Pregenerated sensors for INS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000215Ensembl transcript IDs: ENSMUST00000000220.3, ENSMUST00000105930.8, ENSMUST00000105931.8, ENSMUST00000105932.2, ENSMUST00000105933.8, ENSMUST00000105934.8, ENSMUST00000125933.2, ENSMUST00000162317.2, ENSMUST00000210288.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTCTGAAGGTCACCTGCTCCCGGGCCTCCACCCAGCTCCAGTTGTaGCACTGCCAGGGAGGTTGTGTCAGAGCAGGCCAGGGCATCAGC | + |
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Preference number: 1 (lower is better) Translates to: GLKVTCSRASTQLQL*HCQGGCVRAGQGIS Trigger: GCTGATGCCCTGGCCTGCTCTGACACAACCTCCCTGGCAGTGGCACAACTGGAGCTGGGTGGAGGCCCGGGAGCAGGTGACCTTCAGACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| 3UTR GCA 90 bp | ACGCTTCTGCTGGGCCACCTCCAGTGCCAAGGTCTGAAGGTCACCTaGTCCCGGGCCTCCACCCAGCTCCAGTTGTGCCACTGCCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: TLLLGHLQCQGLKVT*SRASTQLQLCHCQG Trigger: TCCCTGGCAGTGGCACAACTGGAGCTGGGTGGAGGCCCGGGAGCAGGTGACCTTCAGACCTTGGCACTGGAGGTGGCCCAGCAGAAGCGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| 3UTR GCA 90 bp | AAGGTCACCTGCTCCCGGGCCTCCACCCAGCTCCAGTTGTGCCACTaGCAGGGAGGTTGTGTCAGAGCAGGCCAGGGCATCAGCAGCACA | + |
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Preference number: 1 (lower is better) Translates to: KVTCSRASTQLQLCH*QGGCVRAGQGISST Trigger: TGTGCTGCTGATGCCCTGGCCTGCTCTGACACAACCTCCCTGGCAGTGGCACAACTGGAGCTGGGTGGAGGCCCGGGAGCAGGTGACCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| 3UTR GCA 90 bp | GCAGCACTGATCTACAATGCCACGCTTCTGCTGGGCCACCTCCAGTaGCAAGGTCTGAAGGTCACCTGCTCCCGGGCCTCCACCCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: AALIYNATLLLGHLQ*QGLKVTCSRASTQL Trigger: GAGCTGGGTGGAGGCCCGGGAGCAGGTGACCTTCAGACCTTGGCACTGGAGGTGGCCCAGCAGAAGCGTGGCATTGTAGATCAGTGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| 3UTR GCA 90 bp | CCAGCTGGTAGAGGGAGCAGATGCTGGTGCAGCACTGATCTACAATaGCACGCTTCTGCTGGGCCACCTCCAGTGCCAAGGTCTGAAGGT | + |
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Preference number: 1 (lower is better) Translates to: PAGRGSRCWCSTDLQ*HASAGPPPVPRSEG Trigger: ACCTTCAGACCTTGGCACTGGAGGTGGCCCAGCAGAAGCGTGGCATTGTAGATCAGTGCTGCACCAGCATCTGCTCCCTCTACCAGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| 3UTR CCA 90 bp | GGGTCTAGTTGCAGTAGTTCTCCAGCTGGTAGAGGGAGCAGATGCTaGTGCAGCACTGATCTACAATGCCACGCTTCTGCTGGGCCACCT | + |
|
Preference number: 1 (lower is better) Translates to: GSSCSSSPAGRGSRC*CSTDLQCHASAGPP Trigger: AGGTGGCCCAGCAGAAGCGTGGCATTGTAGATCAGTGCTGCACCAGCATCTGCTCCCTCTACCAGCTGGAGAACTACTGCAACTAGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| 3UTR GCA 90 bp | TCTAGTTGCAGTAGTTCTCCAGCTGGTAGAGGGAGCAGATGCTGGTaGAGCACTGATCTACAATGCCACGCTTCTGCTGGGCCACCTCCA | + |
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Preference number: 1 (lower is better) Translates to: SSCSSSPAGRGSRCW*STDLQCHASAGPPP Trigger: TGGAGGTGGCCCAGCAGAAGCGTGGCATTGTAGATCAGTGCTGCACCAGCATCTGCTCCCTCTACCAGCTGGAGAACTACTGCAACTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| 3UTR GCA 90 bp | TTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTCTAGTTaGAGTAGTTCTCCAGCTGGTAGAGGGAGCAGATGCTGGTGCAGC | + |
|
Preference number: 1 (lower is better) Translates to: FYSLQRGRLGSGGSS*SSSPAGRGSRCWCS Trigger: GCTGCACCAGCATCTGCTCCCTCTACCAGCTGGAGAACTACTGCAACTAGACCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105930.8 ENSMUST00000105931.8 |
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| 3UTR CAA 90 bp | CAAGGTCTGAAGGTCACCTGCTCCCGGGCCTCCACCCAGCTCCAGTaGTGCCACTGCCAGGGAGGTTGTGTCAGAGCAGGCCAGGGCATC | + |
|
