Pregenerated sensors for INSIG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003721Ensembl transcript IDs: ENSMUST00000003818.14, ENSMUST00000071064.13, ENSMUST00000159085.8, ENSMUST00000159125.2, ENSMUST00000160688.2, ENSMUST00000160968.8, ENSMUST00000161818.2, ENSMUST00000162582.2, ENSMUST00000162790.2, ENSMUST00000186915.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GATAGCAACAGAGACAACACATGTGGGTGCTGTGACGAACACAGCTaGTTAGAAACGGGAAAAGGCACACCAGCCGGTGAGAGGGAACGG | + |
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Preference number: 1 (lower is better) Translates to: DSNRDNTCGCCDEHS*LETGKGTPAGERER Trigger: CCGTTCCCTCTCACCGGCTGGTGTGCCTTTTCCCGTTTCTAATCAGCTGTGTTCGTCACAGCACCCACATGTGTTGTCTCTGTTGCTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| 3UTR TCA 90 bp | TGTTCCTGTCATCCATGCACTGGAGCTGTGAGCTTCAGTAGCCAGTaGCAATTAGCATCACTTTGGCCTCTGTGGCAGAGAGAGGGCTAC | + |
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Preference number: 1 (lower is better) Translates to: CSCHPCTGAVSFSSQ*QLASLWPLWQREGY Trigger: GTAGCCCTCTCTCTGCCACAGAGGCCAAAGTGATGCTAATTGTCACTGGCTACTGAAGCTCACAGCTCCAGTGCATGGATGACAGGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| 3UTR TCA 90 bp | ACATATTCAGTATGGAGTACTCTTGGGATGTTCACACTCTGCGCCTaGGAACACAAAGCACATTACACTCCAGTGTACAAGATTTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: TYSVWSTLGMFTLCA*EHKAHYTPVYKISV Trigger: GACTGAAATCTTGTACACTGGAGTGTAATGTGCTTTGTGTTCTCAGGCGCAGAGTGTGAACATCCCAAGAGTACTCCATACTGAATATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| 3UTR GCA 90 bp | TTTCCAAATGTAGACTCAAAGTGGGGTGATGTTGATAACCACCTCTaGCCATCACACAGCCTTCTGAAGAAATCGGGAAAGTATTCTTTG | + |
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Preference number: 1 (lower is better) Translates to: FPNVDSKWGDVDNHL*PSHSLLKKSGKYSL Trigger: CAAAGAATACTTTCCCGATTTCTTCAGAAGGCTGTGTGATGGGCAGAGGTGGTTATCAACATCACCCCACTTTGAGTCTACATTTGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| 3UTR TCA 90 bp | AACCATTCTATGGAAGTTCATGAGTACCATATAAGACTCAAACTCTaGAACGATAGCAACAGAGACAACACATGTGGGTGCTGTGACGAA | + |
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Preference number: 1 (lower is better) Translates to: NHSMEVHEYHIRLKL*NDSNRDNTCGCCDE Trigger: TTCGTCACAGCACCCACATGTGTTGTCTCTGTTGCTATCGTTTCAGAGTTTGAGTCTTATATGGTACTCATGAACTTCCATAGAATGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| 3UTR-3UTR CCA 90 bp | CACAGTAGTCAGAAGAATTTACCCTTGTGTGCCAGTCAATTAACAATTTCAGAATCACTTTGGCCTCTGTaGCAGAGAGAGGGCTACACA | + |
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Preference number: 2 (lower is better) Translates to: HSSQKNLPLCASQLTISESLWPL*QREGYT Trigger: TGTGTAGCCCTCTCTCTGCCACAGAGGCCAAAGTGA...TTCTGAAATTGTTAATTGACTGGCACACAAGGGTAAATTCTTCTGACTACTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| 3UTR CAA 90 bp | CTACTACCATTAGGCTTGTGTATACATATTCAGTATGGAGTACTCTaGGGATGTTCACACTCTGCGCCTGAGAACACAAAGCACATTACA | + |
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Preference number: 2 (lower is better) Translates to: LLPLGLCIHIQYGVL*GCSHSAPENTKHIT Trigger: TGTAATGTGCTTTGTGTTCTCAGGCGCAGAGTGTGAACATCCCAAGAGTACTCCATACTGAATATGTATACACAAGCCTAATGGTAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| 3UTR-3UTR TCA 90 bp | CAGTCAATTAACAATTTCAGAAATGCAAAGCGAGCGGAGAGTCAGCTGATCGACGGCACATTGACATTGTaGTACAATGTATGCTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: QSINNFRNAKRAESQLIDGTLTL*YNVCCV Trigger: AACACAGCATACATTGTATCACAATGTCAATGTGCC...GTCGATCAGCTGACTCTCCGCTCGCTTTGCATTTCTGAAATTGTTAATTGACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| 3UTR-3UTR TCA 90 bp | CAGTCAATTAACAATTTCAGAAATGCAAAGCGAGCGGAGAGTCAGCTGATCGACACACGTTTGGCACATTaGCATTGTGATACAATGTAT | + |
