RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INPP5E (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026925

Ensembl transcript IDs: ENSMUST00000114090.8, ENSMUST00000131109.8, ENSMUST00000144011.3, ENSMUST00000145701.8

Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGAGGGCTGGGTCTGTGGTGAGAGCAGGGAGCCCCTGGCCGTGGTaGATTAGAATCCCAGCATTACAGGAGCAGCTGAGAAGAAGCCCA +
Preference number: 1 (lower is better)
Translates to: LRAGSVVRAGSPWPW*IRIPALQEQLRRSP
Trigger: TGGGCTTCTTCTCAGCTGCTCCTGTAATGCTGGGATTCTAATCCACCACGGCCAGGGGCTCCCTGCTCTCACCACAGACCCAGCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR CCA 90 bp CTGCTGCTTGGTGTCCACATGCCCTGCCATGTGCCTGTGGGAACATaGTATAAATGTCCTGAGGGCTGGGTCTGTGGTGAGAGCAGGGAG +
Preference number: 1 (lower is better)
Translates to: LLLGVHMPCHVPVGT*YKCPEGWVCGESRE
Trigger: CTCCCTGCTCTCACCACAGACCCAGCCCTCAGGACATTTATACCATGTTCCCACAGGCACATGGCAGGGCATGTGGACACCAAGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR GCA 90 bp GCTGTGGCCAGTCCTGGTCTGGAATCTTCAGGACACGGTGCAAACTaGACTGGAGCTCTGGCTCTTCAGTGCTTCCTGTCTCTGAATCTC +
Preference number: 1 (lower is better)
Translates to: AVASPGLESSGHGAN*TGALALQCFLSLNL
Trigger: GAGATTCAGAGACAGGAAGCACTGAAGAGCCAGAGCTCCAGTGCAGTTTGCACCGTGTCCTGAAGATTCCAGACCAGGACTGGCCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
3UTR CCA 90 bp GGCCAGTCCTGGTCTGGAATCTTCAGGACACGGTGCAAACTGCACTaGAGCTCTGGCTCTTCAGTGCTTCCTGTCTCTGAATCTCCTTTG +
Preference number: 1 (lower is better)
Translates to: GQSWSGIFRTRCKLH*SSGSSVLPVSESPL
Trigger: CAAAGGAGATTCAGAGACAGGAAGCACTGAAGAGCCAGAGCTCCAGTGCAGTTTGCACCGTGTCCTGAAGATTCCAGACCAGGACTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
3UTR GCA 90 bp GTCTTTTCTAAGGTGCCAGAGAATGTCCACAAAGAAGCACCAAACTaGTGGGCTGTGGTAGTGCACGCCTTTAATCCCAGCATTCAGGAG +
Preference number: 1 (lower is better)
Translates to: VFSKVPENVHKEAPN*WAVVVHAFNPSIQE
Trigger: CTCCTGAATGCTGGGATTAAAGGCGTGCACTACCACAGCCCAGCAGTTTGGTGCTTCTTTGTGGACATTCTCTGGCACCTTAGAAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
3UTR CCA 90 bp TTTTCTAAGGTGCCAGAGAATGTCCACAAAGAAGCACCAAACTGCTaGGCTGTGGTAGTGCACGCCTTTAATCCCAGCATTCAGGAGGCA +
Preference number: 1 (lower is better)
Translates to: FSKVPENVHKEAPNC*AVVVHAFNPSIQEA
Trigger: TGCCTCCTGAATGCTGGGATTAAAGGCGTGCACTACCACAGCCCAGCAGTTTGGTGCTTCTTTGTGGACATTCTCTGGCACCTTAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
3UTR TCA 90 bp GGACAGTACCTAGCAGAAAGACCTGGGATGGGACTGAGTAGCAGGTaGCAGCTGAGACCAAATGTTTGGCCTTTGACTTCTATGTCCTTT +
Preference number: 1 (lower is better)
Translates to: GQYLAERPGMGLSSR*QLRPNVWPLTSMSF
Trigger: AAAGGACATAGAAGTCAAAGGCCAAACATTTGGTCTCAGCTGTCACCTGCTACTCAGTCCCATCCCAGGTCTTTCTGCTAGGTACTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
3UTR GCA 90 bp GGGCAGCCTGTCTGGGAGAGAAAAGGCTGTCTTCCCAGTAGAATTTaGAGTTCACAGTGGTTTATTGAAGCAGGTGACTTTCCATATTGG +
Preference number: 1 (lower is better)
Translates to: GQPVWERKGCLPSRI*SSQWFIEAGDFPYW
Trigger: CCAATATGGAAAGTCACCTGCTTCAATAAACCACTGTGAACTGCAAATTCTACTGGGAAGACAGCCTTTTCTCTCCCAGACAGGCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
3UTR TCA 90 bp TCTGGAACTCTTACCACATCAAACCTTATTCAAGCCAGGAATAGTTaGGGCAGGATTATGAAGTCCAGGGCAGCCTGTCTGGGAGAGAAA +
Preference number: 1 (lower is better)
Translates to: SGTLTTSNLIQARNS*GRIMKSRAACLGEK
Trigger: TTTCTCTCCCAGACAGGCTGCCCTGGACTTCATAATCCTGCCTCAACTATTCCTGGCTTGAATAAGGTTTGATGTGGTAAGAGTTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
3UTR CCA 90 bp AAGCCTGTCAAAATGTCTGTAGGGAATATCCCAGAATTGAAGTCCTaGCAGGTTCTAGGCATTGAGCATCTAGGATACCAGAGGTTGCCT +
Preference number: 1 (lower is better)
Translates to: KPVKMSVGNIPELKS*QVLGIEHLGYQRLP
Trigger: AGGCAACCTCTGGTATCCTAGATGCTCAATGCCTAGAACCTGCCAGGACTTCAATTCTGGGATATTCCCTACAGACATTTTGACAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR-3UTR CCA 90 bp CTACTCAACTGGGGGTTGGGAGCCTGGGACCAGGATGTAGAACCTCAAAGCCTGAGAGCAGGGAGCCCCTaGCCGTGGTGGATTAGAATC +
Preference number: 2 (lower is better)
Translates to: LLNWGLGAWDQDVEPQSLRAGSP*PWWIRI
Trigger: GATTCTAATCCACCACGGCCAGGGGCTCCCTGCTCT...CAGGCTTTGAGGTTCTACATCCTGGTCCCAGGCTCCCAACCCCCAGTTGAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR CAA 90 bp GCATTACAGGAGCAGCTGAGAAGAAGCCCATCCTTTGCAGTGACCTaGGCCCCCGTTGCTGTGGCCAGTCCTGGTCTGGAATCTTCAGGA +
Preference number: 2 (lower is better)
Translates to: ALQEQLRRSPSFAVT*APVAVASPGLESSG
Trigger: TCCTGAAGATTCCAGACCAGGACTGGCCACAGCAACGGGGGCCAAGGTCACTGCAAAGGATGGGCTTCTTCTCAGCTGCTCCTGTAATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
3UTR-3UTR TCA 90 bp GGGTCTGTGGTGAGAGCAGGGAGCCCCTGGCCGTGGTGGATTAGAATCCCAGCAAGTGCTTCCTGTCTCTaGATCTCCTTTGAAATCCGC +
Preference number: 2 (lower is better)
Translates to: GSVVRAGSPWPWWIRIPASASCL*ISFEIR
Trigger: GCGGATTTCAAAGGAGATTCAGAGACAGGAAGCACT...TGCTGGGATTCTAATCCACCACGGCCAGGGGCTCCCTGCTCTCACCACAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
3UTR-3UTR CCA 90 bp CATTCAGGAGGCAGAAGCAGGTGGTTCTCCAAGTTCGAGGCCAGCCTGGTCTACCCAGGGCAGCCTGTCTaGGAGAGAAAAGGCTGTCTT +
Preference number: 2 (lower is better)
Translates to: HSGGRSRWFSKFEASLVYPGQPV*ERKGCL
Trigger: AAGACAGCCTTTTCTCTCCCAGACAGGCTGCCCTGG...GTAGACCAGGCTGGCCTCGAACTTGGAGAACCACCTGCTTCTGCCTCCTGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
3UTR CAA 90 bp CTAGGCTTGGCCTGTAGAGTGGAGAGGTCCCTACTCAACTGGGGGTaGGGAGCCTGGGACCAGGATGTAGAACCTCAAAGCCTGTCAAAA +
Preference number: 2 (lower is better)
Translates to: LGLACRVERSLLNWG*GAWDQDVEPQSLSK
Trigger: TTTTGACAGGCTTTGAGGTTCTACATCCTGGTCCCAGGCTCCCAACCCCCAGTTGAGTAGGGACCTCTCCACTCTACAGGCCAAGCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR-3UTR CCA 90 bp TTACAGGAGCAGCTGAGAAGAAGCCCATCCTTTGCAGTGACCTTGGCCCCCGTTACTGCACTGGAGCTCTaGCTCTTCAGTGCTTCCTGT +
Preference number: 2 (lower is better)
Translates to: LQEQLRRSPSFAVTLAPVTALEL*LFSASC
Trigger: ACAGGAAGCACTGAAGAGCCAGAGCTCCAGTGCAGT...AACGGGGGCCAAGGTCACTGCAAAGGATGGGCTTCTTCTCAGCTGCTCCTGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
3UTR-3UTR CCA 90 bp AGCAGTGCTCAAGGGCAAGAAGTCTGGACTACTCCTGAGGACAAAACTGCTGCTAGAGCAGGGAGCCCCTaGCCGTGGTGGATTAGAATC +
Preference number: 2 (lower is better)
Translates to: SSAQGQEVWTTPEDKTAARAGSP*PWWIRI
Trigger: GATTCTAATCCACCACGGCCAGGGGCTCCCTGCTCT...AGCAGCAGTTTTGTCCTCAGGAGTAGTCCAGACTTCTTGCCCTTGAGCACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR-3UTR CCA 90 bp TCTGGACTACTCCTGAGGACAAAACTGCTGCTTGGTGTCCACATGCCCTGCCATCCAGGGCAGCCTGTCTaGGAGAGAAAAGGCTGTCTT +
Preference number: 2 (lower is better)
Translates to: SGLLLRTKLLLGVHMPCHPGQPV*ERKGCL
Trigger: AAGACAGCCTTTTCTCTCCCAGACAGGCTGCCCTGG...ATGGCAGGGCATGTGGACACCAAGCAGCAGTTTTGTCCTCAGGAGTAGTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
3UTR-3UTR CCA 90 bp GAGGCAGAAGCAGGTGGTTCTCCAAGTTCGAGGCCAGCCTGGTCTACAGAGAGTACAGAGAAACCTGTCTaGAACTCTTACCACATCAAA +
Preference number: 2 (lower is better)
Translates to: EAEAGGSPSSRPAWSTESTEKPV*NSYHIK
Trigger: TTTGATGTGGTAAGAGTTCCAGACAGGTTTCTCTGT...ACTCTCTGTAGACCAGGCTGGCCTCGAACTTGGAGAACCACCTGCTTCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
3UTR-3UTR CCA 90 bp CATTCAGGAGGCAGAAGCAGGTGGTTCTCCAAGTTCGAGGCCAGCCTGGTCTACACAGAGAAACCTGTCTaGAACTCTTACCACATCAAA +
Preference number: 2 (lower is better)
Translates to: HSGGRSRWFSKFEASLVYTEKPV*NSYHIK
Trigger: TTTGATGTGGTAAGAGTTCCAGACAGGTTTCTCTGT...GTAGACCAGGCTGGCCTCGAACTTGGAGAACCACCTGCTTCTGCCTCCTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
3UTR-3UTR CCA 90 bp CCTGTCAAAATGTCTGTAGGGAATATCCCAGAATTGAAGTCCTGGCAGGTTCTATGCCTGATCCTTCCCTaGAGGGAAGGAGCTACTAGG +
Preference number: 2 (lower is better)
Translates to: PVKMSVGNIPELKSWQVLCLILP*REGATR
Trigger: CCTAGTAGCTCCTTCCCTCCAGGGAAGGATCAGGCA...TAGAACCTGCCAGGACTTCAATTCTGGGATATTCCCTACAGACATTTTGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR-3UTR CCA 90 bp AAGCAGGTGACTTTCCATATTGGAGAAGCTGATGCTGTTGAGTTTCACCTTATTTACTCAACTGGGGGTTaGGAGCCTGGGACCAGGATG +
Preference number: 2 (lower is better)
Translates to: KQVTFHIGEADAVEFHLIYSTGG*EPGTRM
Trigger: CATCCTGGTCCCAGGCTCCCAACCCCCAGTTGAGTA...AATAAGGTGAAACTCAACAGCATCAGCTTCTCCAATATGGAAAGTCACCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
3UTR-3UTR CCA 90 bp AAGCAGGTGACTTTCCATATTGGAGAAGCTGATGCTGTTGAGTTTCACCTTATTGGAGGCAGAAGCAGGTaGTTCTCCAAGTTCGAGGCC +
Preference number: 2 (lower is better)
Translates to: KQVTFHIGEADAVEFHLIGGRSR*FSKFEA
Trigger: GGCCTCGAACTTGGAGAACCACCTGCTTCTGCCTCC...AATAAGGTGAAACTCAACAGCATCAGCTTCTCCAATATGGAAAGTCACCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
3UTR-3UTR CCA 90 bp GGTTCACTGGAGTCCCAAGTCGTCACTTTTTCCAGCTATTGCTGCTTCTGGCTGCTGAGACCAAATGTTTaGCCTTTGACTTCTATGTCC +
