Pregenerated sensors for INSYN2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073805Ensembl transcript IDs: ENSMUST00000171394.3
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCAAGGGGCGACAGTCACTCCCTTGCTGCTGATTATCTGTTGGTaGGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGC | + |
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Preference number: 1 (lower is better) Translates to: WQGATVTPLLLIICW*EGLFGTQGEKQGAR Trigger: GCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTGACTGTCGCCCCTTGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| 3UTR CCA 90 bp | AGCTGGCAAGGGGCGACAGTCACTCCCTTGCTGCTGATTATCTGTTaGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: SWQGATVTPLLLIIC*CEGLFGTQGEKQGA Trigger: TGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTGACTGTCGCCCCTTGCCAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| 3UTR TCA 90 bp | CGCAGGGCGAGAAGCAGGGAGCACGCGTTGGCACCGCAGTTTCCTTaGTCCTATCCGATTCGGAAAAGGACTCACTTAAATCCCAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: RRARSREHALAPQFP*SYPIRKRTHLNPSG Trigger: CCCACTGGGATTTAAGTGAGTCCTTTTCCGAATCGGATAGGATCAAGGAAACTGCGGTGCCAACGCGTGCTCCCTGCTTCTCGCCCTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| 3UTR TCA 90 bp | CTGCAAAGGACAGCTGGCAAGGGGCGACAGTCACTCCCTTGCTGCTaGTTATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGA | + |
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Preference number: 1 (lower is better) Translates to: LQRTAGKGRQSLPCC*LSVGAKAFLVRRAR Trigger: TCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTGACTGTCGCCCCTTGCCAGCTGTCCTTTGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| 3UTR CCA 90 bp | CGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTaGCACCGCAGTTTCCTTGATCCTATCCGATTCGGAAAAGGACTC | + |
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Preference number: 1 (lower is better) Translates to: RRPFWYAGREAGSTR*HRSFLDPIRFGKGL Trigger: GAGTCCTTTTCCGAATCGGATAGGATCAAGGAAACTGCGGTGCCAACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| 3UTR CAA 90 bp | CAGCTGGCAAGGGGCGACAGTCACTCCCTTGCTGCTGATTATCTGTaGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: QLARGDSHSLAADYL*VRRPFWYAGREAGS Trigger: GCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTGACTGTCGCCCCTTGCCAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| 3UTR CAA 90 bp | ACGCAGGGCGAGAAGCAGGGAGCACGCGTTGGCACCGCAGTTTCCTaGATCCTATCCGATTCGGAAAAGGACTCACTTAAATCCCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: TQGEKQGARVGTAVS*ILSDSEKDSLKSQW Trigger: CCACTGGGATTTAAGTGAGTCCTTTTCCGAATCGGATAGGATCAAGGAAACTGCGGTGCCAACGCGTGCTCCCTGCTTCTCGCCCTGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| 3UTR CCA 72 bp | TTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTaGCACCGCAGTTTCCTTGATCCTATCCGATTCGGA | + |
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Preference number: 3 (lower is better) Translates to: FWYAGREAGSTR*HRSFLDPIRFG Trigger: TCCGAATCGGATAGGATCAAGGAAACTGCGGTGCCAACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| 3UTR CCA 72 bp | GGGGCGACAGTCACTCCCTTGCTGCTGATTATCTGTTaGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: GATVTPLLLIIC*CEGLFGTQGEK Trigger: CTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTGACTGTCGCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| 3UTR TCA 72 bp | ACAGCTGGCAAGGGGCGACAGTCACTCCCTTGCTGCTaGTTATCTGTTGGTGCGAAGGCCTTTTTGGTACGC | + |
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Preference number: 3 (lower is better) Translates to: TAGKGRQSLPCC*LSVGAKAFLVR Trigger: GCGTACCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTGACTGTCGCCCCTTGCCAGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| 3UTR GCA 72 bp | GCGACAGTCACTCCCTTGCTGCTGATTATCTGTTGGTaGGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: ATVTPLLLIICW*EGLFGTQGEKQ Trigger: CTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTGACTGTCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CCA 90 bp | AGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTGGCACCGCAGTCCTGCAGCTGGTGGATaGGCTCCTCAGAGGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RPFWYAGREAGSTRWHRSPAAGG*APQREA Trigger: GGCCTCCCTCTGAGGAGCCCATCCACCAGCTGCAGG...ACTGCGGTGCCAACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR TCA 90 bp | ATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCTGGAGCCGGCTCCTCTaGGTCCAGGGTGCCCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: ICWCEGLFGTQGEKQGARWSRLL*VQGAPV Trigger: GACAGGGGCACCCTGGACTCAGAGGAGCCGGCTCCA...GCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR GCA 90 bp | ATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCTGGGCGGCTCGCCTCTaGTCCTCATCTGCAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: ICWCEGLFGTQGEKQGARWAARL*SSSAGQ Trigger: CTGCCCTGCAGATGAGGAGCAGAGGCGAGCCGCCCA...GCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR GCA 90 bp | CGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTGGCACCGCGCTTTTGAAGGCATCTaGAGCCGGCAGGCCTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: RRPFWYAGREAGSTRWHRAFEGI*SRQAFE Trigger: CTCAAAGGCCTGCCGGCTGCAGATGCCTTCAAAAGC...GCGGTGCCAACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CCA 90 bp | ATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGCTGTGGGGCTAGGCTaGTTCTGCAGGGGCTGTTCG | + |
