Pregenerated sensors for INS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035804Ensembl transcript IDs: ENSMUST00000039652.6
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCTTCCTCTCAGGAGTCAGTTGCTCTTGTCAGGGTTTTATCACAGCATCAGGGGTTCATTGCAGAGGGGTaGGGCGGGTCGAGGTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: PSSQESVALVRVLSQHQGFIAEG*GGSRWA Trigger: GGCCCACCTCGACCCGCCCCACCCCTCTGCAATGAA...CCCCTGATGCTGTGATAAAACCCTGACAAGAGCAACTGACTCCTGAGAGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCTCTCAGGAGTCAGTTGCTCTTGTCAGGGTTTTATCACAGCATCAGGGGGGTTGCCTACCTTCTTaGGCAGGAAGCAGAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: PSSQESVALVRVLSQHQGGCLPS*AGSRIP Trigger: TGGAATTCTGCTTCCTGCCCAAGAAGGTAGGCAACC...CCCCTGATGCTGTGATAAAACCCTGACAAGAGCAACTGACTCCTGAGAGGAAGG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| 3UTR TCA 72 bp | GATAATAGGAGCAGTTCCCTGAGGTTCCTGTTGCTGTaGCTCCCCTGCTACGGATGGACTGTTTGTAACCTG | + |
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Preference number: 3 (lower is better) Translates to: DNRSSSLRFLLL*LPCYGWTVCNL Trigger: CAGGTTACAAACAGTCCATCCGTAGCAGGGGAGTCACAGCAACAGGAACCTCAGGGAACTGCTCCTATTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| 3UTR TCA 72 bp | CTATTCTTGATTGTGGGGATAATAGGAGCAGTTCCCTaGGGTTCCTGTTGCTGTGACTCCCCTGCTACGGAT | + |
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Preference number: 3 (lower is better) Translates to: LFLIVGIIGAVP*GSCCCDSPATD Trigger: ATCCGTAGCAGGGGAGTCACAGCAACAGGAACCTCAGGGAACTGCTCCTATTATCCCCACAATCAAGAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| 3UTR TCA 72 bp | CCCTGCTACGGATGGACTGTTTGTAACCTGGAATTGTaGGCTAGAATAAACCTTCCTCTCAGGAGTCAGTTG | + |
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Preference number: 3 (lower is better) Translates to: PCYGWTVCNLEL*ARINLPLRSQL Trigger: CAACTGACTCCTGAGAGGAAGGTTTATTCTAGCTCACAATTCCAGGTTACAAACAGTCCATCCGTAGCAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| 3UTR CCA 72 bp | GGCAGGAAGCAGAATTCCAGATACTTGAATTATTCCTaGTGTTTTATCACAAGCTTCATACATGATTATATA | + |
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Preference number: 3 (lower is better) Translates to: GRKQNSRYLNYS*CFITSFIHDYI Trigger: TATATAATCATGTATGAAGCTTGTGATAAAACACCAGGAATAATTCAAGTATCTGGAATTCTGCTTCCTGCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS-3UTR GCA 90 bp | CCTTCCTCTCAGGAGTCAGTTGCTCTTGTCAGGGTTTTATCACAGCATCAGGGGACAATGCCACGCTTCTaGCGGGCCACCTCCAACGCC | + |
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Preference number: 4 (lower is better) Translates to: PSSQESVALVRVLSQHQGTMPRF*RATSNA Trigger: GGCGTTGGAGGTGGCCCGGCAGAAGCGTGGCATTGT...CCCCTGATGCTGTGATAAAACCCTGACAAGAGCAACTGACTCCTGAGAGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS-3UTR CCA 90 bp | CCTTCCTCTCAGGAGTCAGTTGCTCTTGTCAGGGTTTTATCACAGCATCAGGGGAAGCCTGGGTGGGTTTaGGCTCCCAGAGGGCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: PSSQESVALVRVLSQHQGKPGWV*APRGQA Trigger: TGCTTGCCCTCTGGGAGCCCAAACCCACCCAGGCTT...CCCCTGATGCTGTGATAAAACCCTGACAAGAGCAACTGACTCCTGAGAGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS-3UTR GCA 90 bp | CCTTCCTCTCAGGAGTCAGTTGCTCTTGTCAGGGTTTTATCACAGCATCAGGGGAGCACTGATCCACAATaGCACGCTTCTGCCGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: PSSQESVALVRVLSQHQGSTDPQ*HASAGP Trigger: TGGCCCGGCAGAAGCGTGGCATTGTGGATCAGTGCT...CCCCTGATGCTGTGATAAAACCCTGACAAGAGCAACTGACTCCTGAGAGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS-3UTR TCA 90 bp | CCTTCCTCTCAGGAGTCAGTTGCTCTTGTCAGGGTTTTATCACAGCATCAGGGGATGCTGGTGCAGCACTaGTCCACAATGCCACGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PSSQESVALVRVLSQHQGMLVQH*STMPRF Trigger: GAAGCGTGGCATTGTGGATCAGTGCTGCACCAGCAT...CCCCTGATGCTGTGATAAAACCCTGACAAGAGCAACTGACTCCTGAGAGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS-3UTR GCA 90 bp | CCTTCCTCTCAGGAGTCAGTTGCTCTTGTCAGGGTTTTATCACAGCATCAGGGGGGGAGCAGATGCTGGTaGAGCACTGATCCACAATGC | + |
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Preference number: 4 (lower is better) Translates to: PSSQESVALVRVLSQHQGGSRCW*STDPQC Trigger: GCATTGTGGATCAGTGCTGCACCAGCATCTGCTCCC...CCCCTGATGCTGTGATAAAACCCTGACAAGAGCAACTGACTCCTGAGAGGAAGG 53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS-3UTR GCA 90 bp | CCTTCCTCTCAGGAGTCAGTTGCTCTTGTCAGGGTTTTATCACAGCATCAGGGGGGTAGAGGGAGCAGATaGTGGTGCAGCACTGATCCA | + |
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Preference number: 4 (lower is better) Translates to: PSSQESVALVRVLSQHQGGRGSR*WCSTDP Trigger: TGGATCAGTGCTGCACCAGCATCTGCTCCCTCTACC...CCCCTGATGCTGTGATAAAACCCTGACAAGAGCAACTGACTCCTGAGAGGAAGG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS-3UTR CCA 90 bp | CCTTCCTCTCAGGAGTCAGTTGCTCTTGTCAGGGTTTTATCACAGCATCAGGGGCTTCACGGCGGGACTTaGGTGTGTAGAAGAAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PSSQESVALVRVLSQHQGLHGGT*VCRRSH Trigger: GTGGCTTCTTCTACACACCCAAGTCCCGCCGTGAAG...CCCCTGATGCTGTGATAAAACCCTGACAAGAGCAACTGACTCCTGAGAGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS-3UTR CCA 90 bp | CCTTCCTCTCAGGAGTCAGTTGCTCTTGTCAGGGTTTTATCACAGCATCAGGGGTGTTTGACAAAAGCCTaGGTGGGTTTGGGCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PSSQESVALVRVLSQHQGCLTKA*VGLGSQ Trigger: CTGGGAGCCCAAACCCACCCAGGCTTTTGTCAAACA...CCCCTGATGCTGTGATAAAACCCTGACAAGAGCAACTGACTCCTGAGAGGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS-3UTR TCA 90 bp | CCTTCCTCTCAGGAGTCAGTTGCTCTTGTCAGGGTTTTATCACAGCATCAGGGGCACAAAGATGCTGTTTaGCAAAAGCCTGGGTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: PSSQESVALVRVLSQHQGHKDAV*QKPGWV Trigger: AACCCACCCAGGCTTTTGTCAAACAGCATCTTTGTG...CCCCTGATGCTGTGATAAAACCCTGACAAGAGCAACTGACTCCTGAGAGGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| 3UTR CAA 72 bp | ACTTTTAGACTAGTAGCTTCAGTGGCATTTACACGGTaGCCTACCTTCTTGGGCAGGAAGCAGAATTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: TFRLVASVAFTR*PTFLGRKQNSR Trigger: TCTGGAATTCTGCTTCCTGCCCAAGAAGGTAGGCAACCGTGTAAATGCCACTGAAGCTACTAGTCTAAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| 3UTR CAA 72 bp | GTAGCTTCAGTGGCATTTACACGGTTGCCTACCTTCTaGGGCAGGAAGCAGAATTCCAGATACTTGAATTAT | + |
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Preference number: 4 (lower is better) Translates to: VASVAFTRLPTF*GRKQNSRYLNY Trigger: ATAATTCAAGTATCTGGAATTCTGCTTCCTGCCCAAGAAGGTAGGCAACCGTGTAAATGCCACTGAAGCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS CCA 90 bp | GCTCCAGTTGTTCCACTTGTGGGTCCTCCACTTCACGGCGGGACTTaGGTGTGTAGAAGAAGCCACGCTCCCCACACACCAGGTAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: APVVPLVGPPLHGGT*VCRRSHAPHTPGRE Trigger: CTCTCTACCTGGTGTGTGGGGAGCGTGGCTTCTTCTACACACCCAAGTCCCGCCGTGAAGTGGAGGACCCACAAGTGGAACAACTGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS-3UTR CAA 90 bp | CCTTCCTCTCAGGAGTCAGTTGCTCTTGTCAGGGTTTTATCACAGCATCAGGGGAAAGCCTGGGTGGGTTaGGGCTCCCAGAGGGCAAGC | + |