Preference number: 2 (lower is better) Translates to: QGLKVTCSRASTQLQ*CHCQGGCVRAGQGI Trigger: GATGCCCTGGCCTGCTCTGACACAACCTCCCTGGCAGTGGCACAACTGGAGCTGGGTGGAGGCCCGGGAGCAGGTGACCTTCAGACCTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGGGTAGGCTGGGTAGTGGTGGGTCTAGTTGCAGTAGTTCTCCAGCTGGTACTGGGCCACCTCCAGTaGCAAGGTCTGAAGGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: RGVGWVVVGLVAVVLQLVLGHLQ*QGLKVT Trigger: GGTGACCTTCAGACCTTGGCACTGGAGGTGGCCCAG...TACCAGCTGGAGAACTACTGCAACTAGACCCACCACTACCCAGCCTACCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| 3UTR GCA 72 bp | TGCTCCCGGGCCTCCACCCAGCTCCAGTTGTGCCACTaGCAGGGAGGTTGTGTCAGAGCAGGCCAGGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: CSRASTQLQLCH*QGGCVRAGQGI Trigger: GATGCCCTGGCCTGCTCTGACACAACCTCCCTGGCAGTGGCACAACTGGAGCTGGGTGGAGGCCCGGGAGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| 3UTR GCA 72 bp | CTGGGCCACCTCCAGTGCCAAGGTCTGAAGGTCACCTaGTCCCGGGCCTCCACCCAGCTCCAGTTGTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LGHLQCQGLKVT*SRASTQLQLCH Trigger: GTGGCACAACTGGAGCTGGGTGGAGGCCCGGGAGCAGGTGACCTTCAGACCTTGGCACTGGAGGTGGCCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| 3UTR-3UTR CAA 90 bp | GGGAGCAGATGCTGGTGCAGCACTGATCTACAATGCCACGCTTCTGCTGGGCCACCACTGCCAGGGAGGTaGTGTCAGAGCAGGCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: GSRCWCSTDLQCHASAGPPLPGR*CQSRPG Trigger: CCCTGGCCTGCTCTGACACAACCTCCCTGGCAGTGG...TGGCCCAGCAGAAGCGTGGCATTGTAGATCAGTGCTGCACCAGCATCTGCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| 3UTR GCA 72 bp | ATCTACAATGCCACGCTTCTGCTGGGCCACCTCCAGTaGCAAGGTCTGAAGGTCACCTGCTCCCGGGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: IYNATLLLGHLQ*QGLKVTCSRAS Trigger: GGAGGCCCGGGAGCAGGTGACCTTCAGACCTTGGCACTGGAGGTGGCCCAGCAGAAGCGTGGCATTGTAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| 3UTR GCA 72 bp | AGAGGGAGCAGATGCTGGTGCAGCACTGATCTACAATaGCACGCTTCTGCTGGGCCACCTCCAGTGCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RGSRCWCSTDLQ*HASAGPPPVPR Trigger: CCTTGGCACTGGAGGTGGCCCAGCAGAAGCGTGGCATTGTAGATCAGTGCTGCACCAGCATCTGCTCCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| 3UTR GCA 72 bp | TTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTCTAGTTaGAGTAGTTCTCCAGCTGGTAGAGGGAGCAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: LQRGRLGSGGSS*SSSPAGRGSRC Trigger: GCATCTGCTCCCTCTACCAGCTGGAGAACTACTGCAACTAGACCCACCACTACCCAGCCTACCCCTCTGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105930.8 ENSMUST00000105931.8 |
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| 3UTR CCA 72 bp | TGCAGTAGTTCTCCAGCTGGTAGAGGGAGCAGATGCTaGTGCAGCACTGATCTACAATGCCACGCTTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CSSSPAGRGSRC*CSTDLQCHASA Trigger: AGCAGAAGCGTGGCATTGTAGATCAGTGCTGCACCAGCATCTGCTCCCTCTACCAGCTGGAGAACTACTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| 3UTR CCA 72 bp | TCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTaGGTAGTGGTGGGTCTAGTTGCAGTAGTTCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SFKGFIHCRGVG*VVVGLVAVVLQ Trigger: CTGGAGAACTACTGCAACTAGACCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105930.8 ENSMUST00000105931.8 |
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| CDS-3UTR CCA 90 bp | GGGTCTAGTTGCAGTAGTTCTCCAGCTGGTAGAGGGAGCAGATGCTGGTGCAGCAAAGCCTGGGTGGGGTaGGACTCCCAGAGGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSSCSSSPAGRGSRCWCSKAWVG*DSQRKS Trigger: GCTCTTCCTCTGGGAGTCCCACCCCACCCAGGCTTT...GCTGCACCAGCATCTGCTCCCTCTACCAGCTGGAGAACTACTGCAACTAGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105930.8 ENSMUST00000105931.8 |
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| CDS-3UTR GCA 90 bp | TCTAGTTGCAGTAGTTCTCCAGCTGGTAGAGGGAGCAGATGCTGGTGCAGCACTGCAGGTGGCAGGGGTTaGATGCCTTGTGGGTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSCSSSPAGRGSRCWCSTAGGRG*MPCGSS Trigger: GGAGGACCCACAAGGCATGCAACCCCTGCCACCTGC...AGTGCTGCACCAGCATCTGCTCCCTCTACCAGCTGGAGAACTACTGCAACTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| CDS-3UTR CCA 90 bp | AGGGGTAGGCTGGGTAGTGGTGGGTCTAGTTGCAGTAGTTCTCCAGCTGGTAGAATGCCACGCTTCTGCTaGGCCACCTCCAGTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGRLGSGGSSCSSSPAGRMPRFC*ATSSAK Trigger: CTTGGCACTGGAGGTGGCCCAGCAGAAGCGTGGCAT...TCTACCAGCTGGAGAACTACTGCAACTAGACCCACCACTACCCAGCCTACCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105931.8 |
