Pregenerated sensors for INSC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048782Ensembl transcript IDs: ENSMUST00000117543.3, ENSMUST00000136645.8, ENSMUST00000151464.2, ENSMUST00000161800.2, ENSMUST00000169913.8, ENSMUST00000206274.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACACGGGCCCAGCGGTCCTaGGCCAGCTTCTGCCCGATC | + |
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Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTRAQRS*ASFCPI Trigger: GATCGGGCAGAAGCTGGCCCAGGACCGCTGGGCCCG...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACAAGCCGAACGGCCTCCTaGGCCACATCTGGGTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTSRTAS*ATSGSR Trigger: CCGAGACCCAGATGTGGCCCAGGAGGCCGTTCGGCT...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR TCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACAGCCAGCTCCAGTAGCTaGCCAAAGTGCTCGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTASSSS*PKCSPS Trigger: GCTGGGCGAGCACTTTGGTCAGCTACTGGAGCTGGC...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR TCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACACCTGCACTTCCCGTGTaGGGGCCAGCTCCAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTPALPV*GPAPVA Trigger: AGCTACTGGAGCTGGCCCTCACACGGGAAGTGCAGG...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACATGTGGGGAGGTAACCTaGGCTACCACGGCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTCGEVT*ATTAAA Trigger: GGCTGCAGCCGTGGTAGCCCAGGTTACCTCCCCACA...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR TCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACATGGTGCTGTACTCGCTaGCCATGGAGCGTGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTWCCTR*PWSVHG Trigger: GCCATGCACGCTCCATGGTCAGCGAGTACAGCACCA...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR TCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACATGGAAGTCAGAGTCCTaGAGGCCTTCCGGGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTWKSES*RPSGQT Trigger: GGTCTGCCCGGAAGGCCTTCAGGACTCTGACTTCCA...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACATCCTGGGCCAGCTTCTaGCCGATCCTTCGAAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTSWASF*PILRSS Trigger: CGAGCTTCGAAGGATCGGGCAGAAGCTGGCCCAGGA...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACAGCTGACCATGGAGCGTaGATGGCACGTCAGACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTADHGA*MARQTH Trigger: GTGCGTCTGACGTGCCATGCACGCTCCATGGTCAGC...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACACACCGGAAGCTGTCCTaGCGGCAGACCTTGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTHRKLS*RQTLKR Trigger: CCTCTTCAAGGTCTGCCGGCAGGACAGCTTCCGGTG...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACAAGAGGAGCCCCCTCCTaGGTCAGGCCGAACAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTRGAPS*VRPNRF Trigger: GAATCTGTTCGGCCTGACCCAGGAGGGGGCTCCTCT...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACAAGTGTGCGGAGTGCCTaGGGGTACAAGCACCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTSVRSA*GYKHRK Trigger: CTTCCGGTGCTTGTACCCCCAGGCACTCCGCACACT...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACATCCACCAGCCGAGGCTaGACCAGCTGCTGGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTSTSRG*TSCWKS Trigger: TGACTTCCAGCAGCTGGTCCAGCCTCGGCTGGTGGA...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR TCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACATCCTCCATCCAGCGCTaGACCGAGTCTACCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTSSIQR*TESTCM Trigger: CATGCAGGTAGACTCGGTTCAGCGCTGGATGGAGGA...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR TCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACACTGGCCCATTTCCTGTaGGGCTGTCCTGCTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTLAHFL*GCPADG Trigger: ACCATCAGCAGGACAGCCTCACAGGAAATGGGCCAG...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACAACCATGGAGCGTGCATaGCACGTCAGACGCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTTMERA*HVRRTL Trigger: GAGTGTGCGTCTGACGTGCCATGCACGCTCCATGGT...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACACAGGCTGATGGGCTTTaGCTGCAAGACGCACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTQADGL*LQDAHA Trigger: TGCATGTGCGTCTTGCAGGCAAAGCCCATCAGCCTG...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACATGCTCATTTTCCACCTaGAGGCACCTCTCCGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTCSFST*RHLSVT Trigger: GGTCACGGAGAGGTGCCTCCAGGTGGAAAATGAGCA...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACAGGTGAAGGACAGATGTaGGGAGGTAACCTGGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTGEGQM*GGNLGY Trigger: GTAGCCCAGGTTACCTCCCCACATCTGTCCTTCACC...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACAAGGTGTCCCAGACCTTaGCTTCTCAGACAGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTRCPRP*LLRQHA Trigger: GGCATGCTGTCTGAGAAGCCAAGGTCTGGGACACCT...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR TCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACACACCGTTCTCCTGAATaGTGTCAGAGCCACACTGCT | + |