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Preference number: 2 (lower is better) Translates to: QSINNFRNAKRAESQLIDTRLAH*HCDTMY Trigger: ATACATTGTATCACAATGTCAATGTGCCAAACGTGT...GTCGATCAGCTGACTCTCCGCTCGCTTTGCATTTCTGAAATTGTTAATTGACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| 3UTR-3UTR GCA 90 bp | TGTGGCAGAGAGAGGGCTACACAGTATTCCCAAGCACATTCATCTAAACAAAGCCGGCCAGCTATAATTTaGTTTCTATTTGCTTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: CGRERATQYSQAHSSKQSRPAII*FLFALF Trigger: AAACAAAGCAAATAGAAAGCAAATTATAGCTGGCCG...GCTTTGTTTAGATGAATGTGCTTGGGAATACTGTGTAGCCCTCTCTCTGCCACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| 3UTR TCA 72 bp | AGAGACAACACATGTGGGTGCTGTGACGAACACAGCTaGTTAGAAACGGGAAAAGGCACACCAGCCGGTGAG | + |
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Preference number: 3 (lower is better) Translates to: RDNTCGCCDEHS*LETGKGTPAGE Trigger: CTCACCGGCTGGTGTGCCTTTTCCCGTTTCTAATCAGCTGTGTTCGTCACAGCACCCACATGTGTTGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| 3UTR TCA 72 bp | CATCCATGCACTGGAGCTGTGAGCTTCAGTAGCCAGTaGCAATTAGCATCACTTTGGCCTCTGTGGCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: HPCTGAVSFSSQ*QLASLWPLWQR Trigger: TCTCTGCCACAGAGGCCAAAGTGATGCTAATTGTCACTGGCTACTGAAGCTCACAGCTCCAGTGCATGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| 3UTR GCA 72 bp | GTAGACTCAAAGTGGGGTGATGTTGATAACCACCTCTaGCCATCACACAGCCTTCTGAAGAAATCGGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: VDSKWGDVDNHL*PSHSLLKKSGK Trigger: CTTTCCCGATTTCTTCAGAAGGCTGTGTGATGGGCAGAGGTGGTTATCAACATCACCCCACTTTGAGTCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| 3UTR TCA 72 bp | GTATGGAGTACTCTTGGGATGTTCACACTCTGCGCCTaGGAACACAAAGCACATTACACTCCAGTGTACAAG | + |
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Preference number: 3 (lower is better) Translates to: VWSTLGMFTLCA*EHKAHYTPVYK Trigger: CTTGTACACTGGAGTGTAATGTGCTTTGTGTTCTCAGGCGCAGAGTGTGAACATCCCAAGAGTACTCCATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| 3UTR-3UTR CAA 90 bp | CAGTCAATTAACAATTTCAGAAATGCAAAGCGAGCGGAGAGTCAGCTGATCGACACAATTAGCATCACTTaGGCCTCTGTGGCAGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: QSINNFRNAKRAESQLIDTISIT*ASVAER Trigger: TCTCTCTGCCACAGAGGCCAAAGTGATGCTAATTGT...GTCGATCAGCTGACTCTCCGCTCGCTTTGCATTTCTGAAATTGTTAATTGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| 3UTR TCA 72 bp | ATGGAAGTTCATGAGTACCATATAAGACTCAAACTCTaGAACGATAGCAACAGAGACAACACATGTGGGTGC | + |
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Preference number: 3 (lower is better) Translates to: MEVHEYHIRLKL*NDSNRDNTCGC Trigger: GCACCCACATGTGTTGTCTCTGTTGCTATCGTTTCAGAGTTTGAGTCTTATATGGTACTCATGAACTTCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| CDS-3UTR TCA 90 bp | CCAGCATCTTCCGACTGCACTGATGAAGGCCACACACTCAGGCCCTCTATAGCTCTTTTTAGGCCGAGGTaGCTCCGTCTCTCCTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: PASSDCTDEGHTLRPSIALFRPR*LRLSFR Trigger: GCGGAAGGAGAGACGGAGTCACCTCGGCCTAAAAAG...AGCTATAGAGGGCCTGAGTGTGTGGCCTTCATCAGTGCAGTCGGAAGATGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| CDS-3UTR TCA 90 bp | CCAGCATCTTCCGACTGCACTGATGAAGGCCACACACTCAGGCCCTCTATAGCTTCACACTCTGGCTGGTaGCAGAGGAAATGTATGGGC | + |
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Preference number: 4 (lower is better) Translates to: PASSDCTDEGHTLRPSIASHSGW*QRKCMG Trigger: GCCCATACATTTCCTCTGTCACCAGCCAGAGTGTGA...AGCTATAGAGGGCCTGAGTGTGTGGCCTTCATCAGTGCAGTCGGAAGATGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| CDS-3UTR TCA 90 bp | CACACCACACACATACACAATCAAGGGAAAACTGGGTCCTCCGTTGGTGAACCTCCGCCACGCAGCGCATaGCACTGGACCACTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: HTTHIHNQGKTGSSVGEPPPRSA*HWTTLF Trigger: AAAGAGAGTGGTCCAGTGTCATGCGCTGCGTGGCGG...AGGTTCACCAACGGAGGACCCAGTTTTCCCTTGATTGTGTATGTGTGTGGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
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| CDS-3UTR TCA 90 bp | GAAGCAATCACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACCCGCCACGCAGCGCATaGCACTGGACCACTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: EAITDCKNMCVTHTHTPHPPRSA*HWTTLF Trigger: AAAGAGAGTGGTCCAGTGTCATGCGCTGCGTGGCGG...GTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTGATTGCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