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| CDS-3UTR TCA 90 bp | GGGTCTAGTTGCAGTAGTTCTCCAGCTGGTAGAGGGAGCAGATGCTGGTGCAGCCACAAAGGTGCTGCTTaGCAAAAGCCTGGGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSCSSSPAGRGSRCWCSHKGAA*QKPGWG Trigger: ACCCCACCCAGGCTTTTGTCAAGCAGCACCTTTGTG...GCTGCACCAGCATCTGCTCCCTCTACCAGCTGGAGAACTACTGCAACTAGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105930.8 ENSMUST00000105931.8 |
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| CDS-3UTR CCA 90 bp | GTGGGTCTAGTTGCAGTAGTTCTCCAGCTGGTAGAGGGAGCAGATGCTGGTGCAAGAGCCTCCACCAGGTaGGAACCACAAAGGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VGLVAVVLQLVEGADAGARASTR*EPQRCC Trigger: GCAGCACCTTTGTGGTTCCCACCTGGTGGAGGCTCT...TGCACCAGCATCTGCTCCCTCTACCAGCTGGAGAACTACTGCAACTAGACCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105930.8 ENSMUST00000105931.8 |
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| CDS-3UTR CCA 90 bp | AGGCTGGGTAGTGGTGGGTCTAGTTGCAGTAGTTCTCCAGCTGGTAGAGGGAGCCTTCACGGCGGGACATaGGTGTGTAGAAGAAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RLGSGGSSCSSSPAGRGSLHGGT*VCRRSH Trigger: GTGGCTTCTTCTACACACCCATGTCCCGCCGTGAAG...GCTCCCTCTACCAGCTGGAGAACTACTGCAACTAGACCCACCACTACCCAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105930.8 ENSMUST00000105931.8 |
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| CDS-3UTR CCA 90 bp | GTAGTGGTGGGTCTAGTTGCAGTAGTTCTCCAGCTGGTAGAGGGAGCAGATGCTAGAGCCTCCACCAGGTaGGAACCACAAAGGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VVVGLVAVVLQLVEGADARASTR*EPQRCC Trigger: GCAGCACCTTTGTGGTTCCCACCTGGTGGAGGCTCT...AGCATCTGCTCCCTCTACCAGCTGGAGAACTACTGCAACTAGACCCACCACTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105930.8 ENSMUST00000105931.8 |
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| CDS-3UTR CCA 90 bp | AGAGGGGTAGGCTGGGTAGTGGTGGGTCTAGTTGCAGTAGTTCTCCAGCTGGTACTTCACGGCGGGACATaGGTGTGTAGAAGAAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RGVGWVVVGLVAVVLQLVLHGGT*VCRRSH Trigger: GTGGCTTCTTCTACACACCCATGTCCCGCCGTGAAG...TACCAGCTGGAGAACTACTGCAACTAGACCCACCACTACCCAGCCTACCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105930.8 ENSMUST00000105931.8 |
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| CDS-3UTR TCA 90 bp | TGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTTCCAGTGCCAAGGTCTaGAGGTCACCTGCTCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: CSFKGFIHCRGVGWVVVGSSAKV*RSPAPG Trigger: CCCGGGAGCAGGTGACCTTCAGACCTTGGCACTGGA...ACCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000220.3 ENSMUST00000105931.8 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR GCA 90 bp | GTGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGACAATGCCACGCTTCTaGTGGGCCACCTCCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: VLIQRFYSLQRGRLGSGGTMPRF*WATSSA Trigger: GGCACTGGAGGTGGCCCAGCAGAAGCGTGGCATTGT...CCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105931.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR CCA 90 bp | GTGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGATGCCACGCTTCTGCTaGGCCACCTCCAGTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: VLIQRFYSLQRGRLGSGGMPRFC*ATSSAK Trigger: CTTGGCACTGGAGGTGGCCCAGCAGAAGCGTGGCAT...CCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105931.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR GCA 90 bp | GTTGCAGTAGTTCTCCAGCTGGTAGAGGGAGCAGATGCTGGTGCAGCACTGATCTGGGAACCACAAAGGTaGTGCTTGACAAAAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VAVVLQLVEGADAGAALIWEPQR*CLTKAW Trigger: CCAGGCTTTTGTCAAGCAGCACCTTTGTGGTTCCCA...GATCAGTGCTGCACCAGCATCTGCTCCCTCTACCAGCTGGAGAACTACTGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| CDS-3UTR GCA 90 bp | TGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTCTGGGCCACCTCCAGTaGCAAGGTCTGAAGGTCACC | + |