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Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTHRSPE*CQSHTA Trigger: AGCAGTGTGGCTCTGACATCATTCAGGAGAACGGTG...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACACTGATGGGCTTTGCCTaGAAGACGCACATGCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTLMGFA*KTHMHS Trigger: TGAGTGCATGTGCGTCTTGCAGGCAAAGCCCATCAG...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACACTAGTGGCCTCCGAGTaGCTCTCATCAGTCAAGATG | + |
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Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTLVASE*LSSVKM Trigger: CATCTTGACTGATGAGAGCCACTCGGAGGCCACTAG...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACAAAGCTAGTGAGGTGCTaGGTGAAGGACAGATGTGGG | + |
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Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTKLVRC*VKDRCG Trigger: CCCACATCTGTCCTTCACCCAGCACCTCACTAGCTT...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTCGCACACTCATGCTGTaGACACGGGCCCAGCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSRTLML*TRAQRS Trigger: GGACCGCTGGGCCCGTGTGCACAGCATGAGTGTGCG...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTGGCCAGTGTGCGGAGTaGCTGGGGGTACAAGCACCG | + |
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Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSGQCAE*LGVQAP Trigger: CGGTGCTTGTACCCCCAGGCACTCCGCACACTGGCC...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACAAGGAAGCTAGTGAGGTaGTGGGTGAAGGACAGATGT | + |
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Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTRKLVR*WVKDRC Trigger: ACATCTGTCCTTCACCCAGCACCTCACTAGCTTCCT...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTGGAACGGAATCCAGGTaGCGGCCTCCAGGCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSGTESR*RPPGSA Trigger: GGCACTGCCTGGAGGCCGCCACCTGGATTCCGTTCC...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTAGCCGAACGGCCTCCTaGGCCACATCTGGGTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSSRTAS*ATSGSR Trigger: CCGAGACCCAGATGTGGCCCAGGAGGCCGTTCGGCT...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR TCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACACACGCAGGCCTTCATTaGCTTCAGAACATGCTCATT | + |
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Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTHAGLH*LQNMLI Trigger: AATGAGCATGTTCTGAAGTCAATGAAGGCCTGCGTG...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR TCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTGCCAGCTCCAGTAGCTaGCCAAAGTGCTCGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSASSSS*PKCSPS Trigger: GCTGGGCGAGCACTTTGGTCAGCTACTGGAGCTGGC...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR TCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTCCTGCACTTCCCGTGTaGGGGCCAGCTCCAGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSPALPV*GPAPVA Trigger: AGCTACTGGAGCTGGCCCTCACACGGGAAGTGCAGG...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTCTGGGCTACCACGGCTaGAGCCTCAGCTCTAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSLGYHG*SLSSSG Trigger: GCCACTAGAGCTGAGGCTGCAGCCGTGGTAGCCCAG...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACAATGTCAGAGCCACACTaGTCCAGCACAGACATGTTT | + |
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Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTMSEPH*SSTDMF Trigger: AAACATGTCTGTGCTGGAGCAGTGTGGCTCTGACAT...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACAGTCACTGCAGCTTTCTaGTGTACTCTTTCACAGGCT | + |
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Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTVTAAF*CTLSQA Trigger: AGCCTGTGAAAGAGTACAGCAGAAAGCTGCAGTGAC...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR TCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTTGGTGCTGTACTCGCTaGCCATGGAGCGTGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSWCCTR*PWSVHG Trigger: GCCATGCACGCTCCATGGTCAGCGAGTACAGCACCA...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR TCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTTGGAAGTCAGAGTCCTaGAGGCCTTCCGGGCAGACC | + |
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Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSWKSES*RPSGQT Trigger: GGTCTGCCCGGAAGGCCTTCAGGACTCTGACTTCCA...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTGCTGACCATGGAGCGTaGATGGCACGTCAGACGCAC | + |
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Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSADHGA*MARQTH Trigger: GTGCGTCTGACGTGCCATGCACGCTCCATGGTCAGC...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTCACCGGAAGCTGTCCTaGCGGCAGACCTTGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSHRKLS*RQTLKR Trigger: CCTCTTCAAGGTCTGCCGGCAGGACAGCTTCCGGTG...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTAGAGGAGCCCCCTCCTaGGTCAGGCCGAACAGATTC | + |