Preference number: 2 (lower is better)
Translates to: GSLESQVVTFSSYCCFWLLRPNV*PLTSMS
Trigger: GGACATAGAAGTCAAAGGCCAAACATTTGGTCTCAG...CAGCCAGAAGCAGCAATAGCTGGAAAAAGTGACGACTTGGGACTCCAGTGAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
3UTR-3UTR TCA 90 bp ATGCATGCAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTTTACAATTGTTGAGGCAGGATTATaGAGTCCAGGGCAGCCTGTC +
Preference number: 2 (lower is better)
Translates to: MHADFFQGSLFGQKEFTIVEAGL*SPGQPV
Trigger: GACAGGCTGCCCTGGACTTCATAATCCTGCCTCAAC...AATTGTAAACTCTTTCTGGCCAAAGAGTGAACCTTGGAAGAAGTCTGCATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
3UTR-3UTR CCA 90 bp AAGCCTGTCAAAATGTCTGTAGGGAATATCCCAGAATTGAAGTCCTGGCAGGTTCTAGGAGGATACAGATaGAGAACCTGGGCTCTAGCA +
Preference number: 2 (lower is better)
Translates to: KPVKMSVGNIPELKSWQVLGGYR*RTWALA
Trigger: TGCTAGAGCCCAGGTTCTCCATCTGTATCCTCCTAG...AACCTGCCAGGACTTCAATTCTGGGATATTCCCTACAGACATTTTGACAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR CAA 90 bp AGAACCTCAAAGCCTGTCAAAATGTCTGTAGGGAATATCCCAGAATaGAAGTCCTGGCAGGTTCTAGGCATTGAGCATCTAGGATACCAG +
Preference number: 2 (lower is better)
Translates to: RTSKPVKMSVGNIPE*KSWQVLGIEHLGYQ
Trigger: CTGGTATCCTAGATGCTCAATGCCTAGAACCTGCCAGGACTTCAATTCTGGGATATTCCCTACAGACATTTTGACAGGCTTTGAGGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR-3UTR TCA 90 bp ATACAGATGGAGAACCTGGGCTCTAGCATGAGAACAGGAATAAATAAAAGGAGTCAAGCCAGGAATAGTTaGGGCAGGATTATGAAGTCC +
Preference number: 2 (lower is better)
Translates to: IQMENLGSSMRTGINKRSQARNS*GRIMKS
Trigger: GGACTTCATAATCCTGCCTCAACTATTCCTGGCTTG...ACTCCTTTTATTTATTCCTGTTCTCATGCTAGAGCCCAGGTTCTCCATCTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
3UTR-3UTR GCA 90 bp ATACAGATGGAGAACCTGGGCTCTAGCATGAGAACAGGAATAAATAAAAGGAGTTTGAAGAGACAGCAGTaGTCAAGGGCAAGAAGTCTG +
Preference number: 2 (lower is better)
Translates to: IQMENLGSSMRTGINKRSLKRQQ*SRARSL
Trigger: CAGACTTCTTGCCCTTGAGCACTGCTGTCTCTTCAA...ACTCCTTTTATTTATTCCTGTTCTCATGCTAGAGCCCAGGTTCTCCATCTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR-3UTR GCA 90 bp TCTGGGAGAGAAAAGGCTGTCTTCCCAGTAGAATTTGCAGTTCACAGTGGTTTACTTCCCAGTAGAATTTaGAGTTCACAGTGGTTTATT +
Preference number: 2 (lower is better)
Translates to: SGREKAVFPVEFAVHSGLLPSRI*SSQWFI
Trigger: AATAAACCACTGTGAACTGCAAATTCTACTGGGAAG...TAAACCACTGTGAACTGCAAATTCTACTGGGAAGACAGCCTTTTCTCTCCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
3UTR CCA 72 bp GCTGGGTCTGTGGTGAGAGCAGGGAGCCCCTGGCCGTaGTGGATTAGAATCCCAGCATTACAGGAGCAGCTG +
Preference number: 3 (lower is better)
Translates to: AGSVVRAGSPWP*WIRIPALQEQL
Trigger: CAGCTGCTCCTGTAATGCTGGGATTCTAATCCACCACGGCCAGGGGCTCCCTGCTCTCACCACAGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR CCA 72 bp GGGTCTGTGGTGAGAGCAGGGAGCCCCTGGCCGTGGTaGATTAGAATCCCAGCATTACAGGAGCAGCTGAGA +
Preference number: 3 (lower is better)
Translates to: GSVVRAGSPWPW*IRIPALQEQLR
Trigger: TCTCAGCTGCTCCTGTAATGCTGGGATTCTAATCCACCACGGCCAGGGGCTCCCTGCTCTCACCACAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR CCA 72 bp GGCTTGGCCTGTAGAGTGGAGAGGTCCCTACTCAACTaGGGGTTGGGAGCCTGGGACCAGGATGTAGAACCT +
Preference number: 3 (lower is better)
Translates to: GLACRVERSLLN*GLGAWDQDVEP
Trigger: AGGTTCTACATCCTGGTCCCAGGCTCCCAACCCCCAGTTGAGTAGGGACCTCTCCACTCTACAGGCCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR GCA 72 bp AGCATTACAGGAGCAGCTGAGAAGAAGCCCATCCTTTaGAGTGACCTTGGCCCCCGTTGCTGTGGCCAGTCC +
Preference number: 3 (lower is better)
Translates to: SITGAAEKKPIL*SDLGPRCCGQS
Trigger: GGACTGGCCACAGCAACGGGGGCCAAGGTCACTGCAAAGGATGGGCTTCTTCTCAGCTGCTCCTGTAATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR GCA 72 bp AAGAAGCCCATCCTTTGCAGTGACCTTGGCCCCCGTTaGTGTGGCCAGTCCTGGTCTGGAATCTTCAGGACA +
Preference number: 3 (lower is better)
Translates to: KKPILCSDLGPR*CGQSWSGIFRT
Trigger: TGTCCTGAAGATTCCAGACCAGGACTGGCCACAGCAACGGGGGCCAAGGTCACTGCAAAGGATGGGCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
3UTR GCA 72 bp TGTGGCCAGTCCTGGTCTGGAATCTTCAGGACACGGTaGAAACTGCACTGGAGCTCTGGCTCTTCAGTGCTT +
Preference number: 3 (lower is better)
Translates to: CGQSWSGIFRTR*KLHWSSGSSVL
Trigger: AAGCACTGAAGAGCCAGAGCTCCAGTGCAGTTTGCACCGTGTCCTGAAGATTCCAGACCAGGACTGGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
3UTR CCA 72 bp TGCTGCTTGGTGTCCACATGCCCTGCCATGTGCCTGTaGGAACATGGTATAAATGTCCTGAGGGCTGGGTCT +
Preference number: 3 (lower is better)
Translates to: CCLVSTCPAMCL*EHGINVLRAGS
Trigger: AGACCCAGCCCTCAGGACATTTATACCATGTTCCCACAGGCACATGGCAGGGCATGTGGACACCAAGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR CCA 72 bp GAAGTCTGGACTACTCCTGAGGACAAAACTGCTGCTTaGTGTCCACATGCCCTGCCATGTGCCTGTGGGAAC +
Preference number: 3 (lower is better)
Translates to: EVWTTPEDKTAA*CPHALPCACGN
Trigger: GTTCCCACAGGCACATGGCAGGGCATGTGGACACCAAGCAGCAGTTTTGTCCTCAGGAGTAGTCCAGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR CCA 72 bp GTGGAGAGGTCCCTACTCAACTGGGGGTTGGGAGCCTaGGACCAGGATGTAGAACCTCAAAGCCTGTCAAAA +
Preference number: 3 (lower is better)
Translates to: VERSLLNWGLGA*DQDVEPQSLSK
Trigger: TTTTGACAGGCTTTGAGGTTCTACATCCTGGTCCCAGGCTCCCAACCCCCAGTTGAGTAGGGACCTCTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR TCA 72 bp CAGCAGTGCTCAAGGGCAAGAAGTCTGGACTACTCCTaGGGACAAAACTGCTGCTTGGTGTCCACATGCCCT +
Preference number: 3 (lower is better)
Translates to: QQCSRARSLDYS*GQNCCLVSTCP
Trigger: AGGGCATGTGGACACCAAGCAGCAGTTTTGTCCTCAGGAGTAGTCCAGACTTCTTGCCCTTGAGCACTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR GCA 72 bp AGTCCTGGTCTGGAATCTTCAGGACACGGTGCAAACTaGACTGGAGCTCTGGCTCTTCAGTGCTTCCTGTCT +
Preference number: 3 (lower is better)
Translates to: SPGLESSGHGAN*TGALALQCFLS
Trigger: AGACAGGAAGCACTGAAGAGCCAGAGCTCCAGTGCAGTTTGCACCGTGTCCTGAAGATTCCAGACCAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
3UTR CCA 72 bp GTGCCAGAGAATGTCCACAAAGAAGCACCAAACTGCTaGGCTGTGGTAGTGCACGCCTTTAATCCCAGCATT +
Preference number: 3 (lower is better)
Translates to: VPENVHKEAPNC*AVVVHAFNPSI
Trigger: AATGCTGGGATTAAAGGCGTGCACTACCACAGCCCAGCAGTTTGGTGCTTCTTTGTGGACATTCTCTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
3UTR TCA 72 bp CTAGCAGAAAGACCTGGGATGGGACTGAGTAGCAGGTaGCAGCTGAGACCAAATGTTTGGCCTTTGACTTCT +
Preference number: 3 (lower is better)
Translates to: LAERPGMGLSSR*QLRPNVWPLTS
Trigger: AGAAGTCAAAGGCCAAACATTTGGTCTCAGCTGTCACCTGCTACTCAGTCCCATCCCAGGTCTTTCTGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
3UTR-3UTR CAA 90 bp GGTTCACTGGAGTCCCAAGTCGTCACTTTTTCCAGCTATTGCTGCTTCTGGCTGTCCAAGGTTCACTCTTaGGCCAGAAAGAGTTTACAA +
Preference number: 3 (lower is better)
Translates to: GSLESQVVTFSSYCCFWLSKVHS*ARKSLQ
Trigger: TTGTAAACTCTTTCTGGCCAAAGAGTGAACCTTGGA...CAGCCAGAAGCAGCAATAGCTGGAAAAAGTGACGACTTGGGACTCCAGTGAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
3UTR TCA 72 bp CTTACCACATCAAACCTTATTCAAGCCAGGAATAGTTaGGGCAGGATTATGAAGTCCAGGGCAGCCTGTCTG +
Preference number: 3 (lower is better)
Translates to: LTTSNLIQARNS*GRIMKSRAACL
Trigger: CAGACAGGCTGCCCTGGACTTCATAATCCTGCCTCAACTATTCCTGGCTTGAATAAGGTTTGATGTGGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
3UTR-3UTR CAA 90 bp CAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTTTACAATTGAATATACTAGGATACCAGAGGTaGCCTGATCCTTCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: QTSSKVHSLARKSLQLNILGYQR*PDPSLE
Trigger: CTCCAGGGAAGGATCAGGCAACCTCTGGTATCCTAG...TATATTCAATTGTAAACTCTTTCTGGCCAAAGAGTGAACCTTGGAAGAAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
3UTR GCA 72 bp GTCTGGGAGAGAAAAGGCTGTCTTCCCAGTAGAATTTaGAGTTCACAGTGGTTTATTGAAGCAGGTGACTTT +
Preference number: 3 (lower is better)
Translates to: VWERKGCLPSRI*SSQWFIEAGDF
Trigger: AAAGTCACCTGCTTCAATAAACCACTGTGAACTGCAAATTCTACTGGGAAGACAGCCTTTTCTCTCCCAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
3UTR CCA 72 bp AAAATGTCTGTAGGGAATATCCCAGAATTGAAGTCCTaGCAGGTTCTAGGCATTGAGCATCTAGGATACCAG +
Preference number: 3 (lower is better)
Translates to: KMSVGNIPELKS*QVLGIEHLGYQ
Trigger: CTGGTATCCTAGATGCTCAATGCCTAGAACCTGCCAGGACTTCAATTCTGGGATATTCCCTACAGACATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR CCA 72 bp GGAGAAGCTGATGCTGTTGAGTTTCACCTTATTCGTTaGTTTATTATGGTTCACTGGAGTCCCAAGTCGTCA +
Preference number: 3 (lower is better)
Translates to: GEADAVEFHLIR*FIMVHWSPKSS
Trigger: TGACGACTTGGGACTCCAGTGAACCATAATAAACCAACGAATAAGGTGAAACTCAACAGCATCAGCTTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
3UTR CCA 72 bp CCCCTAAGACTTTATGATCTTGATCTTGGGCCAAACTaGGAAGTTCCAGGATTACCTCAGTCTTTTCTAAGG +
