Pregenerated sensors for INPP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026102Ensembl transcript IDs: ENSMUST00000027271.9, ENSMUST00000159725.2, ENSMUST00000162576.8, ENSMUST00000177279.8
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCACTCTTTCATGTCTACAATGCCCCCACCCATGGCCCTCAGAATaGCGTGGGCGGCACAGGAGTCCCACTTGTACGTGGTGTCCTCTG | + |
|
Preference number: 1 (lower is better) Translates to: STLSCLQCPHPWPSE*RGRHRSPTCTWCPL Trigger: CAGAGGACACCACGTACAAGTGGGACTCCTGTGCCGCCCACGCCATTCTGAGGGCCATGGGTGGGGGCATTGTAGACATGAAAGAGTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR CCA 90 bp | TCTTTCATGTCTACAATGCCCCCACCCATGGCCCTCAGAATGGCGTaGGCGGCACAGGAGTCCCACTTGTACGTGGTGTCCTCTGAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: SFMSTMPPPMALRMA*AAQESHLYVVSSEK Trigger: CTTCTCAGAGGACACCACGTACAAGTGGGACTCCTGTGCCGCCCACGCCATTCTGAGGGCCATGGGTGGGGGCATTGTAGACATGAAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR TCA 90 bp | TGGGCCATGTTGGCACACACATTTAATCCCAGTACTCAGGATCTCTaGGATCGAGGCCAGCCTGGTGTGCAGAGCAGGTTCCAGGACAGT | + |
|
Preference number: 1 (lower is better) Translates to: WAMLAHTFNPSTQDL*DRGQPGVQSRFQDS Trigger: ACTGTCCTGGAACCTGCTCTGCACACCAGGCTGGCCTCGATCTCAGAGATCCTGAGTACTGGGATTAAATGTGTGTGCCAACATGGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR TCA 90 bp | AATGGCGTGGGCGGCACAGGAGTCCCACTTGTACGTGGTGTCCTCTaGGAAGATGTAAATGTCAGCCAAGCCCTGGATTACACAGAGGCT | + |
|
Preference number: 1 (lower is better) Translates to: NGVGGTGVPLVRGVL*EDVNVSQALDYTEA Trigger: AGCCTCTGTGTAATCCAGGGCTTGGCTGACATTTACATCTTCTCAGAGGACACCACGTACAAGTGGGACTCCTGTGCCGCCCACGCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR CCA 90 bp | GATCTGATGGCCAATAGCTGGGCAGGAAGTGGAGGGGAGATCTTTTaGGCAGAGAGAGGGATGCTGGGAGAAGATTCAGAGGCAGGAGAT | + |
|
Preference number: 1 (lower is better) Translates to: DLMANSWAGSGGEIF*AERGMLGEDSEAGD Trigger: ATCTCCTGCCTCTGAATCTTCTCCCAGCATCCCTCTCTCTGCCCAAAAGATCTCCCCTCCACTTCCTGCCCAGCTATTGGCCATCAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR CCA 90 bp | TGTCCAGCCGATTCCTGGACCTGTAAGCTATCAGCCCTCCCTTGTTaGCCCAGAGTTCCACCCCAGAAGCACCTTTATTTTCCACATGAT | + |
|
Preference number: 1 (lower is better) Translates to: CPADSWTCKLSALPC*PRVPPQKHLYFPHD Trigger: ATCATGTGGAAAATAAAGGTGCTTCTGGGGTGGAACTCTGGGCCAACAAGGGAGGGCTGATAGCTTACAGGTCCAGGAATCGGCTGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR TCA 90 bp | AGAGGGATGCTGGGAGAAGATTCAGAGGCAGGAGATTCAGCCAGATaGGCTGAACATTGGATCAGAGAGCAGAACAGACAGGTAGAGATG | + |
|
Preference number: 1 (lower is better) Translates to: RGMLGEDSEAGDSAR*AEHWIREQNRQVEM Trigger: CATCTCTACCTGTCTGTTCTGCTCTCTGATCCAATGTTCAGCTCATCTGGCTGAATCTCCTGCCTCTGAATCTTCTCCCAGCATCCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR TCA 90 bp | CTGACTCATGTGAAAGAAGCAGCTGTTCCATGCTTATCACAGGAGTaGGTACAGCAGCCAGGACTATGGCATCACCTAAGTGCCCATTGG | + |
|
Preference number: 1 (lower is better) Translates to: LTHVKEAAVPCLSQE*VQQPGLWHHLSAHW Trigger: CCAATGGGCACTTAGGTGATGCCATAGTCCTGGCTGCTGTACTCACTCCTGTGATAAGCATGGAACAGCTGCTTCTTTCACATGAGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR CCA 90 bp | GGCAGAGAGCTAAAGCCTGGCAGGATCTTAGCATTGTTATTTCTATaGCCCATCATGGGTCCCATAGTTTGTAAATATTCACTCTTCCTC | + |
|
