Pregenerated sensors for INSM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068154Ensembl transcript IDs: ENSMUST00000089257.6
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGGTTGGGGTCCAAAGGAGTCACAGCGAGAAGACCAGGTGGTCATaGTCCACCGAAGCGAAGCGAAGAGGACACTTTCACCCTGGAATG | + |
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Preference number: 1 (lower is better) Translates to: GVGVQRSHSEKTRWS*STEAKRRGHFHPGM Trigger: CATTCCAGGGTGAAAGTGTCCTCTTCGCTTCGCTTCGGTGGAGCATGACCACCTGGTCTTCTCGCTGTGACTCCTTTGGACCCCAACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| 3UTR TCA 90 bp | AGCCATAATAAAGCTAATCGTGTGGGAAGTTCAATTTACAGCCTGTaGAATATAAAGGCATTTTATTCCTCAAGATTCACCCAAAACAAC | + |
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Preference number: 1 (lower is better) Translates to: SHNKANRVGSSIYSL*NIKAFYSSRFTQNN Trigger: GTTGTTTTGGGTGAATCTTGAGGAATAAAATGCCTTTATATTTCACAGGCTGTAAATTGAACTTCCCACACGATTAGCTTTATTATGGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| 3UTR-3UTR CCA 90 bp | ACAATCCCCAACAGACAACAGGTCAAGGCATTTGTGGCTATACTAAAGAAAACTGTGAAGGCACAGTTCTaGGGGCCCCCGGACCGAGGG | + |
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Preference number: 2 (lower is better) Translates to: TIPNRQQVKAFVAILKKTVKAQF*GPPDRG Trigger: CCCTCGGTCCGGGGGCCCCCAGAACTGTGCCTTCAC...AGTTTTCTTTAGTATAGCCACAAATGCCTTGACCTGTTGTCTGTTGGGGATTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| 3UTR-3UTR TCA 90 bp | TTTTATTCCTCAAGATTCACCCAAAACAACCCGTACGCTACAGACATAGAGAGCTTGTGGGTCTCCGAGTaGAGGCACAGTTCTGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: FYSSRFTQNNPYATDIESLWVSE*RHSSGG Trigger: GCCCCCAGAACTGTGCCTTCACTCGGAGACCCACAA...GCTCTCTATGTCTGTAGCGTACGGGTTGTTTTGGGTGAATCTTGAGGAATAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| 3UTR-3UTR CCA 90 bp | GAGATTGGTAGGCAGAGCAAACCGCATTTTCTAGACCATGAACACAGCGAATACAGGACACTTTCACCCTaGAATGGGAGTAGGGGACCC | + |
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Preference number: 2 (lower is better) Translates to: EIGRQSKPHFLDHEHSEYRTLSP*NGSRGP Trigger: GGGTCCCCTACTCCCATTCCAGGGTGAAAGTGTCCT...GTATTCGCTGTGTTCATGGTCTAGAAAATGCGGTTTGCTCTGCCTACCAATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCAGTTCACAAGCCATAATAAAGCTAATCGTGTGGGAAGTTCAATTTACACCCCCAGATCAGGCATaGGGGGCGCTCTCTCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: SSSSQAIIKLIVWEVQFTPPDQA*GALSLC Trigger: ACAAAGAGAGAGCGCCCCCCATGCCTGATCTGGGGG...TGTAAATTGAACTTCCCACACGATTAGCTTTATTATGGCTTGTGAACTGCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| 3UTR-3UTR GCA 90 bp | GAGATTGGTAGGCAGAGCAAACCGCATTTTCTAGACCATGAACACAGCGAATACCAAGAAAAACAGCTTTaGCCCTCAAAAGGAGGCGTC | + |
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Preference number: 2 (lower is better) Translates to: EIGRQSKPHFLDHEHSEYQEKQL*PSKGGV Trigger: GACGCCTCCTTTTGAGGGGCAAAGCTGTTTTTCTTG...GTATTCGCTGTGTTCATGGTCTAGAAAATGCGGTTTGCTCTGCCTACCAATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| 3UTR-3UTR TCA 90 bp | TCCAGCAGTTCACAAGCCATAATAAAGCTAATCGTGTGGGAAGTTCAATTTACAGCATTTTCTAGACCATaGACACAGCGAATACTAGCA | + |
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Preference number: 2 (lower is better) Translates to: SSSSQAIIKLIVWEVQFTAFSRP*TQRILA Trigger: TGCTAGTATTCGCTGTGTTCATGGTCTAGAAAATGC...TGTAAATTGAACTTCCCACACGATTAGCTTTATTATGGCTTGTGAACTGCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| 3UTR CCA 72 bp | CTCCACCGAAGCGAAGCGAAGAGGACACTTTCACCCTaGAATGGGAGTAGGGGACCCCCAGATCAGGCATGG | + |