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Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSRGAPS*VRPNRF Trigger: GAATCTGTTCGGCCTGACCCAGGAGGGGGCTCCTCT...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTAGTGTGCGGAGTGCCTaGGGGTACAAGCACCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSSVRSA*GYKHRK Trigger: CTTCCGGTGCTTGTACCCCCAGGCACTCCGCACACT...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTTCCACCAGCCGAGGCTaGACCAGCTGCTGGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSSTSRG*TSCWKS Trigger: TGACTTCCAGCAGCTGGTCCAGCCTCGGCTGGTGGA...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR TCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTTCCTCCATCCAGCGCTaGACCGAGTCTACCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSSSIQR*TESTCM Trigger: CATGCAGGTAGACTCGGTTCAGCGCTGGATGGAGGA...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR TCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTCAGAGCATTTCTCCATaGGCAGCTTCTCCGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSQSISP*AASPPG Trigger: GCCAGGCGGAGAAGCTGCTCATGGAGAAATGCTCTG...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACAATTGACTTCAGAACATaGTCATTTTCCACCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EQYEGESPVTTCHVSLDTIDFRT*SFSTWR Trigger: CCTCCAGGTGGAAAATGAGCATGTTCTGAAGTCAAT...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTGGGGTGTCCACTCTCTaGTTGTCACCACAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSGVSTL*LSPQAS Trigger: GGAAGCCTGTGGTGACAAGCAGAGAGTGGACACCCC...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTACCATGGAGCGTGCATaGCACGTCAGACGCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSTMERA*HVRRTL Trigger: GAGTGTGCGTCTGACGTGCCATGCACGCTCCATGGT...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTCAGGCTGATGGGCTTTaGCTGCAAGACGCACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSQADGL*LQDAHA Trigger: TGCATGTGCGTCTTGCAGGCAAAGCCCATCAGCCTG...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTGGTGAAGGACAGATGTaGGGAGGTAACCTGGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSGEGQM*GGNLGY Trigger: GTAGCCCAGGTTACCTCCCCACATCTGTCCTTCACC...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR TCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTACTCACACTCGGTCATaGGCTTCAGATCCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSTHTRS*ASDPPS Trigger: GGATGGAGGATCTGAAGCTCATGACCGAGTGTGAGT...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTAGGAAGCTAGTGAGGTaGTGGGTGAAGGACAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSRKLVR*WVKDRC Trigger: ACATCTGTCCTTCACCCAGCACCTCACTAGCTTCCT...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR TCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTCACGCAGGCCTTCATTaGCTTCAGAACATGCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSHAGLH*LQNMLI Trigger: AATGAGCATGTTCTGAAGTCAATGAAGGCCTGCGTG...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTATGTCAGAGCCACACTaGTCCAGCACAGACATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSMSEPH*SSTDMF Trigger: AAACATGTCTGTGCTGGAGCAGTGTGGCTCTGACAT...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR GCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTGTCACTGCAGCTTTCTaGTGTACTCTTTCACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSVTAAF*CTLSQA Trigger: AGCCTGTGAAAGAGTACAGCAGAAAGCTGCAGTGAC...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTACATGTTTGCCAAGATaGTCACAATCTGGTCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSTCLPR*SQSGPE Trigger: CTCGGGACCAGATTGTGACCATCTTGGCAAACATGT...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
||
| CDS-3UTR GCA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTAACTCTCCTCCATATTaGTACACAGTAAGAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KLHINKELKRASVVSAHSNSPPY*YTVRRN Trigger: ATTCCTTCTTACTGTGTAGCAATATGGAGGAGAGTT...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS TCA 90 bp | GAATCCACCAGCCGAGGCTGGACCAGCTGCTGGAAGTCAGAGTCCTaGAGGCCTTCCGGGCAGACCCCGGCCAACCGACGCAGGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ESTSRGWTSCWKSES*RPSGQTPANRRRAA Trigger: GGCTGCCCTGCGTCGGTTGGCCGGGGTCTGCCCGGAAGGCCTTCAGGACTCTGACTTCCAGCAGCTGGTCCAGCCTCGGCTGGTGGATTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS CCA 90 bp | CAGGCGAGACATACAGCTGAGCCGAACGGCCTCCTGGGCCACATCTaGGTCTCGGCAGAGGCGGGCCAGGGTCACTGCAGCTTTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QARHTAEPNGLLGHI*VSAEAGQGHCSFLL Trigger: CAGCAGAAAGCTGCAGTGACCCTGGCCCGCCTCTGCCGAGACCCAGATGTGGCCCAGGAGGCCGTTCGGCTCAGCTGTATGTCTCGCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS GCA 90 bp | ACACTCATGCTGTGCACACGGGCCCAGCGGTCCTGGGCCAGCTTCTaGCCGATCCTTCGAAGCTCGGTGCTGATGACCCAGCCCCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLMLCTRAQRSWASF*PILRSSVLMTQPRF Trigger: GAAACGGGGCTGGGTCATCAGCACCGAGCTTCGAAGGATCGGGCAGAAGCTGGCCCAGGACCGCTGGGCCCGTGTGCACAGCATGAGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117543.3 ENSMUST00000136645.8 ENSMUST00000169913.8 |
