Pregenerated sensors for INPP5K (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006127Ensembl transcript IDs: ENSMUST00000006286.9, ENSMUST00000139856.2, ENSMUST00000150857.8
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGAGGTGGGGAGCTGGAGGATAGTCAGGAGCCTCCTCAGGGGCTaGGCCAGACCCAGCGCTGCTGGCAGTGCTGAAGCAGAGCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: WEVGSWRIVRSLLRG*ARPSAAGSAEAELA Trigger: AGCCAGCTCTGCTTCAGCACTGCCAGCAGCGCTGGGTCTGGCCCAGCCCCTGAGGAGGCTCCTGACTATCCTCCAGCTCCCCACCTCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006286.9 ENSMUST00000139856.2 ENSMUST00000150857.8 |
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| 3UTR CCA 90 bp | AGAGAGCAGAGGAGTCTAGCTGAGCTCCTCTGGGAGGTGGGGAGCTaGAGGATAGTCAGGAGCCTCCTCAGGGGCTGGGCCAGACCCAGC | + |
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Preference number: 1 (lower is better) Translates to: REQRSLAELLWEVGS*RIVRSLLRGWARPS Trigger: GCTGGGTCTGGCCCAGCCCCTGAGGAGGCTCCTGACTATCCTCCAGCTCCCCACCTCCCAGAGGAGCTCAGCTAGACTCCTCTGCTCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR CCA 90 bp | GTGTCAGCAAGAAGTAGGAGGTTGGTACACTGGAGGCCAAGGGGCTaGCCTGGGACGGCTGCCGCTTCAACCTCCACAGGATGCGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: VSARSRRLVHWRPRG*PGTAAASTSTGCGQ Trigger: CTGACCGCATCCTGTGGAGGTTGAAGCGGCAGCCGTCCCAGGCCAGCCCCTTGGCCTCCAGTGTACCAACCTCCTACTTCTTGCTGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
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| 3UTR GCA 90 bp | CTCCACCTGTCCACTCTCAGGAAAGGGCAGGTGGGGACATGCAGCTaGACTCACCTGCAGAAGCTAACCTTAGGCCCTAGGACTTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: LHLSTLRKGQVGTCS*THLQKLTLGPRTSW Trigger: CCAGGAAGTCCTAGGGCCTAAGGTTAGCTTCTGCAGGTGAGTGCAGCTGCATGTCCCCACCTGCCCTTTCCTGAGAGTGGACAGGTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR CCA 90 bp | CATGTGGCTGACATAGTTCTTCAGTGTCAGCAAGAAGTAGGAGGTTaGTACACTGGAGGCCAAGGGGCTGGCCTGGGACGGCTGCCGCTT | + |
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Preference number: 1 (lower is better) Translates to: HVADIVLQCQQEVGG*YTGGQGAGLGRLPL Trigger: AAGCGGCAGCCGTCCCAGGCCAGCCCCTTGGCCTCCAGTGTACCAACCTCCTACTTCTTGCTGACACTGAAGAACTATGTCAGCCACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
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| 3UTR CCA 90 bp | TCTCACTGGTGTCATAGTTGTTGGAGTGACGGTCAAACTTGTAGGTaGGTGGGAAGAGCAGCGGGCCTTCCTGGAACTCGCGGAGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: SHWCHSCWSDGQTCR*VGRAAGLPGTRGAA Trigger: AGCTGCTCCGCGAGTTCCAGGAAGGCCCGCTGCTCTTCCCACCCACCTACAAGTTTGACCGTCACTCCAACAACTATGACACCAGTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
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| 3UTR CCA 90 bp | TGGCTTCCAGCTCTAGCCTCCGCCCTGGATTCATTCACTTCCATCTaGGCTCAGATCTGTGGCTCAGGCTCATACAGTGTGTCCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: WLPALASALDSFTSI*AQICGSGSYSVSSL Trigger: GAGAGAGGACACACTGTATGAGCCTGAGCCACAGATCTGAGCCCAGATGGAAGTGAATGAATCCAGGGCGGAGGCTAGAGCTGGAAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
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| 3UTR GCA 90 bp | GGATCTCAGAGTCTCTGCTCATCCCCGTGGGGACAAACCATGAGATaGCAAGAATTTGGAACCCAGTGCTGTTCGTGCCACCCAACTGAC | + |
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Preference number: 1 (lower is better) Translates to: GSQSLCSSPWGQTMR*QEFGTQCCSCHPTD Trigger: GTCAGTTGGGTGGCACGAACAGCACTGGGTTCCAAATTCTTGGCATCTCATGGTTTGTCCCCACGGGGATGAGCAGAGACTCTGAGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR TCA 90 bp | CCCGGTGGCTCCCAAGATAGAATACAGACCCTGGAGCAACTGGAGTaGCTCTTAGGTTACAGGATGGACGTGAGCATTACAGGGCAAGAC | + |
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Preference number: 1 (lower is better) Translates to: PGGSQDRIQTLEQLE*LLGYRMDVSITGQD Trigger: GTCTTGCCCTGTAATGCTCACGTCCATCCTGTAACCTAAGAGTCACTCCAGTTGCTCCAGGGTCTGTATTCTATCTTGGGAGCCACCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR GCA 90 bp | GGACAAACCATGAGATGCCAAGAATTTGGAACCCAGTGCTGTTCGTaGCACCCAACTGACAGGGCCTGTACAAATGTGAACGTCCCCCTC | + |
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Preference number: 1 (lower is better) Translates to: GQTMRCQEFGTQCCS*HPTDRACTNVNVPL Trigger: GAGGGGGACGTTCACATTTGTACAGGCCCTGTCAGTTGGGTGGCACGAACAGCACTGGGTTCCAAATTCTTGGCATCTCATGGTTTGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR GCA 90 bp | TCCCCGTGGGGACAAACCATGAGATGCCAAGAATTTGGAACCCAGTaGTGTTCGTGCCACCCAACTGACAGGGCCTGTACAAATGTGAAC | + |
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Preference number: 1 (lower is better) Translates to: SPWGQTMRCQEFGTQ*CSCHPTDRACTNVN Trigger: GTTCACATTTGTACAGGCCCTGTCAGTTGGGTGGCACGAACAGCACTGGGTTCCAAATTCTTGGCATCTCATGGTTTGTCCCCACGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR CCA 90 bp | GTCGTTCTCCATGGTCCACAGGTGTTCAGGCATCATAGTGATCAGTaGGACAGACATCAGTGGGTTCAGCTCCAAGTCAAAGGTGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: VVLHGPQVFRHHSDQ*DRHQWVQLQVKGAS Trigger: ACTGGCACCTTTGACTTGGAGCTGAACCCACTGATGTCTGTCCCACTGATCACTATGATGCCTGAACACCTGTGGACCATGGAGAACGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
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| 3UTR CCA 90 bp | AGCCTCCGCCCTGGATTCATTCACTTCCATCTGGGCTCAGATCTGTaGCTCAGGCTCATACAGTGTGTCCTCTCTCAAAAAGGAGCGAAT | + |
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Preference number: 1 (lower is better) Translates to: SLRPGFIHFHLGSDL*LRLIQCVLSQKGAN Trigger: ATTCGCTCCTTTTTGAGAGAGGACACACTGTATGAGCCTGAGCCACAGATCTGAGCCCAGATGGAAGTGAATGAATCCAGGGCGGAGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