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Preference number: 3 (lower is better) Translates to: LHRSEAKRTLSP*NGSRGPPDQAW Trigger: CCATGCCTGATCTGGGGGTCCCCTACTCCCATTCCAGGGTGAAAGTGTCCTCTTCGCTTCGCTTCGGTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| 3UTR-3UTR CAA 90 bp | AAGGTAAAGCCAGACTCCAGCAGTTCACAAGCCATAATAAAGCTAATCGTGTGGAGAGACGGACTCCTGTaGCGCCATGGGGCTTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: KVKPDSSSSQAIIKLIVWRDGLL*RHGAWG Trigger: CCCCCAAGCCCCATGGCGCAACAGGAGTCCGTCTCT...CCACACGATTAGCTTTATTATGGCTTGTGAACTGCTGGAGTCTGGCTTTACCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| 3UTR-3UTR CAA 90 bp | AAAACAATCCCCAACAGACAACAGGTCAAGGCATTTGTGGCTATACTAAAGAAACATAGAGAGCAGAGATaGGTAGGCAGAGCAAACCGC | + |
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Preference number: 3 (lower is better) Translates to: KTIPNRQQVKAFVAILKKHREQR*VGRANR Trigger: GCGGTTTGCTCTGCCTACCAATCTCTGCTCTCTATG...TTTCTTTAGTATAGCCACAAATGCCTTGACCTGTTGTCTGTTGGGGATTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR GCA 90 bp | GCGCTCTCTCTTTGTGGGTCTCCGAGTGAAGGCACAGTTCTGGGGGCCCCCGGATACTTGTGCTTCTCGTaGTCGCGGCTCACCGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: ALSLCGSPSEGTVLGAPGYLCFS*SRLTGR Trigger: GCGGCCGGTGAGCCGCGAGCACGAGAAGCACAAGTA...TCCGGGGGCCCCCAGAACTGTGCCTTCACTCGGAGACCCACAAAGAGAGAGCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR GCA 90 bp | GCGCTCTCTCTTTGTGGGTCTCCGAGTGAAGGCACAGTTCTGGGGGCCCCCGGAGCGTGGACTTCTTGCTaGGCTTCACCAGAAACCCGC | + |
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Preference number: 4 (lower is better) Translates to: ALSLCGSPSEGTVLGAPGAWTSC*ASPETR Trigger: GCGGGTTTCTGGTGAAGCGCAGCAAGAAGTCCACGC...TCCGGGGGCCCCCAGAACTGTGCCTTCACTCGGAGACCCACAAAGAGAGAGCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGTGGCAGGGGGAAAGCTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCCTCCGCCCTGGTaGCGGCTTCTGGCTCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: VKSGRGKAQRERERERERAPPPW*RLLALA Trigger: CGCCAGAGCCAGAAGCCGCCACCAGGGCGGAGGCGC...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAGCTTTCCCCCTGCCACTTTTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CCA 90 bp | ATGCTCCACCGAAGCGAAGCGAAGAGGACACTTTCACCCTGGAATGGGAGTAGGCACACTGGGCACAGGTaGCACTGGGCGGTCGCACTC | + |
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Preference number: 4 (lower is better) Translates to: MLHRSEAKRTLSPWNGSRHTGHR*HWAVAL Trigger: GAGTGCGACCGCCCAGTGCCACCTGTGCCCAGTGTG...CCTACTCCCATTCCAGGGTGAAAGTGTCCTCTTCGCTTCGCTTCGGTGGAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CCA 90 bp | ATGCTCCACCGAAGCGAAGCGAAGAGGACACTTTCACCCTGGAATGGGAGTAGGTTGCAGGGGAACACCTaGGCAGCGTGCAGCAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: MLHRSEAKRTLSPWNGSRLQGNT*AACSRR Trigger: GCGCCTGCTGCACGCTGCCCAGGTGTTCCCCTGCAA...CCTACTCCCATTCCAGGGTGAAAGTGTCCTCTTCGCTTCGCTTCGGTGGAGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGTGGCAGGGGGAAAGCTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTCTCCCCGCACACTaGGCACAGGTGGCACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: VKSGRGKAQRERERERERGLPAH*AQVALG Trigger: GCCCAGTGCCACCTGTGCCCAGTGTGCGGGGAGACC...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAGCTTTCCCCCTGCCACTTTTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CCA 90 bp | AAATGTCAAAAGTGGCAGGGGGAAAGCTCAGAGAGAGAGAGAGAGAGAGAGAGAGGCTCACCGGCCGCGTaGGACTGTAGAGAGGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: KCQKWQGESSERERERERGSPAA*DCREAP Trigger: CGGCGCCTCTCTACAGTCCCACGCGGCCGGTGAGCC...TCTCTCTCTCTCTCTCTCTCTCTCTGAGCTTTCCCCCTGCCACTTTTGACATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CCA 90 bp | TCCTCAAGATTCACCCAAAACAACCCGTACGCTACAGACATAGAGAGCAGAGATCGCGCGCCTCCGCCCTaGTGGCGGCTTCTGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SSRFTQNNPYATDIESRDRAPPP*WRLLAL Trigger: CAGAGCCAGAAGCCGCCACCAGGGCGGAGGCGCGCG...ATCTCTGCTCTCTATGTCTGTAGCGTACGGGTTGTTTTGGGTGAATCTTGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR TCA 90 bp | GTCAAAAGTGGCAGGGGGAAAGCTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCGGCGAGCCCAGGTTaGAGCTGCGCTCGAAGTACT | + |