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| CDS-3UTR TCA 90 bp | CACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACCCGCCACGCAGCGCATaGCACTGGACCACTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: HRLQKHVCHTHTHTTHIHPPRSA*HWTTLF Trigger: AAAGAGAGTGGTCCAGTGTCATGCGCTGCGTGGCGG...GTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
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| CDS-3UTR GCA 90 bp | CACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACTCACAGCTGAGGCTGTaGCGCAGCATGGTGGTACCC | + |
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Preference number: 4 (lower is better) Translates to: HRLQKHVCHTHTHTTHIHSQLRL*RSMVVP Trigger: GGGTACCACCATGCTGCGGCACAGCCTCAGCTGTGA...GTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
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| CDS-3UTR TCA 90 bp | CACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACCTTTTTAGGCCGAGGTaGCTCCGTCTCTCCTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: HRLQKHVCHTHTHTTHIHLFRPR*LRLSFR Trigger: GCGGAAGGAGAGACGGAGTCACCTCGGCCTAAAAAG...GTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
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| CDS-3UTR TCA 90 bp | TCACTTTGGCCTCTGTGGCAGAGAGAGGGCTACACAGTATTCCCAAGCACATTCACAGTGCAGCCAGTGTaGGGGAAAACTGGAAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: SLWPLWQREGYTVFPSTFTVQPV*GKTGSC Trigger: ACAACTTCCAGTTTTCCCTCACACTGGCTGCACTGT...GAATGTGCTTGGGAATACTGTGTAGCCCTCTCTCTGCCACAGAGGCCAAAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| CDS-3UTR TCA 90 bp | CACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACCCACCACAGTCCTACTaGCAGTGCAGCCAGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: HRLQKHVCHTHTHTTHIHPPQSY*QCSQCE Trigger: CTCACACTGGCTGCACTGTCAGTAGGACTGTGGTGG...GTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
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| CDS-3UTR GCA 90 bp | CAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAATCACAGCTGAGGCTGTaGCGCAGCATGGTGGTACCC | + |
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Preference number: 4 (lower is better) Translates to: QTAKTCVSHTHTHHTHTQSQLRL*RSMVVP Trigger: GGGTACCACCATGCTGCGGCACAGCCTCAGCTGTGA...TTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
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| CDS-3UTR GCA 90 bp | GGAAAAGGCACACCAGCCGGTGAGAGGGAACGGCCAGCTATAATTTGCTTTCTACTAGATGCCTGTCAATaGAGGGGTACAACAGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: GKGTPAGERERPAIICFLLDACQ*RGTTAQ Trigger: TTGGGCTGTTGTACCCCTGCATTGACAGGCATCTAG...TAGAAAGCAAATTATAGCTGGCCGTTCCCTCTCACCGGCTGGTGTGCCTTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| CDS-3UTR TCA 90 bp | CAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAACTTTTTAGGCCGAGGTaGCTCCGTCTCTCCTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: QTAKTCVSHTHTHHTHTQLFRPR*LRLSFR Trigger: GCGGAAGGAGAGACGGAGTCACCTCGGCCTAAAAAG...TTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
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| CDS-3UTR TCA 90 bp | AGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAATCCGCCACGCAGCGCATaGCACTGGACCACTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: RLQKHVCHTHTHTTHIHNPPRSA*HWTTLF Trigger: AAAGAGAGTGGTCCAGTGTCATGCGCTGCGTGGCGG...ATTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
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| CDS-3UTR GCA 90 bp | AGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAATTCACAGCTGAGGCTGTaGCGCAGCATGGTGGTACCC | + |
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Preference number: 4 (lower is better) Translates to: RLQKHVCHTHTHTTHIHNSQLRL*RSMVVP Trigger: GGGTACCACCATGCTGCGGCACAGCCTCAGCTGTGA...ATTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
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| CDS-3UTR GCA 90 bp | AAAACATGTGTGTCACACACACACACACACCACACACATACACAATCAAGGGAATCACAGCTGAGGCTGTaGCGCAGCATGGTGGTACCC | + |