Preference number: 3 (lower is better)
Translates to: PLRLYDLDLGPN*EVPGLPQSFLR
Trigger: CCTTAGAAAAGACTGAGGTAATCCTGGAACTTCCCAGTTTGGCCCAAGATCAAGATCATAAAGTCTTAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
3UTR CCA 72 bp AAAGGCTGTCTTCCCAGTAGAATTTGCAGTTCACAGTaGTTTATTGAAGCAGGTGACTTTCCATATTGGAGA +
Preference number: 3 (lower is better)
Translates to: KGCLPSRICSSQ*FIEAGDFPYWR
Trigger: TCTCCAATATGGAAAGTCACCTGCTTCAATAAACCACTGTGAACTGCAAATTCTACTGGGAAGACAGCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
3UTR CCA 72 bp ATGCTGTTGAGTTTCACCTTATTCGTTGGTTTATTATaGTTCACTGGAGTCCCAAGTCGTCACTTTTTCCAG +
Preference number: 3 (lower is better)
Translates to: MLLSFTLFVGLL*FTGVPSRHFFQ
Trigger: CTGGAAAAAGTGACGACTTGGGACTCCAGTGAACCATAATAAACCAACGAATAAGGTGAAACTCAACAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp GGGTCTGTGGTGAGAGCAGGGAGCCCCTGGCCGTGGTGGATTAGAATCCCAGCAGGGCCCAGGTTGCTGTaGGCCCTGACCAGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GSVVRAGSPWPWWIRIPAGPRLL*ALTSLV
Trigger: GACCAGACTGGTCAGGGCCCACAGCAACCTGGGCCC...TGCTGGGATTCTAATCCACCACGGCCAGGGGCTCCCTGCTCTCACCACAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp GGGTCTGTGGTGAGAGCAGGGAGCCCCTGGCCGTGGTGGATTAGAATCCCAGCAGGTTGCTGTGGGCCCTaGCCAGTCTGGTCTGCATGC +
Preference number: 4 (lower is better)
Translates to: GSVVRAGSPWPWWIRIPAGCCGP*PVWSAC
Trigger: GCATGCAGACCAGACTGGTCAGGGCCCACAGCAACC...TGCTGGGATTCTAATCCACCACGGCCAGGGGCTCCCTGCTCTCACCACAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp AGTGACCTTGGCCCCCGTTGCTGTGGCCAGTCCTGGTCTGGAATCTTCAGGACAGGGCCCAGGTTGCTGTaGGCCCTGACCAGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SDLGPRCCGQSWSGIFRTGPRLL*ALTSLV
Trigger: GACCAGACTGGTCAGGGCCCACAGCAACCTGGGCCC...TGTCCTGAAGATTCCAGACCAGGACTGGCCACAGCAACGGGGGCCAAGGTCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
CDS-3UTR CCA 90 bp GGGTCTGTGGTGAGAGCAGGGAGCCCCTGGCCGTGGTGGATTAGAATCCCAGCAATCTCCCGGGTGAGCTaGTCGTGTTGGAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GSVVRAGSPWPWWIRIPAISRVS*SCWRRA
Trigger: GGCTCTCCTCCAACACGACCAGCTCACCCGGGAGAT...TGCTGGGATTCTAATCCACCACGGCCAGGGGCTCCCTGCTCTCACCACAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp TTGGCCCCCGTTGCTGTGGCCAGTCCTGGTCTGGAATCTTCAGGACACGGTGCAGACAGCAGTACATACTaGGGGCCCAGTGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LAPVAVASPGLESSGHGADSSTY*GPSVSC
Trigger: GCAGGAGACACTGGGCCCTCAGTATGTACTGCTGTC...TGCACCGTGTCCTGAAGATTCCAGACCAGGACTGGCCACAGCAACGGGGGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
CDS-3UTR GCA 90 bp AGGGCTGGGTCTGTGGTGAGAGCAGGGAGCCCCTGGCCGTGGTGGATTAGAATCGGGCTTGGATGGTTCTaGTGTAGTCCAGTAGCCGCT +
Preference number: 4 (lower is better)
Translates to: RAGSVVRAGSPWPWWIRIGLGWF*CSPVAA
Trigger: AGCGGCTACTGGACTACAGCAGAACCATCCAAGCCC...GATTCTAATCCACCACGGCCAGGGGCTCCCTGCTCTCACCACAGACCCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp CTACTCAACTGGGGGTTGGGAGCCTGGGACCAGGATGTAGAACCTCAAAGCCTGCTCATCCAGGCTCGCTaGGAGCTCCTTCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LLNWGLGAWDQDVEPQSLLIQAR*ELLLAL
Trigger: CAGGGCCAGAAGGAGCTCCCAGCGAGCCTGGATGAG...CAGGCTTTGAGGTTCTACATCCTGGTCCCAGGCTCCCAACCCCCAGTTGAGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp TTGGCCCCCGTTGCTGTGGCCAGTCCTGGTCTGGAATCTTCAGGACACGGTGCACATGGGGTTTGTCTCTaGACCCTGAGAGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LAPVAVASPGLESSGHGAHGVCL*TLRVRG
Trigger: GCCTCTGACTCTCAGGGTTCAGAGACAAACCCCATG...TGCACCGTGTCCTGAAGATTCCAGACCAGGACTGGCCACAGCAACGGGGGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
CDS-3UTR CCA 90 bp GCTGTGGCCAGTCCTGGTCTGGAATCTTCAGGACACGGTGCAAACTGCACTGGAGTCACTCCACAAGGATaGGCTCCCTCCCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: AVASPGLESSGHGANCTGVTPQG*APSLTA
Trigger: GGCAGTGAGGGAGGGAGCCCATCCTTGTGGAGTGAC...TCCAGTGCAGTTTGCACCGTGTCCTGAAGATTCCAGACCAGGACTGGCCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
CDS-3UTR CCA 90 bp GAGGCAGAAGCAGGTGGTTCTCCAAGTTCGAGGCCAGCCTGGTCTACAGAGAGTCTAGCAGGGCCCCACTaGCCAGAAGACTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: EAEAGGSPSSRPAWSTESLAGPH*PEDFPP
Trigger: TGGAGGGAAGTCTTCTGGCCAGTGGGGCCCTGCTAG...ACTCTCTGTAGACCAGGCTGGCCTCGAACTTGGAGAACCACCTGCTTCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp AGGGCTGGGTCTGTGGTGAGAGCAGGGAGCCCCTGGCCGTGGTGGATTAGAATCTTTGTCTCTGAACCCTaGGAGTCAGAGGCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: RAGSVVRAGSPWPWWIRIFVSEP*ESEAGK
Trigger: CTTACCAGCCTCTGACTCTCAGGGTTCAGAGACAAA...GATTCTAATCCACCACGGCCAGGGGCTCCCTGCTCTCACCACAGACCCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp CTACTCAACTGGGGGTTGGGAGCCTGGGACCAGGATGTAGAACCTCAAAGCCTGGACAGCAGTACATACTaGGGGCCCAGTGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLNWGLGAWDQDVEPQSLDSSTY*GPSVSC
Trigger: GCAGGAGACACTGGGCCCTCAGTATGTACTGCTGTC...CAGGCTTTGAGGTTCTACATCCTGGTCCCAGGCTCCCAACCCCCAGTTGAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp AGGGCTGGGTCTGTGGTGAGAGCAGGGAGCCCCTGGCCGTGGTGGATTAGAATCGGTGGTCTGAAGTCTTaGTCCCAGGACAAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: RAGSVVRAGSPWPWWIRIGGLKS*SQDKRN
Trigger: ATTCCTCTTGTCCTGGGATCAAGACTTCAGACCACC...GATTCTAATCCACCACGGCCAGGGGCTCCCTGCTCTCACCACAGACCCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR GCA 90 bp AGCAGTGCTCAAGGGCAAGAAGTCTGGACTACTCCTGAGGACAAAACTGCTGCTGGCTCCCTCCCTCACTaGCTGTGGCCCTTCGGGACT +
Preference number: 4 (lower is better)
Translates to: SSAQGQEVWTTPEDKTAAGSLPH*LWPFGT
Trigger: AGTCCCGAAGGGCCACAGGCAGTGAGGGAGGGAGCC...AGCAGCAGTTTTGTCCTCAGGAGTAGTCCAGACTTCTTGCCCTTGAGCACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR GCA 90 bp CTACTCAACTGGGGGTTGGGAGCCTGGGACCAGGATGTAGAACCTCAAAGCCTGAGCTCCTTCTGGCCCTaGATGTTCCAGGTAGCCACG +
Preference number: 4 (lower is better)
Translates to: LLNWGLGAWDQDVEPQSLSSFWP*MFQVAT
Trigger: CGTGGCTACCTGGAACATGCAGGGCCAGAAGGAGCT...CAGGCTTTGAGGTTCTACATCCTGGTCCCAGGCTCCCAACCCCCAGTTGAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR CAA 72 bp GCCTGTAGAGTGGAGAGGTCCCTACTCAACTGGGGGTaGGGAGCCTGGGACCAGGATGTAGAACCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: ACRVERSLLNWG*GAWDQDVEPQS
Trigger: GCTTTGAGGTTCTACATCCTGGTCCCAGGCTCCCAACCCCCAGTTGAGTAGGGACCTCTCCACTCTACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR GCA 90 bp AGGCAGAAGCAGGTGGTTCTCCAAGTTCGAGGCCAGCCTGGTCTACAGAGAGTTGTCCCTGGAGCATTCTaGCTTCTAGCTGCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RQKQVVLQVRGQPGLQRVVPGAF*LLAAQV
Trigger: CACCTGGGCAGCTAGAAGGCAGAATGCTCCAGGGAC...AACTCTCTGTAGACCAGGCTGGCCTCGAACTTGGAGAACCACCTGCTTCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR GCA 90 bp GTGGAGAGGTCCCTACTCAACTGGGGGTTGGGAGCCTGGGACCAGGATGTAGAATCCTTTGCTTGGAGGTaGTGTCGTAGGTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VERSLLNWGLGAWDQDVESFAWR*CRRCPS
Trigger: GGAAGGACACCTACGACAGCACCTCCAAGCAAAGGA...TTCTACATCCTGGTCCCAGGCTCCCAACCCCCAGTTGAGTAGGGACCTCTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp ATTGAGCATCTAGGATACCAGAGGTTGCCTGATCCTTCCCTGGAGGGAAGGAGCGTCACTCCACAAGGATaGGCTCCCTCCCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: IEHLGYQRLPDPSLEGRSVTPQG*APSLTA
Trigger: GGCAGTGAGGGAGGGAGCCCATCCTTGTGGAGTGAC...GCTCCTTCCCTCCAGGGAAGGATCAGGCAACCTCTGGTATCCTAGATGCTCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp GGTTCACTGGAGTCCCAAGTCGTCACTTTTTCCAGCTATTGCTGCTTCTGGCTGCTCATCCAGGCTCGCTaGGAGCTCCTTCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GSLESQVVTFSSYCCFWLLIQAR*ELLLAL
Trigger: CAGGGCCAGAAGGAGCTCCCAGCGAGCCTGGATGAG...CAGCCAGAAGCAGCAATAGCTGGAAAAAGTGACGACTTGGGACTCCAGTGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp TTGGCCCCCGTTGCTGTGGCCAGTCCTGGTCTGGAATCTTCAGGACACGGTGCATTTTTGCTGGAATGCTaGAAGGAGGCATGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LAPVAVASPGLESSGHGAFLLEC*KEAWGL
Trigger: CAAACCCCATGCCTCCTTTCAGCATTCCAGCAAAAA...TGCACCGTGTCCTGAAGATTCCAGACCAGGACTGGCCACAGCAACGGGGGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
CDS-3UTR TCA 90 bp AAGTCCTGGCAGGTTCTAGGCATTGAGCATCTAGGATACCAGAGGTTGCCTGATGGTTGCTGTGGGCCCTaGCCAGTCTGGTCTGCATGC +
Preference number: 4 (lower is better)
Translates to: KSWQVLGIEHLGYQRLPDGCCGP*PVWSAC
Trigger: GCATGCAGACCAGACTGGTCAGGGCCCACAGCAACC...ATCAGGCAACCTCTGGTATCCTAGATGCTCAATGCCTAGAACCTGCCAGGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR GCA 90 bp ACACGGTGCAAACTGCACTGGAGCTCTGGCTCTTCAGTGCTTCCTGTCTCTGAAGTCCCTGGAGCATTCTaGCTTCTAGCTGCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: TRCKLHWSSGSSVLPVSEVPGAF*LLAAQV
Trigger: CACCTGGGCAGCTAGAAGGCAGAATGCTCCAGGGAC...TTCAGAGACAGGAAGCACTGAAGAGCCAGAGCTCCAGTGCAGTTTGCACCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