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Preference number: 5 (lower is better) Translates to: PSSQESVALVRVLSQHQGKAWVG*GSQRAS Trigger: GCTTGCCCTCTGGGAGCCCAAACCCACCCAGGCTTT...CCCCTGATGCTGTGATAAAACCCTGACAAGAGCAACTGACTCCTGAGAGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS-3UTR CAA 90 bp | CCTTCCTCTCAGGAGTCAGTTGCTCTTGTCAGGGTTTTATCACAGCATCAGGGGCCACAAAGATGCTGTTaGACAAAAGCCTGGGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: PSSQESVALVRVLSQHQGPQRCC*TKAWVG Trigger: ACCCACCCAGGCTTTTGTCAAACAGCATCTTTGTGG...CCCCTGATGCTGTGATAAAACCCTGACAAGAGCAACTGACTCCTGAGAGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS CAA 72 bp | GGTCTGAAGGTCCCCGGGGCTTCCTCCCAGCTCCAGTaGTTCCACTTGTGGGTCCTCCACTTCACGGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: GLKVPGASSQLQ*FHLWVLHFTAG Trigger: TCCCGCCGTGAAGTGGAGGACCCACAAGTGGAACAACTGGAGCTGGGAGGAAGCCCCGGGGACCTTCAGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS CCA 72 bp | AGGTGGGGACCACAAAGATGCTGTTTGACAAAAGCCTaGGTGGGTTTGGGCTCCCAGAGGGCAAGCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: RWGPQRCCLTKA*VGLGSQRASRA Trigger: GGCCCTGCTTGCCCTCTGGGAGCCCAAACCCACCCAGGCTTTTGTCAAACAGCATCTTTGTGGTCCCCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS TCA 72 bp | GAGCCTCTACCAGGTGGGGACCACAAAGATGCTGTTTaGCAAAAGCCTGGGTGGGTTTGGGCTCCCAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: EPLPGGDHKDAV*QKPGWVWAPRG Trigger: CCCTCTGGGAGCCCAAACCCACCCAGGCTTTTGTCAAACAGCATCTTTGTGGTCCCCACCTGGTAGAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS GCA 72 bp | AGTAGTTCTCCAGCTGGTAGAGGGAGCAGATGCTGGTaGAGCACTGATCCACAATGCCACGCTTCTGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: SSSPAGRGSRCW*STDPQCHASAG Trigger: CCCGGCAGAAGCGTGGCATTGTGGATCAGTGCTGCACCAGCATCTGCTCCCTCTACCAGCTGGAGAACTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS CCA 72 bp | TGCAGTAGTTCTCCAGCTGGTAGAGGGAGCAGATGCTaGTGCAGCACTGATCCACAATGCCACGCTTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: CSSSPAGRGSRC*CSTDPQCHASA Trigger: GGCAGAAGCGTGGCATTGTGGATCAGTGCTGCACCAGCATCTGCTCCCTCTACCAGCTGGAGAACTACTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS CAA 72 bp | AGAGCCTCTACCAGGTGGGGACCACAAAGATGCTGTTaGACAAAAGCCTGGGTGGGTTTGGGCTCCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: RASTRWGPQRCC*TKAWVGLGSQR Trigger: CCTCTGGGAGCCCAAACCCACCCAGGCTTTTGTCAAACAGCATCTTTGTGGTCCCCACCTGGTAGAGGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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| CDS GCA 72 bp | AGTTGCAGTAGTTCTCCAGCTGGTAGAGGGAGCAGATaGTGGTGCAGCACTGATCCACAATGCCACGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SCSSSPAGRGSR*WCSTDPQCHAS Trigger: AGAAGCGTGGCATTGTGGATCAGTGCTGCACCAGCATCTGCTCCCTCTACCAGCTGGAGAACTACTGCAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039652.6 |
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