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| 3UTR TCA 90 bp | TCCAGAGTAGAGATGGACATTACACTACTGTCACAGTGCTTCAGCTaGAAGCAGGGATCTCAGAGTCTCTGCTCATCCCCGTGGGGACAA | + |
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Preference number: 1 (lower is better) Translates to: SRVEMDITLLSQCFS*KQGSQSLCSSPWGQ Trigger: TTGTCCCCACGGGGATGAGCAGAGACTCTGAGATCCCTGCTTTCAGCTGAAGCACTGTGACAGTAGTGTAATGTCCATCTCTACTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR TCA 90 bp | GGCCTTCCTGGAACTCGCGGAGCAGCTGGTCATTTTTCTTGGCAATaGAGAGCTGATCTTTCTCCCACAGCTCTTTGTAGTACTTCCTCG | + |
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Preference number: 1 (lower is better) Translates to: GLPGTRGAAGHFSWQ*RADLSPTALCSTSS Trigger: CGAGGAAGTACTACAAAGAGCTGTGGGAGAAAGATCAGCTCTTCATTGCCAAGAAAAATGACCAGCTGCTCCGCGAGTTCCAGGAAGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
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| 3UTR TCA 90 bp | TGGTACTTGGCAAAGACCAGTAAGAGAAGCCCCTGCATACGGACTTaGGAGATCTTGACAAAGTTCAGTGGGGAAAGCATATCCATGAAG | + |
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Preference number: 1 (lower is better) Translates to: WYLAKTSKRSPCIRT*EILTKFSGESISMK Trigger: CTTCATGGATATGCTTTCCCCACTGAACTTTGTCAAGATCTCTCAAGTCCGTATGCAGGGGCTTCTCTTACTGGTCTTTGCCAAGTACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
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| 3UTR CCA 90 bp | TCCTCAATTCGAAAGTTCATGTCTCCAAACCACAGAATGAGGTCATaGTCCAGGATGTTGGGGACATCATATCCCTCAAAAGTCAGACTC | + |
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Preference number: 1 (lower is better) Translates to: SSIRKFMSPNHRMRS*SRMLGTSYPSKVRL Trigger: GAGTCTGACTTTTGAGGGATATGATGTCCCCAACATCCTGGACCATGACCTCATTCTGTGGTTTGGAGACATGAACTTTCGAATTGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
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| 3UTR CCA 90 bp | AGAAATGGCATGCAAGCTAGTGGAAGCAAGCAAGTCTATATGCAGTaGACCGTCTCCAAGTCTTCACTATTGACACACTACTCTGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: RNGMQASGSKQVYMQ*TVSKSSLLTHYSVS Trigger: TGAAACAGAGTAGTGTGTCAATAGTGAAGACTTGGAGACGGTCCACTGCATATAGACTTGCTTGCTTCCACTAGCTTGCATGCCATTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGGAGGATAGTCAGGAGCCTCCTCAGGGGCTGGGCCAGACCCAGCGCTGCGTGCTGAAGCAGAGCTaGCTTCCAGCTCTAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: ELEDSQEPPQGLGQTQRCVLKQS*LPALAS Trigger: GGAGGCTAGAGCTGGAAGCCAGCTCTGCTTCAGCAC...GCAGCGCTGGGTCTGGCCCAGCCCCTGAGGAGGCTCCTGACTATCCTCCAGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006286.9 ENSMUST00000139856.2 ENSMUST00000150857.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGAAGAGGCACTGAGTCACTGTTGGCAGGAACAGGGACAGGCCATATCCACGGGCAGGTGGGGACATaGAGCTGCACTCACCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GRRGTESLLAGTGTGHIHGQVGT*SCTHLQ Trigger: CTGCAGGTGAGTGCAGCTGCATGTCCCCACCTGCCC...GTGGATATGGCCTGTCCCTGTTCCTGCCAACAGTGACTCAGTGCCTCTTCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR-3UTR CCA 90 bp | AGAACAGACAGCCACAGCTCACTAGAAGCCTGGGGGCTTATTCTTAACACCCGGGCCAAGGGGCTGGCCTaGGACGGCTGCCGCTTCAAC | + |
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Preference number: 2 (lower is better) Translates to: RTDSHSSLEAWGLILNTRAKGLA*DGCRFN Trigger: GTTGAAGCGGCAGCCGTCCCAGGCCAGCCCCTTGGC...CCGGGTGTTAAGAATAAGCCCCCAGGCTTCTAGTGAGCTGTGGCTGTCTGTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
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| 3UTR-3UTR TCA 90 bp | GCACTGAGTCACTGTTGGCAGGAACAGGGACAGGCCATATCCACATGGCTCCCACAGGGCAAGACTCCCTaGGGTGTCTTCTCCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: ALSHCWQEQGQAISTWLPQGKTP*GVFSWE Trigger: CTCCCAGGAGAAGACACCTCAGGGAGTCTTGCCCTG...TGGGAGCCATGTGGATATGGCCTGTCCCTGTTCCTGCCAACAGTGACTCAGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGAAGAGGCACTGAGTCACTGTTGGCAGGAACAGGGACAGGCCATATCCACTCAACCTCCACAGGATaGGGTCAGTCCACGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: GRRGTESLLAGTGTGHIHSTSTG*GQSTQA Trigger: AGCCTGCGTGGACTGACCGCATCCTGTGGAGGTTGA...GTGGATATGGCCTGTCCCTGTTCCTGCCAACAGTGACTCAGTGCCTCTTCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
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| 3UTR-3UTR TCA 90 bp | AATTTGGAACCCAGTGCTGTTCGTGCCACCCAACTGACAGGGCCTGTACAAATGAGTCCCAGGAGCTGCTaGGGAACTCTGGGGTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: NLEPSAVRATQLTGPVQMSPRSC*GTLGWR Trigger: CCTCCACCCCAGAGTTCCTCAGCAGCTCCTGGGACT...CATTTGTACAGGCCCTGTCAGTTGGGTGGCACGAACAGCACTGGGTTCCAAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
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| 3UTR-3UTR GCA 90 bp | GGCATGCAAGCTAGTGGAAGCAAGCAAGTCTATATGCAGTGGACCGTCTCCAAGGGGCAGGTGGGGACATaGAGCTGCACTCACCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GMQASGSKQVYMQWTVSKGQVGT*SCTHLQ Trigger: CTGCAGGTGAGTGCAGCTGCATGTCCCCACCTGCCC...CTTGGAGACGGTCCACTGCATATAGACTTGCTTGCTTCCACTAGCTTGCATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR-3UTR CCA 90 bp | AGAACAGACAGCCACAGCTCACTAGAAGCCTGGGGGCTTATTCTTAACACCCGGTGGGAGGTGGGGAGCTaGAGGATAGTCAGGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: RTDSHSSLEAWGLILNTRWEVGS*RIVRSL Trigger: GAGGCTCCTGACTATCCTCCAGCTCCCCACCTCCCA...CCGGGTGTTAAGAATAAGCCCCCAGGCTTCTAGTGAGCTGTGGCTGTCTGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR-3UTR CCA 90 bp | GCACTGAGTCACTGTTGGCAGGAACAGGGACAGGCCATATCCACATGGCTCCCACCAGTTCCTCTGGCCTaGAGAGAGCAGAGGAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: ALSHCWQEQGQAISTWLPPVPLA*REQRSL Trigger: TAGACTCCTCTGCTCTCTCCAGGCCAGAGGAACTGG...TGGGAGCCATGTGGATATGGCCTGTCCCTGTTCCTGCCAACAGTGACTCAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR-3UTR CCA 90 bp | GGGATCTCAGAGTCTCTGCTCATCCCCGTGGGGACAAACCATGAGATGCCAAGATCAGGAAAGGGCAGGTaGGGACATGCAGCTGCACTC | + |