CDS-3UTR GCA 90 bp GACAGCAGTGCTCAAGGGCAAGAAGTCTGGACTACTCCTGAGGACAAAACTGCTCTTGCAAGGAGCCCCTaGAGGGACTGGCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: DSSAQGQEVWTTPEDKTALARSP*RDWPHS
Trigger: AGAATGGGGCCAGTCCCTGCAGGGGCTCCTTGCAAG...AGCAGTTTTGTCCTCAGGAGTAGTCCAGACTTCTTGCCCTTGAGCACTGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR GCA 90 bp ACCAGAGGTTGCCTGATCCTTCCCTGGAGGGAAGGAGCTACTAGGAGGATACAGGGACACGGTGCAAACTaGACTGGAGCTCTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: TRGCLILPWREGATRRIQGHGAN*TGALAL
Trigger: AAGAGCCAGAGCTCCAGTGCAGTTTGCACCGTGTCC...CTGTATCCTCCTAGTAGCTCCTTCCCTCCAGGGAAGGATCAGGCAACCTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp GGCCCCCGTTGCTGTGGCCAGTCCTGGTCTGGAATCTTCAGGACACGGTGCAAATCTAATGGGTGGCTGTaGGGTGATGAGATTTGCCTT +
Preference number: 4 (lower is better)
Translates to: GPRCCGQSWSGIFRTRCKSNGWL*GDEICL
Trigger: AAGGCAAATCTCATCACCCCACAGCCACCCATTAGA...TTTGCACCGTGTCCTGAAGATTCCAGACCAGGACTGGCCACAGCAACGGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
CDS-3UTR CCA 90 bp TCTGGACTACTCCTGAGGACAAAACTGCTGCTTGGTGTCCACATGCCCTGCCATGCTGGGAGCTCCTTCTaGCCCTGCATGTTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: SGLLLRTKLLLGVHMPCHAGSSF*PCMFQV
Trigger: TACCTGGAACATGCAGGGCCAGAAGGAGCTCCCAGC...ATGGCAGGGCATGTGGACACCAAGCAGCAGTTTTGTCCTCAGGAGTAGTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp TTGGCCCCCGTTGCTGTGGCCAGTCCTGGTCTGGAATCTTCAGGACACGGTGCAATTCTTGTCTCGTCCTaGCCTCACTTTCACCTGGAA +
Preference number: 4 (lower is better)
Translates to: LAPVAVASPGLESSGHGAILVSS*PHFHLE
Trigger: TTCCAGGTGAAAGTGAGGCCAGGACGAGACAAGAAT...TGCACCGTGTCCTGAAGATTCCAGACCAGGACTGGCCACAGCAACGGGGGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
CDS-3UTR CCA 90 bp GAGGCAGAAGCAGGTGGTTCTCCAAGTTCGAGGCCAGCCTGGTCTACAGAGAGTACTGCACTGGAGCTCTaGCTCTTCAGTGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: EAEAGGSPSSRPAWSTESTALEL*LFSASC
Trigger: ACAGGAAGCACTGAAGAGCCAGAGCTCCAGTGCAGT...ACTCTCTGTAGACCAGGCTGGCCTCGAACTTGGAGAACCACCTGCTTCTGCCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp CATGTGCCTGTGGGAACATGGTATAAATGTCCTGAGGGCTGGGTCTGTGGTGAGGATAGCTCCTGCTTCTaGTGTCCTTGGTGCGGATGG +
Preference number: 4 (lower is better)
Translates to: HVPVGTWYKCPEGWVCGEDSSCF*CPWCGW
Trigger: CCATCCGCACCAAGGACATCAGAAGCAGGAGCTATC...CTCACCACAGACCCAGCCCTCAGGACATTTATACCATGTTCCCACAGGCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR GCA 90 bp GCCTGTCAAAATGTCTGTAGGGAATATCCCAGAATTGAAGTCCTGGCAGGTTCTGGCTCCCTCCCTCACTaGCTGTGGCCCTTCGGGACT +
Preference number: 4 (lower is better)
Translates to: ACQNVCREYPRIEVLAGSGSLPH*LWPFGT
Trigger: AGTCCCGAAGGGCCACAGGCAGTGAGGGAGGGAGCC...AGAACCTGCCAGGACTTCAATTCTGGGATATTCCCTACAGACATTTTGACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR GCA 90 bp GGGAGCCTGGGACCAGGATGTAGAACCTCAAAGCCTGTCAAAATGTCTGTAGGGGGGCTTGGATGGTTCTaGTGTAGTCCAGTAGCCGCT +
Preference number: 4 (lower is better)
Translates to: GSLGPGCRTSKPVKMSVGGLGWF*CSPVAA
Trigger: AGCGGCTACTGGACTACAGCAGAACCATCCAAGCCC...CCCTACAGACATTTTGACAGGCTTTGAGGTTCTACATCCTGGTCCCAGGCTCCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp ACACGGTGCAAACTGCACTGGAGCTCTGGCTCTTCAGTGCTTCCTGTCTCTGAAGGTCTGGGAAGTACCTaGCCAGCTCTTCTGCTCCTA +
Preference number: 4 (lower is better)
Translates to: TRCKLHWSSGSSVLPVSEGLGST*PALLLL
Trigger: TAGGAGCAGAAGAGCTGGCCAGGTACTTCCCAGACC...TTCAGAGACAGGAAGCACTGAAGAGCCAGAGCTCCAGTGCAGTTTGCACCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
CDS-3UTR CCA 90 bp GGGAGCCTGGGACCAGGATGTAGAACCTCAAAGCCTGTCAAAATGTCTGTAGGGGGTCTGGGAAGTACCTaGCCAGCTCTTCTGCTCCTA +
Preference number: 4 (lower is better)
Translates to: GSLGPGCRTSKPVKMSVGGLGST*PALLLL
Trigger: TAGGAGCAGAAGAGCTGGCCAGGTACTTCCCAGACC...CCCTACAGACATTTTGACAGGCTTTGAGGTTCTACATCCTGGTCCCAGGCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp TTTGAAGAGACAGCAGTGCTCAAGGGCAAGAAGTCTGGACTACTCCTGAGGACAATCTCCCGGGTGAGCTaGTCGTGTTGGAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: FEETAVLKGKKSGLLLRTISRVS*SCWRRA
Trigger: GGCTCTCCTCCAACACGACCAGCTCACCCGGGAGAT...TGTCCTCAGGAGTAGTCCAGACTTCTTGCCCTTGAGCACTGCTGTCTCTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp GCTTGGCCTGTAGAGTGGAGAGGTCCCTACTCAACTGGGGGTTGGGAGCCTGGGAAGAGGAATACTTCATaGGACAGATGTCACCCTTGT +
Preference number: 4 (lower is better)
Translates to: AWPVEWRGPYSTGGWEPGKRNTS*DRCHPC
Trigger: ACAAGGGTGACATCTGTCCCATGAAGTATTCCTCTT...CCCAGGCTCCCAACCCCCAGTTGAGTAGGGACCTCTCCACTCTACAGGCCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp ATTGAGCATCTAGGATACCAGAGGTTGCCTGATCCTTCCCTGGAGGGAAGGAGCAGCTGGTGGTGTGTGTaGGGCATGCAAACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: IEHLGYQRLPDPSLEGRSSWWCV*GMQTCQ
Trigger: TTGGCAAGTTTGCATGCCTCACACACACCACCAGCT...GCTCCTTCCCTCCAGGGAAGGATCAGGCAACCTCTGGTATCCTAGATGCTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp CCCAGCATTACAGGAGCAGCTGAGAAGAAGCCCATCCTTTGCAGTGACCTTGGCTCAGAGCAGCCCTCCTaGATTCCAATGACATACAGG +
Preference number: 4 (lower is better)
Translates to: PSITGAAEKKPILCSDLGSEQPS*IPMTYR
Trigger: CCTGTATGTCATTGGAATTCAGGAGGGCTGCTCTGA...GCCAAGGTCACTGCAAAGGATGGGCTTCTTCTCAGCTGCTCCTGTAATGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp GTCTGGACTACTCCTGAGGACAAAACTGCTGCTTGGTGTCCACATGCCCTGCCACCCTTGGTCTTGATCTaGGACACGATGCGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: VWTTPEDKTAAWCPHALPPLVLI*DTMRVV
Trigger: AACTACACGCATCGTGTCTCAGATCAAGACCAAGGG...TGGCAGGGCATGTGGACACCAAGCAGCAGTTTTGTCCTCAGGAGTAGTCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp CCTGGTCTGGAATCTTCAGGACACGGTGCAAACTGCACTGGAGCTCTGGCTCTTGGTGGTCTGAAGTCTTaGTCCCAGGACAAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: PGLESSGHGANCTGALALGGLKS*SQDKRN
Trigger: ATTCCTCTTGTCCTGGGATCAAGACTTCAGACCACC...AAGAGCCAGAGCTCCAGTGCAGTTTGCACCGTGTCCTGAAGATTCCAGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
CDS-3UTR GCA 90 bp CATGTGCCTGTGGGAACATGGTATAAATGTCCTGAGGGCTGGGTCTGTGGTGAGTCCACCTCAGGTTTCTaGTTCAGGAAGGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: HVPVGTWYKCPEGWVCGESTSGF*FRKAST
Trigger: TGTGGAGGCCTTCCTGAAGCAGAAACCTGAGGTGGA...CTCACCACAGACCCAGCCCTCAGGACATTTATACCATGTTCCCACAGGCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR GCA 90 bp ACACGGTGCAAACTGCACTGGAGCTCTGGCTCTTCAGTGCTTCCTGTCTCTGAATCCTTTGCTTGGAGGTaGTGTCGTAGGTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TRCKLHWSSGSSVLPVSESFAWR*CRRCPS
Trigger: GGAAGGACACCTACGACAGCACCTCCAAGCAAAGGA...TTCAGAGACAGGAAGCACTGAAGAGCCAGAGCTCCAGTGCAGTTTGCACCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
CDS-3UTR CCA 90 bp ACAGCCGGGGCTACAGAGAAACCTGTCTGGAACTCTTACCACATCAAACCTTATATCTCCCGGGTGAGCTaGTCGTGTTGGAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: TAGATEKPVWNSYHIKPYISRVS*SCWRRA
Trigger: GGCTCTCCTCCAACACGACCAGCTCACCCGGGAGAT...ATAAGGTTTGATGTGGTAAGAGTTCCAGACAGGTTTCTCTGTAGCCCCGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp CCGTGGTGGATTAGAATCCCAGCATTACAGGAGCAGCTGAGAAGAAGCCCATCCGGTCCAAGGAGGTGCTaGTCATTCCAGAAAGACAGT +
Preference number: 4 (lower is better)
Translates to: PWWIRIPALQEQLRRSPSGPRRC*SFQKDS
Trigger: ACTGTCTTTCTGGAATGATCAGCACCTCCTTGGACC...GGATGGGCTTCTTCTCAGCTGCTCCTGTAATGCTGGGATTCTAATCCACCACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp TTTGAAGAGACAGCAGTGCTCAAGGGCAAGAAGTCTGGACTACTCCTGAGGACATTCGGAGGCTGTCCCTaGAGCATTCTGCCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: FEETAVLKGKKSGLLLRTFGGCP*SILPSS
Trigger: GCTAGAAGGCAGAATGCTCCAGGGACAGCCTCCGAA...TGTCCTCAGGAGTAGTCCAGACTTCTTGCCCTTGAGCACTGCTGTCTCTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp ATTGAGCATCTAGGATACCAGAGGTTGCCTGATCCTTCCCTGGAGGGAAGGAGCTTTTTGCTGGAATGCTaGAAGGAGGCATGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: IEHLGYQRLPDPSLEGRSFLLEC*KEAWGL
Trigger: CAAACCCCATGCCTCCTTTCAGCATTCCAGCAAAAA...GCTCCTTCCCTCCAGGGAAGGATCAGGCAACCTCTGGTATCCTAGATGCTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp TGCAAACTGCACTGGAGCTCTGGCTCTTCAGTGCTTCCTGTCTCTGAATCTCCTTCAGAGCAGCCCTCCTaGATTCCAATGACATACAGG +
Preference number: 4 (lower is better)
Translates to: CKLHWSSGSSVLPVSESPSEQPS*IPMTYR
Trigger: CCTGTATGTCATTGGAATTCAGGAGGGCTGCTCTGA...AGGAGATTCAGAGACAGGAAGCACTGAAGAGCCAGAGCTCCAGTGCAGTTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
CDS-3UTR TCA 90 bp AGCCGGGGCTACAGAGAAACCTGTCTGGAACTCTTACCACATCAAACCTTATTCTGCTGCTTCTGGCTGTaGGCAGGGACAGTACTTGTC +
Preference number: 4 (lower is better)
Translates to: SRGYRETCLELLPHQTLFCCFWL*AGTVLV