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Preference number: 4 (lower is better) Translates to: ICWCEGLFGTQGEKQGARAVGLG*FCRGCS Trigger: CGAACAGCCCCTGCAGAACCAGCCTAGCCCCACAGC...GCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CCA 90 bp | AGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTGGCACCGCAGTTCCATCACCTGCAGCTaGGCCTTGAGGTCTACCACC | + |
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Preference number: 4 (lower is better) Translates to: RPFWYAGREAGSTRWHRSSITCS*ALRSTT Trigger: GGTGGTAGACCTCAAGGCCCAGCTGCAGGTGATGGA...ACTGCGGTGCCAACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR TCA 90 bp | TGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTCAGCCGGCAGGCCTTTaGGACTGCCTTTCTTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: CWCEGLFGTQGEKQGARVQPAGL*DCLSCG Trigger: ACCGCAAGAAAGGCAGTCTCAAAGGCCTGCCGGCTG...AACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR TCA 90 bp | CGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTGGCACCGCCATTGTTCTGGCTTTTaGAGGCATCTGCAGCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: RRPFWYAGREAGSTRWHRHCSGF*RHLQPA Trigger: TGCCGGCTGCAGATGCCTTCAAAAGCCAGAACAATG...GCGGTGCCAACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CCA 90 bp | TGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTTGCAGGACACAGCCTTaGCCTCTCGCTTCTCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: CWCEGLFGTQGEKQGARVCRTQP*PLASPP Trigger: TGGGGGAGAAGCGAGAGGCCAAGGCTGTGTCCTGCA...AACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CCA 90 bp | CGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTGGCACCGCAGAGAGACCACTGGCTaGCAGCAGCAGAGTTTGACA | + |
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Preference number: 4 (lower is better) Translates to: RRPFWYAGREAGSTRWHRRETTG*QQQSLT Trigger: TGTCAAACTCTGCTGCTGCCAGCCAGTGGTCTCTCT...GCGGTGCCAACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR TCA 90 bp | CGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTGGCACCGCAATGCGGTGGTCTTGTaGATCCTTCCTGCACTGCAA | + |
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Preference number: 4 (lower is better) Translates to: RRPFWYAGREAGSTRWHRNAVVL*ILPALQ Trigger: TTGCAGTGCAGGAAGGATTCACAAGACCACCGCATT...GCGGTGCCAACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR TCA 90 bp | CACTCCCTTGCTGCTGATTATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGACACCCTTCCGTGGGTaGGTGGAGCCGGCTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: HSLAADYLLVRRPFWYAGTPFRG*VEPAPL Trigger: CAGAGGAGCCGGCTCCACTCACCCACGGAAGGGTGT...CCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR TCA 90 bp | GGCGACAGTCACTCCCTTGCTGCTGATTATCTGTTGGTGCGAAGGCCTTTTTGGCAGGGGCCCTGGTACTaGTGGCAGGCGGATACACAG | + |
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Preference number: 4 (lower is better) Translates to: GDSHSLAADYLLVRRPFWQGPWY*WQADTQ Trigger: CTGTGTATCCGCCTGCCATCAGTACCAGGGCCCCTG...CCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTGACTGTCGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR TCA 90 bp | GGCGACAGTCACTCCCTTGCTGCTGATTATCTGTTGGTGCGAAGGCCTTTTTGGGGCAGCAGCAGAGTTTaGCAAGCCAGGCTCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GDSHSLAADYLLVRRPFWGSSRV*QARLRG Trigger: GCCCCTGAGCCTGGCTTGTCAAACTCTGCTGCTGCC...CCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTGACTGTCGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR GCA 90 bp | TGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTCTTGTGAATCCTTCCTaGACTGCAAGGCCGAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: CWCEGLFGTQGEKQGARVLVNPS*TARPRL Trigger: GAGCCTCGGCCTTGCAGTGCAGGAAGGATTCACAAG...AACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CCA 90 bp | TGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTGAAAGCCCTTCCCGATaGGCTTCTCCTTTCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: CWCEGLFGTQGEKQGARVESPSR*ASPFSS Trigger: GCTGGAGAAAGGAGAAGCCCATCGGGAAGGGCTTTC...AACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR TCA 90 bp | GATTATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCCACCGGTGCTCTTGGTaGCATTGGGAATGGATCGGC | + |
