is better)
Translates to: LCLPHYTWVFGG*GVDLGHASWIL
Trigger: AAGAATCCAACTGGCGTGACCGAGGTCAACACCCAAACCCCCGAAGACCCAGGTGTAATGGGGAAGGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 90 bp GCCTGTGCCTTCCCCATTACACCTGGGTCTTCGGGGGTTTGGGTGTaGACCTCGGTCACGCCAGTTGGATTCTTAATGTTGCCATCTTCC +
Preference number: 6 (lower is better)
Translates to: ACAFPITPGSSGVWV*TSVTPVGFLMLPSS
Trigger: GGAAGATGGCAACATTAAGAATCCAACTGGCGTGACCGAGGTCAACACCCAAACCCCCGAAGACCCAGGTGTAATGGGGAAGGCACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS GCA 72 bp CCAGATTCTAAGCAGAAGCTGACAGGCCCATTGCTTTaGACCTTGGGCATCCTAGGGAGAAATGGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: PDSKQKLTGPLL*TLGILGRNGWG
Trigger: CCCCCACCCATTTCTCCCTAGGATGCCCAAGGTGCAAAGCAATGGGCCTGTCAGCTTCTGCTTAGAATCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS GCA 72 bp TTCTCTTGGTTTGAGTGCAGCGATTCCTCTACTGATTaGAGCCGGCCTTGGAGGTCACAGAGCTCTCCCTGC +
Preference number: 6 (lower is better)
Translates to: FSWFECSDSSTD*SRPWRSQSSPC
Trigger: GCAGGGAGAGCTCTGTGACCTCCAAGGCCGGCTGCAATCAGTAGAGGAATCGCTGCACTCAAACCAAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS GCA 72 bp GGATTTGGGTGGCGAAGGTGCTTCCTCAGTTGGTTCTaGCTCCTCCAGACTCTGGAGAACCTCATGGAACCT +
Preference number: 6 (lower is better)
Translates to: GFGWRRCFLSWF*LLQTLENLMEP
Trigger: AGGTTCCATGAGGTTCTCCAGAGTCTGGAGGAGGCAGAACCAACTGAGGAAGCACCTTCGCCACCCAAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CCA 72 bp TGTGCCTTCCCCATTACACCTGGGTCTTCGGGGGTTTaGGTGTTGACCTCGGTCACGCCAGTTGGATTCTTA +
Preference number: 6 (lower is better)
Translates to: CAFPITPGSSGV*VLTSVTPVGFL
Trigger: TAAGAATCCAACTGGCGTGACCGAGGTCAACACCCAAACCCCCGAAGACCCAGGTGTAATGGGGAAGGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CCA 72 bp TTGCTTTGCACCTTGGGCATCCTAGGGAGAAATGGGTaGGGGATTTTGAGCCTGCGAGGCCCATCCTCAAGA +
Preference number: 6 (lower is better)
Translates to: LLCTLGILGRNG*GILSLRGPSSR
Trigger: TCTTGAGGATGGGCCTCGCAGGCTCAAAATCCCCCACCCATTTCTCCCTAGGATGCCCAAGGTGCAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 90 bp TACTCCCACCTATCTCCCTGCTGCTCTGAGCTCTGTTCTCCTGCCTaGGAATCGAGGCAGGGAGTTGCTCACTTCCAACACCAGTCTGAA +
Preference number: 6 (lower is better)
Translates to: YSHLSPCCSELCSPA*ESRQGVAHFQHQSE
Trigger: TTCAGACTGGTGTTGGAAGTGAGCAACTCCCTGCCTCGATTCCAAGGCAGGAGAACAGAGCTCAGAGCAGCAGGGAGATAGGTGGGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS GCA 72 bp TTGAATCGCACTTGCTGCGATTTGCTCCTGCGGTGGTaGGGTTGTTTCACAAGCTCCACAGACTCAAGGCTG +
Preference number: 6 (lower is better)
Translates to: LNRTCCDLLLRW*GCFTSSTDSRL
Trigger: CAGCCTTGAGTCTGTGGAGCTTGTGAAACAACCGCACCACCGCAGGAGCAAATCGCAGCAAGTGCGATTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS GCA 72 bp GGGGGCATTCTTTCCAGCTCTGACGTCATCACTCTTTaGCCATCCCCTGGACACATGGAGATCAAAGCAGGT +
Preference number: 6 (lower is better)
Translates to: GGILSSSDVITL*PSPGHMEIKAG