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Preference number: 4 (lower is better) Translates to: VKSGRGKAQRERERERERPASPG*SCARST Trigger: AGTACTTCGAGCGCAGCTTCAACCTGGGCTCGCCGG...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAGCTTTCCCCCTGCCACTTTTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CCA 90 bp | AAGAGATTGCATTTAAAAGTAAGAGCTGTCGGTTGTACAAGGGCCTTGGGGCCCCCTGGGCGCCCTTGCTaGGGAAGGTCTCCCCGCACA | + |
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Preference number: 4 (lower is better) Translates to: KRLHLKVRAVGCTRALGPPGRPC*GRSPRT Trigger: TGTGCGGGGAGACCTTCCCCAGCAAGGGCGCCCAGG...GGGCCCCAAGGCCCTTGTACAACCGACAGCTCTTACTTTTAAATGCAATCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CCA 90 bp | AAGGTAAAGCCAGACTCCAGCAGTTCACAAGCCATAATAAAGCTAATCGTGTGGGCGGGGGCGCGCCTTTaGCCTGCAGCGCCTGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: KVKPDSSSSQAIIKLIVWAGARL*PAAPGD Trigger: ATCACCAGGCGCTGCAGGCCAAAGGCGCGCCCCCGC...CCACACGATTAGCTTTATTATGGCTTGTGAACTGCTGGAGTCTGGCTTTACCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR GCA 90 bp | GCCAGACTCCAGCAGTTCACAAGCCATAATAAAGCTAATCGTGTGGGAAGTTCAATGCGCGAGCACTTGTaGTGCGCCAGCGCGAACGGG | + |
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Preference number: 4 (lower is better) Translates to: ARLQQFTSHNKANRVGSSMREHL*CASANG Trigger: CCCGTTCGCGCTGGCGCAGCACAAGTGCTCGCGCAT...TGAACTTCCCACACGATTAGCTTTATTATGGCTTGTGAACTGCTGGAGTCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR GCA 90 bp | TTTTATTCCTCAAGATTCACCCAAAACAACCCGTACGCTACAGACATAGAGAGCACCGGCCGTGGTTTGTaGCAGCGGCGGTGCGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: FYSSRFTQNNPYATDIESTGRGL*QRRCEA Trigger: GGCCTCGCACCGCCGCTGGCACAAACCACGGCCGGT...GCTCTCTATGTCTGTAGCGTACGGGTTGTTTTGGGTGAATCTTGAGGAATAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR GCA 90 bp | AAGAGATTGCATTTAAAAGTAAGAGCTGTCGGTTGTACAAGGGCCTTGGGGCCCTGGCCGGGCAGTACTTaGAGGGGAACACCTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KRLHLKVRAVGCTRALGPWPGST*RGTPGQ Trigger: CTGCCCAGGTGTTCCCCTGCAAGTACTGCCCGGCCA...GGGCCCCAAGGCCCTTGTACAACCGACAGCTCTTACTTTTAAATGCAATCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGTGGCAGGGGGAAAGCTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTAGGACACGGGCGTaGACTTCTTGCTGCGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VKSGRGKAQRERERERERGRTRA*TSCCAS Trigger: TGAAGCGCAGCAAGAAGTCCACGCCCGTGTCCTACC...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAGCTTTCCCCCTGCCACTTTTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CCA 90 bp | AAGGCATTTTATTCCTCAAGATTCACCCAAAACAACCCGTACGCTACAGACATACGCGGGCACCGGCCGTaGTTTGTGCCAGCGGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: KAFYSSRFTQNNPYATDIRGHRP*FVPAAV Trigger: CACCGCCGCTGGCACAAACCACGGCCGGTGCCCGCG...TATGTCTGTAGCGTACGGGTTGTTTTGGGTGAATCTTGAGGAATAAAATGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR TCA 90 bp | AAGGTAAAGCCAGACTCCAGCAGTTCACAAGCCATAATAAAGCTAATCGTGTGGGGTTGGCCGGGCAGCTaGAGACCTTGGCGCACTCTG | + |
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Preference number: 4 (lower is better) Translates to: KVKPDSSSSQAIIKLIVWGWPGS*RPWRTL Trigger: CAGAGTGCGCCAAGGTCTTCAGCTGCCCGGCCAACC...CCACACGATTAGCTTTATTATGGCTTGTGAACTGCTGGAGTCTGGCTTTACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CCA 90 bp | TCCAGCAGTTCACAAGCCATAATAAAGCTAATCGTGTGGGAAGTTCAATTTACATGGCGCTCGGGGCCTTaGCTGCCTTGGCGGGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: SSSSQAIIKLIVWEVQFTWRSGP*LPWRAA Trigger: AGCCGCCCGCCAAGGCAGCCAAGGCCCCGAGCGCCA...TGTAAATTGAACTTCCCACACGATTAGCTTTATTATGGCTTGTGAACTGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CCA 90 bp | AAGAGATTGCATTTAAAAGTAAGAGCTGTCGGTTGTACAAGGGCCTTGGGGCCCCCAGAACCGGCGACGTaGTCACCTCGTCCTCGAAGT | + |