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Preference number: 4 (lower is better) Translates to: DYLLVRRPFWYAGREAGSHRCSW*HWEWIG Trigger: GCCGATCCATTCCCAATGTCACCAAGAGCACCGGTG...GCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CCA 90 bp | GATTATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCGGGCAGAGAGACCACTaGCTGGCAGCAGCAGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: DYLLVRRPFWYAGREAGSGQRDH*LAAAEF Trigger: AAACTCTGCTGCTGCCAGCCAGTGGTCTCTCTGCCC...GCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR TCA 90 bp | GGCGACAGTCACTCCCTTGCTGCTGATTATCTGTTGGTGCGAAGGCCTTTTTGGAGAGCTCTGCACAGTTaGCCCCAGAAGGCTGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: GDSHSLAADYLLVRRPFWRALHS*PQKAVP Trigger: TGGGACAGCCTTCTGGGGTCAACTGTGCAGAGCTCT...CCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTGACTGTCGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR GCA 90 bp | ATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCCCCAGTGCGTTCACGTaGTCATTGGAATGGAAAACC | + |
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Preference number: 4 (lower is better) Translates to: ICWCEGLFGTQGEKQGARPSAFT*SLEWKT Trigger: GGTTTTCCATTCCAATGAGCACGTGAACGCACTGGG...GCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CCA 90 bp | AGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTGGCACCGCAGTTCTCTCTGCTCATTCTaGGCCTCACAGATATCCTTA | + |
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Preference number: 4 (lower is better) Translates to: RPFWYAGREAGSTRWHRSSLCSF*ASQISL Trigger: TAAGGATATCTGTGAGGCCCAGAATGAGCAGAGAGA...ACTGCGGTGCCAACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CCA 90 bp | GGCGACAGTCACTCCCTTGCTGCTGATTATCTGTTGGTGCGAAGGCCTTTTTGGTTAAACACCCTTCCGTaGGTGAGTGGAGCCGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GDSHSLAADYLLVRRPFWLNTLP*VSGAGS Trigger: GGAGCCGGCTCCACTCACCCACGGAAGGGTGTTTAA...CCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTGACTGTCGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CCA 90 bp | CGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTGGCACCGCACTTTGATGGTCTCCTaGCTAGAGCTGATTAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: RRPFWYAGREAGSTRWHRTLMVS*LELIKF Trigger: GAACTTAATCAGCTCTAGCCAGGAGACCATCAAAGT...GCGGTGCCAACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| 3UTR CAA 72 bp | AGGGGCGACAGTCACTCCCTTGCTGCTGATTATCTGTaGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAA | + |
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Preference number: 4 (lower is better) Translates to: RGDSHSLAADYL*VRRPFWYAGRE Trigger: TTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTGACTGTCGCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR TCA 90 bp | GGCGACAGTCACTCCCTTGCTGCTGATTATCTGTTGGTGCGAAGGCCTTTTTGGGGTAAGGCGAAGGGATaGCCTGAGTTTCCTCGACAG | + |
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Preference number: 4 (lower is better) Translates to: GDSHSLAADYLLVRRPFWGKAKG*PEFPRQ Trigger: CTGTCGAGGAAACTCAGGTCATCCCTTCGCCTTACC...CCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTGACTGTCGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR GCA 90 bp | ATTATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCAAGATCTGGTGAGGTCTaGACACCGGTGCTCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: IICWCEGLFGTQGEKQGARSGEV*TPVLLV Trigger: CACCAAGAGCACCGGTGTGCAGACCTCACCAGATCT...TGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR GCA 90 bp | ATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCCAATTAGCTGTGTCTTaGCCCGTCCGATATGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: ICWCEGLFGTQGEKQGARQLAVS*PVRYES Trigger: GCTTTCATATCGGACGGGGCAAGACACAGCTAATTG...GCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR GCA 90 bp | TGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTATGTCTGGTAACACTTaGGAAGATCTGGTGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: CWCEGLFGTQGEKQGARVMSGNT*EDLVRS Trigger: AGACCTCACCAGATCTTCGCAAGTGTTACCAGACAT...AACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR GCA 90 bp | CACTCCCTTGCTGCTGATTATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGAAGTTCTCCATCACCTaGAGCTGGGCCTTGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: HSLAADYLLVRRPFWYAGKFSIT*SWALRS Trigger: AGACCTCAAGGCCCAGCTGCAGGTGATGGAGAACTT...CCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR GCA 90 bp | GATTATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACCAGAGTTTCCACCTaGCATGCTTTTTGGACTCAG | + |
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Preference number: 4 (lower is better) Translates to: DYLLVRRPFWYAGREAGSTRVST*HAFWTQ Trigger: CTGAGTCCAAAAAGCATGGCAGGTGGAAACTCTGGT...GCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CCA 90 bp | ATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCAGAAACCCATTGTTCTaGCTTTTGAAGGCATCTGCA | + |