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Preference number: 4 (lower is better) Translates to: KTCVSHTHTHHTHTQSRESQLRL*RSMVVP Trigger: GGGTACCACCATGCTGCGGCACAGCCTCAGCTGTGA...TTCCCTTGATTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
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| CDS-3UTR TCA 90 bp | ACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAATCACTTTTTAGGCCGAGGTaGCTCCGTCTCTCCTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: TAKTCVSHTHTHHTHTQSLFRPR*LRLSFR Trigger: GCGGAAGGAGAGACGGAGTCACCTCGGCCTAAAAAG...TGATTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
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| CDS-3UTR TCA 90 bp | CAGTCAATTAACAATTTCAGAAATGCAAAGCGAGCGGAGAGTCAGCTGATCGACCCAGGAACACTCCAATaGAGAAGAGTACCACCCCGC | + |
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Preference number: 4 (lower is better) Translates to: QSINNFRNAKRAESQLIDPGTLQ*RRVPPR Trigger: GCGGGGTGGTACTCTTCTTCATTGGAGTGTTCCTGG...GTCGATCAGCTGACTCTCCGCTCGCTTTGCATTTCTGAAATTGTTAATTGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
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| CDS-3UTR TCA 90 bp | AGAAGCAATCACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACCAGGAACACTCCAATaGAGAAGAGTACCACCCCGC | + |
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Preference number: 4 (lower is better) Translates to: RSNHRLQKHVCHTHTHTTPGTLQ*RRVPPR Trigger: GCGGGGTGGTACTCTTCTTCATTGGAGTGTTCCTGG...TGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTGATTGCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
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| CDS-3UTR TCA 90 bp | AGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAATCCACCACAGTCCTACTaGCAGTGCAGCCAGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: RLQKHVCHTHTHTTHIHNPPQSY*QCSQCE Trigger: CTCACACTGGCTGCACTGTCAGTAGGACTGTGGTGG...ATTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
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| CDS-3UTR TCA 90 bp | ACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAATCACCACCACAGTCCTACTaGCAGTGCAGCCAGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: TAKTCVSHTHTHHTHTQSPPQSY*QCSQCE Trigger: CTCACACTGGCTGCACTGTCAGTAGGACTGTGGTGG...TGATTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
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| CDS-3UTR TCA 90 bp | CACACCACACACATACACAATCAAGGGAAAACTGGGTCCTCCGTTGGTGAACCTTCATACATTGCCAGTTaGCGGCCAATGTTTCCCATC | + |
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Preference number: 4 (lower is better) Translates to: HTTHIHNQGKTGSSVGEPSYIAS*RPMFPI Trigger: GATGGGAAACATTGGCCGTCAACTGGCAATGTATGA...AGGTTCACCAACGGAGGACCCAGTTTTCCCTTGATTGTGTATGTGTGTGGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
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| CDS-3UTR TCA 90 bp | ACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAATCACCAGGAACACTCCAATaGAGAAGAGTACCACCCCGC | + |
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Preference number: 4 (lower is better) Translates to: TAKTCVSHTHTHHTHTQSPGTLQ*RRVPPR Trigger: GCGGGGTGGTACTCTTCTTCATTGGAGTGTTCCTGG...TGATTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
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| CDS-3UTR CCA 90 bp | GAAGCAATCACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACCACGTTCACACTCTaGCTGGTGACAGAGGAAATG | + |
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Preference number: 4 (lower is better) Translates to: EAITDCKNMCVTHTHTPHTTFTL*LVTEEM Trigger: CATTTCCTCTGTCACCAGCCAGAGTGTGAACGTGGT...GTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTGATTGCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
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| CDS-3UTR CCA 90 bp | CACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACACCACGTTCACACTCTaGCTGGTGACAGAGGAAATG | + |