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Preference number: 4 (lower is better) Translates to: CSFKGFIHCRGVGWVVVGLGHLQ*QGLKVT Trigger: GGTGACCTTCAGACCTTGGCACTGGAGGTGGCCCAG...ACCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000220.3 ENSMUST00000105931.8 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR GCA 90 bp | TGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTACAATGCCACGCTTCTaGTGGGCCACCTCCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: CSFKGFIHCRGVGWVVVGTMPRF*WATSSA Trigger: GGCACTGGAGGTGGCCCAGCAGAAGCGTGGCATTGT...ACCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000220.3 ENSMUST00000105931.8 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR CCA 90 bp | TGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTAAAGCCTGGGTGGGGTaGGACTCCCAGAGGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: CSFKGFIHCRGVGWVVVGKAWVG*DSQRKS Trigger: GCTCTTCCTCTGGGAGTCCCACCCCACCCAGGCTTT...ACCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000000220.3 ENSMUST00000105930.8 ENSMUST00000105931.8 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR CCA 90 bp | GTGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGAGAGCCTCCACCAGGTaGGAACCACAAAGGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VLIQRFYSLQRGRLGSGGRASTR*EPQRCC Trigger: GCAGCACCTTTGTGGTTCCCACCTGGTGGAGGCTCT...CCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105931.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR CCA 90 bp | TGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTATGCCACGCTTCTGCTaGGCCACCTCCAGTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: CSFKGFIHCRGVGWVVVGMPRFC*ATSSAK Trigger: CTTGGCACTGGAGGTGGCCCAGCAGAAGCGTGGCAT...ACCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000220.3 ENSMUST00000105931.8 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR GCA 90 bp | ATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTCTAGTACAATGCCACGCTTCTaGTGGGCCACCTCCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: IQRFYSLQRGRLGSGGSSTMPRF*WATSSA Trigger: GGCACTGGAGGTGGCCCAGCAGAAGCGTGGCATTGT...ACTAGACCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105931.8 |
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| CDS-3UTR CCA 90 bp | ATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTCTAGTAAAGCCTGGGTGGGGTaGGACTCCCAGAGGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: IQRFYSLQRGRLGSGGSSKAWVG*DSQRKS Trigger: GCTCTTCCTCTGGGAGTCCCACCCCACCCAGGCTTT...ACTAGACCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105930.8 ENSMUST00000105931.8 |
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| CDS-3UTR CCA 90 bp | TTGTGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGAAAGCCTGGGTGGGGTaGGACTCCCAGAGGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LCSFKGFIHCRGVGWVVVKAWVG*DSQRKS Trigger: GCTCTTCCTCTGGGAGTCCCACCCCACCCAGGCTTT...CACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000105931.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR CCA 90 bp | TGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTTGCTTGACAAAAGCCTaGGTGGGGTGGGACTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: CSFKGFIHCRGVGWVVVGCLTKA*VGWDSQ Trigger: CTGGGAGTCCCACCCCACCCAGGCTTTTGTCAAGCA...ACCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000000220.3 ENSMUST00000105930.8 ENSMUST00000105931.8 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR CCA 90 bp | TGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTAGAGCCTCCACCAGGTaGGAACCACAAAGGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: CSFKGFIHCRGVGWVVVGRASTR*EPQRCC Trigger: GCAGCACCTTTGTGGTTCCCACCTGGTGGAGGCTCT...ACCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000000220.3 ENSMUST00000105930.8 ENSMUST00000105931.8 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR CCA 90 bp | GTGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGCTTCACGGCGGGACATaGGTGTGTAGAAGAAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: VLIQRFYSLQRGRLGSGGLHGGT*VCRRSH Trigger: GTGGCTTCTTCTACACACCCATGTCCCGCCGTGAAG...CCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105931.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR CCA 90 bp | TGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTCAGTTGTGCCACTTGTaGGTCCTCCACTTCACGGCG | + |