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Preference number: 4 (lower is better) Translates to: ICWCEGLFGTQGEKQGARRNPLF*LLKASA Trigger: TGCAGATGCCTTCAAAAGCCAGAACAATGGGTTTCT...GCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CCA 90 bp | GATTATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGTGCTCATTGGAATaGAAAACCAATGCGGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: DYLLVRRPFWYAGREAGSTCSLE*KTNAVV Trigger: GACCACCGCATTGGTTTTCCATTCCAATGAGCACGT...GCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CCA 90 bp | CACTCCCTTGCTGCTGATTATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGGTAGCCAAGCACATCTaGAGACTTACAGAGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: HSLAADYLLVRRPFWYAGVAKHI*RLTELC Trigger: GCAGAGCTCTGTAAGTCTCCAGATGTGCTTGGCTAC...CCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CCA 90 bp | GGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTGGCACCGCAGTTACCTGCCATGCTTTTTaGACTCAGTTTTGGATTTTT | + |
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Preference number: 4 (lower is better) Translates to: GLFGTQGEKQGARVGTAVTCHAF*TQFWIF Trigger: AAAAATCCAAAACTGAGTCCAAAAAGCATGGCAGGT...AACTGCGGTGCCAACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CCA 90 bp | GGCGACAGTCACTCCCTTGCTGCTGATTATCTGTTGGTGCGAAGGCCTTTTTGGCGTTCACGTGCTCATTaGAATGGAAAACCAATGCGG | + |
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Preference number: 4 (lower is better) Translates to: GDSHSLAADYLLVRRPFWRSRAH*NGKPMR Trigger: CCGCATTGGTTTTCCATTCCAATGAGCACGTGAACG...CCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTGACTGTCGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CCA 90 bp | GATTATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCTTTTGGATTTTTGCTTaGGCGTGGAGGAGTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DYLLVRRPFWYAGREAGSFWIFA*AWRSES Trigger: AGACTCACTCCTCCACGCCCAAGCAAAAATCCAAAA...GCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR TCA 90 bp | TGTCTACAAAGACAGCCTGCCGTATGGAACACTGGCATCTCGATACAAATTCTTCCCGCTCTGGTGTCGTaGGTATGCATCTGCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CLQRQPAVWNTGISIQILPALVS*VCICQS Trigger: ACTCTGGCAGATGCATACTCACGACACCAGAGCGGG...AAGAATTTGTATCGAGATGCCAGTGTTCCATACGGCAGGCTGTCTTTGTAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR GCA 90 bp | TGTCTACAAAGACAGCCTGCCGTATGGAACACTGGCATCTCGATACAAATTCTTTACGATAGGCCACCCTaGAGGACACAGCCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CLQRQPAVWNTGISIQILYDRPP*RTQPWP Trigger: AGGCCAAGGCTGTGTCCTGCAGGGTGGCCTATCGTA...AAGAATTTGTATCGAGATGCCAGTGTTCCATACGGCAGGCTGTCTTTGTAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR GCA 90 bp | CACTCCCTTGCTGCTGATTATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGGGAATGGAAAACCAATaGGGTGGTCTTGTGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSLAADYLLVRRPFWYAGGMENQ*GGLVNP Trigger: AGGATTCACAAGACCACCGCATTGGTTTTCCATTCC...CCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR TCA 90 bp | TGTCTACAAAGACAGCCTGCCGTATGGAACACTGGCATCTCGATACAAATTCTTCCTTTCTCCAGCTCCTaGATAACTCCCAGCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: CLQRQPAVWNTGISIQILPFSSS*ITPSST Trigger: AGTGCTGCTGGGAGTTATTCAGGAGCTGGAGAAAGG...AAGAATTTGTATCGAGATGCCAGTGTTCCATACGGCAGGCTGTCTTTGTAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR GCA 90 bp | GGCGACAGTCACTCCCTTGCTGCTGATTATCTGTTGGTGCGAAGGCCTTTTTGGACTATAGATAATACATaGACTGTTCCTGCACGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GDSHSLAADYLLVRRPFWTIDNT*TVPARV Trigger: GACACGTGCAGGAACAGTGCATGTATTATCTATAGT...CCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTGACTGTCGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR GCA 90 bp | GATTATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCAGTTTGTCTTCTTGTTaGTTAAAATCCAGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: DYLLVRRPFWYAGREAGSSLSSC*LKSSST Trigger: TGTGGAGCTGGATTTTAAGCAACAAGAAGACAAACT...GCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR TCA 90 bp | TGTCTACAAAGACAGCCTGCCGTATGGAACACTGGCATCTCGATACAAATTCTTTCTACCACCTCTGTGTaGGGCACAATTTGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLQRQPAVWNTGISIQILSTTSV*GTICWC Trigger: ACACCAACAAATTGTGCCTCACACAGAGGTGGTAGA...AAGAATTTGTATCGAGATGCCAGTGTTCCATACGGCAGGCTGTCTTTGTAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CCA 90 bp | TGTCTACAAAGACAGCCTGCCGTATGGAACACTGGCATCTCGATACAAATTCTTGGAAAACCAATGCGGTaGTCTTGTGAATCCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLQRQPAVWNTGISIQILGKPMR*SCESFL Trigger: CAGGAAGGATTCACAAGACCACCGCATTGGTTTTCC...AAGAATTTGTATCGAGATGCCAGTGTTCCATACGGCAGGCTGTCTTTGTAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CAA 90 bp | GGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTGGCACCGCAGTTGGTACTGCACCGGGGTaGAGCAGGCCACAGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLFGTQGEKQGARVGTAVGTAPG*SRPQQS Trigger: GCTCTGCTGTGGCCTGCTCAACCCCGGTGCAGTACC...AACTGCGGTGCCAACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CAA 90 bp | ATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGCAGCCGGCAGGCCTTaGAGACTGCCTTTCTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ICWCEGLFGTQGEKQGARAAGRP*RLPFLR Trigger: CCGCAAGAAAGGCAGTCTCAAAGGCCTGCCGGCTGC...GCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CAA 90 bp | CGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTGGCACCGCCGCACCTGCAGAGCTTaGTTTCGCTTTTTGATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RRPFWYAGREAGSTRWHRRTCRA*FRFLIC Trigger: GCAGATCAAAAAGCGAAACAAAGCTCTGCAGGTGCG...GCGGTGCCAACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS TCA 90 bp | GCTTGGGCGTGGAGGAGTGAGTCTCCTGAGGGTAAGGCGAAGGGATaGCCTGAGTTTCCTCGACAGGGTGCAGTTTTCTCAGCACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AWAWRSESPEGKAKG*PEFPRQGAVFSAQA Trigger: AGCCTGTGCTGAGAAAACTGCACCCTGTCGAGGAAACTCAGGTCATCCCTTCGCCTTACCCTCAGGAGACTCACTCCTCCACGCCCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CCA 90 bp | GCACTGTCATATACTTACGATAGGCCACCCTGCAGGACACAGCCTTaGCCTCTCGCTTCTCCCCCAGAGGTCCCGAAGACAGCTGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ALSYTYDRPPCRTQP*PLASPPEVPKTAVC Trigger: ACACACAGCTGTCTTCGGGACCTCTGGGGGAGAAGCGAGAGGCCAAGGCTGTGTCCTGCAGGGTGGCCTATCGTAAGTATATGACAGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CAA 90 bp | AGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTGGCACCGCAGTGCTTTGTTTCGCTTTTaGATCTGCCGGTTAGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RPFWYAGREAGSTRWHRSALFRF*ICRLGS Trigger: CGACCCTAACCGGCAGATCAAAAAGCGAAACAAAGC...ACTGCGGTGCCAACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CAA 90 bp | GATTATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACCTGCAGCTGGGCCTaGAGGTCTACCACCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: DYLLVRRPFWYAGREAGSTCSWA*RSTTSV Trigger: CACAGAGGTGGTAGACCTCAAGGCCCAGCTGCAGGT...GCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS GCA 90 bp | GGTCTGCACACCGGTGCTCTTGGTGACATTGGGAATGGATCGGCGTaGAGGCACTGTCATATACTTACGATAGGCCACCCTGCAGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: GLHTGALGDIGNGSA*RHCHILTIGHPAGH Trigger: GTGTCCTGCAGGGTGGCCTATCGTAAGTATATGACAGTGCCTGCACGCCGATCCATTCCCAATGTCACCAAGAGCACCGGTGTGCAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS GCA 90 bp | TGGAATGGAAAACCAATGCGGTGGTCTTGTGAATCCTTCCTGCACTaGAAGGCCGAGGCTCCTCCATGGGTCCCGCCTCGCTCTTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WNGKPMRWSCESFLH*KAEAPPWVPPRSSL Trigger: AAGAGAAGAGCGAGGCGGGACCCATGGAGGAGCCTCGGCCTTGCAGTGCAGGAAGGATTCACAAGACCACCGCATTGGTTTTCCATTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CAA 90 bp | CGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTGGCACCGCTCTGCTAGAAACCCATaGTTCTGGCTTTTGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRPFWYAGREAGSTRWHRSARNP*FWLLKA Trigger: TGCCTTCAAAAGCCAGAACAATGGGTTTCTAGCAGA...GCGGTGCCAACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CAA 90 bp | CACTCCCTTGCTGCTGATTATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCAGAGCTCTGCACAGTaGACCCCAGAAGGCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HSLAADYLLVRRPFWYAGQSSAQ*TPEGCP Trigger: GGGACAGCCTTCTGGGGTCAACTGTGCAGAGCTCTG...CCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CAA 90 bp | GGCGACAGTCACTCCCTTGCTGCTGATTATCTGTTGGTGCGAAGGCCTTTTTGGTGGCAGCAGCAGAGTTaGACAAGCCAGGCTCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GDSHSLAADYLLVRRPFWWQQQS*TSQAQG Trigger: CCCCTGAGCCTGGCTTGTCAAACTCTGCTGCTGCCA...CCAAAAAGGCCTTCGCACCAACAGATAATCAGCAGCAAGGGAGTGACTGTCGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS TCA 90 bp | CTTGCGGTCCAGCGGGAATGTCTGGTAACACTTGCGAAGATCTGGTaGGGTCTGCACACCGGTGCTCTTGGTGACATTGGGAATGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: LAVQRECLVTLAKIW*GLHTGALGDIGNGS Trigger: CGATCCATTCCCAATGTCACCAAGAGCACCGGTGTGCAGACCTCACCAGATCTTCGCAAGTGTTACCAGACATTCCCGCTGGACCGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CCA 90 bp | GTCCCAGTGCGTTCACGTGCTCATTGGAATGGAAAACCAATGCGGTaGTCTTGTGAATCCTTCCTGCACTGCAAGGCCGAGGCTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VPVRSRAHWNGKPMR*SCESFLHCKAEAPP Trigger: TGGAGGAGCCTCGGCCTTGCAGTGCAGGAAGGATTCACAAGACCACCGCATTGGTTTTCCATTCCAATGAGCACGTGAACGCACTGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CAA 90 bp | GATTATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCGGGAGGCCGAGAGTTTaGCAAAACAGCCTCTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: DYLLVRRPFWYAGREAGSGRPRV*QNSLWV Trigger: TACCCAGAGGCTGTTTTGCAAAACTCTCGGCCTCCC...GCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CAA 90 bp | TGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTCTCAGTTTTGGATTTTaGCTTGGGCGTGGAGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CWCEGLFGTQGEKQGARVLSFGF*LGRGGV Trigger: CACTCCTCCACGCCCAAGCAAAAATCCAAAACTGAG...AACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CCA 90 bp | TGGTCTTGTGAATCCTTCCTGCACTGCAAGGCCGAGGCTCCTCCATaGGTCCCGCCTCGCTCTTCTCTTTTGAATCTGCTAGAAACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: WSCESFLHCKAEAPP*VPPRSSLLNLLETH Trigger: ATGGGTTTCTAGCAGATTCAAAAGAGAAGAGCGAGGCGGGACCCATGGAGGAGCCTCGGCCTTGCAGTGCAGGAAGGATTCACAAGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CCA 90 bp | GATGGGCTCCTCAGAGGGAGGCCGAGAGTTTTGCAAAACAGCCTCTaGGTAGCCAAGCACATCTGGAGACTTACAGAGCTCTGCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: DGLLRGRPRVLQNSL*VAKHIWRLTELCTV Trigger: AACTGTGCAGAGCTCTGTAAGTCTCCAGATGTGCTTGGCTACCCAGAGGCTGTTTTGCAAAACTCTCGGCCTCCCTCTGAGGAGCCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CAA 90 bp | ATTATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACCATTGTTCTGGCTTTaGAAGGCATCTGCAGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: IICWCEGLFGTQGEKQGAPLFWL*KASAAG Trigger: GCCGGCTGCAGATGCCTTCAAAAGCCAGAACAATGG...TGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS TCA 90 bp | CGATATGAAAGCCCTTCCCGATGGGCTTCTCCTTTCTCCAGCTCCTaGATAACTCCCAGCAGCACTTTGATGGTCTCCTGGCTAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RYESPSRWASPFSSS*ITPSSTLMVSWLEL Trigger: CAGCTCTAGCCAGGAGACCATCAAAGTGCTGCTGGGAGTTATTCAGGAGCTGGAGAAAGGAGAAGCCCATCGGGAAGGGCTTTCATATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CAA 90 bp | TGTCTACAAAGACAGCCTGCCGTATGGAACACTGGCATCTCGATACAAATTCTTCTGCAGGACACAGCCTaGGCCTCTCGCTTCTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: CLQRQPAVWNTGISIQILLQDTA*ASRFSP Trigger: GGGGGAGAAGCGAGAGGCCAAGGCTGTGTCCTGCAG...AAGAATTTGTATCGAGATGCCAGTGTTCCATACGGCAGGCTGTCTTTGTAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS TCA 90 bp | AACACTTGCGAAGATCTGGTGAGGTCTGCACACCGGTGCTCTTGGTaGCATTGGGAATGGATCGGCGTGCAGGCACTGTCATATACTTAC | + |
|
Preference number: 5 (lower is better) Translates to: NTCEDLVRSAHRCSW*HWEWIGVQALSYTY Trigger: GTAAGTATATGACAGTGCCTGCACGCCGATCCATTCCCAATGTCACCAAGAGCACCGGTGTGCAGACCTCACCAGATCTTCGCAAGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS GCA 90 bp | AGACTTACAGAGCTCTGCACAGTTGACCCCAGAAGGCTGTCCCAGTaGGTTCACGTGCTCATTGGAATGGAAAACCAATGCGGTGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RLTELCTVDPRRLSQ*VHVLIGMENQCGGL Trigger: AAGACCACCGCATTGGTTTTCCATTCCAATGAGCACGTGAACGCACTGGGACAGCCTTCTGGGGTCAACTGTGCAGAGCTCTGTAAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CCA 90 bp | TCCCCCAGAGGTCCCGAAGACAGCTGTGTGTCTCTCTGCTCATTCTaGGCCTCACAGATATCCTTAAAACGCACCTGCAGAGCTTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SPRGPEDSCVSLCSF*ASQISLKRTCRALF Trigger: AAACAAAGCTCTGCAGGTGCGTTTTAAGGATATCTGTGAGGCCCAGAATGAGCAGAGAGACACACAGCTGTCTTCGGGACCTCTGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CAA 90 bp | TGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCACGCGTTCACCTGCCATGCTTTTaGGACTCAGTTTTGGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: CWCEGLFGTQGEKQGARVHLPCF*DSVLDF Trigger: AAAATCCAAAACTGAGTCCAAAAAGCATGGCAGGTG...AACGCGTGCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS GCA 90 bp | ATATCCTTAAAACGCACCTGCAGAGCTTTGTTTCGCTTTTTGATCTaGCGGTTAGGGTCGAGGGCATATCTCATCTCCAGGGCCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ISLKRTCRALFRFLI*RLGSRAYLISRARQ Trigger: CTGCCTGGCCCTGGAGATGAGATATGCCCTCGACCCTAACCGGCAGATCAAAAAGCGAAACAAAGCTCTGCAGGTGCGTTTTAAGGATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CAA 90 bp | GATTATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCCCTCGCTCTTCTCTTTaGAATCTGCTAGAAACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: DYLLVRRPFWYAGREAGSPRSSL*NLLETH Trigger: ATGGGTTTCTAGCAGATTCAAAAGAGAAGAGCGAGG...GCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS GCA 90 bp | TCTCTCTGCTCATTCTGGGCCTCACAGATATCCTTAAAACGCACCTaGAGAGCTTTGTTTCGCTTTTTGATCTGCCGGTTAGGGTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLCSFWASQISLKRT*RALFRFLICRLGSR Trigger: CCTCGACCCTAACCGGCAGATCAAAAAGCGAAACAAAGCTCTGCAGGTGCGTTTTAAGGATATCTGTGAGGCCCAGAATGAGCAGAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CAA 90 bp | GATTATCTGTTGGTGCGAAGGCCTTTTTGGTACGCAGGGCGAGAAGCAGGGAGCCAGTTTGTCTTCTTGTaGCTTAAAATCCAGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: DYLLVRRPFWYAGREAGSQFVFL*LKIQLH Trigger: GTGGAGCTGGATTTTAAGCAACAAGAAGACAAACTG...GCTCCCTGCTTCTCGCCCTGCGTACCAAAAAGGCCTTCGCACCAACAGATAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS-3UTR CAA 90 bp | TGTCTACAAAGACAGCCTGCCGTATGGAACACTGGCATCTCGATACAAATTCTTGTGCTCTTGGTGACATaGGGAATGGATCGGCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CLQRQPAVWNTGISIQILVLLVT*GMDRRA Trigger: TGCACGCCGATCCATTCCCAATGTCACCAAGAGCAC...AAGAATTTGTATCGAGATGCCAGTGTTCCATACGGCAGGCTGTCTTTGTAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CCA 72 bp | ACAGCAGAGCCTGTGGATGCCTGTAGCCCATTGAGGTaGGCGGCTCGCCTCTGCTCCTCATCTGCAGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TAEPVDACSPLR*AARLCSSSAGQ Trigger: CTGCCCTGCAGATGAGGAGCAGAGGCGAGCCGCCCACCTCAATGGGCTACAGGCATCCACAGGCTCTGCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS TCA 72 bp | AAACACCCTTCCGTGGGTGAGTGGAGCCGGCTCCTCTaGGTCCAGGGTGCCCCTGTCAAGCTTAGCTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: KHPSVGEWSRLL*VQGAPVKLSSP Trigger: GGGAGAGCTAAGCTTGACAGGGGCACCCTGGACTCAGAGGAGCCGGCTCCACTCACCCACGGAAGGGTGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS TCA 72 bp | CAGAGTTTGACAAGCCAGGCTCAGGGGCCCTGGTACTaGTGGCAGGCGGATACACAGTGGCGACCTCGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: QSLTSQAQGPWY*WQADTQWRPRF Trigger: AAACCGAGGTCGCCACTGTGTATCCGCCTGCCATCAGTACCAGGGCCCCTGAGCCTGGCTTGTCAAACTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CCA 72 bp | TACACAGTGGCGACCTCGGTTTTAAACACCCTTCCGTaGGTGAGTGGAGCCGGCTCCTCTGAGTCCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: YTVATSVLNTLP*VSGAGSSESRV Trigger: CACCCTGGACTCAGAGGAGCCGGCTCCACTCACCCACGGAAGGGTGTTTAAAACCGAGGTCGCCACTGTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