Trigger: ACCTGCTTTGATCTCCATGTGTCCAGGGGATGGGCAAAGAGTGATGACGTCAGAGCTGGAAAGAATGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CCA 72 bp TCCTTGAATCGCACTTGCTGCGATTTGCTCCTGCGGTaGTGCGGTTGTTTCACAAGCTCCACAGACTCAAGG +
Preference number: 6 (lower is better)
Translates to: SLNRTCCDLLLR*CGCFTSSTDSR
Trigger: CCTTGAGTCTGTGGAGCTTGTGAAACAACCGCACCACCGCAGGAGCAAATCGCAGCAAGTGCGATTCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CCA 72 bp GTTGCCGTTGACCTGGATGGCACTTGGGGATGCTGTTaGCATTTCCACCAGGGACTTGCTAGTCGTGAGTTT +
Preference number: 6 (lower is better)
Translates to: VAVDLDGTWGCC*HFHQGLASREF
Trigger: AAACTCACGACTAGCAAGTCCCTGGTGGAAATGCCAACAGCATCCCCAAGTGCCATCCAGGTCAACGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 90 bp GGGGTTTGGGTGTTGACCTCGGTCACGCCAGTTGGATTCTTAATGTaGCCATCTTCCTTGAATCGCACTTGCTGCGATTTGCTCCTGCGG +
Preference number: 6 (lower is better)
Translates to: GVWVLTSVTPVGFLM*PSSLNRTCCDLLLR
Trigger: CCGCAGGAGCAAATCGCAGCAAGTGCGATTCAAGGAAGATGGCAACATTAAGAATCCAACTGGCGTGACCGAGGTCAACACCCAAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 90 bp TATGATGCATGCTGTGTTCTGGCAGGTGCTGCAGTTGTTGAGATCTaGGCCAGTCCGATAGAAGTTCCGCCCTTCAGTGAGAGCGTGAGC +
Preference number: 6 (lower is better)
Translates to: YDACCVLAGAAVVEI*ASPIEVPPFSESVS
Trigger: GCTCACGCTCTCACTGAAGGGCGGAACTTCTATCGGACTGGCCAAGATCTCAACAACTGCAGCACCTGCCAGAACACAGCATGCATCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS GCA 72 bp GGTGCGGTTGTTTCACAAGCTCCACAGACTCAAGGCTaGTTCGCTTTAGGAGCACAGGCCTCACTTTCATAC +
Preference number: 6 (lower is better)
Translates to: GAVVSQAPQTQG*FALGAQASLSY
Trigger: GTATGAAAGTGAGGCCTGTGCTCCTAAAGCGAAGCAGCCTTGAGTCTGTGGAGCTTGTGAAACAACCGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 72 bp ATGTTGCCATCTTCCTTGAATCGCACTTGCTGCGATTaGCTCCTGCGGTGGTGCGGTTGTTTCACAAGCTCC +
Preference number: 6 (lower is better)
Translates to: MLPSSLNRTCCD*LLRWCGCFTSS
Trigger: GGAGCTTGTGAAACAACCGCACCACCGCAGGAGCAAATCGCAGCAAGTGCGATTCAAGGAAGATGGCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 72 bp TTCCCCATTACACCTGGGTCTTCGGGGGTTTGGGTGTaGACCTCGGTCACGCCAGTTGGATTCTTAATGTTG +
Preference number: 6 (lower is better)
Translates to: FPITPGSSGVWV*TSVTPVGFLML
Trigger: CAACATTAAGAATCCAACTGGCGTGACCGAGGTCAACACCCAAACCCCCGAAGACCCAGGTGTAATGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 72 bp AGCTTTGTCACATGTTCCCAGCACACAGGGACAGACTaGGATGCACTGCTACTTCTGAGTGACTCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: SFVTCSQHTGTD*DALLLLSDSRS
Trigger: GGACCTGGAGTCACTCAGAAGTAGCAGTGCATCCAAGTCTGTCCCTGTGTGCTGGGAACATGTGACAAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 90 bp TTGACCTCGGTCACGCCAGTTGGATTCTTAATGTTGCCATCTTCCTaGAATCGCACTTGCTGCGATTTGCTCCTGCGGTGGTGCGGTTGT +
Preference number: 6 (lower is better)
Translates to: LTSVTPVGFLMLPSS*NRTCCDLLLRWCGC