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Preference number: 4 (lower is better) Translates to: CSFKGFIHCRGVGWVVVGQLCHL*VLHFTA Trigger: CGCCGTGAAGTGGAGGACCCACAAGTGGCACAACTG...ACCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000220.3 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR CCA 90 bp | TTGTGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGATGCCACGCTTCTGCTaGGCCACCTCCAGTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: LCSFKGFIHCRGVGWVVVMPRFC*ATSSAK Trigger: CTTGGCACTGGAGGTGGCCCAGCAGAAGCGTGGCAT...CACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105931.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR TCA 90 bp | TGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTCACAAAGGTGCTGCTTaGCAAAAGCCTGGGTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: CSFKGFIHCRGVGWVVVGHKGAA*QKPGWG Trigger: ACCCCACCCAGGCTTTTGTCAAGCAGCACCTTTGTG...ACCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000000220.3 ENSMUST00000105930.8 ENSMUST00000105931.8 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR GCA 90 bp | ATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTCTAGTTGCAGTAGTTCTCTGGGAACCACAAAGGTaGTGCTTGACAAAAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: IHCRGVGWVVVGLVAVVLWEPQR*CLTKAW Trigger: CCAGGCTTTTGTCAAGCAGCACCTTTGTGGTTCCCA...GAGAACTACTGCAACTAGACCCACCACTACCCAGCCTACCCCTCTGCAATGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105930.8 ENSMUST00000105931.8 |
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| CDS-3UTR CCA 90 bp | TTGTGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGAGAGCCTCCACCAGGTaGGAACCACAAAGGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LCSFKGFIHCRGVGWVVVRASTR*EPQRCC Trigger: GCAGCACCTTTGTGGTTCCCACCTGGTGGAGGCTCT...CACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000105931.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR CCA 90 bp | TGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTCTTCACGGCGGGACATaGGTGTGTAGAAGAAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: CSFKGFIHCRGVGWVVVGLHGGT*VCRRSH Trigger: GTGGCTTCTTCTACACACCCATGTCCCGCCGTGAAG...ACCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000000220.3 ENSMUST00000105930.8 ENSMUST00000105931.8 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR TCA 90 bp | ACAGAAGCAAAGACACATAGGAAAATCCAGTCAGGAGTAGCTGAGCAACCTCCTCACAAAGGTGCTGCTTaGCAAAAGCCTGGGTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: TEAKTHRKIQSGVAEQPPHKGAA*QKPGWG Trigger: ACCCCACCCAGGCTTTTGTCAAGCAGCACCTTTGTG...AGGAGGTTGCTCAGCTACTCCTGACTGGATTTTCCTATGTGTCTTTGCTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| CDS-3UTR TCA 90 bp | TTGTGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGCACAAAGGTGCTGCTTaGCAAAAGCCTGGGTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LCSFKGFIHCRGVGWVVVHKGAA*QKPGWG Trigger: ACCCCACCCAGGCTTTTGTCAAGCAGCACCTTTGTG...CACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000105931.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR TCA 90 bp | TGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTATGCTGGTGCAGCACTaGTCTACAATGCCACGCTTC | + |
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Preference number: 4 (lower is better) Translates to: CSFKGFIHCRGVGWVVVGMLVQH*STMPRF Trigger: GAAGCGTGGCATTGTAGATCAGTGCTGCACCAGCAT...ACCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000220.3 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR TCA 90 bp | TTGTGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGATGCTGGTGCAGCACTaGTCTACAATGCCACGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LCSFKGFIHCRGVGWVVVMLVQH*STMPRF Trigger: GAAGCGTGGCATTGTAGATCAGTGCTGCACCAGCAT...CACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR GCA 90 bp | TGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTTGGGAACCACAAAGGTaGTGCTTGACAAAAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: CSFKGFIHCRGVGWVVVGWEPQR*CLTKAW Trigger: CCAGGCTTTTGTCAAGCAGCACCTTTGTGGTTCCCA...ACCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000000220.3 ENSMUST00000105930.8 ENSMUST00000105931.8 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR GCA 90 bp | TTGTGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGTGGGAACCACAAAGGTaGTGCTTGACAAAAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LCSFKGFIHCRGVGWVVVWEPQR*CLTKAW Trigger: CCAGGCTTTTGTCAAGCAGCACCTTTGTGGTTCCCA...CACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000105931.