Trigger: GACAAGTACTGTCCCTGCTCACAGCCAGAAGCAGCA...GAATAAGGTTTGATGTGGTAAGAGTTCCAGACAGGTTTCTCTGTAGCCCCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000131109.8
CDS-3UTR GCA 90 bp AGGCAGAAGCAGGTGGTTCTCCAAGTTCGAGGCCAGCCTGGTCTACAGAGAGTTAAGAAAGTGAATCTCTaGCTCCTCAAAGCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: RQKQVVLQVRGQPGLQRVKKVNL*LLKAPE
Trigger: TTCAGGGGCTTTGAGGAGGCAGAGATTCACTTTCTT...AACTCTCTGTAGACCAGGCTGGCCTCGAACTTGGAGAACCACCTGCTTCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp GCAAACTGCACTGGAGCTCTGGCTCTTCAGTGCTTCCTGTCTCTGAATCTCCTTCCATACACAGGACGGTaGTCTGAAGTCTTGATCCCA +
Preference number: 4 (lower is better)
Translates to: ANCTGALALQCFLSLNLLPYTGR*SEVLIP
Trigger: TGGGATCAAGACTTCAGACCACCGTCCTGTGTATGG...AAGGAGATTCAGAGACAGGAAGCACTGAAGAGCCAGAGCTCCAGTGCAGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
CDS-3UTR CCA 90 bp GGTTCACTGGAGTCCCAAGTCGTCACTTTTTCCAGCTATTGCTGCTTCTGGCTGCCATACACAGGACGGTaGTCTGAAGTCTTGATCCCA +
Preference number: 4 (lower is better)
Translates to: GSLESQVVTFSSYCCFWLPYTGR*SEVLIP
Trigger: TGGGATCAAGACTTCAGACCACCGTCCTGTGTATGG...CAGCCAGAAGCAGCAATAGCTGGAAAAAGTGACGACTTGGGACTCCAGTGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp AAGTCCTGGCAGGTTCTAGGCATTGAGCATCTAGGATACCAGAGGTTGCCTGATCCCTTGGTCTTGATCTaGGACACGATGCGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: KSWQVLGIEHLGYQRLPDPLVLI*DTMRVV
Trigger: AACTACACGCATCGTGTCTCAGATCAAGACCAAGGG...ATCAGGCAACCTCTGGTATCCTAGATGCTCAATGCCTAGAACCTGCCAGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp GCAAACTGCACTGGAGCTCTGGCTCTTCAGTGCTTCCTGTCTCTGAATCTCCTTCAGATGTCACCCTTGTaGCGGCTTTTGTATAGGACT +
Preference number: 4 (lower is better)
Translates to: ANCTGALALQCFLSLNLLQMSPL*RLLYRT
Trigger: AGTCCTATACAAAAGCCGTCACAAGGGTGACATCTG...AAGGAGATTCAGAGACAGGAAGCACTGAAGAGCCAGAGCTCCAGTGCAGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
CDS-3UTR CCA 90 bp GTCAAAATGTCTGTAGGGAATATCCCAGAATTGAAGTCCTGGCAGGTTCTAGGCTTCGGAGGCTGTCCCTaGAGCATTCTGCCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: VKMSVGNIPELKSWQVLGFGGCP*SILPSS
Trigger: GCTAGAAGGCAGAATGCTCCAGGGACAGCCTCCGAA...GCCTAGAACCTGCCAGGACTTCAATTCTGGGATATTCCCTACAGACATTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp GTCTGGACTACTCCTGAGGACAAAACTGCTGCTTGGTGTCCACATGCCCTGCCAGTTGCTTGTTTTTGCTaGAATGCTGAAAGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: VWTTPEDKTAAWCPHALPVACFC*NAERRH
Trigger: ATGCCTCCTTTCAGCATTCCAGCAAAAACAAGCAAC...TGGCAGGGCATGTGGACACCAAGCAGCAGTTTTGTCCTCAGGAGTAGTCCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp CTACTCAACTGGGGGTTGGGAGCCTGGGACCAGGATGTAGAACCTCAAAGCCTGTTAGTTTGTGGGTTCTaGTTGCTTGTTTTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LLNWGLGAWDQDVEPQSLLVCGF*LLVFAG
Trigger: TCCAGCAAAAACAAGCAACCAGAACCCACAAACTAA...CAGGCTTTGAGGTTCTACATCCTGGTCCCAGGCTCCCAACCCCCAGTTGAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp CTACTCAACTGGGGGTTGGGAGCCTGGGACCAGGATGTAGAACCTCAAAGCCTGGTCAAACTTGTAGGATaGAAGAAAGTGAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: LLNWGLGAWDQDVEPQSLVKLVG*KKVNLC
Trigger: GCAGAGATTCACTTTCTTCCATCCTACAAGTTTGAC...CAGGCTTTGAGGTTCTACATCCTGGTCCCAGGCTCCCAACCCCCAGTTGAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp TTACAGGAGCAGCTGAGAAGAAGCCCATCCTTTGCAGTGACCTTGGCCCCCGTTTCTCTGAATCTCCTTTaGAATCCGCCTTTTAATTCC +
Preference number: 4 (lower is better)
Translates to: LQEQLRRSPSFAVTLAPVSLNLL*NPPFNS
Trigger: GGAATTAAAAGGCGGATTTCAAAGGAGATTCAGAGA...AACGGGGGCCAAGGTCACTGCAAAGGATGGGCTTCTTCTCAGCTGCTCCTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR GCA 90 bp ACCTGTCTGGAACTCTTACCACATCAAACCTTATTCAAGCCAGGAATAGTTGAGAGCTCCTTCTGGCCCTaGATGTTCCAGGTAGCCACG +
Preference number: 4 (lower is better)
Translates to: TCLELLPHQTLFKPGIVESSFWP*MFQVAT
Trigger: CGTGGCTACCTGGAACATGCAGGGCCAGAAGGAGCT...CTCAACTATTCCTGGCTTGAATAAGGTTTGATGTGGTAAGAGTTCCAGACAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp ATACAGATGGAGAACCTGGGCTCTAGCATGAGAACAGGAATAAATAAAAGGAGTCTAGCAGGGCCCCACTaGCCAGAAGACTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: IQMENLGSSMRTGINKRSLAGPH*PEDFPP
Trigger: TGGAGGGAAGTCTTCTGGCCAGTGGGGCCCTGCTAG...ACTCCTTTTATTTATTCCTGTTCTCATGCTAGAGCCCAGGTTCTCCATCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp GATGCTGTTGAGTTTCACCTTATTCGTTGGTTTATTATGGTTCACTGGAGTCCCGCTGGGAGCTCCTTCTaGCCCTGCATGTTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: DAVEFHLIRWFIMVHWSPAGSSF*PCMFQV
Trigger: TACCTGGAACATGCAGGGCCAGAAGGAGCTCCCAGC...GGGACTCCAGTGAACCATAATAAACCAACGAATAAGGTGAAACTCAACAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp ACAGCCGGGGCTACAGAGAAACCTGTCTGGAACTCTTACCACATCAAACCTTATGGCCTCACTTTCACCTaGAACAAGCCATACACAGGA +
Preference number: 4 (lower is better)
Translates to: TAGATEKPVWNSYHIKPYGLTFT*NKPYTG
Trigger: TCCTGTGTATGGCTTGTTCCAGGTGAAAGTGAGGCC...ATAAGGTTTGATGTGGTAAGAGTTCCAGACAGGTTTCTCTGTAGCCCCGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp TCAAAGCCTGTCAAAATGTCTGTAGGGAATATCCCAGAATTGAAGTCCTGGCAGAGCCTGGTGTTGGGATaGGCTTCTTTTCCGTGTTCG +
Preference number: 4 (lower is better)
Translates to: SKPVKMSVGNIPELKSWQSLVLG*ASFPCS
Trigger: CGAACACGGAAAAGAAGCTCATCCCAACACCAGGCT...CTGCCAGGACTTCAATTCTGGGATATTCCCTACAGACATTTTGACAGGCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp TCAAAGCCTGTCAAAATGTCTGTAGGGAATATCCCAGAATTGAAGTCCTGGCAGAGCTGGTGGTGTGTGTaGGGCATGCAAACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: SKPVKMSVGNIPELKSWQSWWCV*GMQTCQ
Trigger: TTGGCAAGTTTGCATGCCTCACACACACCACCAGCT...CTGCCAGGACTTCAATTCTGGGATATTCCCTACAGACATTTTGACAGGCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp TGCATGCAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTTTACAATTGGATAGCTCCTGCTTCTaGTGTCCTTGGTGCGGATGG +
Preference number: 4 (lower is better)
Translates to: CMQTSSKVHSLARKSLQLDSSCF*CPWCGW
Trigger: CCATCCGCACCAAGGACATCAGAAGCAGGAGCTATC...CAATTGTAAACTCTTTCTGGCCAAAGAGTGAACCTTGGAAGAAGTCTGCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR GCA 90 bp AAGTCCTGGCAGGTTCTAGGCATTGAGCATCTAGGATACCAGAGGTTGCCTGATAAGAAAGTGAATCTCTaGCTCCTCAAAGCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: KSWQVLGIEHLGYQRLPDKKVNL*LLKAPE
Trigger: TTCAGGGGCTTTGAGGAGGCAGAGATTCACTTTCTT...ATCAGGCAACCTCTGGTATCCTAGATGCTCAATGCCTAGAACCTGCCAGGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR GCA 90 bp TCTGGGAGAGAAAAGGCTGTCTTCCCAGTAGAATTTGCAGTTCACAGTGGTTTATCCTTTGCTTGGAGGTaGTGTCGTAGGTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SGREKAVFPVEFAVHSGLSFAWR*CRRCPS
Trigger: GGAAGGACACCTACGACAGCACCTCCAAGCAAAGGA...TAAACCACTGTGAACTGCAAATTCTACTGGGAAGACAGCCTTTTCTCTCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp CTACTCCTGAGGACAAAACTGCTGCTTGGTGTCCACATGCCCTGCCATGTGCCTATTTGCCTTAGTTTGTaGGTTCTGGTTGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LLLRTKLLLGVHMPCHVPICLSL*VLVACF
Trigger: AAAACAAGCAACCAGAACCCACAAACTAAGGCAAAT...AGGCACATGGCAGGGCATGTGGACACCAAGCAGCAGTTTTGTCCTCAGGAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp CACAGTGGTTTATTGAAGCAGGTGACTTTCCATATTGGAGAAGCTGATGCTGTTAGCCTGGTGTTGGGATaGGCTTCTTTTCCGTGTTCG +
Preference number: 4 (lower is better)
Translates to: HSGLLKQVTFHIGEADAVSLVLG*ASFPCS
Trigger: CGAACACGGAAAAGAAGCTCATCCCAACACCAGGCT...AACAGCATCAGCTTCTCCAATATGGAAAGTCACCTGCTTCAATAAACCACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp GGGCTACAGAGAAACCTGTCTGGAACTCTTACCACATCAAACCTTATTCAAGCCCAGATGTCACCCTTGTaGCGGCTTTTGTATAGGACT +
Preference number: 4 (lower is better)
Translates to: GLQRNLSGTLTTSNLIQAQMSPL*RLLYRT
Trigger: AGTCCTATACAAAAGCCGTCACAAGGGTGACATCTG...GGCTTGAATAAGGTTTGATGTGGTAAGAGTTCCAGACAGGTTTCTCTGTAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
CDS-3UTR GCA 90 bp TCAAAGCCTGTCAAAATGTCTGTAGGGAATATCCCAGAATTGAAGTCCTGGCAGGACTTAGGTATCTCCTaGAAGGATGTGCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SKPVKMSVGNIPELKSWQDLGIS*KDVLRQ
Trigger: CTGCCTCAGCACATCCTTGCAGGAGATACCTAAGTC...CTGCCAGGACTTCAATTCTGGGATATTCCCTACAGACATTTTGACAGGCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp GGGAGAGAAAAGGCTGTCTTCCCAGTAGAATTTGCAGTTCACAGTGGTTTATTGCCATACACAGGACGGTaGTCTGAAGTCTTGATCCCA +
Preference number: 4 (lower is better)
Translates to: GREKAVFPVEFAVHSGLLPYTGR*SEVLIP
Trigger: TGGGATCAAGACTTCAGACCACCGTCCTGTGTATGG...CAATAAACCACTGTGAACTGCAAATTCTACTGGGAAGACAGCCTTTTCTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp AAGCCTGTCAAAATGTCTGTAGGGAATATCCCAGAATTGAAGTCCTGGCAGGTTGGCCTCACTTTCACCTaGAACAAGCCATACACAGGA +
Preference number: 4 (lower is better)
Translates to: KPVKMSVGNIPELKSWQVGLTFT*NKPYTG