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| CDS GCA 90 bp | CTGACCATGGAGCGTGCATGGCACGTCAGACGCACACTCATGCTGTaGACACGGGCCCAGCGGTCCTGGGCCAGCTTCTGCCCGATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LTMERAWHVRRTLML*TRAQRSWASFCPIL Trigger: AAGGATCGGGCAGAAGCTGGCCCAGGACCGCTGGGCCCGTGTGCACAGCATGAGTGTGCGTCTGACGTGCCATGCACGCTCCATGGTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117543.3 ENSMUST00000136645.8 ENSMUST00000169913.8 |
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| CDS CCA 90 bp | CACGTCAGACGCACACTCATGCTGTGCACACGGGCCCAGCGGTCCTaGGCCAGCTTCTGCCCGATCCTTCGAAGCTCGGTGCTGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: HVRRTLMLCTRAQRS*ASFCPILRSSVLMT Trigger: GGTCATCAGCACCGAGCTTCGAAGGATCGGGCAGAAGCTGGCCCAGGACCGCTGGGCCCGTGTGCACAGCATGAGTGTGCGTCTGACGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117543.3 ENSMUST00000136645.8 ENSMUST00000169913.8 |
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| CDS CCA 90 bp | CAGAGCTCAATCAGGCGAGACATACAGCTGAGCCGAACGGCCTCCTaGGCCACATCTGGGTCTCGGCAGAGGCGGGCCAGGGTCACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QSSIRRDIQLSRTAS*ATSGSRQRRARVTA Trigger: TGCAGTGACCCTGGCCCGCCTCTGCCGAGACCCAGATGTGGCCCAGGAGGCCGTTCGGCTCAGCTGTATGTCTCGCCTGATTGAGCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS GCA 90 bp | GCCAGTGTGCGGAGTGCCTGGGGGTACAAGCACCGGAAGCTGTCCTaGCGGCAGACCTTGAAGAGGGCTACAACCCCACCTTCCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASVRSAWGYKHRKLS*RQTLKRATTPPSLA Trigger: AGCCAAGGAAGGTGGGGTTGTAGCCCTCTTCAAGGTCTGCCGGCAGGACAGCTTCCGGTGCTTGTACCCCCAGGCACTCCGCACACTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS CCA 90 bp | GCTGTCCTGCTGATGGTGCTGTACTCGCTGACCATGGAGCGTGCATaGCACGTCAGACGCACACTCATGCTGTGCACACGGGCCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AVLLMVLYSLTMERA*HVRRTLMLCTRAQR Trigger: CCGCTGGGCCCGTGTGCACAGCATGAGTGTGCGTCTGACGTGCCATGCACGCTCCATGGTCAGCGAGTACAGCACCATCAGCAGGACAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117543.3 ENSMUST00000136645.8 ENSMUST00000169913.8 |
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| CDS TCA 90 bp | CTCACAAGTGCCTGCACTTCCCGTGTGAGGGCCAGCTCCAGTAGCTaGCCAAAGTGCTCGCCCAGCAGGCTCAGGGTCTCACTCACGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LTSACTSRVRASSSS*PKCSPSRLRVSLTQ Trigger: CTGCGTGAGTGAGACCCTGAGCCTGCTGGGCGAGCACTTTGGTCAGCTACTGGAGCTGGCCCTCACACGGGAAGTGCAGGCACTTGTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 ENSMUST00000206274.2 |
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| CDS GCA 90 bp | TCCAGGTGGCGGCCTCCAGGCAGTGCCATCATGTTAATCCCAATCTaGAGCAATGCCTGCCCACAGCGGTCCGGACCAACACAGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRWRPPGSAIMLIPI*SNACPQRSGPTQHS Trigger: GCTGTGCTGTGTTGGTCCGGACCGCTGTGGGCAGGCATTGCTGCAGATTGGGATTAACATGATGGCACTGCCTGGAGGCCGCCACCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161800.2 |
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| CDS GCA 90 bp | ATGGACACCCTCTTCTACACAGCAGATAGAGGCCAGTGTGCGGAGTaGCTGGGGGTACAAGCACCGGAAGCTGTCCTGCCGGCAGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: MDTLFYTADRGQCAE*LGVQAPEAVLPADL Trigger: AAGGTCTGCCGGCAGGACAGCTTCCGGTGCTTGTACCCCCAGGCACTCCGCACACTGGCCTCTATCTGCTGTGTAGAAGAGGGTGTCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS GCA 90 bp | ACATCTGGGTCTCGGCAGAGGCGGGCCAGGGTCACTGCAGCTTTCTaGTGTACTCTTTCACAGGCTGCCACTTCAGCAGGTGTCCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TSGSRQRRARVTAAF*CTLSQAATSAGVPD Trigger: GTCTGGGACACCTGCTGAAGTGGCAGCCTGTGAAAGAGTACAGCAGAAAGCTGCAGTGACCCTGGCCCGCCTCTGCCGAGACCCAGATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS CCA 90 bp | ACACCCTCTTCTACACAGCAGATAGAGGCCAGTGTGCGGAGTGCCTaGGGGTACAAGCACCGGAAGCTGTCCTGCCGGCAGACCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TPSSTQQIEASVRSA*GYKHRKLSCRQTLK Trigger: CTTCAAGGTCTGCCGGCAGGACAGCTTCCGGTGCTTGTACCCCCAGGCACTCCGCACACTGGCCTCTATCTGCTGTGTAGAAGAGGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS GCA 90 bp | CTGCTCTTGCAGAGGAACGGAATCCAGGTGGCGGCCTCCAGGCAGTaGCATCATGTTAATCCCAATCTGCAGCAATGCCTGCCCACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LLLQRNGIQVAASRQ*HHVNPNLQQCLPTA Trigger: CGCTGTGGGCAGGCATTGCTGCAGATTGGGATTAACATGATGGCACTGCCTGGAGGCCGCCACCTGGATTCCGTTCCTCTGCAAGAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161800.2 |
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| CDS TCA 90 bp | GTGCTCGCCCAGCAGGCTCAGGGTCTCACTCACGCAGGCCTTCATTaGCTTCAGAACATGCTCATTTTCCACCTGGAGGCACCTCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VLAQQAQGLTHAGLH*LQNMLIFHLEAPLR Trigger: ACGGAGAGGTGCCTCCAGGTGGAAAATGAGCATGTTCTGAAGTCAATGAAGGCCTGCGTGAGTGAGACCCTGAGCCTGCTGGGCGAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS TCA 90 bp | GGTGATATTGGCGAGGGCCGCAGAGGCCAGCAGGAAGACTTCCCCTaGCGAGGCCTCTTGGCACAGTTTGATAAGGGCTGTCACAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: GDIGEGRRGQQEDFP*RGLLAQFDKGCHNL Trigger: GAGATTGTGACAGCCCTTATCAAACTGTGCCAAGAGGCCTCGTCAGGGGAAGTCTTCCTGCTGGCCTCTGCGGCCCTCGCCAATATCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS GCA 90 bp | AGGCTCAGGGTCTCACTCACGCAGGCCTTCATTGACTTCAGAACATaGTCATTTTCCACCTGGAGGCACCTCTCCGTGACCGCAGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLRVSLTQAFIDFRT*SFSTWRHLSVTAES Trigger: GCTCTCTGCGGTCACGGAGAGGTGCCTCCAGGTGGAAAATGAGCATGTTCTGAAGTCAATGAAGGCCTGCGTGAGTGAGACCCTGAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS GCA 90 bp | AGGGCTGTCACAATCTCCTCCATGTTCTCCAGGAAGCTAGTGAGGTaGTGGGTGAAGGACAGATGTGGGGAGGTAACCTGGGCTACCACG | + |