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Preference number: 4 (lower is better) Translates to: KRLHLKVRAVGCTRALGPPEPAT*SPRPRS Trigger: ACTTCGAGGACGAGGTGACCACGTCGCCGGTTCTGG...GGGCCCCAAGGCCCTTGTACAACCGACAGCTCTTACTTTTAAATGCAATCTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CCA 90 bp | ACAATCCCCAACAGACAACAGGTCAAGGCATTTGTGGCTATACTAAAGAAAACTCGCAGGTGGCGCTCCTaGGCGCCCTTGCTGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: TIPNRQQVKAFVAILKKTRRWRS*APLLGK Trigger: CTTCCCCAGCAAGGGCGCCCAGGAGCGCCACCTGCG...AGTTTTCTTTAGTATAGCCACAAATGCCTTGACCTGTTGTCTGTTGGGGATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CCA 90 bp | AAATGTCAAAAGTGGCAGGGGGAAAGCTCAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGCTGTAGAAGGTaGCCGGGCAGTACTTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KCQKWQGESSERERERERGSCRR*PGSTCR Trigger: CCTGCAAGTACTGCCCGGCCACCTTCTACAGCTCCC...TCTCTCTCTCTCTCTCTCTCTCTCTGAGCTTTCCCCCTGCCACTTTTGACATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR TCA 90 bp | AAAACAATCCCCAACAGACAACAGGTCAAGGCATTTGTGGCTATACTAAAGAAACCCGTCCTCGGAGCCTaGCTCGGATACGCCGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KTIPNRQQVKAFVAILKKPVLGA*LGYAAR Trigger: CCTGGCGGCGTATCCGAGTCAGGCTCCGAGGACGGG...TTTCTTTAGTATAGCCACAAATGCCTTGACCTGTTGTCTGTTGGGGATTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR GCA 90 bp | AAGAGATTGCATTTAAAAGTAAGAGCTGTCGGTTGTACAAGGGCCTTGGGGCCCACCTCGTCCTCGAAGTaGAGCTTGCGGATGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: KRLHLKVRAVGCTRALGPTSSSK*SLRMAF Trigger: GAAGGCCATCCGCAAGCTGCACTTCGAGGACGAGGT...GGGCCCCAAGGCCCTTGTACAACCGACAGCTCTTACTTTTAAATGCAATCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR GCA 90 bp | AAGGTAAAGCCAGACTCCAGCAGTTCACAAGCCATAATAAAGCTAATCGTGTGGGTGCCAGCAGGTGCTTaGGCAGATAGGCCTGGCGAC | + |
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Preference number: 4 (lower is better) Translates to: KVKPDSSSSQAIIKLIVWVPAGA*ADRPGD Trigger: GTCGCCAGGCCTATCTGCGCAAGCACCTGCTGGCAC...CCACACGATTAGCTTTATTATGGCTTGTGAACTGCTGGAGTCTGGCTTTACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CCA 90 bp | AAAACAATCCCCAACAGACAACAGGTCAAGGCATTTGTGGCTATACTAAAGAAAGCAGCGCGGCGGGCGTaGGGAAGGACTCAGCGGACA | + |
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Preference number: 4 (lower is better) Translates to: KTIPNRQQVKAFVAILKKAARRA*GRTQRT Trigger: TGTCCGCTGAGTCCTTCCCCACGCCCGCCGCGCTGC...TTTCTTTAGTATAGCCACAAATGCCTTGACCTGTTGTCTGTTGGGGATTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CCA 90 bp | AAATGTCAAAAGTGGCAGGGGGAAAGCTCAGAGAGAGAGAGAGAGAGAGAGAGAAGTGCAGCTTGCGGATaGCCTTCGGCTTTTTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: KCQKWQGESSERERERERSAACG*PSAFWR Trigger: GCGCCAAAAAGCCGAAGGCCATCCGCAAGCTGCACT...TCTCTCTCTCTCTCTCTCTCTCTCTGAGCTTTCCCCCTGCCACTTTTGACATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CCA 90 bp | AAAACAATCCCCAACAGACAACAGGTCAAGGCATTTGTGGCTATACTAAAGAAAGGGCACAGGTGGCACTaGGCGGTCGCACTCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: KTIPNRQQVKAFVAILKKGHRWH*AVALRP Trigger: GGGCCTGAGTGCGACCGCCCAGTGCCACCTGTGCCC...TTTCTTTAGTATAGCCACAAATGCCTTGACCTGTTGTCTGTTGGGGATTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CCA 90 bp | AAGGTAAAGCCAGACTCCAGCAGTTCACAAGCCATAATAAAGCTAATCGTGTGGGGCGACGGAACTTCTTaGCGCAGTGGTGGCACTCGT | + |