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Preference number: 4 (lower is better) Translates to: HRLQKHVCHTHTHTTHIHTTFTL*LVTEEM Trigger: CATTTCCTCTGTCACCAGCCAGAGTGTGAACGTGGT...GTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
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| CDS-3UTR TCA 90 bp | CAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAAACAGTGCAGCCAGTGTaGGGGAAAACTGGAAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: QTAKTCVSHTHTHHTHTQTVQPV*GKTGSC Trigger: ACAACTTCCAGTTTTCCCTCACACTGGCTGCACTGT...TTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
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| CDS-3UTR TCA 90 bp | CACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACTCATACATTGCCAGTTaGCGGCCAATGTTTCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: HRLQKHVCHTHTHTTHIHSYIAS*RPMFPI Trigger: GATGGGAAACATTGGCCGTCAACTGGCAATGTATGA...GTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS-3UTR TCA 90 bp | GCAATCACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATCATACATTGCCAGTTaGCGGCCAATGTTTCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: AITDCKNMCVTHTHTPHTSYIAS*RPMFPI Trigger: GATGGGAAACATTGGCCGTCAACTGGCAATGTATGA...TGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTGATTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS-3UTR CCA 90 bp | GCAATCACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACAGACAGAGGAAATGTATaGGCCACACTTTTTAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AITDCKNMCVTHTHTPHTDRGNV*ATLFRP Trigger: CGGCCTAAAAAGTGTGGCCCATACATTTCCTCTGTC...TGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTGATTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
||
| CDS-3UTR TCA 90 bp | TGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAATCAAGACAGTGCAGCCAGTGTaGGGGAAAACTGGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CKNMCVTHTHTPHTYTIKTVQPV*GKTGSC Trigger: ACAACTTCCAGTTTTCCCTCACACTGGCTGCACTGT...CTTGATTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS-3UTR TCA 90 bp | AAAACATGTGTGTCACACACACACACACACCACACACATACACAATCAAGGGAAACAGTGCAGCCAGTGTaGGGGAAAACTGGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KTCVSHTHTHHTHTQSRETVQPV*GKTGSC Trigger: ACAACTTCCAGTTTTCCCTCACACTGGCTGCACTGT...TTCCCTTGATTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS-3UTR TCA 90 bp | ACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAATCAACAGTGCAGCCAGTGTaGGGGAAAACTGGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TAKTCVSHTHTHHTHTQSTVQPV*GKTGSC Trigger: ACAACTTCCAGTTTTCCCTCACACTGGCTGCACTGT...TGATTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS-3UTR TCA 90 bp | TCAAATACCGAAAGGTTGGTAACTGATTTACAGAAGCAATCACAGACTGCAAAACCACCACAGTCCTACTaGCAGTGCAGCCAGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNTERLVTDLQKQSQTAKPPQSY*QCSQCE Trigger: CTCACACTGGCTGCACTGTCAGTAGGACTGTGGTGG...TTTTGCAGTCTGTGATTGCTTCTGTAAATCAGTTACCAACCTTTCGGTATTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS-3UTR CCA 90 bp | CAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAAGACAGAGGAAATGTATaGGCCACACTTTTTAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QTAKTCVSHTHTHHTHTQDRGNV*ATLFRP Trigger: CGGCCTAAAAAGTGTGGCCCATACATTTCCTCTGTC...TTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
||
| CDS-3UTR TCA 90 bp | TCAAATACCGAAAGGTTGGTAACTGATTTACAGAAGCAATCACAGACTGCAAAACCAGGAACACTCCAATaGAGAAGAGTACCACCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SNTERLVTDLQKQSQTAKPGTLQ*RRVPPR Trigger: GCGGGGTGGTACTCTTCTTCATTGGAGTGTTCCTGG...TTTTGCAGTCTGTGATTGCTTCTGTAAATCAGTTACCAACCTTTCGGTATTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
||
| CDS-3UTR TCA 90 bp | TGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAATCAAGTCATACATTGCCAGTTaGCGGCCAATGTTTCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: CKNMCVTHTHTPHTYTIKSYIAS*RPMFPI Trigger: GATGGGAAACATTGGCCGTCAACTGGCAATGTATGA...CTTGATTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS-3UTR CCA 90 bp | CTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAATCAAGACAGAGGAAATGTATaGGCCACACTTTTTAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LQKHVCHTHTHTTHIHNQDRGNV*ATLFRP Trigger: CGGCCTAAAAAGTGTGGCCCATACATTTCCTCTGTC...TTGATTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