Trigger: TCCTGTGTATGGCTTGTTCCAGGTGAAAGTGAGGCC...AACCTGCCAGGACTTCAATTCTGGGATATTCCCTACAGACATTTTGACAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp GGGAGAGAAAAGGCTGTCTTCCCAGTAGAATTTGCAGTTCACAGTGGTTTATTGGGCCTCACTTTCACCTaGAACAAGCCATACACAGGA +
Preference number: 4 (lower is better)
Translates to: GREKAVFPVEFAVHSGLLGLTFT*NKPYTG
Trigger: TCCTGTGTATGGCTTGTTCCAGGTGAAAGTGAGGCC...CAATAAACCACTGTGAACTGCAAATTCTACTGGGAAGACAGCCTTTTCTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp GGGAGAGAAAAGGCTGTCTTCCCAGTAGAATTTGCAGTTCACAGTGGTTTATTGGATGTTGTCTCGTCCTaGCCTCACTTTCACCTGGAA +
Preference number: 4 (lower is better)
Translates to: GREKAVFPVEFAVHSGLLDVVSS*PHFHLE
Trigger: TTCCAGGTGAAAGTGAGGCCAGGACGAGACAACATC...CAATAAACCACTGTGAACTGCAAATTCTACTGGGAAGACAGCCTTTTCTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp AGGAGGATACAGATGGAGAACCTGGGCTCTAGCATGAGAACAGGAATAAATAAATTTGTCTCTGAACCCTaGGAGTCAGAGGCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: RRIQMENLGSSMRTGINKFVSEP*ESEAGK
Trigger: CTTACCAGCCTCTGACTCTCAGGGTTCAGAGACAAA...TTTATTTATTCCTGTTCTCATGCTAGAGCCCAGGTTCTCCATCTGTATCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp AGGAGGATACAGATGGAGAACCTGGGCTCTAGCATGAGAACAGGAATAAATAAAGGTCCAAGGAGGTGCTaGTCATTCCAGAAAGACAGT +
Preference number: 4 (lower is better)
Translates to: RRIQMENLGSSMRTGINKGPRRC*SFQKDS
Trigger: ACTGTCTTTCTGGAATGATCAGCACCTCCTTGGACC...TTTATTTATTCCTGTTCTCATGCTAGAGCCCAGGTTCTCCATCTGTATCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR GCA 90 bp TGCATGCAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTTTACAATTGGACTTAGGTATCTCCTaGAAGGATGTGCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CMQTSSKVHSLARKSLQLDLGIS*KDVLRQ
Trigger: CTGCCTCAGCACATCCTTGCAGGAGATACCTAAGTC...CAATTGTAAACTCTTTCTGGCCAAAGAGTGAACCTTGGAAGAAGTCTGCATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR GCA 90 bp AGAGAAACCTGTCTGGAACTCTTACCACATCAAACCTTATTCAAGCCAGGAATATCCACCTCAGGTTTCTaGTTCAGGAAGGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: RETCLELLPHQTLFKPGISTSGF*FRKAST
Trigger: TGTGGAGGCCTTCCTGAAGCAGAAACCTGAGGTGGA...TATTCCTGGCTTGAATAAGGTTTGATGTGGTAAGAGTTCCAGACAGGTTTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp AGCCTGTCTGGGAGAGAAAAGGCTGTCTTCCCAGTAGAATTTGCAGTTCACAGTAAGAGGAATACTTCATaGGACAGATGTCACCCTTGT +
Preference number: 4 (lower is better)
Translates to: SLSGREKAVFPVEFAVHSKRNTS*DRCHPC
Trigger: ACAAGGGTGACATCTGTCCCATGAAGTATTCCTCTT...ACTGTGAACTGCAAATTCTACTGGGAAGACAGCCTTTTCTCTCCCAGACAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp CACAGTGGTTTATTGAAGCAGGTGACTTTCCATATTGGAGAAGCTGATGCTGTTGTACTTGTCTCGTCCTaGCCTCACTTTCACCTGGAA +
Preference number: 4 (lower is better)
Translates to: HSGLLKQVTFHIGEADAVVLVSS*PHFHLE
Trigger: TTCCAGGTGAAAGTGAGGCCAGGACGAGACAAGTAC...AACAGCATCAGCTTCTCCAATATGGAAAGTCACCTGCTTCAATAAACCACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131109.8
CDS-3UTR TCA 90 bp CACAGTGGTTTATTGAAGCAGGTGACTTTCCATATTGGAGAAGCTGATGCTGTTCAGATGTCACCCTTGTaGCGGCTTTTGTATAGGACT +
Preference number: 4 (lower is better)
Translates to: HSGLLKQVTFHIGEADAVQMSPL*RLLYRT
Trigger: AGTCCTATACAAAAGCCGTCACAAGGGTGACATCTG...AACAGCATCAGCTTCTCCAATATGGAAAGTCACCTGCTTCAATAAACCACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
CDS-3UTR GCA 90 bp CCTGTCAAAATGTCTGTAGGGAATATCCCAGAATTGAAGTCCTGGCAGGTTCTAAAGAAAGTGAATCTCTaGCTCCTCAAAGCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: PVKMSVGNIPELKSWQVLKKVNL*LLKAPE
Trigger: TTCAGGGGCTTTGAGGAGGCAGAGATTCACTTTCTT...TAGAACCTGCCAGGACTTCAATTCTGGGATATTCCCTACAGACATTTTGACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp TTTGAAGAGACAGCAGTGCTCAAGGGCAAGAAGTCTGGACTACTCCTGAGGACAATTTGCCTTAGTTTGTaGGTTCTGGTTGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: FEETAVLKGKKSGLLLRTICLSL*VLVACF
Trigger: AAAACAAGCAACCAGAACCCACAAACTAAGGCAAAT...TGTCCTCAGGAGTAGTCCAGACTTCTTGCCCTTGAGCACTGCTGTCTCTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
3UTR CAA 72 bp AAGCCTGTCAAAATGTCTGTAGGGAATATCCCAGAATaGAAGTCCTGGCAGGTTCTAGGCATTGAGCATCTA +
Preference number: 4 (lower is better)
Translates to: KPVKMSVGNIPE*KSWQVLGIEHL
Trigger: TAGATGCTCAATGCCTAGAACCTGCCAGGACTTCAATTCTGGGATATTCCCTACAGACATTTTGACAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp AGAGAAACCTGTCTGGAACTCTTACCACATCAAACCTTATTCAAGCCAGGAATAAGTGCTTCCTGTCTCTaGATCTCCTTTGAAATCCGC +
Preference number: 4 (lower is better)
Translates to: RETCLELLPHQTLFKPGISASCL*ISFEIR
Trigger: GCGGATTTCAAAGGAGATTCAGAGACAGGAAGCACT...TATTCCTGGCTTGAATAAGGTTTGATGTGGTAAGAGTTCCAGACAGGTTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR GCA 90 bp AGGAGGATACAGATGGAGAACCTGGGCTCTAGCATGAGAACAGGAATAAATAAACTGGTTGCTTGTTTTTaGTGGAATGCTGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RRIQMENLGSSMRTGINKLVACF*WNAERR
Trigger: CCTCCTTTCAGCATTCCAGCAAAAACAAGCAACCAG...TTTATTTATTCCTGTTCTCATGCTAGAGCCCAGGTTCTCCATCTGTATCCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR GCA 90 bp GATGCTGTTGAGTTTCACCTTATTCGTTGGTTTATTATGGTTCACTGGAGTCCCCTGGTTGCTTGTTTTTaGTGGAATGCTGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: DAVEFHLIRWFIMVHWSPLVACF*WNAERR
Trigger: CCTCCTTTCAGCATTCCAGCAAAAACAAGCAACCAG...GGGACTCCAGTGAACCATAATAAACCAACGAATAAGGTGAAACTCAACAGCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp AAGCCTGTCAAAATGTCTGTAGGGAATATCCCAGAATTGAAGTCCTGGCAGGTTAAGAGGAATACTTCATaGGACAGATGTCACCCTTGT +
Preference number: 4 (lower is better)
Translates to: KPVKMSVGNIPELKSWQVKRNTS*DRCHPC
Trigger: ACAAGGGTGACATCTGTCCCATGAAGTATTCCTCTT...AACCTGCCAGGACTTCAATTCTGGGATATTCCCTACAGACATTTTGACAGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR TCA 90 bp ATATTGGAGAAGCTGATGCTGTTGAGTTTCACCTTATTCGTTGGTTTATTATGGGGTGGTCTGAAGTCTTaGTCCCAGGACAAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: ILEKLMLLSFTLFVGLLWGGLKS*SQDKRN
Trigger: ATTCCTCTTGTCCTGGGATCAAGACTTCAGACCACC...CCATAATAAACCAACGAATAAGGTGAAACTCAACAGCATCAGCTTCTCCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp AGGAGGATACAGATGGAGAACCTGGGCTCTAGCATGAGAACAGGAATAAATAAAGTTGCTTGTTTTTGCTaGAATGCTGAAAGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: RRIQMENLGSSMRTGINKVACFC*NAERRH
Trigger: ATGCCTCCTTTCAGCATTCCAGCAAAAACAAGCAAC...TTTATTTATTCCTGTTCTCATGCTAGAGCCCAGGTTCTCCATCTGTATCCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp ACTTTCCATATTGGAGAAGCTGATGCTGTTGAGTTTCACCTTATTCGTTGGTTTTCTAATGGGTGGCTGTaGGGTGATGAGATTTGCCTT +
Preference number: 4 (lower is better)
Translates to: TFHIGEADAVEFHLIRWFSNGWL*GDEICL
Trigger: AAGGCAAATCTCATCACCCCACAGCCACCCATTAGA...AAACCAACGAATAAGGTGAAACTCAACAGCATCAGCTTCTCCAATATGGAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp GGGAGAGAAAAGGCTGTCTTCCCAGTAGAATTTGCAGTTCACAGTGGTTTATTGGTCAAACTTGTAGGATaGAAGAAAGTGAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: GREKAVFPVEFAVHSGLLVKLVG*KKVNLC
Trigger: GCAGAGATTCACTTTCTTCCATCCTACAAGTTTGAC...CAATAAACCACTGTGAACTGCAAATTCTACTGGGAAGACAGCCTTTTCTCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000131109.8
ENSMUST00000145701.8
3UTR CAA 72 bp CCAAGATGCATGCAGACTTCTTCCAAGGTTCACTCTTaGGCCAGAAAGAGTTTACAATTGAATATATCCTTA +
Preference number: 4 (lower is better)
Translates to: PRCMQTSSKVHS*ARKSLQLNISL
Trigger: TAAGGATATATTCAATTGTAAACTCTTTCTGGCCAAAGAGTGAACCTTGGAAGAAGTCTGCATGCATCTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR CCA 90 bp CAGACTTCTTCCAAGGTTCACTCTTTGGCCAGAAAGAGTTTACAATTGAATATAGTCAAACTTGTAGGATaGAAGAAAGTGAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: QTSSKVHSLARKSLQLNIVKLVG*KKVNLC
Trigger: GCAGAGATTCACTTTCTTCCATCCTACAAGTTTGAC...TATATTCAATTGTAAACTCTTTCTGGCCAAAGAGTGAACCTTGGAAGAAGTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS CCA 90 bp AGTGTAGTCAGCCTCGGTGGGGAGCAGAAACTCATCCAGGCTCGCTaGGAGCTCCTTCTGGCCCTGCATGTTCCAGGTAGCCACGAAGAG +
Preference number: 5 (lower is better)
Translates to: SVVSLGGEQKLIQAR*ELLLALHVPGSHEE
Trigger: CTCTTCGTGGCTACCTGGAACATGCAGGGCCAGAAGGAGCTCCCAGCGAGCCTGGATGAGTTTCTGCTCCCCACCGAGGCTGACTACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000114090.8
ENSMUST00000144011.3
ENSMUST00000145701.8
CDS-3UTR CAA 90 bp AGGCAGAAGCAGGTGGTTCTCCAAGTTCGAGGCCAGCCTGGTCTACAGAGAGTTCTGCTAGGGCCCAGGTaGCTGTGGGCCCTGACCAGT +
Preference number: 5 (lower is better)
Translates to: RQKQVVLQVRGQPGLQRVLLGPR*LWALTS
Trigger: ACTGGTCAGGGCCCACAGCAACCTGGGCCCTAGCAG...AACTCTCTGTAGACCAGGCTGGCCTCGAACTTGGAGAACCACCTGCTTCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR CAA 90 bp CATGTGCCTGTGGGAACATGGTATAAATGTCCTGAGGGCTGGGTCTGTGGTGAGCTGCTAGGGCCCAGGTaGCTGTGGGCCCTGACCAGT +