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Preference number: 4 (lower is better) Translates to: KVKPDSSSSQAIIKLIVWGDGTS*RSGGTR Trigger: ACGAGTGCCACCACTGCGCCAAGAAGTTCCGTCGCC...CCACACGATTAGCTTTATTATGGCTTGTGAACTGCTGGAGTCTGGCTTTACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR TCA 90 bp | ACAATCCCCAACAGACAACAGGTCAAGGCATTTGTGGCTATACTAAAGAAAACTACGCAGTGCCCATCTTaGGCTCGGCGGGAGCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TIPNRQQVKAFVAILKKTTQCPS*ARRERR Trigger: TCTTCGCTCCCGCCGAGCTCAAGATGGGCACTGCGT...AGTTTTCTTTAGTATAGCCACAAATGCCTTGACCTGTTGTCTGTTGGGGATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR GCA 90 bp | TCCTCAAGATTCACCCAAAACAACCCGTACGCTACAGACATAGAGAGCAGAGATCCTCGAAGTGCAGCTTaGGGATGGCCTTCGGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: SSRFTQNNPYATDIESRDPRSAA*GWPSAF Trigger: AAAAGCCGAAGGCCATCCGCAAGCTGCACTTCGAGG...ATCTCTGCTCTCTATGTCTGTAGCGTACGGGTTGTTTTGGGTGAATCTTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR GCA 90 bp | TTTTATTCCTCAAGATTCACCCAAAACAACCCGTACGCTACAGACATAGAGAGCCGCTCGAAGTACTTGTaGTTCTCGTGCTCGCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: FYSSRFTQNNPYATDIESRSKYL*FSCSRL Trigger: GAGCCGCGAGCACGAGAAGCACAAGTACTTCGAGCG...GCTCTCTATGTCTGTAGCGTACGGGTTGTTTTGGGTGAATCTTGAGGAATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR GCA 90 bp | ACAATCCCCAACAGACAACAGGTCAAGGCATTTGTGGCTATACTAAAGAAAACTCGGGCGTGGACTTCTTaGTGCGCTTCACCAGAAACC | + |
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Preference number: 4 (lower is better) Translates to: TIPNRQQVKAFVAILKKTRAWTS*CASPET Trigger: GGTTTCTGGTGAAGCGCAGCAAGAAGTCCACGCCCG...AGTTTTCTTTAGTATAGCCACAAATGCCTTGACCTGTTGTCTGTTGGGGATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR TCA 90 bp | TCCAGCAGTTCACAAGCCATAATAAAGCTAATCGTGTGGGAAGTTCAATTTACAGGACGCACAGGCACCTaGAGGAGGATCACCTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: SSSSQAIIKLIVWEVQFTGRTGT*RRITCL Trigger: TAGACAGGTGATCCTCCTTCAGGTGCCTGTGCGTCC...TGTAAATTGAACTTCCCACACGATTAGCTTTATTATGGCTTGTGAACTGCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS CCA 90 bp | CCCTTGCTGGGGAAGGTCTCCCCGCACACTGGGCACAGGTGGCACTaGGCGGTCGCACTCAGGCCCAGCACGCCGGCCGCCTCGCCGTCG | + |
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Preference number: 5 (lower is better) Translates to: PLLGKVSPHTGHRWH*AVALRPSTPAASPS Trigger: CGACGGCGAGGCGGCCGGCGTGCTGGGCCTGAGTGCGACCGCCCAGTGCCACCTGTGCCCAGTGTGCGGGGAGACCTTCCCCAGCAAGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS CCA 90 bp | TGGGCGCCCTTGCTGGGGAAGGTCTCCCCGCACACTGGGCACAGGTaGCACTGGGCGGTCGCACTCAGGCCCAGCACGCCGGCCGCCTCG | + |
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Preference number: 5 (lower is better) Translates to: WAPLLGKVSPHTGHR*HWAVALRPSTPAAS Trigger: CGAGGCGGCCGGCGTGCTGGGCCTGAGTGCGACCGCCCAGTGCCACCTGTGCCCAGTGTGCGGGGAGACCTTCCCCAGCAAGGGCGCCCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS CCA 90 bp | GTGGCGCTCCTGGGCGCCCTTGCTGGGGAAGGTCTCCCCGCACACTaGGCACAGGTGGCACTGGGCGGTCGCACTCAGGCCCAGCACGCC | + |
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Preference number: 5 (lower is better) Translates to: VALLGALAGEGLPAH*AQVALGGRTQAQHA Trigger: GGCGTGCTGGGCCTGAGTGCGACCGCCCAGTGCCACCTGTGCCCAGTGTGCGGGGAGACCTTCCCCAGCAAGGGCGCCCAGGAGCGCCAC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS GCA 90 bp | GCCGGGTCAGGCCCGGGGAGCTGTAGAAGGTGGCCGGGCAGTACTTaGAGGGGAACACCTGGGCAGCGTGCAGCAGGCGCAGGTGGCGCT | + |
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Preference number: 5 (lower is better) Translates to: AGSGPGSCRRWPGST*RGTPGQRAAGAGGA Trigger: AGCGCCACCTGCGCCTGCTGCACGCTGCCCAGGTGTTCCCCTGCAAGTACTGCCCGGCCACCTTCTACAGCTCCCCGGGCCTGACCCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS CCA 90 bp | GCTCGAAGTACTTGTGCTTCTCGTGCTCGCGGCTCACCGGCCGCGTaGGACTGTAGAGAGGCGCCGGGTGCGCAGCCTCGGGGTTGCCGA | + |
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Preference number: 5 (lower is better) Translates to: ARSTCASRARGSPAA*DCREAPGAQPRGCR Trigger: TCGGCAACCCCGAGGCTGCGCACCCGGCGCCTCTCTACAGTCCCACGCGGCCGGTGAGCCGCGAGCACGAGAAGCACAAGTACTTCGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CAA 90 bp | GCGCTCTCTCTTTGTGGGTCTCCGAGTGAAGGCACAGTTCTGGGGGCCCCCGGAGGGGCCTTGGCTGCCTaGGCGGGCGGCTCTGTAGCG | + |