||
| CDS-3UTR CCA 90 bp | AACTCTGAAACGATAGCAACAGAGACAACACATGTGGGTGCTGTGACGAACACAAGTGTGAGGGAAAACTaGAAGTTGTTGTCGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSETIATETTHVGAVTNTSVREN*KLLSKS Trigger: AGACTTCGACAACAACTTCCAGTTTTCCCTCACACT...TGTGTTCGTCACAGCACCCACATGTGTTGTCTCTGTTGCTATCGTTTCAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
||
| CDS-3UTR CCA 90 bp | GAAGCAATCACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACAGTGTGAGGGAAAACTaGAAGTTGTTGTCGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EAITDCKNMCVTHTHTPHSVREN*KLLSKS Trigger: AGACTTCGACAACAACTTCCAGTTTTCCCTCACACT...GTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTGATTGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS-3UTR TCA 90 bp | GCAATCACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACAATGAAAAGATGCTCGTaGTCACATCTGGTGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AITDCKNMCVTHTHTPHTMKRCS*SHLVEK Trigger: TTTTTCCACCAGATGTGATCACGAGCATCTTTTCAT...TGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTGATTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
||
| CDS-3UTR TCA 90 bp | CACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACATGAAAAGATGCTCGTaGTCACATCTGGTGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HRLQKHVCHTHTHTTHIHMKRCS*SHLVEK Trigger: TTTTTCCACCAGATGTGATCACGAGCATCTTTTCAT...GTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
||
| CDS-3UTR CCA 90 bp | CAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAAAGTGTGAGGGAAAACTaGAAGTTGTTGTCGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTAKTCVSHTHTHHTHTQSVREN*KLLSKS Trigger: AGACTTCGACAACAACTTCCAGTTTTCCCTCACACT...TTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
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| 3UTR CAA 72 bp | TTAGGCTTGTGTATACATATTCAGTATGGAGTACTCTaGGGATGTTCACACTCTGCGCCTGAGAACACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGLCIHIQYGVL*GCSHSAPENTK Trigger: CTTTGTGTTCTCAGGCGCAGAGTGTGAACATCCCAAGAGTACTCCATACTGAATATGTATACACAAGCCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
||
| CDS-3UTR TCA 90 bp | TGTGGCAGAGAGAGGGCTACACAGTATTCCCAAGCACATTCATCTAAACAAAGCTCTCTTTTAAATTTATaGGGTTCTCCTAGATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CGRERATQYSQAHSSKQSSLLNL*GSPRCL Trigger: CAGGCATCTAGGAGAACCTCATAAATTTAAAAGAGA...GCTTTGTTTAGATGAATGTGCTTGGGAATACTGTGTAGCCCTCTCTCTGCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003818.14 |
||
| CDS-3UTR TCA 90 bp | GCAATCACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATCTCTTTTAAATTTATaGGGTTCTCCTAGATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AITDCKNMCVTHTHTPHTSLLNL*GSPRCL Trigger: CAGGCATCTAGGAGAACCTCATAAATTTAAAAGAGA...TGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTGATTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
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| CDS-3UTR CCA 90 bp | AAAACATGTGTGTCACACACACACACACACCACACACATACACAATCAAGGGAAAGTGTGAGGGAAAACTaGAAGTTGTTGTCGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTCVSHTHTHHTHTQSRESVREN*KLLSKS Trigger: AGACTTCGACAACAACTTCCAGTTTTCCCTCACACT...TTCCCTTGATTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS-3UTR TCA 90 bp | TGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAATCAAGATGAAAAGATGCTCGTaGTCACATCTGGTGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CKNMCVTHTHTPHTYTIKMKRCS*SHLVEK Trigger: TTTTTCCACCAGATGTGATCACGAGCATCTTTTCAT...CTTGATTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
||
| CDS-3UTR TCA 90 bp | TGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAATCAAGTCTCTTTTAAATTTATaGGGTTCTCCTAGATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CKNMCVTHTHTPHTYTIKSLLNL*GSPRCL Trigger: CAGGCATCTAGGAGAACCTCATAAATTTAAAAGAGA...CTTGATTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAATCATCTCTTTTAAATTTATaGGGTTCTCCTAGATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAKTCVSHTHTHHTHTQSSLLNL*GSPRCL Trigger: CAGGCATCTAGGAGAACCTCATAAATTTAAAAGAGA...TGATTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