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Preference number: 2 (lower is better) Translates to: GISESLLIPVGTNHEMPRSGKGR*GHAAAL Trigger: GAGTGCAGCTGCATGTCCCCACCTGCCCTTTCCTGA...TCTTGGCATCTCATGGTTTGTCCCCACGGGGATGAGCAGAGACTCTGAGATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGCTCACTAGAAGCCTGGGGGCTTATTCTTAACACCCGGTGGCTCCCAAGAAGAGGTTGGTGGCTATaGCTCCTCCTCCACCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: HSSLEAWGLILNTRWLPRRGWWL*LLLHLS Trigger: GGACAGGTGGAGGAGGAGCCATAGCCACCAACCTCT...TCTTGGGAGCCACCGGGTGTTAAGAATAAGCCCCCAGGCTTCTAGTGAGCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR-3UTR CCA 90 bp | GGGATCTCAGAGTCTCTGCTCATCCCCGTGGGGACAAACCATGAGATGCCAAGAGACCACCCTAGAGGTTaGTGGCTATGGCTCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: GISESLLIPVGTNHEMPRDHPRG*WLWLLL Trigger: GAGGAGGAGCCATAGCCACCAACCTCTAGGGTGGTC...TCTTGGCATCTCATGGTTTGTCCCCACGGGGATGAGCAGAGACTCTGAGATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR-3UTR GCA 90 bp | CCGCTAGGTCCTCCAAAATGTCTTGCACCTAGTTCCTCTGCTGCTTCCCACTTCGTGGGGACATGCAGCTaGACTCACCTGCAGAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: PLGPPKCLAPSSSAASHFVGTCS*THLQKL Trigger: TAGCTTCTGCAGGTGAGTGCAGCTGCATGTCCCCAC...GAAGTGGGAAGCAGCAGAGGAACTAGGTGCAAGACATTTTGGAGGACCTAGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR-3UTR CCA 90 bp | GGCATGCAAGCTAGTGGAAGCAAGCAAGTCTATATGCAGTGGACCGTCTCCAAGGTGCTGAAGCAGAGCTaGCTTCCAGCTCTAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: GMQASGSKQVYMQWTVSKVLKQS*LPALAS Trigger: GGAGGCTAGAGCTGGAAGCCAGCTCTGCTTCAGCAC...CTTGGAGACGGTCCACTGCATATAGACTTGCTTGCTTCCACTAGCTTGCATGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR-3UTR CCA 90 bp | AATTTGGAACCCAGTGCTGTTCGTGCCACCCAACTGACAGGGCCTGTACAAATGTCAGGAAAGGGCAGGTaGGGACATGCAGCTGCACTC | + |
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Preference number: 2 (lower is better) Translates to: NLEPSAVRATQLTGPVQMSGKGR*GHAAAL Trigger: GAGTGCAGCTGCATGTCCCCACCTGCCCTTTCCTGA...CATTTGTACAGGCCCTGTCAGTTGGGTGGCACGAACAGCACTGGGTTCCAAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR-3UTR CCA 90 bp | AATTTGGAACCCAGTGCTGTTCGTGCCACCCAACTGACAGGGCCTGTACAAATGGGTCAAACTTGTAGGTaGGTGGGAAGAGCAGCGGGC | + |
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Preference number: 2 (lower is better) Translates to: NLEPSAVRATQLTGPVQMGQTCR*VGRAAG Trigger: GCCCGCTGCTCTTCCCACCCACCTACAAGTTTGACC...CATTTGTACAGGCCCTGTCAGTTGGGTGGCACGAACAGCACTGGGTTCCAAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGCTCACTAGAAGCCTGGGGGCTTATTCTTAACACCCGGTGGCTCCCAAGATCACAGTGCTTCAGCTaGAAGCAGGGATCTCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: HSSLEAWGLILNTRWLPRSQCFS*KQGSQS Trigger: ACTCTGAGATCCCTGCTTTCAGCTGAAGCACTGTGA...TCTTGGGAGCCACCGGGTGTTAAGAATAAGCCCCCAGGCTTCTAGTGAGCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGCTCACTAGAAGCCTGGGGGCTTATTCTTAACACCCGGTGGCTCCCAAGACTGGAGCAACTGGAGTaGCTCTTAGGTTACAGGATG | + |
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Preference number: 2 (lower is better) Translates to: HSSLEAWGLILNTRWLPRLEQLE*LLGYRM Trigger: CATCCTGTAACCTAAGAGTCACTCCAGTTGCTCCAG...TCTTGGGAGCCACCGGGTGTTAAGAATAAGCCCCCAGGCTTCTAGTGAGCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTTGCACCTAGTTCCTCTGCTGCTTCCCACTTCTAGGTCCAGCAGGGCCCAGGGACTTGAGAGATCTTaGCAAAGTTCAGTGGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: VLHLVPLLLPTSRSSRAQGLERS*QSSVGK Trigger: TTTCCCCACTGAACTTTGTCAAGATCTCTCAAGTCC...CTGGGCCCTGCTGGACCTAGAAGTGGGAAGCAGCAGAGGAACTAGGTGCAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAGATGCCAAGAATTTGGAACCCAGTGCTGTTCGTGCCACCCAACTGACAGGAGGAATGCAGGCCTGTaGCAGATAGGGCATGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: MRCQEFGTQCCSCHPTDRRNAGL*QIGHVP Trigger: AGGCACATGCCCTATCTGGCACAGGCCTGCATTCCT...CCTGTCAGTTGGGTGGCACGAACAGCACTGGGTTCCAAATTCTTGGCATCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR-3UTR CCA 90 bp | AACACACAGAGAACAGACAGCCACAGCTCACTAGAAGCCTGGGGGCTTATTCTTGCACTGAGTCACTGTTaGCAGGAACAGGGACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: NTQRTDSHSSLEAWGLILALSHC*QEQGQA Trigger: GGCCTGTCCCTGTTCCTGCCAACAGTGACTCAGTGC...AAGAATAAGCCCCCAGGCTTCTAGTGAGCTGTGGCTGTCTGTTCTCTGTGTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAAGAGGCACTGAGTCACTGTTGGCAGGAACAGGGACAGGCCATATCCACAACTCGCGGAGCAGCTaGTCATTTTTCTTGGCAATG | + |
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Preference number: 2 (lower is better) Translates to: GRRGTESLLAGTGTGHIHNSRSS*SFFLAM Trigger: CATTGCCAAGAAAAATGACCAGCTGCTCCGCGAGTT...GTGGATATGGCCTGTCCCTGTTCCTGCCAACAGTGACTCAGTGCCTCTTCTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGTGTTCCAGGCGCTGGTCATTGTTATACATATGAGGAGGCAGGTGGCAATTTGGGAGGTGGGGAGCTaGAGGATAGTCAGGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: KVFQALVIVIHMRRQVAIWEVGS*RIVRSL Trigger: GAGGCTCCTGACTATCCTCCAGCTCCCCACCTCCCA...AATTGCCACCTGCCTCCTCATATGTATAACAATGACCAGCGCCTGGAACACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