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Preference number: 5 (lower is better) Translates to: ALSLCGSPSEGTVLGAPGGALAA*AGGSVA Trigger: CGCTACAGAGCCGCCCGCCAAGGCAGCCAAGGCCCC...TCCGGGGGCCCCCAGAACTGTGCCTTCACTCGGAGACCCACAAAGAGAGAGCGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS TCA 90 bp | CTTCTTGGCGCAGTGGTGGCACTCGTAGAGCCCGTCCTCGGAGCCTaGCTCGGATACGCCGCCAGGGCTCGGCGTGTCCCGATCGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: LLGAVVALVEPVLGA*LGYAARARRVPIAA Trigger: AGCAGCGATCGGGACACGCCGAGCCCTGGCGGCGTATCCGAGTCAGGCTCCGAGGACGGGCTCTACGAGTGCCACCACTGCGCCAAGAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS TCA 90 bp | CGGCGGGCGTGGGGAAGGACTCAGCGGACACCGGCGAGCCCAGGTTaGAGCTGCGCTCGAAGTACTTGTGCTTCTCGTGCTCGCGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: RRAWGRTQRTPASPG*SCARSTCASRARGS Trigger: TGAGCCGCGAGCACGAGAAGCACAAGTACTTCGAGCGCAGCTTCAACCTGGGCTCGCCGGTGTCCGCTGAGTCCTTCCCCACGCCCGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS CCA 90 bp | GAACCGGCGACGTGGTCACCTCGTCCTCGAAGTGCAGCTTGCGGATaGCCTTCGGCTTTTTGGCGCTCGGGGCCTTGGCTGCCTTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: EPATWSPRPRSAACG*PSAFWRSGPWLPWR Trigger: CCGCCAAGGCAGCCAAGGCCCCGAGCGCCAAAAAGCCGAAGGCCATCCGCAAGCTGCACTTCGAGGACGAGGTGACCACGTCGCCGGTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CAA 90 bp | ATGCTCCACCGAAGCGAAGCGAAGAGGACACTTTCACCCTGGAATGGGAGTAGGTTGGCGCTCGGGGCCTaGGCTGCCTTGGCGGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: MLHRSEAKRTLSPWNGSRLALGA*AALAGG Trigger: GCCGCCCGCCAAGGCAGCCAAGGCCCCGAGCGCCAA...CCTACTCCCATTCCAGGGTGAAAGTGTCCTCTTCGCTTCGCTTCGGTGGAGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CAA 90 bp | GCGCTCTCTCTTTGTGGGTCTCCGAGTGAAGGCACAGTTCTGGGGGCCCCCGGATCCACCGGGCCCTCCTaGATCTTGAGCCCCAGAACC | + |
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Preference number: 5 (lower is better) Translates to: ALSLCGSPSEGTVLGAPGSTGPS*ILSPRT Trigger: GGTTCTGGGGCTCAAGATCAAGGAGGGCCCGGTGGA...TCCGGGGGCCCCCAGAACTGTGCCTTCACTCGGAGACCCACAAAGAGAGAGCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CAA 90 bp | AAATGTCAAAAGTGGCAGGGGGAAAGCTCAGAGAGAGAGAGAGAGAGAGAGAGATGCGCAGCCTCGGGGTaGCCGAAGTGCGCGGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: KCQKWQGESSERERERERCAASG*PKCAAR Trigger: GCGGGCCGCGCACTTCGGCAACCCCGAGGCTGCGCA...TCTCTCTCTCTCTCTCTCTCTCTCTGAGCTTTCCCCCTGCCACTTTTGACATTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CAA 90 bp | GCCAGACTCCAGCAGTTCACAAGCCATAATAAAGCTAATCGTGTGGGAAGTTCACGGTGCGAGGCCAGGTaGGCCGGGCAGCTGAAGACC | + |
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Preference number: 5 (lower is better) Translates to: ARLQQFTSHNKANRVGSSRCEAR*AGQLKT Trigger: GGTCTTCAGCTGCCCGGCCAACCTGGCCTCGCACCG...TGAACTTCCCACACGATTAGCTTTATTATGGCTTGTGAACTGCTGGAGTCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CAA 90 bp | GTCAAAAGTGGCAGGGGGAAAGCTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCCTCGAAGTGCAGCTaGCGGATGGCCTTCGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: VKSGRGKAQRERERERERSSKCS*RMAFGF Trigger: AAAGCCGAAGGCCATCCGCAAGCTGCACTTCGAGGA...TCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAGCTTTCCCCCTGCCACTTTTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CAA 90 bp | AAGGCATTTTATTCCTCAAGATTCACCCAAAACAACCCGTACGCTACAGACATAGGCACCGGCCGTGGTTaGTGCCAGCGGCGGTGCGAG | + |
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Preference number: 5 (lower is better) Translates to: KAFYSSRFTQNNPYATDIGTGRG*CQRRCE Trigger: CTCGCACCGCCGCTGGCACAAACCACGGCCGGTGCC...TATGTCTGTAGCGTACGGGTTGTTTTGGGTGAATCTTGAGGAATAAAATGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CAA 90 bp | GAGATTGGTAGGCAGAGCAAACCGCATTTTCTAGACCATGAACACAGCGAATACGTGGCCGGGCAGTACTaGCAGGGGAACACCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: EIGRQSKPHFLDHEHSEYVAGQY*QGNTWA Trigger: TGCCCAGGTGTTCCCCTGCAAGTACTGCCCGGCCAC...GTATTCGCTGTGTTCATGGTCTAGAAAATGCGGTTTGCTCTGCCTACCAATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CAA 90 bp | TCCTCAAGATTCACCCAAAACAACCCGTACGCTACAGACATAGAGAGCAGAGATACGGGCGTGGACTTCTaGCTGCGCTTCACCAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: SSRFTQNNPYATDIESRDTGVDF*LRFTRN Trigger: GTTTCTGGTGAAGCGCAGCAAGAAGTCCACGCCCGT...ATCTCTGCTCTCTATGTCTGTAGCGTACGGGTTGTTTTGGGTGAATCTTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CAA 90 bp | TTTTATTCCTCAAGATTCACCCAAAACAACCCGTACGCTACAGACATAGAGAGCAACGCAGTGCCCATCTaGAGCTCGGCGGGAGCGAAG | + |