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS GCA 90 bp | ACGCTTCTGCTGGGCCACCTCCAGTGCCAAGGTCTGAAGGTCACCTaGTCCCGGGCCTCCACCCAGCTCCAGTTGTGCCACTTGTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: TLLLGHLQCQGLKVT*SRASTQLQLCHLWV Trigger: GACCCACAAGTGGCACAACTGGAGCTGGGTGGAGGCCCGGGAGCAGGTGACCTTCAGACCTTGGCACTGGAGGTGGCCCAGCAGAAGCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000220.3 ENSMUST00000105932.2 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS GCA 90 bp | AAGGTCACCTGCTCCCGGGCCTCCACCCAGCTCCAGTTGTGCCACTaGCAGGGAGGTTGTGTCAGAGCAGGCCAGGGCATCAGCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: KVTCSRASTQLQLCH*QGGCVRAGQGISST Trigger: AGTGCTGCTGATGCCCTGGCCTGCTCTGACACAACCTCCCTGGCAGTGGCACAACTGGAGCTGGGTGGAGGCCCGGGAGCAGGTGACCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105931.8 |
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| CDS CCA 90 bp | GTCACCTGCTCCCGGGCCTCCACCCAGCTCCAGTTGTGCCACTTGTaGGTCCTCCACTTCACGGCGGGACATGGGTGTGTAGAAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VTCSRASTQLQLCHL*VLHFTAGHGCVEEA Trigger: GGCTTCTTCTACACACCCATGTCCCGCCGTGAAGTGGAGGACCCACAAGTGGCACAACTGGAGCTGGGTGGAGGCCCGGGAGCAGGTGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000220.3 ENSMUST00000105932.2 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR CAA 90 bp | CTTCTGCTGGGCCACCTCCAGTGCCAAGGTCTGAAGGTCACCTGCTCCCGGGCCCCACAAAGGTGCTGCTaGACAAAAGCCTGGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLGHLQCQGLKVTCSRAPQRCC*TKAWVG Trigger: CCCCACCCAGGCTTTTGTCAAGCAGCACCTTTGTGG...GGCCCGGGAGCAGGTGACCTTCAGACCTTGGCACTGGAGGTGGCCCAGCAGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| CDS CCA 90 bp | GCAGGGGTTGCATGCCTTGTGGGTCCTCCACTTCACGGCGGGACATaGGTGTGTAGAAGAAGCCACGCTCCCCACACACCAGGTAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AGVACLVGPPLHGGT*VCRRSHAPHTPGRE Trigger: CTCTCTACCTGGTGTGTGGGGAGCGTGGCTTCTTCTACACACCCATGTCCCGCCGTGAAGTGGAGGACCCACAAGGCATGCAACCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| CDS GCA 90 bp | GCAGCACTGATCTACAATGCCACGCTTCTGCTGGGCCACCTCCAGTaGCAAGGTCTGAAGGTCACCTTGTGGGTCCTCCACTTCACGGCG | + |
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Preference number: 5 (lower is better) Translates to: AALIYNATLLLGHLQ*QGLKVTLWVLHFTA Trigger: CGCCGTGAAGTGGAGGACCCACAAGGTGACCTTCAGACCTTGGCACTGGAGGTGGCCCAGCAGAAGCGTGGCATTGTAGATCAGTGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162317.2 |
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| CDS CCA 90 bp | GCTCCAGTTGTGCCACTTGTGGGTCCTCCACTTCACGGCGGGACATaGGTGTGTAGAAGAAGCCACGCTCCCCACACACCAGGTAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: APVVPLVGPPLHGGT*VCRRSHAPHTPGRE Trigger: CTCTCTACCTGGTGTGTGGGGAGCGTGGCTTCTTCTACACACCCATGTCCCGCCGTGAAGTGGAGGACCCACAAGTGGCACAACTGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000220.3 ENSMUST00000105932.2 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS CCA 90 bp | AGGGCATCAGCAGCACTTGTGGGTCCTCCACTTCACGGCGGGACATaGGTGTGTAGAAGAAGCCACGCTCCCCACACACCAGGTAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RASAALVGPPLHGGT*VCRRSHAPHTPGRE Trigger: CTCTCTACCTGGTGTGTGGGGAGCGTGGCTTCTTCTACACACCCATGTCCCGCCGTGAAGTGGAGGACCCACAAGTGCTGCTGATGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105931.8 |
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| CDS CCA 90 bp | CTTCTGCTGGGCCACCTCCAGTGCCAAGGTCTGAAGGTCACCTTGTaGGTCCTCCACTTCACGGCGGGACATGGGTGTGTAGAAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLGHLQCQGLKVTL*VLHFTAGHGCVEEA Trigger: GGCTTCTTCTACACACCCATGTCCCGCCGTGAAGTGGAGGACCCACAAGGTGACCTTCAGACCTTGGCACTGGAGGTGGCCCAGCAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162317.2 |