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| 3UTR-3UTR CCA 90 bp | ATGAGATGCCAAGAATTTGGAACCCAGTGCTGTTCGTGCCACCCAACTGACAGGGATAGGGCATGTGCCTaGCACGACTGCTTGAATGTG | + |
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Preference number: 2 (lower is better) Translates to: MRCQEFGTQCCSCHPTDRDRACA*HDCLNV Trigger: CACATTCAAGCAGTCGTGCCAGGCACATGCCCTATC...CCTGTCAGTTGGGTGGCACGAACAGCACTGGGTTCCAAATTCTTGGCATCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR-3UTR CCA 90 bp | GGCATGCAAGCTAGTGGAAGCAAGCAAGTCTATATGCAGTGGACCGTCTCCAAGGATAGGGCATGTGCCTaGCACGACTGCTTGAATGTG | + |
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Preference number: 2 (lower is better) Translates to: GMQASGSKQVYMQWTVSKDRACA*HDCLNV Trigger: CACATTCAAGCAGTCGTGCCAGGCACATGCCCTATC...CTTGGAGACGGTCCACTGCATATAGACTTGCTTGCTTCCACTAGCTTGCATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGAAGCTAACCTTAGGCCCTAGGACTTCCTGGTCAGATCCACTCTCCAGACACAGAATGAGGTCATaGTCCAGGATGTTGGGGACA | + |
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Preference number: 2 (lower is better) Translates to: LQKLTLGPRTSWSDPLSRHRMRS*SRMLGT Trigger: TGTCCCCAACATCCTGGACCATGACCTCATTCTGTG...TCTGGAGAGTGGATCTGACCAGGAAGTCCTAGGGCCTAAGGTTAGCTTCTGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAAGAGGCACTGAGTCACTGTTGGCAGGAACAGGGACAGGCCATATCCACTGGTGTCATAGTTGTTaGAGTGACGGTCAAACTTGT | + |
|
Preference number: 2 (lower is better) Translates to: GRRGTESLLAGTGTGHIHWCHSC*SDGQTC Trigger: ACAAGTTTGACCGTCACTCCAACAACTATGACACCA...GTGGATATGGCCTGTCCCTGTTCCTGCCAACAGTGACTCAGTGCCTCTTCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR-3UTR TCA 90 bp | ATAATTAACCTCCAATATGACAACACACAGAGAACAGACAGCCACAGCTCACTACGCTGCTGGCAGTGCTaGAGCAGAGCTGGCTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: IINLQYDNTQRTDSHSSLRCWQC*SRAGFQ Trigger: CTGGAAGCCAGCTCTGCTTCAGCACTGCCAGCAGCG...TAGTGAGCTGTGGCTGTCTGTTCTCTGTGTGTTGTCATATTGGAGGTTAATTAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCCAAGTCTTCACTATTGACACACTACTCTGTTTCAATCACATCTCTGTAACAGCAGAGGAGTCTAGCTaGGCTCCTCTGGGAGGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: LQVFTIDTLLCFNHISVTAEESS*APLGGG Trigger: CCCACCTCCCAGAGGAGCTCAGCTAGACTCCTCTGC...TGTTACAGAGATGTGATTGAAACAGAGTAGTGTGTCAATAGTGAAGACTTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAACAGACAGCCACAGCTCACTAGAAGCCTGGGGGCTTATTCTTAACACCCGGCCAAGTCTTCACTATTaGCACACTACTCTGTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: RTDSHSSLEAWGLILNTRPSLHY*HTTLFQ Trigger: TTGAAACAGAGTAGTGTGTCAATAGTGAAGACTTGG...CCGGGTGTTAAGAATAAGCCCCCAGGCTTCTAGTGAGCTGTGGCTGTCTGTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCATATTTATAATTAACCTCCAATATGACAACACACAGAGAACAGACAGCCACGCTTCAGGCAGACGTTaGCTCCCCCTTTGTTCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: AIFIINLQYDNTQRTDSHASGRR*LPLCSP Trigger: GGGGGAACAAAGGGGGAGTCAACGTCTGCCTGAAGC...GTGGCTGTCTGTTCTCTGTGTGTTGTCATATTGGAGGTTAATTATAAATATGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAATTAACCTCCAATATGACAACACACAGAGAACAGACAGCCACAGCTCACTAAGAGGTTGGTGGCTATaGCTCCTCCTCCACCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: IINLQYDNTQRTDSHSSLRGWWL*LLLHLS Trigger: GGACAGGTGGAGGAGGAGCCATAGCCACCAACCTCT...TAGTGAGCTGTGGCTGTCTGTTCTCTGTGTGTTGTCATATTGGAGGTTAATTAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
||
| 3UTR CAA 90 bp | AAGTTCATGTCTCCAAACCACAGAATGAGGTCATGGTCCAGGATGTaGGGGACATCATATCCCTCAAAAGTCAGACTCTCCAAGATTCGG | + |
|
Preference number: 2 (lower is better) Translates to: KFMSPNHRMRSWSRM*GTSYPSKVRLSKIR Trigger: CCGAATCTTGGAGAGTCTGACTTTTGAGGGATATGATGTCCCCAACATCCTGGACCATGACCTCATTCTGTGGTTTGGAGACATGAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR-3UTR CCA 90 bp | AACACACAGAGAACAGACAGCCACAGCTCACTAGAAGCCTGGGGGCTTATTCTTGCAAATGCTGGTACTTaGCAAAGACCAGTAAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: NTQRTDSHSSLEAWGLILANAGT*QRPVRE Trigger: TTCTCTTACTGGTCTTTGCCAAGTACCAGCATTTGC...AAGAATAAGCCCCCAGGCTTCTAGTGAGCTGTGGCTGTCTGTTCTCTGTGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCAGATCCACTCTCCAGAGTAGAGATGGACATTACACTACTGTCACAGTGCTTCATGGTCCAGGATGTTaGGGACATCATATCCCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: VRSTLQSRDGHYTTVTVLHGPGC*GHHIPQ Trigger: TTGAGGGATATGATGTCCCCAACATCCTGGACCATG...AAGCACTGTGACAGTAGTGTAATGTCCATCTCTACTCTGGAGAGTGGATCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAATTAACCTCCAATATGACAACACACAGAGAACAGACAGCCACAGCTCACTAAAACTTGTAGGTGGGTaGGAAGAGCAGCGGGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: IINLQYDNTQRTDSHSSLKLVGG*EEQRAF Trigger: GAAGGCCCGCTGCTCTTCCCACCCACCTACAAGTTT...TAGTGAGCTGTGGCTGTCTGTTCTCTGTGTGTTGTCATATTGGAGGTTAATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR CAA 90 bp | ACTGATGTTGATATACACCTGGTTTGGGTTGTTACCATAGGAGACTaGGTTGTCGCCGACCCAGACATAGGCTACATAGTCATTAATGTG | + |
|
Preference number: 2 (lower is better) Translates to: TDVDIHLVWVVTIGD*VVADPDIGYIVINV Trigger: CACATTAATGACTATGTAGCCTATGTCTGGGTCGGCGACAACCAAGTCTCCTATGGTAACAACCCAAACCAGGTGTATATCAACATCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR-3UTR TCA 90 bp | TCAGATCCACTCTCCAGAGTAGAGATGGACATTACACTACTGTCACAGTGCTTCCCAAGTCTTCACTATTaGCACACTACTCTGTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: SDPLSRVEMDITLLSQCFPSLHY*HTTLFQ Trigger: TTGAAACAGAGTAGTGTGTCAATAGTGAAGACTTGG...GAAGCACTGTGACAGTAGTGTAATGTCCATCTCTACTCTGGAGAGTGGATCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
||