|
Preference number: 5 (lower is better) Translates to: RAVTISSMFSRKLVR*WVKDRCGEVTWATT Trigger: CGTGGTAGCCCAGGTTACCTCCCCACATCTGTCCTTCACCCAGCACCTCACTAGCTTCCTGGAGAACATGGAGGAGATTGTGACAGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS CCA 90 bp | CTGTACTCTTTCACAGGCTGCCACTTCAGCAGGTGTCCCAGACCTTaGCTTCTCAGACAGCATGCCCATGATGAGCTGGACACCGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LYSFTGCHFSRCPRP*LLRQHAHDELDTVL Trigger: GAGAACGGTGTCCAGCTCATCATGGGCATGCTGTCTGAGAAGCCAAGGTCTGGGACACCTGCTGAAGTGGCAGCCTGTGAAAGAGTACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS CCA 90 bp | TGCATGAAGTGTAGCCTCTGCTCTTGCAGAGGAACGGAATCCAGGTaGCGGCCTCCAGGCAGTGCCATCATGTTAATCCCAATCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CMKCSLCSCRGTESR*RPPGSAIMLIPICS Trigger: GCTGCAGATTGGGATTAACATGATGGCACTGCCTGGAGGCCGCCACCTGGATTCCGTTCCTCTGCAAGAGCAGAGGCTACACTTCATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161800.2 |
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| CDS-3UTR CAA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACATCGAAGAAGGTGATATaGGCGAGGGCCGCAGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EQYEGESPVTTCHVSLDTSKKVI*ARAAEA Trigger: GGCCTCTGCGGCCCTCGCCAATATCACCTTCTTCGA...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS TCA 90 bp | ATGCACTCACACTCGGTCATGAGCTTCAGATCCTCCATCCAGCGCTaGACCGAGTCTACCTGCATGAAGTGTAGCCTCTGCTCTTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: MHSHSVMSFRSSIQR*TESTCMKCSLCSCR Trigger: TCTGCAAGAGCAGAGGCTACACTTCATGCAGGTAGACTCGGTTCAGCGCTGGATGGAGGATCTGAAGCTCATGACCGAGTGTGAGTGCAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117543.3 ENSMUST00000136645.8 ENSMUST00000151464.2 ENSMUST00000169913.8 |
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| CDS TCA 90 bp | CATTCAACTGTAGAAGCATCTCACAGGCCATTTTGTCGAAGAAGGTaGTATTGGCGAGGGCCGCAGAGGCCAGCAGGAAGACTTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HSTVEASHRPFCRRR*YWRGPQRPAGRLPL Trigger: CAGGGGAAGTCTTCCTGCTGGCCTCTGCGGCCCTCGCCAATATCACCTTCTTCGACAAAATGGCCTGTGAGATGCTTCTACAGTTGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CAA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACAGTGTCCACTCTCTGCTaGTCACCACAGGCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EQYEGESPVTTCHVSLDTVSTLC*SPQASR Trigger: CCTGGAAGCCTGTGGTGACAAGCAGAGAGTGGACAC...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CAA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACACAGGTGTCCCAGACCTaGGCTTCTCAGACAGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: EQYEGESPVTTCHVSLDTQVSQT*ASQTAC Trigger: GCATGCTGTCTGAGAAGCCAAGGTCTGGGACACCTG...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS TCA 90 bp | GCCGAACAGATTCCCTGTGGTAGACTCCGTGATGTAGATATTGTCTaGGGTATCGATTTTTCTCACAAGTGCCTGCACTTCCCGTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: AEQIPCGRLRDVDIV*GIDFSHKCLHFPCE Trigger: CTCACACGGGAAGTGCAGGCACTTGTGAGAAAAATCGATACCTCAGACAATATCTACATCACGGAGTCTACCACAGGGAATCTGTTCGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 ENSMUST00000206274.2 |
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| CDS-3UTR CAA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACATCACGCAGGCCTTCATaGACTTCAGAACATGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: EQYEGESPVTTCHVSLDTSRRPS*TSEHAH Trigger: ATGAGCATGTTCTGAAGTCAATGAAGGCCTGCGTGA...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
||
| CDS-3UTR CAA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTTCCTGCCGGCAGACCTaGAAGAGGGCTACAACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KLHINKELKRASVVSAHSSCRQT*KRATTP Trigger: TGGGGTTGTAGCCCTCTTCAAGGTCTGCCGGCAGGA...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
||
| CDS-3UTR CAA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTGTGTCCACTCTCTGCTaGTCACCACAGGCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KLHINKELKRASVVSAHSVSTLC*SPQASR Trigger: CCTGGAAGCCTGTGGTGACAAGCAGAGAGTGGACAC...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CAA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTCAGGTGTCCCAGACCTaGGCTTCTCAGACAGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: KLHINKELKRASVVSAHSQVSQT*ASQTAC Trigger: GCATGCTGTCTGAGAAGCCAAGGTCTGGGACACCTG...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CAA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTACAACCCCACCTTCCTaGGCTATGATGCGGCACAGA | + |