||
| CDS-3UTR TCA 90 bp | TCAAATACCGAAAGGTTGGTAACTGATTTACAGAAGCAATCACAGACTGCAAAAATGAAAAGATGCTCGTaGTCACATCTGGTGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SNTERLVTDLQKQSQTAKMKRCS*SHLVEK Trigger: TTTTTCCACCAGATGTGATCACGAGCATCTTTTCAT...TTTTGCAGTCTGTGATTGCTTCTGTAAATCAGTTACCAACCTTTCGGTATTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 |
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| CDS CCA 90 bp | CCAATGAAGAAGAGTACCACCCCGCGGATCACCACGTTCACACTCTaGCTGGTGACAGAGGAAATGTATGGGCCACACTTTTTAGGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: PMKKSTTPRITTFTL*LVTEEMYGPHFLGR Trigger: TCGGCCTAAAAAGTGTGGCCCATACATTTCCTCTGTCACCAGCCAGAGTGTGAACGTGGTGATCCGCGGGGTGGTACTCTTCTTCATTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000159125.2 ENSMUST00000160688.2 ENSMUST00000160968.8 ENSMUST00000162582.2 ENSMUST00000162790.2 |
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| CDS TCA 90 bp | AGGGAAAACTGGAAGTTGTTGTCGAAGTCTACTTTAGCACTGGCGTaGTTTATACCCACGAACACCGCCACGCAGCGCATGACACTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RENWKLLSKSTLALA*FIPTNTATQRMTLD Trigger: GTCCAGTGTCATGCGCTGCGTGGCGGTGTTCGTGGGTATAAATCACGCCAGTGCTAAAGTAGACTTCGACAACAACTTCCAGTTTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000162790.2 |
||
| CDS TCA 90 bp | TCTGAATCTGAAGCAAGTTCAACACTAATGCCAGGAACACTCCAATaGAGAAGAGTACCACCCCGCGGATCACCACGTTCACACTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SESEASSTLMPGTLQ*RRVPPRGSPRSHSG Trigger: GCCAGAGTGTGAACGTGGTGATCCGCGGGGTGGTACTCTTCTTCATTGGAGTGTTCCTGGCATTAGTGTTGAACTTGCTTCAGATTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000159125.2 ENSMUST00000160688.2 ENSMUST00000160968.8 ENSMUST00000162582.2 ENSMUST00000162790.2 |
||
| CDS-3UTR CAA 90 bp | GCAATCACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATTCATACATTGCCAGTaGACGGCCAATGTTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AITDCKNMCVTHTHTPHTFIHCQ*TANVSH Trigger: ATGGGAAACATTGGCCGTCAACTGGCAATGTATGAA...TGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTGATTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS-3UTR CAA 90 bp | CACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACTTCATACATTGCCAGTaGACGGCCAATGTTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HRLQKHVCHTHTHTTHIHFIHCQ*TANVSH Trigger: ATGGGAAACATTGGCCGTCAACTGGCAATGTATGAA...GTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS-3UTR CAA 90 bp | CAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAATTCATACATTGCCAGTaGACGGCCAATGTTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QTAKTCVSHTHTHHTHTQFIHCQ*TANVSH Trigger: ATGGGAAACATTGGCCGTCAACTGGCAATGTATGAA...TTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS-3UTR CAA 90 bp | CACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAGGGAAAACTGGAAGTaGTTGTCGAAGTCTACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: HRLQKHVCHTHTHTTHIHRENWK*LSKSTL Trigger: TAAAGTAGACTTCGACAACAACTTCCAGTTTTCCCT...GTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS-3UTR CAA 90 bp | GCAATCACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACACAAGGGAAAACTGGAAGTaGTTGTCGAAGTCTACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: AITDCKNMCVTHTHTPHTRENWK*LSKSTL Trigger: TAAAGTAGACTTCGACAACAACTTCCAGTTTTCCCT...TGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTGATTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS-3UTR CAA 90 bp | TGCAAAAACATGTGTGTCACACACACACACACACCACACACATACACAATCAAGTTCATACATTGCCAGTaGACGGCCAATGTTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: CKNMCVTHTHTPHTYTIKFIHCQ*TANVSH Trigger: ATGGGAAACATTGGCCGTCAACTGGCAATGTATGAA...CTTGATTGTGTATGTGTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS TCA 90 bp | CTGGAGATGTGTATTGATAAACACCATTGTAGACTAACAGTTGGGTaGCAACGGTTGCTAAGAAAGCAATTCCAACACCAAGGCCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LEMCIDKHHCRLTVG*QRLLRKQFQHQGQN Trigger: GTTTTGGCCTTGGTGTTGGAATTGCTTTCTTAGCAACCGTTGTCACCCAACTGTTAGTCTACAATGGTGTTTATCAATACACATCTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGCAATCACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACAAGGGAAAACTGGAAGTaGTTGTCGAAGTCTACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RSNHRLQKHVCHTHTHTTRENWK*LSKSTL Trigger: TAAAGTAGACTTCGACAACAACTTCCAGTTTTCCCT...TGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTGATTGCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCAATCACAGACTGCAAAAACATGTGTGTCACACACACACACACACCACACATCTGGAGATGTGTATaGATAAACACCATTGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: EAITDCKNMCVTHTHTPHIWRCV*INTIVD Trigger: GTCTACAATGGTGTTTATCAATACACATCTCCAGAT...GTGTGGTGTGTGTGTGTGTGTGACACACATGTTTTTGCAGTCTGTGATTGCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS TCA 90 bp | TCAGCAATAACTTTGCATTCATACAGGCAGATGAAAAGATGCTCGTaGTCACATCTGGTGGAAAAAGTGTCACGTTTCTCTGAATCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SAITLHSYRQMKRCS*SHLVEKVSRFSESE Trigger: TTCAGATTCAGAGAAACGTGACACTTTTTCCACCAGATGTGATCACGAGCATCTTTTCATCTGCCTGTATGAATGCAAAGTTATTGCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160688.2 |
||
| CDS-3UTR CAA 90 bp | TCAAATACCGAAAGGTTGGTAACTGATTTACAGAAGCAATCACAGACTGCAAAAAGGGAAAACTGGAAGTaGTTGTCGAAGTCTACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SNTERLVTDLQKQSQTAKRENWK*LSKSTL Trigger: TAAAGTAGACTTCGACAACAACTTCCAGTTTTCCCT...TTTTGCAGTCTGTGATTGCTTCTGTAAATCAGTTACCAACCTTTCGGTATTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
||
| CDS CCA 72 bp | AAGAGTACCACCCCGCGGATCACCACGTTCACACTCTaGCTGGTGACAGAGGAAATGTATGGGCCACACTTT | + |
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Preference number: 6 (lower is better) Translates to: KSTTPRITTFTL*LVTEEMYGPHF Trigger: AAAGTGTGGCCCATACATTTCCTCTGTCACCAGCCAGAGTGTGAACGTGGTGATCCGCGGGGTGGTACTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000159125.2 ENSMUST00000160688.2 ENSMUST00000160968.8 ENSMUST00000161818.2 ENSMUST00000162582.2 ENSMUST00000162790.2 |
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| CDS TCA 72 bp | TGGAAGTTGTTGTCGAAGTCTACTTTAGCACTGGCGTaGTTTATACCCACGAACACCGCCACGCAGCGCATG | + |
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Preference number: 6 (lower is better) Translates to: WKLLSKSTLALA*FIPTNTATQRM Trigger: CATGCGCTGCGTGGCGGTGTTCGTGGGTATAAATCACGCCAGTGCTAAAGTAGACTTCGACAACAACTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000162790.2 |
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| CDS TCA 72 bp | AAGTCCACCACAGTCCTACTGACAGTGCAGCCAGTGTaGGGGAAAACTGGAAGTTGTTGTCGAAGTCTACTT | + |
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Preference number: 6 (lower is better) Translates to: KSTTVLLTVQPV*GKTGSCCRSLL Trigger: AAGTAGACTTCGACAACAACTTCCAGTTTTCCCTCACACTGGCTGCACTGTCAGTAGGACTGTGGTGGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
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| CDS TCA 72 bp | ACTTTGCATTCATACAGGCAGATGAAAAGATGCTCGTaGTCACATCTGGTGGAAAAAGTGTCACGTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: TLHSYRQMKRCS*SHLVEKVSRFS Trigger: AGAGAAACGTGACACTTTTTCCACCAGATGTGATCACGAGCATCTTTTCATCTGCCTGTATGAATGCAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160688.2 |
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| CDS TCA 72 bp | TGTATTGATAAACACCATTGTAGACTAACAGTTGGGTaGCAACGGTTGCTAAGAAAGCAATTCCAACACCAA | + |
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Preference number: 6 (lower is better) Translates to: CIDKHHCRLTVG*QRLLRKQFQHQ Trigger: TTGGTGTTGGAATTGCTTTCTTAGCAACCGTTGTCACCCAACTGTTAGTCTACAATGGTGTTTATCAATACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003818.14 ENSMUST00000071064.13 ENSMUST00000159085.8 ENSMUST00000160968.8 ENSMUST00000186915.2 |
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