||
| CDS CAA 90 bp | CCCCTGCAGCTGGTGGATGGGCTCCTCAGAGGGAGGCCGAGAGTTTaGCAAAACAGCCTCTGGGTAGCCAAGCACATCTGGAGACTTACA | + |
|
Preference number: 6 (lower is better) Translates to: PLQLVDGLLRGRPRV*QNSLWVAKHIWRLT Trigger: TGTAAGTCTCCAGATGTGCTTGGCTACCCAGAGGCTGTTTTGCAAAACTCTCGGCCTCCCTCTGAGGAGCCCATCCACCAGCTGCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CCA 72 bp | TATACTTACGATAGGCCACCCTGCAGGACACAGCCTTaGCCTCTCGCTTCTCCCCCAGAGGTCCCGAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: YTYDRPPCRTQP*PLASPPEVPKT Trigger: TGTCTTCGGGACCTCTGGGGGAGAAGCGAGAGGCCAAGGCTGTGTCCTGCAGGGTGGCCTATCGTAAGTATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
||
| CDS CAA 72 bp | CTGGTGGATGGGCTCCTCAGAGGGAGGCCGAGAGTTTaGCAAAACAGCCTCTGGGTAGCCAAGCACATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LVDGLLRGRPRV*QNSLWVAKHIW Trigger: CCAGATGTGCTTGGCTACCCAGAGGCTGTTTTGCAAAACTCTCGGCCTCCCTCTGAGGAGCCCATCCACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS TCA 72 bp | GAAGATCTGGTGAGGTCTGCACACCGGTGCTCTTGGTaGCATTGGGAATGGATCGGCGTGCAGGCACTGTCA | + |
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Preference number: 6 (lower is better) Translates to: EDLVRSAHRCSW*HWEWIGVQALS Trigger: TGACAGTGCCTGCACGCCGATCCATTCCCAATGTCACCAAGAGCACCGGTGTGCAGACCTCACCAGATCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CAA 72 bp | TTCTGGCTTTTGAAGGCATCTGCAGCCGGCAGGCCTTaGAGACTGCCTTTCTTGCGGTCCAGCGGGAATGTC | + |
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Preference number: 6 (lower is better) Translates to: FWLLKASAAGRP*RLPFLRSSGNV Trigger: GACATTCCCGCTGGACCGCAAGAAAGGCAGTCTCAAAGGCCTGCCGGCTGCAGATGCCTTCAAAAGCCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS TCA 72 bp | CAGCGGGAATGTCTGGTAACACTTGCGAAGATCTGGTaGGGTCTGCACACCGGTGCTCTTGGTGACATTGGG | + |
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Preference number: 6 (lower is better) Translates to: QRECLVTLAKIW*GLHTGALGDIG Trigger: CCCAATGTCACCAAGAGCACCGGTGTGCAGACCTCACCAGATCTTCGCAAGTGTTACCAGACATTCCCGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS GCA 72 bp | CTTTCTTGCGGTCCAGCGGGAATGTCTGGTAACACTTaGGAAGATCTGGTGAGGTCTGCACACCGGTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LSCGPAGMSGNT*EDLVRSAHRCS Trigger: AGAGCACCGGTGTGCAGACCTCACCAGATCTTCGCAAGTGTTACCAGACATTCCCGCTGGACCGCAAGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS GCA 72 bp | GCACTGTTCCTGCACGTGTCACAATTAGCTGTGTCTTaGCCCGTCCGATATGAAAGCCCTTCCCGATGGGCT | + |
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Preference number: 6 (lower is better) Translates to: ALFLHVSQLAVS*PVRYESPSRWA Trigger: AGCCCATCGGGAAGGGCTTTCATATCGGACGGGGCAAGACACAGCTAATTGTGACACGTGCAGGAACAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CAA 72 bp | TCTGGTGAGGTCTGCACACCGGTGCTCTTGGTGACATaGGGAATGGATCGGCGTGCAGGCACTGTCATATAC | + |
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Preference number: 6 (lower is better) Translates to: SGEVCTPVLLVT*GMDRRAGTVIY Trigger: GTATATGACAGTGCCTGCACGCCGATCCATTCCCAATGTCACCAAGAGCACCGGTGTGCAGACCTCACCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS TCA 72 bp | TGGAGGAGTGAGTCTCCTGAGGGTAAGGCGAAGGGATaGCCTGAGTTTCCTCGACAGGGTGCAGTTTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: WRSESPEGKAKG*PEFPRQGAVFS Trigger: TGAGAAAACTGCACCCTGTCGAGGAAACTCAGGTCATCCCTTCGCCTTACCCTCAGGAGACTCACTCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS GCA 72 bp | ACCGGTGCTCTTGGTGACATTGGGAATGGATCGGCGTaGAGGCACTGTCATATACTTACGATAGGCCACCCT | + |
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Preference number: 6 (lower is better) Translates to: TGALGDIGNGSA*RHCHILTIGHP Trigger: AGGGTGGCCTATCGTAAGTATATGACAGTGCCTGCACGCCGATCCATTCCCAATGTCACCAAGAGCACCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS GCA 72 bp | GAGCTCTGCACAGTTGACCCCAGAAGGCTGTCCCAGTaGGTTCACGTGCTCATTGGAATGGAAAACCAATGC | + |
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Preference number: 6 (lower is better) Translates to: ELCTVDPRRLSQ*VHVLIGMENQC Trigger: GCATTGGTTTTCCATTCCAATGAGCACGTGAACGCACTGGGACAGCCTTCTGGGGTCAACTGTGCAGAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CCA 72 bp | CTCAGAGGGAGGCCGAGAGTTTTGCAAAACAGCCTCTaGGTAGCCAAGCACATCTGGAGACTTACAGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LRGRPRVLQNSL*VAKHIWRLTEL Trigger: GAGCTCTGTAAGTCTCCAGATGTGCTTGGCTACCCAGAGGCTGTTTTGCAAAACTCTCGGCCTCCCTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS TCA 72 bp | ACCTGCAGCTGGGCCTTGAGGTCTACCACCTCTGTGTaGGGCACAATTTGTTGGTGTTCTTCATCCCCTATC | + |