| 3UTR-3UTR CCA 90 bp | AGATCCACTCTCCAGAGTAGAGATGGACATTACACTACTGTCACAGTGCTTCAGCTTGACAAAGTTCAGTaGGGAAAGCATATCCATGAA | + |
|
Preference number: 2 (lower is better) Translates to: RSTLQSRDGHYTTVTVLQLDKVQ*GKHIHE Trigger: TTCATGGATATGCTTTCCCCACTGAACTTTGTCAAG...CTGAAGCACTGTGACAGTAGTGTAATGTCCATCTCTACTCTGGAGAGTGGATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR CCA 72 bp | AGAAGTAGGAGGTTGGTACACTGGAGGCCAAGGGGCTaGCCTGGGACGGCTGCCGCTTCAACCTCCACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RSRRLVHWRPRG*PGTAAASTSTG Trigger: TCCTGTGGAGGTTGAAGCGGCAGCCGTCCCAGGCCAGCCCCTTGGCCTCCAGTGTACCAACCTCCTACTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGGCAGCCTGAGGCCCAGGATGGTGTGATAGGAATGCAGGCCTGTGCCAGAAGCTTCAGGCAGACGTaGACTCCCCCTTTGTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: PRQPEAQDGVIGMQACARSFRQT*TPPLFP Trigger: GGGGAACAAAGGGGGAGTCAACGTCTGCCTGAAGCT...TCTGGCACAGGCCTGCATTCCTATCACACCATCCTGGGCCTCAGGCTGCCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR CCA 72 bp | TCTTCAGTGTCAGCAAGAAGTAGGAGGTTGGTACACTaGAGGCCAAGGGGCTGGCCTGGGACGGCTGCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: SSVSARSRRLVH*RPRGWPGTAAA Trigger: AGCGGCAGCCGTCCCAGGCCAGCCCCTTGGCCTCCAGTGTACCAACCTCCTACTTCTTGCTGACACTGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR GCA 72 bp | TCCACTCTCAGGAAAGGGCAGGTGGGGACATGCAGCTaGACTCACCTGCAGAAGCTAACCTTAGGCCCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: STLRKGQVGTCS*THLQKLTLGPR Trigger: CCTAGGGCCTAAGGTTAGCTTCTGCAGGTGAGTGCAGCTGCATGTCCCCACCTGCCCTTTCCTGAGAGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
||
| 3UTR GCA 72 bp | CACCTGTCCACTCTCAGGAAAGGGCAGGTGGGGACATaGAGCTGCACTCACCTGCAGAAGCTAACCTTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: HLSTLRKGQVGT*SCTHLQKLTLG Trigger: GCCTAAGGTTAGCTTCTGCAGGTGAGTGCAGCTGCATGTCCCCACCTGCCCTTTCCTGAGAGTGGACAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
||
| 3UTR CCA 72 bp | CACTGTTGGCAGGAACAGGGACAGGCCATATCCACATaGCTCCCAGAGAGTGCTGAGGCTTCTTCTTGCCGC | + |
|
Preference number: 3 (lower is better) Translates to: HCWQEQGQAIST*LPESAEASSCR Trigger: GCGGCAAGAAGAAGCCTCAGCACTCTCTGGGAGCCATGTGGATATGGCCTGTCCCTGTTCCTGCCAACAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCATATCCACATGGCTCCCAGAGAGTGCTGAGGCTTCTTCTTGCCGCTAGGGGGAGGAGCAGTGCTTaGCCAGTGAAGATGAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: RPYPHGSQRVLRLLLAARGRSSA*PVKMSM Trigger: CATGCTCATCTTCACTGGCAAAGCACTGCTCCTCCC...CCTAGCGGCAAGAAGAAGCCTCAGCACTCTCTGGGAGCCATGTGGATATGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
||
| 3UTR CCA 72 bp | GACATAGTTCTTCAGTGTCAGCAAGAAGTAGGAGGTTaGTACACTGGAGGCCAAGGGGCTGGCCTGGGACGG | + |
|
Preference number: 3 (lower is better) Translates to: DIVLQCQQEVGG*YTGGQGAGLGR Trigger: CCGTCCCAGGCCAGCCCCTTGGCCTCCAGTGTACCAACCTCCTACTTCTTGCTGACACTGAAGAACTATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR TCA 72 bp | GGGACAGGCCATATCCACATGGCTCCCAGAGAGTGCTaGGGCTTCTTCTTGCCGCTAGGTCCTCCAAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: GTGHIHMAPREC*GFFLPLGPPKC Trigger: ACATTTTGGAGGACCTAGCGGCAAGAAGAAGCCTCAGCACTCTCTGGGAGCCATGTGGATATGGCCTGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
||
| 3UTR CCA 72 bp | TGTCATAGTTGTTGGAGTGACGGTCAAACTTGTAGGTaGGTGGGAAGAGCAGCGGGCCTTCCTGGAACTCGC | + |
|
Preference number: 3 (lower is better) Translates to: CHSCWSDGQTCR*VGRAAGLPGTR Trigger: GCGAGTTCCAGGAAGGCCCGCTGCTCTTCCCACCCACCTACAAGTTTGACCGTCACTCCAACAACTATGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGGAACAGGGACAGGCCATATCCACATGGCTCCCAGAGAGTGCTGAGGCTTGGCAAATGCTGGTACTaGGCAAAGACCAGTAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GRNRDRPYPHGSQRVLRLGKCWY*AKTSKR Trigger: TCTCTTACTGGTCTTTGCCAAGTACCAGCATTTGCC...AAGCCTCAGCACTCTCTGGGAGCCATGTGGATATGGCCTGTCCCTGTTCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR GCA 72 bp | AGTCTCTGCTCATCCCCGTGGGGACAAACCATGAGATaGCAAGAATTTGGAACCCAGTGCTGTTCGTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLCSSPWGQTMR*QEFGTQCCSCH Trigger: GTGGCACGAACAGCACTGGGTTCCAAATTCTTGGCATCTCATGGTTTGTCCCCACGGGGATGAGCAGAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
||
| 3UTR CCA 72 bp | ACACAGAGAACAGACAGCCACAGCTCACTAGAAGCCTaGGGGCTTATTCTTAACACCCGGTGGCTCCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TQRTDSHSSLEA*GLILNTRWLPR Trigger: TCTTGGGAGCCACCGGGTGTTAAGAATAAGCCCCCAGGCTTCTAGTGAGCTGTGGCTGTCTGTTCTCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
||
| 3UTR GCA 72 bp | GGACAAACCATGAGATGCCAAGAATTTGGAACCCAGTaGTGTTCGTGCCACCCAACTGACAGGGCCTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: GQTMRCQEFGTQ*CSCHPTDRACT Trigger: TGTACAGGCCCTGTCAGTTGGGTGGCACGAACAGCACTGGGTTCCAAATTCTTGGCATCTCATGGTTTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
||
| 3UTR CCA 72 bp | ACAAAAACCTGTATTAAAGGGCCAGTTCCTCTGGCCTaGAGAGAGCAGAGGAGTCTAGCTGAGCTCCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TKTCIKGPVPLA*REQRSLAELLW Trigger: CCAGAGGAGCTCAGCTAGACTCCTCTGCTCTCTCCAGGCCAGAGGAACTGGCCCTTTAATACAGGTTTTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
||
| 3UTR TCA 72 bp | GAGATGGACATTACACTACTGTCACAGTGCTTCAGCTaGAAGCAGGGATCTCAGAGTCTCTGCTCATCCCCG | + |
|
Preference number: 3 (lower is better) Translates to: EMDITLLSQCFS*KQGSQSLCSSP Trigger: CGGGGATGAGCAGAGACTCTGAGATCCCTGCTTTCAGCTGAAGCACTGTGACAGTAGTGTAATGTCCATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
||
| 3UTR CCA 72 bp | CACCTGCAGAAGCTAACCTTAGGCCCTAGGACTTCCTaGTCAGATCCACTCTCCAGAGTAGAGATGGACATT | + |
|