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| CDS-3UTR CAA 90 bp | CATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTCTAGTTGCAGTAGTTCTCCAGCCACTGCCAGGGAGGTaGTGTCAGAGCAGGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HCRGVGWVVVGLVAVVLQPLPGR*CQSRPG Trigger: CCCTGGCCTGCTCTGACACAACCTCCCTGGCAGTGG...CTGGAGAACTACTGCAACTAGACCCACCACTACCCAGCCTACCCCTCTGCAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105931.8 |
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| CDS-3UTR CAA 90 bp | GGGGTAGGCTGGGTAGTGGTGGGTCTAGTTGCAGTAGTTCTCCAGCTGGTAGAGTCCACCCAGCTCCAGTaGTGCCACTGCCAGGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GVGWVVVGLVAVVLQLVESTQLQ*CHCQGG Trigger: ACCTCCCTGGCAGTGGCACAACTGGAGCTGGGTGGA...CTCTACCAGCTGGAGAACTACTGCAACTAGACCCACCACTACCCAGCCTACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105931.8 |
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| CDS CCA 90 bp | GCAGTAGTTCTCCAGCTTGTGGGTCCTCCACTTCACGGCGGGACATaGGTGTGTAGAAGAAGCCACGCTCCCCACACACCAGGTAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AVVLQLVGPPLHGGT*VCRRSHAPHTPGRE Trigger: CTCTCTACCTGGTGTGTGGGGAGCGTGGCTTCTTCTACACACCCATGTCCCGCCGTGAAGTGGAGGACCCACAAGCTGGAGAACTACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125933.2 |
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| CDS CCA 90 bp | AGGTCTGAAGGTCACCTTGTGGGTCCTCCACTTCACGGCGGGACATaGGTGTGTAGAAGAAGCCACGCTCCCCACACACCAGGTAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSEGHLVGPPLHGGT*VCRRSHAPHTPGRE Trigger: CTCTCTACCTGGTGTGTGGGGAGCGTGGCTTCTTCTACACACCCATGTCCCGCCGTGAAGTGGAGGACCCACAAGGTGACCTTCAGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162317.2 |
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| CDS-3UTR CAA 90 bp | GGTAGGCTGGGTAGTGGTGGGTCTAGTTGCAGTAGTTCTCCAGCTGGTAGAGGGGGGCATCAGCAGCACTaGTGGGTCCTCCACTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: GRLGSGGSSCSSSPAGRGGHQQH*WVLHFT Trigger: CGTGAAGTGGAGGACCCACAAGTGCTGCTGATGCCC...CCCTCTACCAGCTGGAGAACTACTGCAACTAGACCCACCACTACCCAGCCTACC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000105931.8 |
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| CDS-3UTR CAA 90 bp | ATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTCTAGTTGCAGTAGTTCTCTGCAGGTGGCAGGGGTaGCATGCCTTGTGGGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: IHCRGVGWVVVGLVAVVLCRWQG*HALWVL Trigger: GAGGACCCACAAGGCATGCAACCCCTGCCACCTGCA...GAGAACTACTGCAACTAGACCCACCACTACCCAGCCTACCCCTCTGCAATGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| CDS-3UTR CAA 90 bp | GTAGTGGTGGGTCTAGTTGCAGTAGTTCTCCAGCTGGTAGAGGGAGCAGATGCTCCACAAAGGTGCTGCTaGACAAAAGCCTGGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VVVGLVAVVLQLVEGADAPQRCC*TKAWVG Trigger: CCCCACCCAGGCTTTTGTCAAGCAGCACCTTTGTGG...AGCATCTGCTCCCTCTACCAGCTGGAGAACTACTGCAACTAGACCCACCACTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105930.8 ENSMUST00000105931.8 |
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| CDS-3UTR CAA 90 bp | GTGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGCCACAAAGGTGCTGCTaGACAAAAGCCTGGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLIQRFYSLQRGRLGSGGPQRCC*TKAWVG Trigger: CCCCACCCAGGCTTTTGTCAAGCAGCACCTTTGTGG...CCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000105931.