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Preference number: 5 (lower is better) Translates to: FYSSRFTQNNPYATDIESNAVPI*SSAGAK Trigger: CTTCGCTCCCGCCGAGCTCAAGATGGGCACTGCGTT...GCTCTCTATGTCTGTAGCGTACGGGTTGTTTTGGGTGAATCTTGAGGAATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CAA 90 bp | TCCAGCAGTTCACAAGCCATAATAAAGCTAATCGTGTGGGAAGTTCAATTTACAGGGCCCTCCTTGATCTaGAGCCCCAGAACCGGCGAC | + |
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Preference number: 5 (lower is better) Translates to: SSSSQAIIKLIVWEVQFTGPSLI*SPRTGD Trigger: GTCGCCGGTTCTGGGGCTCAAGATCAAGGAGGGCCC...TGTAAATTGAACTTCCCACACGATTAGCTTTATTATGGCTTGTGAACTGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CAA 90 bp | TCCAGCAGTTCACAAGCCATAATAAAGCTAATCGTGTGGGAAGTTCAATTTACAACCGGCGAGCCCAGGTaGAAGCTGCGCTCGAAGTAC | + |
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Preference number: 5 (lower is better) Translates to: SSSSQAIIKLIVWEVQFTTGEPR*KLRSKY Trigger: GTACTTCGAGCGCAGCTTCAACCTGGGCTCGCCGGT...TGTAAATTGAACTTCCCACACGATTAGCTTTATTATGGCTTGTGAACTGCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS-3UTR CAA 90 bp | TCCAGCAGTTCACAAGCCATAATAAAGCTAATCGTGTGGGAAGTTCAATTTACACTGCGCTCGAAGTACTaGTGCTTCTCGTGCTCGCGG | + |
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Preference number: 5 (lower is better) Translates to: SSSSQAIIKLIVWEVQFTLRSKY*CFSCSR Trigger: CCGCGAGCACGAGAAGCACAAGTACTTCGAGCGCAG...TGTAAATTGAACTTCCCACACGATTAGCTTTATTATGGCTTGTGAACTGCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS GCA 72 bp | GACTGTAGAGAGGCGCCGGGTGCGCAGCCTCGGGGTTaGCGAAGTGCGCGGCCCGCGGGCCTGGCGGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: DCREAPGAQPRG*RSARPAGLAGV Trigger: CACCCCCGCCAGGCCCGCGGGCCGCGCACTTCGGCAACCCCGAGGCTGCGCACCCGGCGCCTCTCTACAGTC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS CCA 72 bp | CGCCGCTGCCTCCCCCTGCGAGCAGCGCGGCGGGCGTaGGGAAGGACTCAGCGGACACCGGCGAGCCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: RRCLPLRAARRA*GRTQRTPASPG Trigger: ACCTGGGCTCGCCGGTGTCCGCTGAGTCCTTCCCCACGCCCGCCGCGCTGCTCGCAGGGGGAGGCAGCGGCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS CAA 72 bp | CCCGCGCGACCCCGCGGCGCCTCCACCGGGCCCTCCTaGATCTTGAGCCCCAGAACCGGCGACGTGGTCACC | + |
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Preference number: 6 (lower is better) Translates to: PARPRGASTGPS*ILSPRTGDVVT Trigger: GGTGACCACGTCGCCGGTTCTGGGGCTCAAGATCAAGGAGGGCCCGGTGGAGGCGCCGCGGGGTCGCGCGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS CCA 72 bp | CTGGGCGCCCTTGCTGGGGAAGGTCTCCCCGCACACTaGGCACAGGTGGCACTGGGCGGTCGCACTCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LGALAGEGLPAH*AQVALGGRTQA Trigger: GGCCTGAGTGCGACCGCCCAGTGCCACCTGTGCCCAGTGTGCGGGGAGACCTTCCCCAGCAAGGGCGCCCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS CCA 72 bp | ACCTGGGCAGCGTGCAGCAGGCGCAGGTGGCGCTCCTaGGCGCCCTTGCTGGGGAAGGTCTCCCCGCACACT | + |