Trigger: ACAACCGCACCACCGCAGGAGCAAATCGCAGCAAGTGCGATTCAAGGAAGATGGCAACATTAAGAATCCAACTGGCGTGACCGAGGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 90 bp AAGGCAAGGTCAGAGGACACAATATCCTGTTCAGATAGGTTGCCGTaGACCTGGATGGCACTTGGGGATGCTGTTGGCATTTCCACCAGG +
Preference number: 6 (lower is better)
Translates to: KARSEDTISCSDRLP*TWMALGDAVGISTR
Trigger: CCTGGTGGAAATGCCAACAGCATCCCCAAGTGCCATCCAGGTCAACGGCAACCTATCTGAACAGGATATTGTGTCCTCTGACCTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 90 bp CTCAGGAAGGCAAGGTCAGAGGACACAATATCCTGTTCAGATAGGTaGCCGTTGACCTGGATGGCACTTGGGGATGCTGTTGGCATTTCC +
Preference number: 6 (lower is better)
Translates to: LRKARSEDTISCSDR*PLTWMALGDAVGIS
Trigger: GGAAATGCCAACAGCATCCCCAAGTGCCATCCAGGTCAACGGCAACCTATCTGAACAGGATATTGTGTCCTCTGACCTTGCCTTCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 90 bp CTTTGCCCATCCCCTGGACACATGGAGATCAAAGCAGGTATAGAGTaGCTCTCTTCAGCTGAGCTTTCTGGGCTGAGAGCCGACTCTCTA +
Preference number: 6 (lower is better)
Translates to: LCPSPGHMEIKAGIE*LSSAELSGLRADSL
Trigger: TAGAGAGTCGGCTCTCAGCCCAGAAAGCTCAGCTGAAGAGAGCAACTCTATACCTGCTTTGATCTCCATGTGTCCAGGGGATGGGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 90 bp CACGCCAGTTGGATTCTTAATGTTGCCATCTTCCTTGAATCGCACTaGCTGCGATTTGCTCCTGCGGTGGTGCGGTTGTTTCACAAGCTC +
Preference number: 6 (lower is better)
Translates to: HASWILNVAIFLESH*LRFAPAVVRLFHKL
Trigger: GAGCTTGTGAAACAACCGCACCACCGCAGGAGCAAATCGCAGCAAGTGCGATTCAAGGAAGATGGCAACATTAAGAATCCAACTGGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS TCA 72 bp GATGCACTGCTACTTCTGAGTGACTCCAGGTCCTGGTaGTTGTCACCTGAGGCTGGGCAATCAGAAGATCTT +
Preference number: 6 (lower is better)
Translates to: DALLLLSDSRSW*LSPEAGQSEDL
Trigger: AAGATCTTCTGATTGCCCAGCCTCAGGTGACAATCACCAGGACCTGGAGTCACTCAGAAGTAGCAGTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CCA 72 bp GACACAATATCCTGTTCAGATAGGTTGCCGTTGACCTaGATGGCACTTGGGGATGCTGTTGGCATTTCCACC +
Preference number: 6 (lower is better)
Translates to: DTISCSDRLPLT*MALGDAVGIST
Trigger: GGTGGAAATGCCAACAGCATCCCCAAGTGCCATCCAGGTCAACGGCAACCTATCTGAACAGGATATTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 72 bp GTCACGCCAGTTGGATTCTTAATGTTGCCATCTTCCTaGAATCGCACTTGCTGCGATTTGCTCCTGCGGTGG +
Preference number: 6 (lower is better)
Translates to: VTPVGFLMLPSS*NRTCCDLLLRW
Trigger: CCACCGCAGGAGCAAATCGCAGCAAGTGCGATTCAAGGAAGATGGCAACATTAAGAATCCAACTGGCGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 72 bp GCAAGGTCAGAGGACACAATATCCTGTTCAGATAGGTaGCCGTTGACCTGGATGGCACTTGGGGATGCTGTT +
Preference number: 6 (lower is better)
Translates to: ARSEDTISCSDR*PLTWMALGDAV
Trigger: AACAGCATCCCCAAGTGCCATCCAGGTCAACGGCAACCTATCTGAACAGGATATTGTGTCCTCTGACCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 90 bp GGATTCTTAATGTTGCCATCTTCCTTGAATCGCACTTGCTGCGATTaGCTCCTGCGGTGGTGCGGTTGTTTCACAAGCTCCACAGACTCA +
Preference number: 6 (lower is better)
Translates to: GFLMLPSSLNRTCCD*LLRWCGCFTSSTDS