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR CAA 90 bp | TGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTTCCACCCAGCTCCAGTaGTGCCACTTGTGGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CSFKGFIHCRGVGWVVVGSTQLQ*CHLWVL Trigger: GAGGACCCACAAGTGGCACAACTGGAGCTGGGTGGA...ACCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000220.3 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS-3UTR CAA 90 bp | TGCTCATTCAAAGGTTTTATTCATTGCAGAGGGGTAGGCTGGGTAGTGGTGGGTCCACAAAGGTGCTGCTaGACAAAAGCCTGGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CSFKGFIHCRGVGWVVVGPQRCC*TKAWVG Trigger: CCCCACCCAGGCTTTTGTCAAGCAGCACCTTTGTGG...ACCCACCACTACCCAGCCTACCCCTCTGCAATGAATAAAACCTTTGAATGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000000220.3 ENSMUST00000105930.8 ENSMUST00000105931.8 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS CAA 72 bp | TGCTCCCGGGCCTCCACCCAGCTCCAGTTGTGCCACTaGTGGGTCCTCCACTTCACGGCGGGACATGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CSRASTQLQLCH*WVLHFTAGHGC Trigger: ACACCCATGTCCCGCCGTGAAGTGGAGGACCCACAAGTGGCACAACTGGAGCTGGGTGGAGGCCCGGGAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000220.3 ENSMUST00000105932.2 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS CAA 72 bp | CTGGGCCACCTCCAGTGCCAAGGTCTGAAGGTCACCTaGTGGGTCCTCCACTTCACGGCGGGACATGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LGHLQCQGLKVT*WVLHFTAGHGC Trigger: ACACCCATGTCCCGCCGTGAAGTGGAGGACCCACAAGGTGACCTTCAGACCTTGGCACTGGAGGTGGCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162317.2 |
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| CDS CAA 90 bp | AAGGTCACCTGCTCCCGGGCCTCCACCCAGCTCCAGTTGTGCCACTaGTGGGTCCTCCACTTCACGGCGGGACATGGGTGTGTAGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: KVTCSRASTQLQLCH*WVLHFTAGHGCVEE Trigger: TTCTTCTACACACCCATGTCCCGCCGTGAAGTGGAGGACCCACAAGTGGCACAACTGGAGCTGGGTGGAGGCCCGGGAGCAGGTGACCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000220.3 ENSMUST00000105932.2 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000210288.2 |
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| CDS CCA 72 bp | AGGTGGGAACCACAAAGGTGCTGCTTGACAAAAGCCTaGGTGGGGTGGGACTCCCAGAGGAAGAGCAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RWEPQRCCLTKA*VGWDSQRKSRA Trigger: GGCCCTGCTCTTCCTCTGGGAGTCCCACCCCACCCAGGCTTTTGTCAAGCAGCACCTTTGTGGTTCCCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000000220.3 ENSMUST00000105930.8 ENSMUST00000105931.8 ENSMUST00000105932.2 ENSMUST00000105933.8 ENSMUST00000105934.8 ENSMUST00000125933.2 ENSMUST00000162317.2 ENSMUST00000210288.2 |
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| CDS CCA 72 bp | CTTAACCCCTGCAGGTGGCAGGGGTTGCATGCCTTGTaGGTCCTCCACTTCACGGCGGGACATGGGTGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LNPCRWQGLHAL*VLHFTAGHGCV Trigger: TACACACCCATGTCCCGCCGTGAAGTGGAGGACCCACAAGGCATGCAACCCCTGCCACCTGCAGGGGTTAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105930.8 |
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| CDS CCA 72 bp | GGCCACCTCCAGTGCCAAGGTCTGAAGGTCACCTTGTaGGTCCTCCACTTCACGGCGGGACATGGGTGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: GHLQCQGLKVTL*VLHFTAGHGCV Trigger: TACACACCCATGTCCCGCCGTGAAGTGGAGGACCCACAAGGTGACCTTCAGACCTTGGCACTGGAGGTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162317.2 |
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| CDS CCA 72 bp | TTGTGTCAGAGCAGGCCAGGGCATCAGCAGCACTTGTaGGTCCTCCACTTCACGGCGGGACATGGGTGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LCQSRPGHQQHL*VLHFTAGHGCV Trigger: TACACACCCATGTCCCGCCGTGAAGTGGAGGACCCACAAGTGCTGCTGATGCCCTGGCCTGCTCTGACACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105931.8 |
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| CDS CAA 90 bp | ACGCTTCTGCTGGGCCACCTCCAGTGCCAAGGTCTGAAGGTCACCTaGTGGGTCCTCCACTTCACGGCGGGACATGGGTGTGTAGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TLLLGHLQCQGLKVT*WVLHFTAGHGCVEE Trigger: TTCTTCTACACACCCATGTCCCGCCGTGAAGTGGAGGACCCACAAGGTGACCTTCAGACCTTGGCACTGGAGGTGGCCCAGCAGAAGCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162317.2 |
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| CDS GCA 72 bp | ATCTACAATGCCACGCTTCTGCTGGGCCACCTCCAGTaGCAAGGTCTGAAGGTCACCTTGTGGGTCCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: IYNATLLLGHLQ*QGLKVTLWVLH Trigger: GTGGAGGACCCACAAGGTGACCTTCAGACCTTGGCACTGGAGGTGGCCCAGCAGAAGCGTGGCATTGTAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162317.2 |
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