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Preference number: 5 (lower is better) Translates to: KLHINKELKRASVVSAHSTTPPS*AMMRHR Trigger: TCTGTGCCGCATCATAGCCAAGGAAGGTGGGGTTGT...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CAA 90 bp | GAGCAGTATGAAGGGGAGTCACCTGTGACAACCTGTCATGTTAGCCTTGACACAAAACTCTCCTCCATATaGCTACACAGTAAGAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: EQYEGESPVTTCHVSLDTKLSSI*LHSKKE Trigger: TTCCTTCTTACTGTGTAGCAATATGGAGGAGAGTTT...TGTGTCAAGGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CAA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTCCAGGAGGACACGGATaGCATTCAACTGTAGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: KLHINKELKRASVVSAHSPGGHG*HSTVEA Trigger: TGCTTCTACAGTTGAATGCAATCCGTGTCCTCCTGG...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CAA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTTCACGCAGGCCTTCATaGACTTCAGAACATGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: KLHINKELKRASVVSAHSSRRPS*TSEHAH Trigger: ATGAGCATGTTCTGAAGTCAATGAAGGCCTGCGTGA...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CAA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTCCAGCACAGACATGTTaGCCAAGATGGTCACAATCT | + |
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Preference number: 5 (lower is better) Translates to: KLHINKELKRASVVSAHSPAQTC*PRWSQS Trigger: AGATTGTGACCATCTTGGCAAACATGTCTGTGCTGG...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS-3UTR CAA 90 bp | AAATTACATATAAATAAGGAGCTGAAGAGAGCTAGCGTGGTAAGTGCACACAGTAAACTCTCCTCCATATaGCTACACAGTAAGAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: KLHINKELKRASVVSAHSKLSSI*LHSKKE Trigger: TTCCTTCTTACTGTGTAGCAATATGGAGGAGAGTTT...ACTGTGTGCACTTACCACGCTAGCTCTCTTCAGCTCCTTATTTATATGTAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS TCA 72 bp | AGCCGAGGCTGGACCAGCTGCTGGAAGTCAGAGTCCTaGAGGCCTTCCGGGCAGACCCCGGCCAACCGACGC | + |
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Preference number: 6 (lower is better) Translates to: SRGWTSCWKSES*RPSGQTPANRR Trigger: GCGTCGGTTGGCCGGGGTCTGCCCGGAAGGCCTTCAGGACTCTGACTTCCAGCAGCTGGTCCAGCCTCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS CCA 72 bp | CATACAGCTGAGCCGAACGGCCTCCTGGGCCACATCTaGGTCTCGGCAGAGGCGGGCCAGGGTCACTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: HTAEPNGLLGHI*VSAEAGQGHCS Trigger: GCTGCAGTGACCCTGGCCCGCCTCTGCCGAGACCCAGATGTGGCCCAGGAGGCCGTTCGGCTCAGCTGTATG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS GCA 72 bp | CTGTGCACACGGGCCCAGCGGTCCTGGGCCAGCTTCTaGCCGATCCTTCGAAGCTCGGTGCTGATGACCCAG | + |
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Preference number: 6 (lower is better) Translates to: LCTRAQRSWASF*PILRSSVLMTQ Trigger: CTGGGTCATCAGCACCGAGCTTCGAAGGATCGGGCAGAAGCTGGCCCAGGACCGCTGGGCCCGTGTGCACAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117543.3 ENSMUST00000136645.8 ENSMUST00000169913.8 |
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| CDS GCA 72 bp | CCATGGAGCGTGCATGGCACGTCAGACGCACACTCATaGTGTGCACACGGGCCCAGCGGTCCTGGGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PWSVHGTSDAHS*CAHGPSGPGPA Trigger: AGCTGGCCCAGGACCGCTGGGCCCGTGTGCACAGCATGAGTGTGCGTCTGACGTGCCATGCACGCTCCATGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117543.3 ENSMUST00000136645.8 ENSMUST00000169913.8 |
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| CDS CCA 72 bp | ATCAGGCGAGACATACAGCTGAGCCGAACGGCCTCCTaGGCCACATCTGGGTCTCGGCAGAGGCGGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: IRRDIQLSRTAS*ATSGSRQRRAR Trigger: CCTGGCCCGCCTCTGCCGAGACCCAGATGTGGCCCAGGAGGCCGTTCGGCTCAGCTGTATGTCTCGCCTGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS TCA 72 bp | GCCTGCACTTCCCGTGTGAGGGCCAGCTCCAGTAGCTaGCCAAAGTGCTCGCCCAGCAGGCTCAGGGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: ACTSRVRASSSS*PKCSPSRLRVS Trigger: TGAGACCCTGAGCCTGCTGGGCGAGCACTTTGGTCAGCTACTGGAGCTGGCCCTCACACGGGAAGTGCAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 ENSMUST00000206274.2 |
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| CDS TCA 72 bp | GGGACCGGCAGAGCTCAATCAGGCGAGACATACAGCTaGGCCGAACGGCCTCCTGGGCCACATCTGGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: GTGRAQSGETYS*AERPPGPHLGL Trigger: GAGACCCAGATGTGGCCCAGGAGGCCGTTCGGCTCAGCTGTATGTCTCGCCTGATTGAGCTCTGCCGGTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS GCA 72 bp | CGGAGTGCCTGGGGGTACAAGCACCGGAAGCTGTCCTaGCGGCAGACCTTGAAGAGGGCTACAACCCCACCT | + |
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Preference number: 6 (lower is better) Translates to: RSAWGYKHRKLS*RQTLKRATTPP Trigger: AGGTGGGGTTGTAGCCCTCTTCAAGGTCTGCCGGCAGGACAGCTTCCGGTGCTTGTACCCCCAGGCACTCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS TCA 72 bp | GGCGAGGGCCGCAGAGGCCAGCAGGAAGACTTCCCCTaGCGAGGCCTCTTGGCACAGTTTGATAAGGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GEGRRGQQEDFP*RGLLAQFDKGC Trigger: ACAGCCCTTATCAAACTGTGCCAAGAGGCCTCGTCAGGGGAAGTCTTCCTGCTGGCCTCTGCGGCCCTCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS TCA 72 bp | TGTCAGCCAAGCACAGGATACCGTCCACCTTGGCTATaGTGCGGCACAGAGGAGCCCCCTCCTGGGTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: CQPSTGYRPPWL*CGTEEPPPGSG Trigger: GCCTGACCCAGGAGGGGGCTCCTCTGTGCCGCATCATAGCCAAGGTGGACGGTATCCTGTGCTTGGCTGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206274.2 |