Preference number: 5 (lower is better)
Translates to: HVPVGTWYKCPEGWVCGELLGPR*LWALTS
Trigger: ACTGGTCAGGGCCCACAGCAACCTGGGCCCTAGCAG...CTCACCACAGACCCAGCCCTCAGGACATTTATACCATGTTCCCACAGGCACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS TCA 90 bp GTGTCTCCCACTCCCGCCTGTCAGAGCAGCCCTCCTGAATTCCAATaGCATACAGGTCCTGAGTGTAGTCAGCCTCGGTGGGGAGCAGAA +
Preference number: 5 (lower is better)
Translates to: VSPTPACQSSPPEFQ*HTGPECSQPRWGAE
Trigger: TTCTGCTCCCCACCGAGGCTGACTACACTCAGGACCTGTATGTCATTGGAATTCAGGAGGGCTGCTCTGACAGGCGGGAGTGGGAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS GCA 90 bp CTGCATGCGGAGCTTGTAGTCCGTGTGCTCGGGGTCAACCTTGTTTaGTGTTCTCAGGGAGCTGGAGGCTATGCTGAGGTCCATAGCTGG +
Preference number: 5 (lower is better)
Translates to: LHAELVVRVLGVNLV*CSQGAGGYAEVHSW
Trigger: CCAGCTATGGACCTCAGCATAGCCTCCAGCTCCCTGAGAACAGCAAACAAGGTTGACCCCGAGCACACGGACTACAAGCTCCGCATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS CCA 90 bp CAAGGAGGTGCTGATCATTCCAGAAAGACAGTCACTCCACAAGGATaGGCTCCCTCCCTCACTGCCTGTGGCCCTTCGGGACTTAGGTAT +
Preference number: 5 (lower is better)
Translates to: QGGADHSRKTVTPQG*APSLTACGPSGLRY
Trigger: ATACCTAAGTCCCGAAGGGCCACAGGCAGTGAGGGAGGGAGCCCATCCTTGTGGAGTGACTGTCTTTCTGGAATGATCAGCACCTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS CCA 90 bp CTGAAGATGGACCCTTTCTTCATCTCCCGGGTGAGCTGGTCGTGTTaGAGGAGAGCCAGCACATCCACCTCAGGTTTCTGCTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: LKMDPFFISRVSWSC*RRASTSTSGFCFRK
Trigger: CTTCCTGAAGCAGAAACCTGAGGTGGATGTGCTGGCTCTCCTCCAACACGACCAGCTCACCCGGGAGATGAAGAAAGGGTCCATCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS CCA 90 bp CCGGCAGCTAATGGGATGTTGTCTCGTCCTGGCCTCACTTTCACCTaGAACAAGCCATACACAGGACGGTGGTCTGAAGTCTTGATCCCA +
Preference number: 5 (lower is better)
Translates to: PAANGMLSRPGLTFT*NKPYTGRWSEVLIP
Trigger: TGGGATCAAGACTTCAGACCACCGTCCTGTGTATGGCTTGTTCCAGGTGAAAGTGAGGCCAGGACGAGACAACATCCCATTAGCTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS TCA 90 bp GATCTGAGACACGATGCGTGTAGTTACTGTGGAGTACTCGACCTCTaGGCAGAACCAGATGAGGTCCCTGTCAGAGCAGCCCTCCTGAAT +
Preference number: 5 (lower is better)
Translates to: DLRHDACSYCGVLDL*AEPDEVPVRAALLN
Trigger: ATTCAGGAGGGCTGCTCTGACAGGGACCTCATCTGGTTCTGCTCAGAGGTCGAGTACTCCACAGTAACTACACGCATCGTGTCTCAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144011.3
CDS CCA 90 bp TGTGAGCAGGGACAGTACTTGTCTCGTCCTGGCCTCACTTTCACCTaGAACAAGCCATACACAGGACGGTGGTCTGAAGTCTTGATCCCA +
Preference number: 5 (lower is better)
Translates to: CEQGQYLSRPGLTFT*NKPYTGRWSEVLIP
Trigger: TGGGATCAAGACTTCAGACCACCGTCCTGTGTATGGCTTGTTCCAGGTGAAAGTGAGGCCAGGACGAGACAAGTACTGTCCCTGCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131109.8
CDS-3UTR CAA 90 bp AGTGACCTTGGCCCCCGTTGCTGTGGCCAGTCCTGGTCTGGAATCTTCAGGACAGAGATTTGCCTTAGTTaGTGGGTTCTGGTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: SDLGPRCCGQSWSGIFRTEICLS*WVLVAC
Trigger: ACAAGCAACCAGAACCCACAAACTAAGGCAAATCTC...TGTCCTGAAGATTCCAGACCAGGACTGGCCACAGCAACGGGGGCCAAGGTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114090.8
CDS-3UTR CAA 90 bp CTACTCAACTGGGGGTTGGGAGCCTGGGACCAGGATGTAGAACCTCAAAGCCTGGTTTGTGGGTTCTGGTaGCTTGTTTTTGCTGGAATG +
Preference number: 5 (lower is better)
Translates to: LLNWGLGAWDQDVEPQSLVCGFW*LVFAGM
Trigger: CATTCCAGCAAAAACAAGCAACCAGAACCCACAAAC...CAGGCTTTGAGGTTCTACATCCTGGTCCCAGGCTCCCAACCCCCAGTTGAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS CCA 90 bp GGCTTTTGTATAGGACTCGGTCTGTGTAGGAGGGTGTCCTTTGCTTaGAGGTGCTGTCGTAGGTGTCCTTCCCAATGTCAAACTTGTAGG +
Preference number: 5 (lower is better)
Translates to: GFCIGLGLCRRVSFA*RCCRRCPSQCQTCR
Trigger: CCTACAAGTTTGACATTGGGAAGGACACCTACGACAGCACCTCCAAGCAAAGGACACCCTCCTACACAGACCGAGTCCTATACAAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000114090.8
ENSMUST00000131109.8
ENSMUST00000145701.8
CDS-3UTR CAA 90 bp GCCTGTCAAAATGTCTGTAGGGAATATCCCAGAATTGAAGTCCTGGCAGGTTCTCGGGGTCAACCTTGTTaGCTGTTCTCAGGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: ACQNVCREYPRIEVLAGSRGQPC*LFSGSW
Trigger: CCAGCTCCCTGAGAACAGCAAACAAGGTTGACCCCG...AGAACCTGCCAGGACTTCAATTCTGGGATATTCCCTACAGACATTTTGACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS TCA 90 bp TGGCCTCACTTTCACCTGGAACAAGCCATACACAGGACGGTGGTCTaGAGTCTTGATCCCAGGACAAGAGGAATACTTCATGGGACAGAT +
Preference number: 5 (lower is better)
Translates to: WPHFHLEQAIHRTVV*SLDPRTRGILHGTD
Trigger: ATCTGTCCCATGAAGTATTCCTCTTGTCCTGGGATCAAGACTTCAGACCACCGTCCTGTGTATGGCTTGTTCCAGGTGAAAGTGAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000114090.8
ENSMUST00000131109.8
ENSMUST00000145701.8
CDS GCA 90 bp TGTATAGGACTCGGTCTGTGTAGGAGGGTGTCCTTTGCTTGGAGGTaGTGTCGTAGGTGTCCTTCCCAATGTCAAACTTGTAGGATGGAA +
Preference number: 5 (lower is better)
Translates to: CIGLGLCRRVSFAWR*CRRCPSQCQTCRME
Trigger: TTCCATCCTACAAGTTTGACATTGGGAAGGACACCTACGACAGCACCTCCAAGCAAAGGACACCCTCCTACACAGACCGAGTCCTATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000114090.8
ENSMUST00000131109.8
ENSMUST00000145701.8
CDS-3UTR CAA 90 bp CTACAGAGAAACCTGTCTGGAACTCTTACCACATCAAACCTTATTCAAGCCAGGGAGCAGGGACAGTACTaGTCTCGTCCTGGCCTCACT +
Preference number: 5 (lower is better)
Translates to: LQRNLSGTLTTSNLIQAREQGQY*SRPGLT
Trigger: AGTGAGGCCAGGACGAGACAAGTACTGTCCCTGCTC...CCTGGCTTGAATAAGGTTTGATGTGGTAAGAGTTCCAGACAGGTTTCTCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131109.8
CDS GCA 90 bp GTCCTTCCCAATGTCAAACTTGTAGGATGGAAGAAAGTGAATCTCTaGCTCCTCAAAGCCCCTGAAGATGGACCCTTTCTTCATCTCCCG +
Preference number: 5 (lower is better)
Translates to: VLPNVKLVGWKKVNL*LLKAPEDGPFLHLP
Trigger: CGGGAGATGAAGAAAGGGTCCATCTTCAGGGGCTTTGAGGAGGCAGAGATTCACTTTCTTCCATCCTACAAGTTTGACATTGGGAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000114090.8
ENSMUST00000131109.8
ENSMUST00000145701.8
CDS TCA 90 bp GTGCAAACTGCACTGGAGCTCTGGCTCTTCAGTGCTTCCTGTCTCTaGATCTCCTTTGAAATCCGCCTTTTAATTCCTATCAAGTACAAT +
Preference number: 5 (lower is better)
Translates to: VQTALELWLFSASCL*ISFEIRLLIPIKYN
Trigger: ATTGTACTTGATAGGAATTAAAAGGCGGATTTCAAAGGAGATTCAGAGACAGGAAGCACTGAAGAGCCAGAGCTCCAGTGCAGTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS-3UTR CAA 90 bp AAGCCTGTCAAAATGTCTGTAGGGAATATCCCAGAATTGAAGTCCTGGCAGGTTGAGATTTGCCTTAGTTaGTGGGTTCTGGTTGCTTGT +
Preference number: 5 (lower is better)
Translates to: KPVKMSVGNIPELKSWQVEICLS*WVLVAC
Trigger: ACAAGCAACCAGAACCCACAAACTAAGGCAAATCTC...AACCTGCCAGGACTTCAATTCTGGGATATTCCCTACAGACATTTTGACAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS-3UTR CAA 90 bp AGAGAAACCTGTCTGGAACTCTTACCACATCAAACCTTATTCAAGCCAGGAATACACTTTTTCCAGCTATaGCTGCTTCTGGCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: RETCLELLPHQTLFKPGIHFFQL*LLLAVS
Trigger: GCTCACAGCCAGAAGCAGCAATAGCTGGAAAAAGTG...TATTCCTGGCTTGAATAAGGTTTGATGTGGTAAGAGTTCCAGACAGGTTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131109.8
CDS-3UTR CAA 90 bp GGATGTAGAACCTCAAAGCCTGTCAAAATGTCTGTAGGGAATATCCCAGAATTGGTTTGTGGGTTCTGGTaGCTTGTTTTTGCTGGAATG +
Preference number: 5 (lower is better)
Translates to: GCRTSKPVKMSVGNIPELVCGFW*LVFAGM
Trigger: CATTCCAGCAAAAACAAGCAACCAGAACCCACAAAC...CAATTCTGGGATATTCCCTACAGACATTTTGACAGGCTTTGAGGTTCTACATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS CCA 72 bp AAGGGGCTCCGGGGTCTGCTAGGGCCCAGGTTGCTGTaGGCCCTGACCAGTCTGGTCTGCATGCGGAGCTTG +
Preference number: 6 (lower is better)
Translates to: KGLRGLLGPRLL*ALTSLVCMRSL
Trigger: CAAGCTCCGCATGCAGACCAGACTGGTCAGGGCCCACAGCAACCTGGGCCCTAGCAGACCCCGGAGCCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS TCA 72 bp CAGGGACTGGCCCCATTCTGGACAGTCAGATCCTCCTaGCTACCCCGGAAACGCCTCCTTCTCCAGCCCTTG +
Preference number: 6 (lower is better)
Translates to: QGLAPFWTVRSS*LPRKRLLLQPL
Trigger: CAAGGGCTGGAGAAGGAGGCGTTTCCGGGGTAGTCAGGAGGATCTGACTGTCCAGAATGGGGCCAGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS CCA 72 bp ACCTGGCCAGCTCTTCTGCTCCTAGCAGGGCCCCACTaGCCAGAAGACTTCCCTCCAGATAGCTCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: TWPALLLLAGPH*PEDFPPDSSCF
Trigger: GAAGCAGGAGCTATCTGGAGGGAAGTCTTCTGGCCAGTGGGGCCCTGCTAGGAGCAGAAGAGCTGGCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS CCA 72 bp CCACGAAGAGAGCCATGTTTCGGTCTGGGAAGTACCTaGCCAGCTCTTCTGCTCCTAGCAGGGCCCCACTGG +
Preference number: 6 (lower is better)
Translates to: PRREPCFGLGST*PALLLLAGPHW
Trigger: CCAGTGGGGCCCTGCTAGGAGCAGAAGAGCTGGCCAGGTACTTCCCAGACCGAAACATGGCTCTCTTCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000114090.8
ENSMUST00000144011.3
ENSMUST00000145701.8
CDS GCA 72 bp TGTTGGAGGAGAGCCAGCACATCCACCTCAGGTTTCTaGTTCAGGAAGGCCTCCACAGCCACTCGTCCACCA +