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Preference number: 6 (lower is better) Translates to: TCSWALRSTTSV*GTICWCSSSPI Trigger: GATAGGGGATGAAGAACACCAACAAATTGTGCCTCACACAGAGGTGGTAGACCTCAAGGCCCAGCTGCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CCA 72 bp | GGTCCCGAAGACAGCTGTGTGTCTCTCTGCTCATTCTaGGCCTCACAGATATCCTTAAAACGCACCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GPEDSCVSLCSF*ASQISLKRTCR Trigger: TCTGCAGGTGCGTTTTAAGGATATCTGTGAGGCCCAGAATGAGCAGAGAGACACACAGCTGTCTTCGGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CCA 72 bp | CGTTCACGTGCTCATTGGAATGGAAAACCAATGCGGTaGTCTTGTGAATCCTTCCTGCACTGCAAGGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: RSRAHWNGKPMR*SCESFLHCKAE Trigger: CTCGGCCTTGCAGTGCAGGAAGGATTCACAAGACCACCGCATTGGTTTTCCATTCCAATGAGCACGTGAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CAA 72 bp | CTTGAGGTCTACCACCTCTGTGTGAGGCACAATTTGTaGGTGTTCTTCATCCCCTATCCCAGCTGTGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LEVYHLCVRHNL*VFFIPYPSCGA Trigger: AGCCCCACAGCTGGGATAGGGGATGAAGAACACCAACAAATTGTGCCTCACACAGAGGTGGTAGACCTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CAA 90 bp | ATGGGTCCCGCCTCGCTCTTCTCTTTTGAATCTGCTAGAAACCCATaGTTCTGGCTTTTGAAGGCATCTGCAGCCGGCAGGCCTTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: MGPASLFSFESARNP*FWLLKASAAGRPLR Trigger: TCTCAAAGGCCTGCCGGCTGCAGATGCCTTCAAAAGCCAGAACAATGGGTTTCTAGCAGATTCAAAAGAGAAGAGCGAGGCGGGACCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS GCA 72 bp | AAACGCACCTGCAGAGCTTTGTTTCGCTTTTTGATCTaGCGGTTAGGGTCGAGGGCATATCTCATCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: KRTCRALFRFLI*RLGSRAYLISR Trigger: CCTGGAGATGAGATATGCCCTCGACCCTAACCGGCAGATCAAAAAGCGAAACAAAGCTCTGCAGGTGCGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CAA 72 bp | GCCTCACAGATATCCTTAAAACGCACCTGCAGAGCTTaGTTTCGCTTTTTGATCTGCCGGTTAGGGTCGAGG | + |
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Preference number: 6 (lower is better) Translates to: ASQISLKRTCRA*FRFLICRLGSR Trigger: CCTCGACCCTAACCGGCAGATCAAAAAGCGAAACAAAGCTCTGCAGGTGCGTTTTAAGGATATCTGTGAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CCA 72 bp | CTCTTCTCTTTTGAATCTGCTAGAAACCCATTGTTCTaGCTTTTGAAGGCATCTGCAGCCGGCAGGCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LFSFESARNPLF*LLKASAAGRPL Trigger: CAAAGGCCTGCCGGCTGCAGATGCCTTCAAAAGCCAGAACAATGGGTTTCTAGCAGATTCAAAAGAGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CAA 72 bp | TCGACAGGGTGCAGTTTTCTCAGCACAGGCTGCAGTTaGTCTTCTTGTTGCTTAAAATCCAGCTCCACACTA | + |
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Preference number: 6 (lower is better) Translates to: STGCSFLSTGCS*SSCCLKSSSTL Trigger: TAGTGTGGAGCTGGATTTTAAGCAACAAGAAGACAAACTGCAGCCTGTGCTGAGAAAACTGCACCCTGTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS GCA 72 bp | TCATTCTGGGCCTCACAGATATCCTTAAAACGCACCTaGAGAGCTTTGTTTCGCTTTTTGATCTGCCGGTTA | + |
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Preference number: 6 (lower is better) Translates to: SFWASQISLKRT*RALFRFLICRL Trigger: TAACCGGCAGATCAAAAAGCGAAACAAAGCTCTGCAGGTGCGTTTTAAGGATATCTGTGAGGCCCAGAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CAA 90 bp | CTCGACAGGGTGCAGTTTTCTCAGCACAGGCTGCAGTTTGTCTTCTaGTTGCTTAAAATCCAGCTCCACACTATAGATAATACATGCACT | + |
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Preference number: 6 (lower is better) Translates to: LDRVQFSQHRLQFVF*LLKIQLHTIDNTCT Trigger: AGTGCATGTATTATCTATAGTGTGGAGCTGGATTTTAAGCAACAAGAAGACAAACTGCAGCCTGTGCTGAGAAAACTGCACCCTGTCGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CAA 90 bp | GACAGGGTGCAGTTTTCTCAGCACAGGCTGCAGTTTGTCTTCTTGTaGCTTAAAATCCAGCTCCACACTATAGATAATACATGCACTGTT | + |
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Preference number: 6 (lower is better) Translates to: DRVQFSQHRLQFVFL*LKIQLHTIDNTCTV Trigger: AACAGTGCATGTATTATCTATAGTGTGGAGCTGGATTTTAAGCAACAAGAAGACAAACTGCAGCCTGTGCTGAGAAAACTGCACCCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS GCA 72 bp | TTGCTTAAAATCCAGCTCCACACTATAGATAATACATaGACTGTTCCTGCACGTGTCACAATTAGCTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: LLKIQLHTIDNT*TVPARVTISCV Trigger: GACACAGCTAATTGTGACACGTGCAGGAACAGTGCATGTATTATCTATAGTGTGGAGCTGGATTTTAAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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| CDS CAA 72 bp | CAGTTTTCTCAGCACAGGCTGCAGTTTGTCTTCTTGTaGCTTAAAATCCAGCTCCACACTATAGATAATACA | + |
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Preference number: 6 (lower is better) Translates to: QFSQHRLQFVFL*LKIQLHTIDNT Trigger: TGTATTATCTATAGTGTGGAGCTGGATTTTAAGCAACAAGAAGACAAACTGCAGCCTGTGCTGAGAAAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171394.3 |
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