Preference number: 3 (lower is better) Translates to: HLQKLTLGPRTS*SDPLSRVEMDI Trigger: AATGTCCATCTCTACTCTGGAGAGTGGATCTGACCAGGAAGTCCTAGGGCCTAAGGTTAGCTTCTGCAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
||
| 3UTR CCA 72 bp | TTCAGGCATCATAGTGATCAGTGGGACAGACATCAGTaGGTTCAGCTCCAAGTCAAAGGTGCCAGTGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: FRHHSDQWDRHQ*VQLQVKGASDR Trigger: CCTGTCACTGGCACCTTTGACTTGGAGCTGAACCCACTGATGTCTGTCCCACTGATCACTATGATGCCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTGACTTATCCCCACTACAGAGTGCAGGTTGTTGCTATAGTAACAGAGAAGAAGGCACTGAGTCACTGTaGGCAGGAACAGGGACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VDLSPLQSAGCCYSNREEGTESL*AGTGTG Trigger: GCCTGTCCCTGTTCCTGCCAACAGTGACTCAGTGCC...TTCTTCTCTGTTACTATAGCAACAACCTGCACTCTGTAGTGGGGATAAGTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR GCA 72 bp | GGTGCCAGTGACAGGCTTATGGTCACTGATGCTGTATaGCATGTGGCTGACATAGTTCTTCAGTGTCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GASDRLMVTDAV*HVADIVLQCQQ Trigger: TTGCTGACACTGAAGAACTATGTCAGCCACATGGCATACAGCATCAGTGACCATAAGCCTGTCACTGGCACC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR TCA 72 bp | GGAACTCGCGGAGCAGCTGGTCATTTTTCTTGGCAATaGAGAGCTGATCTTTCTCCCACAGCTCTTTGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: GTRGAAGHFSWQ*RADLSPTALCS Trigger: ACTACAAAGAGCTGTGGGAGAAAGATCAGCTCTTCATTGCCAAGAAAAATGACCAGCTGCTCCGCGAGTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR TCA 72 bp | TCCCAAGATAGAATACAGACCCTGGAGCAACTGGAGTaGCTCTTAGGTTACAGGATGGACGTGAGCATTACA | + |
|
Preference number: 3 (lower is better) Translates to: SQDRIQTLEQLE*LLGYRMDVSIT Trigger: TGTAATGCTCACGTCCATCCTGTAACCTAAGAGTCACTCCAGTTGCTCCAGGGTCTGTATTCTATCTTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
||
| 3UTR TCA 72 bp | TCTCTCAAAAAGGAGCGAATCGGGATCTTGAAGGGTTaGCTTATCCCCACTACAGAGTGCAGGTTGTTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SLKKERIGILKG*LIPTTECRLLL Trigger: TAGCAACAACCTGCACTCTGTAGTGGGGATAAGTCAACCCTTCAAGATCCCGATTCGCTCCTTTTTGAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR CCA 72 bp | CTGCATACGGACTTGAGAGATCTTGACAAAGTTCAGTaGGGAAAGCATATCCATGAAGAGACTGCTCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: LHTDLRDLDKVQ*GKHIHEETAPW Trigger: CCATGGAGCAGTCTCTTCATGGATATGCTTTCCCCACTGAACTTTGTCAAGATCTCTCAAGTCCGTATGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| 3UTR CCA 72 bp | ATGCAAGCTAGTGGAAGCAAGCAAGTCTATATGCAGTaGACCGTCTCCAAGTCTTCACTATTGACACACTAC | + |
|
Preference number: 3 (lower is better) Translates to: MQASGSKQVYMQ*TVSKSSLLTHY Trigger: GTAGTGTGTCAATAGTGAAGACTTGGAGACGGTCCACTGCATATAGACTTGCTTGCTTCCACTAGCTTGCAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000150857.8 |
||
| 3UTR GCA 72 bp | AGGGTTGACTTATCCCCACTACAGAGTGCAGGTTGTTaGTATAGTAACAGAGAAGAAACTGATCCTCAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RVDLSPLQSAGC*YSNREETDPQC Trigger: ACACTGAGGATCAGTTTCTTCTCTGTTACTATAGCAACAACCTGCACTCTGTAGTGGGGATAAGTCAACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGCCAGACCCAGCGCTGCTGGCAGTGCTGAAGCAGAGCTGGCTTCCAGCTGGAGGCCAAGGGGCTaGCCTGGGACGGCTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GWARPSAAGSAEAELASSWRPRG*PGTAAA Trigger: AGCGGCAGCCGTCCCAGGCCAGCCCCTTGGCCTCCA...GCTGGAAGCCAGCTCTGCTTCAGCACTGCCAGCAGCGCTGGGTCTGGCCCAGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
||
| CDS-3UTR TCA 90 bp | GGCTGGGCCAGACCCAGCGCTGCTGGCAGTGCTGAAGCAGAGCTGGCTTCCAGCAGTCCCAGGAGCTGCTaGGGAACTCTGGGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GWARPSAAGSAEAELASSSPRSC*GTLGWR Trigger: CCTCCACCCCAGAGTTCCTCAGCAGCTCCTGGGACT...GCTGGAAGCCAGCTCTGCTTCAGCACTGCCAGCAGCGCTGGGTCTGGCCCAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000139856.2 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGCCAGACCCAGCGCTGCTGGCAGTGCTGAAGCAGAGCTGGCTTCCAGCGCTGCTGAGGAACTCTaGGGTGGAGGTGTAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GWARPSAAGSAEAELASSAAEEL*GGGVAD Trigger: ATCAGCTACACCTCCACCCCAGAGTTCCTCAGCAGC...GCTGGAAGCCAGCTCTGCTTCAGCACTGCCAGCAGCGCTGGGTCTGGCCCAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000139856.2 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCTGGCTTCCAGCTCTAGCCTCCGCCCTGGATTCATTCACTTCCATCTGGCCAAGGGGCTGGCCTaGGACGGCTGCCGCTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: AELASSSSLRPGFIHFHLAKGLA*DGCRFN Trigger: GTTGAAGCGGCAGCCGTCCCAGGCCAGCCCCTTGGC...CAGATGGAAGTGAATGAATCCAGGGCGGAGGCTAGAGCTGGAAGCCAGCTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
||
| CDS-3UTR TCA 90 bp | GGCAGGAACAGGGACAGGCCATATCCACATGGCTCCCAGAGAGTGCTGAGGCTTAGTCCCAGGAGCTGCTaGGGAACTCTGGGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRNRDRPYPHGSQRVLRLSPRSC*GTLGWR Trigger: CCTCCACCCCAGAGTTCCTCAGCAGCTCCTGGGACT...AAGCCTCAGCACTCTCTGGGAGCCATGTGGATATGGCCTGTCCCTGTTCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
||
| CDS-3UTR TCA 90 bp | GAGGATAGTCAGGAGCCTCCTCAGGGGCTGGGCCAGACCCAGCGCTGCTGGCAGGGGATCTTGAAGGGTTaGCTTATCCCCACTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EDSQEPPQGLGQTQRCWQGILKG*LIPTTE Trigger: CTCTGTAGTGGGGATAAGTCAACCCTTCAAGATCCC...CTGCCAGCAGCGCTGGGTCTGGCCCAGCCCCTGAGGAGGCTCCTGACTATCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000139856.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTGCACCTAGTTCCTCTGCTGCTTCCCACTTCTAGGTCCAGCAGGGCCCAGAGGAGGTTGGTACACTaGAGGCCAAGGGGCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLHLVPLLLPTSRSSRAQRRLVH*RPRGWP Trigger: AGGCCAGCCCCTTGGCCTCCAGTGTACCAACCTCCT...CTGGGCCCTGCTGGACCTAGAAGTGGGAAGCAGCAGAGGAACTAGGTGCAAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