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Preference number: 6 (lower is better) Translates to: TWAACSRRRWRS*APLLGKVSPHT Trigger: AGTGTGCGGGGAGACCTTCCCCAGCAAGGGCGCCCAGGAGCGCCACCTGCGCCTGCTGCACGCTGCCCAGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS TCA 72 bp | GCAGTGGTGGCACTCGTAGAGCCCGTCCTCGGAGCCTaGCTCGGATACGCCGCCAGGGCTCGGCGTGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: AVVALVEPVLGA*LGYAARARRVP Trigger: CGGGACACGCCGAGCCCTGGCGGCGTATCCGAGTCAGGCTCCGAGGACGGGCTCTACGAGTGCCACCACTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS CCA 72 bp | ACTTGTGCTTCTCGTGCTCGCGGCTCACCGGCCGCGTaGGACTGTAGAGAGGCGCCGGGTGCGCAGCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: TCASRARGSPAA*DCREAPGAQPR Trigger: CCGAGGCTGCGCACCCGGCGCCTCTCTACAGTCCCACGCGGCCGGTGAGCCGCGAGCACGAGAAGCACAAGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS GCA 72 bp | GGCCCGGGGAGCTGTAGAAGGTGGCCGGGCAGTACTTaGAGGGGAACACCTGGGCAGCGTGCAGCAGGCGCA | + |
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Preference number: 6 (lower is better) Translates to: GPGSCRRWPGST*RGTPGQRAAGA Trigger: TGCGCCTGCTGCACGCTGCCCAGGTGTTCCCCTGCAAGTACTGCCCGGCCACCTTCTACAGCTCCCCGGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS CCA 72 bp | TGTCCTCGCCGCCGCGGACCCGGTAGGACACGGGCGTaGACTTCTTGCTGCGCTTCACCAGAAACCCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: CPRRRGPGRTRA*TSCCASPETRG Trigger: CCCGCGGGTTTCTGGTGAAGCGCAGCAAGAAGTCCACGCCCGTGTCCTACCGGGTCCGCGGCGGCGAGGACA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS CAA 90 bp | GCGGCGGGCGTGGGGAAGGACTCAGCGGACACCGGCGAGCCCAGGTaGAAGCTGCGCTCGAAGTACTTGTGCTTCTCGTGCTCGCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: AAGVGKDSADTGEPR*KLRSKYLCFSCSRL Trigger: GAGCCGCGAGCACGAGAAGCACAAGTACTTCGAGCGCAGCTTCAACCTGGGCTCGCCGGTGTCCGCTGAGTCCTTCCCCACGCCCGCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS CCA 72 bp | CCTCGAAGTGCAGCTTGCGGATGGCCTTCGGCTTTTTaGCGCTCGGGGCCTTGGCTGCCTTGGCGGGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: PRSAACGWPSAF*RSGPWLPWRAA Trigger: AGCCGCCCGCCAAGGCAGCCAAGGCCCCGAGCGCCAAAAAGCCGAAGGCCATCCGCAAGCTGCACTTCGAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS CAA 72 bp | TCCTCGAAGTGCAGCTTGCGGATGGCCTTCGGCTTTTaGGCGCTCGGGGCCTTGGCTGCCTTGGCGGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: SSKCSLRMAFGF*ALGALAALAGG Trigger: GCCGCCCGCCAAGGCAGCCAAGGCCCCGAGCGCCAAAAAGCCGAAGGCCATCCGCAAGCTGCACTTCGAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS GCA 72 bp | GGCGAGCCCAGGTTGAAGCTGCGCTCGAAGTACTTGTaGTTCTCGTGCTCGCGGCTCACCGGCCGCGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GEPRLKLRSKYL*FSCSRLTGRVG Trigger: TCCCACGCGGCCGGTGAGCCGCGAGCACGAGAAGCACAAGTACTTCGAGCGCAGCTTCAACCTGGGCTCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS GCA 72 bp | CCGGCGACGTGGTCACCTCGTCCTCGAAGTGCAGCTTaGGGATGGCCTTCGGCTTTTTGGCGCTCGGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: PATWSPRPRSAA*GWPSAFWRSGP Trigger: AGGCCCCGAGCGCCAAAAAGCCGAAGGCCATCCGCAAGCTGCACTTCGAGGACGAGGTGACCACGTCGCCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS CAA 72 bp | ACCGGCGAGCCCAGGTTGAAGCTGCGCTCGAAGTACTaGTGCTTCTCGTGCTCGCGGCTCACCGGCCGCGTG | + |
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Preference number: 6 (lower is better) Translates to: TGEPRLKLRSKY*CFSCSRLTGRV Trigger: CACGCGGCCGGTGAGCCGCGAGCACGAGAAGCACAAGTACTTCGAGCGCAGCTTCAACCTGGGCTCGCCGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS CCA 72 bp | ACGTGGTCACCTCGTCCTCGAAGTGCAGCTTGCGGATaGCCTTCGGCTTTTTGGCGCTCGGGGCCTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TWSPRPRSAACG*PSAFWRSGPWL Trigger: CAGCCAAGGCCCCGAGCGCCAAAAAGCCGAAGGCCATCCGCAAGCTGCACTTCGAGGACGAGGTGACCACGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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| CDS TCA 72 bp | TGGGGAAGGACTCAGCGGACACCGGCGAGCCCAGGTTaGAGCTGCGCTCGAAGTACTTGTGCTTCTCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: WGRTQRTPASPG*SCARSTCASRA Trigger: AGCACGAGAAGCACAAGTACTTCGAGCGCAGCTTCAACCTGGGCTCGCCGGTGTCCGCTGAGTCCTTCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089257.6 |
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