Preference number: 6 (lower is better)
Translates to: CWRRASTSTSGF*FRKASTATRPP
Trigger: TGGTGGACGAGTGGCTGTGGAGGCCTTCCTGAAGCAGAAACCTGAGGTGGATGTGCTGGCTCTCCTCCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000114090.8
ENSMUST00000144011.3
ENSMUST00000145701.8
CDS CCA 72 bp GCTGATCATTCCAGAAAGACAGTCACTCCACAAGGATaGGCTCCCTCCCTCACTGCCTGTGGCCCTTCGGGA +
Preference number: 6 (lower is better)
Translates to: ADHSRKTVTPQG*APSLTACGPSG
Trigger: TCCCGAAGGGCCACAGGCAGTGAGGGAGGGAGCCCATCCTTGTGGAGTGACTGTCTTTCTGGAATGATCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS CAA 72 bp GGACCCTTTCTTCATCTCCCGGGTGAGCTGGTCGTGTaGGAGGAGAGCCAGCACATCCACCTCAGGTTTCTG +
Preference number: 6 (lower is better)
Translates to: GPFLHLPGELVV*EESQHIHLRFL
Trigger: CAGAAACCTGAGGTGGATGTGCTGGCTCTCCTCCAACACGACCAGCTCACCCGGGAGATGAAGAAAGGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS TCA 72 bp ACTCCCGCCTGTCAGAGCAGCCCTCCTGAATTCCAATaGCATACAGGTCCTGAGTGTAGTCAGCCTCGGTGG +
Preference number: 6 (lower is better)
Translates to: TPACQSSPPEFQ*HTGPECSQPRW
Trigger: CCACCGAGGCTGACTACACTCAGGACCTGTATGTCATTGGAATTCAGGAGGGCTGCTCTGACAGGCGGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS TCA 72 bp GTGAAGCTGACGCCCAGGGCCCCCTTGGTCTTGATCTaGGACACGATGCGTGTAGTTACTGTGGAGTACTCG +
Preference number: 6 (lower is better)
Translates to: VKLTPRAPLVLI*DTMRVVTVEYS
Trigger: CGAGTACTCCACAGTAACTACACGCATCGTGTCTCAGATCAAGACCAAGGGGGCCCTGGGCGTCAGCTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000114090.8
ENSMUST00000144011.3
ENSMUST00000145701.8
CDS GCA 72 bp GAGCTTGTAGTCCGTGTGCTCGGGGTCAACCTTGTTTaGTGTTCTCAGGGAGCTGGAGGCTATGCTGAGGTC +
Preference number: 6 (lower is better)
Translates to: ELVVRVLGVNLV*CSQGAGGYAEV
Trigger: GACCTCAGCATAGCCTCCAGCTCCCTGAGAACAGCAAACAAGGTTGACCCCGAGCACACGGACTACAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS CCA 72 bp CTGAAGATGGACCCTTTCTTCATCTCCCGGGTGAGCTaGTCGTGTTGGAGGAGAGCCAGCACATCCACCTCA +
Preference number: 6 (lower is better)
Translates to: LKMDPFFISRVS*SCWRRASTSTS
Trigger: TGAGGTGGATGTGCTGGCTCTCCTCCAACACGACCAGCTCACCCGGGAGATGAAGAAAGGGTCCATCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000114090.8
ENSMUST00000131109.8
ENSMUST00000145701.8
CDS CAA 90 bp CCTGAAGATGGACCCTTTCTTCATCTCCCGGGTGAGCTGGTCGTGTaGGAGGAGAGCCAGCACATCCACCTCAGGTTTCTGCTTCAGGAA +
Preference number: 6 (lower is better)
Translates to: PEDGPFLHLPGELVV*EESQHIHLRFLLQE
Trigger: TTCCTGAAGCAGAAACCTGAGGTGGATGTGCTGGCTCTCCTCCAACACGACCAGCTCACCCGGGAGATGAAGAAAGGGTCCATCTTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS TCA 72 bp GAGAGTCAGAGGCTGGTAAGAAGCCTGGTGTTGGGATaGGCTTCTTTTCCGTGTTCGGAGGCTGTCCCTGGA +
Preference number: 6 (lower is better)
Translates to: ESQRLVRSLVLG*ASFPCSEAVPG
Trigger: TCCAGGGACAGCCTCCGAACACGGAAAAGAAGCTCATCCCAACACCAGGCTTCTTACCAGCCTCTGACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS TCA 72 bp CACGATGCGTGTAGTTACTGTGGAGTACTCGACCTCTaGGCAGAACCAGATGAGGTCCCTGTCAGAGCAGCC +
Preference number: 6 (lower is better)
Translates to: HDACSYCGVLDL*AEPDEVPVRAA
Trigger: GGCTGCTCTGACAGGGACCTCATCTGGTTCTGCTCAGAGGTCGAGTACTCCACAGTAACTACACGCATCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144011.3
CDS CAA 72 bp CAGCCCTTGTCATCGAGGGACAGGGTTCGCTCCAACTaGGGTCTAATGGGTGGCTGTGGGGTGATGAGATTT +
Preference number: 6 (lower is better)
Translates to: QPLSSRDRVRSN*GLMGGCGVMRF
Trigger: AAATCTCATCACCCCACAGCCACCCATTAGACCCAAGTTGGAGCGAACCCTGTCCCTCGATGACAAGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS CAA 90 bp CTCCTTCTCCAGCCCTTGTCATCGAGGGACAGGGTTCGCTCCAACTaGGGTCTAATGGGTGGCTGTGGGGTGATGAGATTTGCCTTAGTT +
Preference number: 6 (lower is better)
Translates to: LLLQPLSSRDRVRSN*GLMGGCGVMRFALV
Trigger: AACTAAGGCAAATCTCATCACCCCACAGCCACCCATTAGACCCAAGTTGGAGCGAACCCTGTCCCTCGATGACAAGGGCTGGAGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS TCA 72 bp ATGCTGAAAGGAGGCATGGGGTTTGTCTCTGAACCCTaGGAGTCAGAGGCTGGTAAGAAGCCTGGTGTTGGG +
Preference number: 6 (lower is better)
Translates to: MLKGGMGFVSEP*ESEAGKKPGVG
Trigger: CCCAACACCAGGCTTCTTACCAGCCTCTGACTCTCAGGGTTCAGAGACAAACCCCATGCCTCCTTTCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS TCA 72 bp TTACTGTGGAGTACTCGACCTCTGAGCAGAACCAGATaGGGTCCCTGTCAGAGCAGCCCTCCTGAATTCCAA +
Preference number: 6 (lower is better)
Translates to: LLWSTRPLSRTR*GPCQSSPPEFQ
Trigger: TTGGAATTCAGGAGGGCTGCTCTGACAGGGACCTCATCTGGTTCTGCTCAGAGGTCGAGTACTCCACAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000144011.3
CDS GCA 72 bp CCAGAAGACCTCATCAAACCGGGTAGTGACATCCCCTaGACTAGAGCGGTAGGGATTTGTGTCTGGCACATT +
Preference number: 6 (lower is better)
Translates to: PEDLIKPGSDIP*TRAVGICVWHI
Trigger: AATGTGCCAGACACAAATCCCTACCGCTCTAGTGCAGGGGATGTCACTACCCGGTTTGATGAGGTCTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000114090.8
ENSMUST00000144011.3
ENSMUST00000145701.8
CDS GCA 72 bp CTCGGTCTGTGTAGGAGGGTGTCCTTTGCTTGGAGGTaGTGTCGTAGGTGTCCTTCCCAATGTCAAACTTGT +
Preference number: 6 (lower is better)
Translates to: LGLCRRVSFAWR*CRRCPSQCQTC
Trigger: ACAAGTTTGACATTGGGAAGGACACCTACGACAGCACCTCCAAGCAAAGGACACCCTCCTACACAGACCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000114090.8
ENSMUST00000131109.8
ENSMUST00000145701.8
CDS CAA 90 bp ACTTTCACCTGGAACAAGCCATACACAGGACGGTGGTCTGAAGTCTaGATCCCAGGACAAGAGGAATACTTCATGGGACAGATGTCACCC +
Preference number: 6 (lower is better)
Translates to: TFTWNKPYTGRWSEV*IPGQEEYFMGQMSP
Trigger: GGGTGACATCTGTCCCATGAAGTATTCCTCTTGTCCTGGGATCAAGACTTCAGACCACCGTCCTGTGTATGGCTTGTTCCAGGTGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000114090.8
ENSMUST00000131109.8
ENSMUST00000145701.8
CDS CAA 72 bp TGGAACAAGCCATACACAGGACGGTGGTCTGAAGTCTaGATCCCAGGACAAGAGGAATACTTCATGGGACAG +
Preference number: 6 (lower is better)
Translates to: WNKPYTGRWSEV*IPGQEEYFMGQ
Trigger: CTGTCCCATGAAGTATTCCTCTTGTCCTGGGATCAAGACTTCAGACCACCGTCCTGTGTATGGCTTGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000114090.8
ENSMUST00000131109.8
ENSMUST00000145701.8
CDS TCA 72 bp TTTGTGGGTTCTGGTTGCTTGTTTTTGCTGGAATGCTaGAAGGAGGCATGGGGTTTGTCTCTGAACCCTGAG +
Preference number: 6 (lower is better)
Translates to: FVGSGCLFLLEC*KEAWGLSLNPE
Trigger: CTCAGGGTTCAGAGACAAACCCCATGCCTCCTTTCAGCATTCCAGCAAAAACAAGCAACCAGAACCCACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS CCA 72 bp GGGTGGCTGTGGGGTGATGAGATTTGCCTTAGTTTGTaGGTTCTGGTTGCTTGTTTTTGCTGGAATGCTGAA +
Preference number: 6 (lower is better)
Translates to: GWLWGDEICLSL*VLVACFCWNAE
Trigger: TTCAGCATTCCAGCAAAAACAAGCAACCAGAACCCACAAACTAAGGCAAATCTCATCACCCCACAGCCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS CAA 90 bp GAAATCCGCCTTTTAATTCCTATCAAGTACAATTCTCGGTCAAACTaGCCGGCAGCTAATGGGATGTTGTCTCGTCCTGGCCTCACTTTC +
Preference number: 6 (lower is better)
Translates to: EIRLLIPIKYNSRSN*PAANGMLSRPGLTF
Trigger: GAAAGTGAGGCCAGGACGAGACAACATCCCATTAGCTGCCGGCAAGTTTGACCGAGAATTGTACTTGATAGGAATTAAAAGGCGGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS TCA 72 bp GCACTGGAGCTCTGGCTCTTCAGTGCTTCCTGTCTCTaGATCTCCTTTGAAATCCGCCTTTTAATTCCTATC +
Preference number: 6 (lower is better)
Translates to: ALELWLFSASCL*ISFEIRLLIPI
Trigger: GATAGGAATTAAAAGGCGGATTTCAAAGGAGATTCAGAGACAGGAAGCACTGAAGAGCCAGAGCTCCAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8
CDS CAA 72 bp GGGGTGATGAGATTTGCCTTAGTTTGTGGGTTCTGGTaGCTTGTTTTTGCTGGAATGCTGAAAGGAGGCATG +
Preference number: 6 (lower is better)
Translates to: GVMRFALVCGFW*LVFAGMLKGGM
Trigger: CATGCCTCCTTTCAGCATTCCAGCAAAAACAAGCAACCAGAACCCACAAACTAAGGCAAATCTCATCACCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS CAA 72 bp AATGGGTGGCTGTGGGGTGATGAGATTTGCCTTAGTTaGTGGGTTCTGGTTGCTTGTTTTTGCTGGAATGCT +
Preference number: 6 (lower is better)
Translates to: NGWLWGDEICLS*WVLVACFCWNA
Trigger: AGCATTCCAGCAAAAACAAGCAACCAGAACCCACAAACTAAGGCAAATCTCATCACCCCACAGCCACCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS GCA 72 bp ATTTGCCTTAGTTTGTGGGTTCTGGTTGCTTGTTTTTaGTGGAATGCTGAAAGGAGGCATGGGGTTTGTCTC +
Preference number: 6 (lower is better)
Translates to: ICLSLWVLVACF*WNAERRHGVCL
Trigger: GAGACAAACCCCATGCCTCCTTTCAGCATTCCAGCAAAAACAAGCAACCAGAACCCACAAACTAAGGCAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114090.8
ENSMUST00000145701.8
CDS CAA 72 bp CTTTTAATTCCTATCAAGTACAATTCTCGGTCAAACTaGCCGGCAGCTAATGGGATGTTGTCTCGTCCTGGC +
Preference number: 6 (lower is better)
Translates to: LLIPIKYNSRSN*PAANGMLSRPG
Trigger: GCCAGGACGAGACAACATCCCATTAGCTGCCGGCAAGTTTGACCGAGAATTGTACTTGATAGGAATTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000145701.8