Trigger: TGAGTCTGTGGAGCTTGTGAAACAACCGCACCACCGCAGGAGCAAATCGCAGCAAGTGCGATTCAAGGAAGATGGCAACATTAAGAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS TCA 72 bp CAGAGGACACAATATCCTGTTCAGATAGGTTGCCGTTaGCCTGGATGGCACTTGGGGATGCTGTTGGCATTT +
Preference number: 6 (lower is better)
Translates to: QRTQYPVQIGCR*PGWHLGMLLAF
Trigger: AAATGCCAACAGCATCCCCAAGTGCCATCCAGGTCAACGGCAACCTATCTGAACAGGATATTGTGTCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS TCA 72 bp CATCAGGGTTGTCTTTGGGCAAAAGCAATTCGGGTGTaGGTTTTTCTGTGCCCGGCATATTACTGGCACTGC +
Preference number: 6 (lower is better)
Translates to: HQGCLWAKAIRV*VFLCPAYYWHC
Trigger: GCAGTGCCAGTAATATGCCGGGCACAGAAAAACTCACACCCGAATTGCTTTTGCCCAAAGACAACCCTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CCA 72 bp TTCTGGGCTGAGAGCCGACTCTCTAGCTTCCCAGGTTaGACTGTGACAAATATCATCTGGAACCTGAATAGC +
Preference number: 6 (lower is better)
Translates to: FWAESRLSSFPG*TVTNIIWNLNS
Trigger: GCTATTCAGGTTCCAGATGATATTTGTCACAGTCCAACCTGGGAAGCTAGAGAGTCGGCTCTCAGCCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 72 bp TCAGAGGACACAATATCCTGTTCAGATAGGTTGCCGTaGACCTGGATGGCACTTGGGGATGCTGTTGGCATT +
Preference number: 6 (lower is better)
Translates to: SEDTISCSDRLP*TWMALGDAVGI
Trigger: AATGCCAACAGCATCCCCAAGTGCCATCCAGGTCAACGGCAACCTATCTGAACAGGATATTGTGTCCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 72 bp GTGTTGACCTCGGTCACGCCAGTTGGATTCTTAATGTaGCCATCTTCCTTGAATCGCACTTGCTGCGATTTG +
Preference number: 6 (lower is better)
Translates to: VLTSVTPVGFLM*PSSLNRTCCDL
Trigger: CAAATCGCAGCAAGTGCGATTCAAGGAAGATGGCAACATTAAGAATCCAACTGGCGTGACCGAGGTCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS GCA 72 bp CTGCCGGAAATCATACTCTACACTGTATATGATGCATaGTGTGTTCTGGCAGGTGCTGCAGTTGTTGAGATC +
Preference number: 6 (lower is better)
Translates to: LPEIILYTVYDA*CVLAGAAVVEI
Trigger: GATCTCAACAACTGCAGCACCTGCCAGAACACAGCATGCATCATATACAGTGTAGAGTATGATTTCCGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS GCA 72 bp AGACTCTGGAGAACCTCATGGAACCTGCCTTCCTGCTaGCGGAAATCATACTCTACACTGTATATGATGCAT +
Preference number: 6 (lower is better)
Translates to: RLWRTSWNLPSC*RKSYSTLYMMH
Trigger: ATGCATCATATACAGTGTAGAGTATGATTTCCGGCAGCAGGAAGGCAGGTTCCATGAGGTTCTCCAGAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CCA 72 bp TCATACTCTACACTGTATATGATGCATGCTGTGTTCTaGCAGGTGCTGCAGTTGTTGAGATCTTGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: SYSTLYMMHAVF*QVLQLLRSWPV
Trigger: GACTGGCCAAGATCTCAACAACTGCAGCACCTGCCAGAACACAGCATGCATCATATACAGTGTAGAGTATGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9
CDS CAA 72 bp GATGGAAGGCCAAGGTCTTTGTCATCAGGGTTGTCTTaGGGCAAAAGCAATTCGGGTGTGAGTTTTTCTGTG +
Preference number: 6 (lower is better)
Translates to: DGRPRSLSSGLS*GKSNSGVSFSV
Trigger: CACAGAAAAACTCACACCCGAATTGCTTTTGCCCAAAGACAACCCTGATGACAAAGACCTTGGCCTTCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093192.4
ENSMUST00000165963.9