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| CDS CCA 72 bp | TCTACACAGCAGATAGAGGCCAGTGTGCGGAGTGCCTaGGGGTACAAGCACCGGAAGCTGTCCTGCCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: STQQIEASVRSA*GYKHRKLSCRQ Trigger: CTGCCGGCAGGACAGCTTCCGGTGCTTGTACCCCCAGGCACTCCGCACACTGGCCTCTATCTGCTGTGTAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS CCA 72 bp | AGGTGCTGGGTGAAGGACAGATGTGGGGAGGTAACCTaGGCTACCACGGCTGCAGCCTCAGCTCTAGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RCWVKDRCGEVT*ATTAAASALVA Trigger: GGCCACTAGAGCTGAGGCTGCAGCCGTGGTAGCCCAGGTTACCTCCCCACATCTGTCCTTCACCCAGCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 ENSMUST00000206274.2 |
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| CDS CAA 90 bp | AGTGCCTGGGGGTACAAGCACCGGAAGCTGTCCTGCCGGCAGACCTaGAAGAGGGCTACAACCCCACCTTCCTTGGCTATGATGCGGCAC | + |
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Preference number: 6 (lower is better) Translates to: SAWGYKHRKLSCRQT*KRATTPPSLAMMRH Trigger: GTGCCGCATCATAGCCAAGGAAGGTGGGGTTGTAGCCCTCTTCAAGGTCTGCCGGCAGGACAGCTTCCGGTGCTTGTACCCCCAGGCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS GCA 72 bp | CTCTTCTACACAGCAGATAGAGGCCAGTGTGCGGAGTaGCTGGGGGTACAAGCACCGGAAGCTGTCCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: LFYTADRGQCAE*LGVQAPEAVLP Trigger: CGGCAGGACAGCTTCCGGTGCTTGTACCCCCAGGCACTCCGCACACTGGCCTCTATCTGCTGTGTAGAAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS CCA 72 bp | TCCTTGGCTATGATGCGGCACAGAGGAGCCCCCTCCTaGGTCAGGCCGAACAGATTCCCTGTGGTAGACTCC | + |
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Preference number: 6 (lower is better) Translates to: SLAMMRHRGAPS*VRPNRFPVVDS Trigger: GGAGTCTACCACAGGGAATCTGTTCGGCCTGACCCAGGAGGGGGCTCCTCTGTGCCGCATCATAGCCAAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS CCA 72 bp | ACCTTGGCTATGATGCGGCACAGAGGAGCCCCCTCCTaGGTCAGGCCGAACAGATTCCCTGTGGTAGACTCC | + |
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Preference number: 6 (lower is better) Translates to: TLAMMRHRGAPS*VRPNRFPVVDS Trigger: GGAGTCTACCACAGGGAATCTGTTCGGCCTGACCCAGGAGGGGGCTCCTCTGTGCCGCATCATAGCCAAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206274.2 |
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| CDS GCA 72 bp | CCTGGACCAGGACCACCTGCTAGGATAAGGTCACCTTaGGTGTCTTCCTCCAGGCTGATGGGCTTTGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PGPGPPARIRSP*VSSSRLMGFAC Trigger: GCAGGCAAAGCCCATCAGCCTGGAGGAAGACACGCAAGGTGACCTTATCCTAGCAGGTGGTCCTGGTCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117543.3 ENSMUST00000136645.8 ENSMUST00000169913.8 |
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| CDS GCA 72 bp | CCTGCTGATGGTGCTGTACTCGCTGACCATGGAGCGTaGATGGCACGTCAGACGCACACTCATGCTGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: PADGAVLADHGA*MARQTHTHAVH Trigger: GTGCACAGCATGAGTGTGCGTCTGACGTGCCATGCACGCTCCATGGTCAGCGAGTACAGCACCATCAGCAGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117543.3 ENSMUST00000136645.8 ENSMUST00000169913.8 |
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| CDS GCA 72 bp | TCTCGGCAGAGGCGGGCCAGGGTCACTGCAGCTTTCTaGTGTACTCTTTCACAGGCTGCCACTTCAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: SRQRRARVTAAF*CTLSQAATSAG Trigger: ACCTGCTGAAGTGGCAGCCTGTGAAAGAGTACAGCAGAAAGCTGCAGTGACCCTGGCCCGCCTCTGCCGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS GCA 72 bp | CGGCCTCCAGGCAGTGCCATCATGTTAATCCCAATCTaGAGCAATGCCTGCCCACAGCGGTCCGGACCAACA | + |
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Preference number: 6 (lower is better) Translates to: RPPGSAIMLIPI*SNACPQRSGPT Trigger: TGTTGGTCCGGACCGCTGTGGGCAGGCATTGCTGCAGATTGGGATTAACATGATGGCACTGCCTGGAGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161800.2 |
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| CDS CCA 72 bp | CTGATGGTGCTGTACTCGCTGACCATGGAGCGTGCATaGCACGTCAGACGCACACTCATGCTGTGCACACGG | + |
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Preference number: 6 (lower is better) Translates to: LMVLYSLTMERA*HVRRTLMLCTR Trigger: CCGTGTGCACAGCATGAGTGTGCGTCTGACGTGCCATGCACGCTCCATGGTCAGCGAGTACAGCACCATCAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117543.3 ENSMUST00000136645.8 ENSMUST00000169913.8 |
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| CDS CAA 72 bp | GGGTACAAGCACCGGAAGCTGTCCTGCCGGCAGACCTaGAAGAGGGCTACAACCCCACCTTCCTTGGCTATG | + |
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Preference number: 6 (lower is better) Translates to: GYKHRKLSCRQT*KRATTPPSLAM Trigger: CATAGCCAAGGAAGGTGGGGTTGTAGCCCTCTTCAAGGTCTGCCGGCAGGACAGCTTCCGGTGCTTGTACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS GCA 72 bp | GTCACCTTGCGTGTCTTCCTCCAGGCTGATGGGCTTTaGCTGCAAGACGCACATGCACTCACACTCGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: VTLRVFLQADGL*LQDAHALTLGH Trigger: ATGACCGAGTGTGAGTGCATGTGCGTCTTGCAGGCAAAGCCCATCAGCCTGGAGGAAGACACGCAAGGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117543.3 ENSMUST00000136645.8 ENSMUST00000169913.8 |