||
| CDS-3UTR TCA 90 bp | AGGATAGTCAGGAGCCTCCTCAGGGGCTGGGCCAGACCCAGCGCTGCTGGCAGTTCTTGGTTGTTCAGTTaGAGTAGGTCACTGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RIVRSLLRGWARPSAAGSSWLFS*SRSLRS Trigger: AGACCTCAGTGACCTACTTCAACTGAACAACCAAGA...ACTGCCAGCAGCGCTGGGTCTGGCCCAGCCCCTGAGGAGGCTCCTGACTATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
||
| CDS-3UTR CCA 90 bp | GAGGATAGTCAGGAGCCTCCTCAGGGGCTGGGCCAGACCCAGCGCTGCTGGCAGGCAAATGCTGGTACTTaGCAAAGACCAGTAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EDSQEPPQGLGQTQRCWQANAGT*QRPVRE Trigger: TTCTCTTACTGGTCTTTGCCAAGTACCAGCATTTGC...CTGCCAGCAGCGCTGGGTCTGGCCCAGCCCCTGAGGAGGCTCCTGACTATCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR CCA 90 bp | AGGATAGTCAGGAGCCTCCTCAGGGGCTGGGCCAGACCCAGCGCTGCTGGCAGTGATATACACCTGGTTTaGGTTGTTACCATAGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: RIVRSLLRGWARPSAAGSDIHLV*VVTIGD Trigger: GTCTCCTATGGTAACAACCCAAACCAGGTGTATATC...ACTGCCAGCAGCGCTGGGTCTGGCCCAGCCCCTGAGGAGGCTCCTGACTATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000139856.2 |
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| CDS-3UTR CCA 90 bp | GGACAGGCCATATCCACATGGCTCCCAGAGAGTGCTGAGGCTTCTTCTTGCCGCCACAGAATGAGGTCATaGTCCAGGATGTTGGGGACA | + |
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Preference number: 4 (lower is better) Translates to: GQAISTWLPESAEASSCRHRMRS*SRMLGT Trigger: TGTCCCCAACATCCTGGACCATGACCTCATTCTGTG...GCGGCAAGAAGAAGCCTCAGCACTCTCTGGGAGCCATGTGGATATGGCCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR CCA 90 bp | CCGCTAGGTCCTCCAAAATGTCTTGCACCTAGTTCCTCTGCTGCTTCCCACTTCAAACTTGTAGGTGGGTaGGAAGAGCAGCGGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: PLGPPKCLAPSSSAASHFKLVGG*EEQRAF Trigger: GAAGGCCCGCTGCTCTTCCCACCCACCTACAAGTTT...GAAGTGGGAAGCAGCAGAGGAACTAGGTGCAAGACATTTTGGAGGACCTAGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR CCA 90 bp | AGAACAGACAGCCACAGCTCACTAGAAGCCTGGGGGCTTATTCTTAACACCCGGGCTGCTGAGGAACTCTaGGGTGGAGGTGTAGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: RTDSHSSLEAWGLILNTRAAEEL*GGGVAD Trigger: ATCAGCTACACCTCCACCCCAGAGTTCCTCAGCAGC...CCGGGTGTTAAGAATAAGCCCCCAGGCTTCTAGTGAGCTGTGGCTGTCTGTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR CCA 90 bp | AGGCCATATCCACATGGCTCCCAGAGAGTGCTGAGGCTTCTTCTTGCCGCTAGGCATGGTCCAGGATGTTaGGGACATCATATCCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: RPYPHGSQRVLRLLLAARHGPGC*GHHIPQ Trigger: TTGAGGGATATGATGTCCCCAACATCCTGGACCATG...CCTAGCGGCAAGAAGAAGCCTCAGCACTCTCTGGGAGCCATGTGGATATGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR GCA 90 bp | GGGATCTCAGAGTCTCTGCTCATCCCCGTGGGGACAAACCATGAGATGCCAAGAGTCACTGATGCTGTATaGCATGTGGCTGACATAGTT | + |
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Preference number: 4 (lower is better) Translates to: GISESLLIPVGTNHEMPRVTDAV*HVADIV Trigger: AACTATGTCAGCCACATGGCATACAGCATCAGTGAC...TCTTGGCATCTCATGGTTTGTCCCCACGGGGATGAGCAGAGACTCTGAGATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR CCA 90 bp | GGCAGGAACAGGGACAGGCCATATCCACATGGCTCCCAGAGAGTGCTGAGGCTTCTTGACAAAGTTCAGTaGGGAAAGCATATCCATGAA | + |
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Preference number: 4 (lower is better) Translates to: GRNRDRPYPHGSQRVLRLLDKVQ*GKHIHE Trigger: TTCATGGATATGCTTTCCCCACTGAACTTTGTCAAG...AAGCCTCAGCACTCTCTGGGAGCCATGTGGATATGGCCTGTCCCTGTTCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR CCA 90 bp | TCAGATCCACTCTCCAGAGTAGAGATGGACATTACACTACTGTCACAGTGCTTCGGTCAAACTTGTAGGTaGGTGGGAAGAGCAGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: SDPLSRVEMDITLLSQCFGQTCR*VGRAAG Trigger: GCCCGCTGCTCTTCCCACCCACCTACAAGTTTGACC...GAAGCACTGTGACAGTAGTGTAATGTCCATCTCTACTCTGGAGAGTGGATCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR TCA 90 bp | ATAATTAACCTCCAATATGACAACACACAGAGAACAGACAGCCACAGCTCACTAGCTTCAGGCAGACGTTaGCTCCCCCTTTGTTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: IINLQYDNTQRTDSHSSLASGRR*LPLCSP Trigger: GGGGGAACAAAGGGGGAGTCAACGTCTGCCTGAAGC...TAGTGAGCTGTGGCTGTCTGTTCTCTGTGTGTTGTCATATTGGAGGTTAATTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR CCA 90 bp | ACAAACCATGAGATGCCAAGAATTTGGAACCCAGTGCTGTTCGTGCCACCCAACAACTCGCGGAGCAGCTaGTCATTTTTCTTGGCAATG | + |
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Preference number: 4 (lower is better) Translates to: TNHEMPRIWNPVLFVPPNNSRSS*SFFLAM Trigger: CATTGCCAAGAAAAATGACCAGCTGCTCCGCGAGTT...GTTGGGTGGCACGAACAGCACTGGGTTCCAAATTCTTGGCATCTCATGGTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| 3UTR CAA 72 bp | GATATACACCTGGTTTGGGTTGTTACCATAGGAGACTaGGTTGTCGCCGACCCAGACATAGGCTACATAGTC | + |
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Preference number: 4 (lower is better) Translates to: DIHLVWVVTIGD*VVADPDIGYIV Trigger: GACTATGTAGCCTATGTCTGGGTCGGCGACAACCAAGTCTCCTATGGTAACAACCCAAACCAGGTGTATATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150857.8 |
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| CDS-3UTR TCA 90 bp | CAGAGTCTCTGCTCATCCCCGTGGGGACAAACCATGAGATGCCAAGAATTTGGACATTTTTCTTGGCAATaGAGAGCTGATCTTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: QSLCSSPWGQTMRCQEFGHFSWQ*RADLSP Trigger: GGGAGAAAGATCAGCTCTTCATTGCCAAGAAAAATG...TCCAAATTCTTGGCATCTCATGGTTTGTCCCCACGGGGATGAGCAGAGACTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR GCA 90 bp | CTCCAAGTCTTCACTATTGACACACTACTCTGTTTCAATCACATCTCTGTAACAGTCTACAGTGGGGGCTaGGGAGGCCACATTCCACGT | + |