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| CDS GCA 72 bp | AGTGCCATCATGTTAATCCCAATCTGCAGCAATGCCTaGCCACAGCGGTCCGGACCAACACAGCACAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SAIMLIPICSNA*PQRSGPTQHSL Trigger: GAGGCTGTGCTGTGTTGGTCCGGACCGCTGTGGGCAGGCATTGCTGCAGATTGGGATTAACATGATGGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161800.2 |
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| CDS GCA 72 bp | AGGCAGTGCCATCATGTTAATCCCAATCTGCAGCAATaGCTGCCCACAGCGGTCCGGACCAACACAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: RQCHHVNPNLQQ*LPTAVRTNTAQ Trigger: CTGTGCTGTGTTGGTCCGGACCGCTGTGGGCAGGCATTGCTGCAGATTGGGATTAACATGATGGCACTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161800.2 |
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| CDS CCA 72 bp | GAGGCCAGCAGGAAGACTTCCCCTGACGAGGCCTCTTaGCACAGTTTGATAAGGGCTGTCACAATCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: EASRKTSPDEAS*HSLIRAVTISS Trigger: GGAGGAGATTGTGACAGCCCTTATCAAACTGTGCCAAGAGGCCTCGTCAGGGGAAGTCTTCCTGCTGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS CCA 72 bp | TGTAGCCTCTGCTCTTGCAGAGGAACGGAATCCAGGTaGCGGCCTCCAGGCAGTGCCATCATGTTAATCCCA | + |
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Preference number: 6 (lower is better) Translates to: CSLCSCRGTESR*RPPGSAIMLIP Trigger: TGGGATTAACATGATGGCACTGCCTGGAGGCCGCCACCTGGATTCCGTTCCTCTGCAAGAGCAGAGGCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161800.2 |
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| CDS TCA 72 bp | CACTCGGTCATGAGCTTCAGATCCTCCATCCAGCGCTaGACCGAGTCTACCTGCATGAAGTGTAGCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: HSVMSFRSSIQR*TESTCMKCSLC Trigger: GCAGAGGCTACACTTCATGCAGGTAGACTCGGTTCAGCGCTGGATGGAGGATCTGAAGCTCATGACCGAGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000117543.3 ENSMUST00000136645.8 ENSMUST00000151464.2 ENSMUST00000161800.2 ENSMUST00000169913.8 |
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| CDS CAA 90 bp | AACTGTAGAAGCATCTCACAGGCCATTTTGTCGAAGAAGGTGATATaGGCGAGGGCCGCAGAGGCCAGCAGGAAGACTTCCCCTGACGAG | + |
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Preference number: 6 (lower is better) Translates to: NCRSISQAILSKKVI*ARAAEASRKTSPDE Trigger: CTCGTCAGGGGAAGTCTTCCTGCTGGCCTCTGCGGCCCTCGCCAATATCACCTTCTTCGACAAAATGGCCTGTGAGATGCTTCTACAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS TCA 72 bp | GATCCTCCATCCAGCGCTGAACCGAGTCTACCTGCATaGAGTGTAGCCTCTGCTCTTGCAGAGGAACGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: DPPSSAEPSLPA*SVASALAEERN Trigger: ATTCCGTTCCTCTGCAAGAGCAGAGGCTACACTTCATGCAGGTAGACTCGGTTCAGCGCTGGATGGAGGATC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000117543.3 ENSMUST00000136645.8 ENSMUST00000151464.2 ENSMUST00000161800.2 ENSMUST00000169913.8 |
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| CDS TCA 72 bp | CAGCAGGCTCAGGGTCTCACTCACGCAGGCCTTCATTaGCTTCAGAACATGCTCATTTTCCACCTGGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QQAQGLTHAGLH*LQNMLIFHLEA Trigger: TGCCTCCAGGTGGAAAATGAGCATGTTCTGAAGTCAATGAAGGCCTGCGTGAGTGAGACCCTGAGCCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 ENSMUST00000206274.2 |
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| CDS TCA 72 bp | TATCGATTTTTCTCACAAGTGCCTGCACTTCCCGTGTaGGGGCCAGCTCCAGTAGCTGACCAAAGTGCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: YRFFSQVPALPV*GPAPVADQSAR Trigger: GCGAGCACTTTGGTCAGCTACTGGAGCTGGCCCTCACACGGGAAGTGCAGGCACTTGTGAGAAAAATCGATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 ENSMUST00000206274.2 |
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| CDS CCA 72 bp | GCCTTCATTGACTTCAGAACATGCTCATTTTCCACCTaGAGGCACCTCTCCGTGACCGCAGAGAGCTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AFIDFRTCSFST*RHLSVTAESSE Trigger: CTCTGAGCTCTCTGCGGTCACGGAGAGGTGCCTCCAGGTGGAAAATGAGCATGTTCTGAAGTCAATGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS CAA 90 bp | AGGACACGGATTGCATTCAACTGTAGAAGCATCTCACAGGCCATTTaGTCGAAGAAGGTGATATTGGCGAGGGCCGCAGAGGCCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RTRIAFNCRSISQAI*SKKVILARAAEASR Trigger: CCTGCTGGCCTCTGCGGCCCTCGCCAATATCACCTTCTTCGACAAAATGGCCTGTGAGATGCTTCTACAGTTGAATGCAATCCGTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS CAA 90 bp | TGTCCACTCTCTGCTTGTCACCACAGGCTTCCAGGAGGACACGGATaGCATTCAACTGTAGAAGCATCTCACAGGCCATTTTGTCGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: CPLSACHHRLPGGHG*HSTVEASHRPFCRR Trigger: TCTTCGACAAAATGGCCTGTGAGATGCTTCTACAGTTGAATGCAATCCGTGTCCTCCTGGAAGCCTGTGGTGACAAGCAGAGAGTGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 |
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| CDS TCA 72 bp | ATTCCCTGTGGTAGACTCCGTGATGTAGATATTGTCTaGGGTATCGATTTTTCTCACAAGTGCCTGCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: IPCGRLRDVDIV*GIDFSHKCLHF Trigger: GAAGTGCAGGCACTTGTGAGAAAAATCGATACCTCAGACAATATCTACATCACGGAGTCTACCACAGGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000117543.3 ENSMUST00000169913.8 ENSMUST00000206274.2 |
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