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Preference number: 4 (lower is better) Translates to: LQVFTIDTLLCFNHISVTVYSGG*GGHIPR Trigger: ACGTGGAATGTGGCCTCCGCAGCCCCCACTGTAGAC...TGTTACAGAGATGTGATTGAAACAGAGTAGTGTGTCAATAGTGAAGACTTGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR GCA 90 bp | ATAATTAACCTCCAATATGACAACACACAGAGAACAGACAGCCACAGCTCACTATCAACCTCCACAGGATaGGGTCAGTCCACGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: IINLQYDNTQRTDSHSSLSTSTG*GQSTQA Trigger: AGCCTGCGTGGACTGACCGCATCCTGTGGAGGTTGA...TAGTGAGCTGTGGCTGTCTGTTCTCTGTGTGTTGTCATATTGGAGGTTAATTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR CCA 90 bp | ATGAGATGCCAAGAATTTGGAACCCAGTGCTGTTCGTGCCACCCAACTGACAGGTGGTGTCATAGTTGTTaGAGTGACGGTCAAACTTGT | + |
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Preference number: 4 (lower is better) Translates to: MRCQEFGTQCCSCHPTDRWCHSC*SDGQTC Trigger: ACAAGTTTGACCGTCACTCCAACAACTATGACACCA...CCTGTCAGTTGGGTGGCACGAACAGCACTGGGTTCCAAATTCTTGGCATCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR CCA 90 bp | GGCATGCAAGCTAGTGGAAGCAAGCAAGTCTATATGCAGTGGACCGTCTCCAAGGATATACACCTGGTTTaGGTTGTTACCATAGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: GMQASGSKQVYMQWTVSKDIHLV*VVTIGD Trigger: GTCTCCTATGGTAACAACCCAAACCAGGTGTATATC...CTTGGAGACGGTCCACTGCATATAGACTTGCTTGCTTCCACTAGCTTGCATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR CCA 90 bp | AGATCCACTCTCCAGAGTAGAGATGGACATTACACTACTGTCACAGTGCTTCAGCATCATAGTGATCAGTaGGACAGACATCAGTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: RSTLQSRDGHYTTVTVLQHHSDQ*DRHQWV Trigger: AACCCACTGATGTCTGTCCCACTGATCACTATGATG...CTGAAGCACTGTGACAGTAGTGTAATGTCCATCTCTACTCTGGAGAGTGGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR TCA 90 bp | GCCATATTTATAATTAACCTCCAATATGACAACACACAGAGAACAGACAGCCACCAGGCTTATGGTCACTaGTGCTGTATGCCATGTGGC | + |
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Preference number: 4 (lower is better) Translates to: AIFIINLQYDNTQRTDSHQAYGH*CCMPCG Trigger: GCCACATGGCATACAGCATCAGTGACCATAAGCCTG...GTGGCTGTCTGTTCTCTGTGTGTTGTCATATTGGAGGTTAATTATAAATATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR TCA 90 bp | ATAATTAACCTCCAATATGACAACACACAGAGAACAGACAGCCACAGCTCACTAGGACTTGAGAGATCTTaGCAAAGTTCAGTGGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: IINLQYDNTQRTDSHSSLGLERS*QSSVGK Trigger: TTTCCCCACTGAACTTTGTCAAGATCTCTCAAGTCC...TAGTGAGCTGTGGCTGTCTGTTCTCTGTGTGTTGTCATATTGGAGGTTAATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR CAA 90 bp | GGGAGCTGGAGGATAGTCAGGAGCCTCCTCAGGGGCTGGGCCAGACCCAGCGCTCGGGATCTTGAAGGGTaGACTTATCCCCACTACAGA | + |
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Preference number: 5 (lower is better) Translates to: GSWRIVRSLLRGWARPSARDLEG*TYPHYR Trigger: TCTGTAGTGGGGATAAGTCAACCCTTCAAGATCCCG...AGCGCTGGGTCTGGCCCAGCCCCTGAGGAGGCTCCTGACTATCCTCCAGCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000139856.2 |
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| CDS-3UTR CAA 90 bp | GGCTGGGCCAGACCCAGCGCTGCTGGCAGTGCTGAAGCAGAGCTGGCTTCCAGCCGGGATCTTGAAGGGTaGACTTATCCCCACTACAGA | + |
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Preference number: 5 (lower is better) Translates to: GWARPSAAGSAEAELASSRDLEG*TYPHYR Trigger: TCTGTAGTGGGGATAAGTCAACCCTTCAAGATCCCG...GCTGGAAGCCAGCTCTGCTTCAGCACTGCCAGCAGCGCTGGGTCTGGCCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006286.9 ENSMUST00000139856.2 |
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| CDS-3UTR CAA 90 bp | GGACAGGCCATATCCACATGGCTCCCAGAGAGTGCTGAGGCTTCTTCTTGCCGCGGCAAATGCTGGTACTaGGCAAAGACCAGTAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: GQAISTWLPESAEASSCRGKCWY*AKTSKR Trigger: TCTCTTACTGGTCTTTGCCAAGTACCAGCATTTGCC...GCGGCAAGAAGAAGCCTCAGCACTCTCTGGGAGCCATGTGGATATGGCCTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR CAA 90 bp | GATGCCAAGAATTTGGAACCCAGTGCTGTTCGTGCCACCCAACTGACAGGGCCTCCCCTGCATACGGACTaGAGAGATCTTGACAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: DAKNLEPSAVRATQLTGPPLHTD*RDLDKV Trigger: AACTTTGTCAAGATCTCTCAAGTCCGTATGCAGGGG...AGGCCCTGTCAGTTGGGTGGCACGAACAGCACTGGGTTCCAAATTCTTGGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS-3UTR CAA 90 bp | AAGCTAGTGGAAGCAAGCAAGTCTATATGCAGTGGACCGTCTCCAAGTCTTCACAGCTTCAGGCAGACGTaGACTCCCCCTTTGTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: KLVEASKSICSGPSPSLHSFRQT*TPPLFP Trigger: GGGGAACAAAGGGGGAGTCAACGTCTGCCTGAAGCT...GTGAAGACTTGGAGACGGTCCACTGCATATAGACTTGCTTGCTTCCACTAGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS TCA 90 bp | AAACCAATGATATATATGTCCAGATTCAGGTCTTGGTTGTTCAGTTaGAGTAGGTCACTGAGGTCTACAGTGGGGGCTGCGGAGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: KPMIYMSRFRSWLFS*SRSLRSTVGAAEAT Trigger: TGTGGCCTCCGCAGCCCCCACTGTAGACCTCAGTGACCTACTTCAACTGAACAACCAAGACCTGAATCTGGACATATATATCATTGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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| CDS TCA 72 bp | ATATATATGTCCAGATTCAGGTCTTGGTTGTTCAGTTaGAGTAGGTCACTGAGGTCTACAGTGGGGGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: IYMSRFRSWLFS*SRSLRSTVGAA Trigger: CGCAGCCCCCACTGTAGACCTCAGTGACCTACTTCAACTGAACAACCAAGACCTGAATCTGGACATATATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006286.9 |
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