Preference number: 1 (lower is better) Translates to: GRELKPGRILALLFL*PIMGPIVCKYSLFL Trigger: GAGGAAGAGTGAATATTTACAAACTATGGGACCCATGATGGGCCATAGAAATAACAATGCTAAGATCCTGCCAGGCTTTAGCTCTCTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR TCA 90 bp | TTGGTTGGATTTAACATTGGCAGAACCTTTAATATACTGATAGGTTaGATCAATGGGATCCACCCAAATCCCAAGACTCTCGTGAGGGAT | + |
|
Preference number: 1 (lower is better) Translates to: LVGFNIGRTFNILIG*INGIHPNPKTLVRD Trigger: ATCCCTCACGAGAGTCTTGGGATTTGGGTGGATCCCATTGATTCAACCTATCAGTATATTAAAGGTTCTGCCAATGTTAAATCCAACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR GCA 90 bp | AAACATACAGGGAGCTCTTTGTTACACCCCCTTCTGCTTTACCTATaGTTTTCCATCTGTCACCTGCCTATGTATGTATGTATGTATGTA | + |
|
Preference number: 1 (lower is better) Translates to: KHTGSSLLHPLLLYL*FSICHLPMYVCMYV Trigger: TACATACATACATACATACATAGGCAGGTGACAGATGGAAAAGCATAGGTAAAGCAGAAGGGGGTGTAACAAAGAGCTCCCTGTATGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR CCA 90 bp | ATCTTCAAATCAACCTTTAAAATTAGTAACAGAGCTGGGCCATGTTaGCACACACATTTAATCCCAGTACTCAGGATCTCTGAGATCGAG | + |
|
Preference number: 1 (lower is better) Translates to: IFKSTFKISNRAGPC*HTHLIPVLRISEIE Trigger: CTCGATCTCAGAGATCCTGAGTACTGGGATTAAATGTGTGTGCCAACATGGCCCAGCTCTGTTACTAATTTTAAAGGTTGATTTGAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR-3UTR TCA 90 bp | GGCCCGAGGTTTTGGATGAGGCGGCTCAGGAAGGTGTCCAGCCGATTCCTGGACGTACGTGGTGTCCTCTaGGAAGATGTAAATGTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: GPRFWMRRLRKVSSRFLDVRGVL*EDVNVS Trigger: GCTGACATTTACATCTTCTCAGAGGACACCACGTAC...GTCCAGGAATCGGCTGGACACCTTCCTGAGCCGCCTCATCCAAAACCTCGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCTCAGGAAGGTGTCCAGCCGATTCCTGGACCTGTAAGCTATCAGCCCTCCCTGCAGGGAATGGATGTTaGTCCCCATGTACGAAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: GSGRCPADSWTCKLSALPAGNGC*SPCTKG Trigger: GCCTTTCGTACATGGGGACCAACATCCATTCCCTGC...AGGGAGGGCTGATAGCTTACAGGTCCAGGAATCGGCTGGACACCTTCCTGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGGAAGGTGTCCAGCCGATTCCTGGACCTGTAAGCTATCAGCCCTCCCTTGTGCGAGCTGCAGGGAATaGATGTTGGTCCCCATGTAC | + |
|
Preference number: 2 (lower is better) Translates to: SGRCPADSWTCKLSALPCASCRE*MLVPMY Trigger: GTACATGGGGACCAACATCCATTCCCTGCAGCTCGC...ACAAGGGAGGGCTGATAGCTTACAGGTCCAGGAATCGGCTGGACACCTTCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCAGCCCTCCCTTGTTGGCCCAGAGTTCCACCCCAGAAGCACCTTTATTTTCCATCCCAAGACTCTCGTaGGGGATGCTGATGTCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: ISPPLLAQSSTPEAPLFSIPRLS*GMLMSR Trigger: CCTGGACATCAGCATCCCTCACGAGAGTCTTGGGAT...GGAAAATAAAGGTGCTTCTGGGGTGGAACTCTGGGCCAACAAGGGAGGGCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTTTCCACATGATACAGCAGCTGTGGCAAATCCAACCCCGTGTCTGGACTTCTCAATGCCCCCACCCATaGCCCTCAGAATGGCGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: IFHMIQQLWQIQPRVWTSQCPHP*PSEWRG Trigger: CCCACGCCATTCTGAGGGCCATGGGTGGGGGCATTG...AGAAGTCCAGACACGGGGTTGGATTTGCCACAGCTGCTGTATCATGTGGAAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTAAATGTCAGCCAAGCCCTGGATTACACAGAGGCTCTTGTAGCCAGCCCCTGTGGGACGCAAAAGGCTaGTTGATGACTCCCATTAGG | + |
|
Preference number: 2 (lower is better) Translates to: CKCQPSPGLHRGSCSQPLWDAKG*LMTPIR Trigger: CCTAATGGGAGTCATCAATCAGCCTTTTGCGTCCCA...CAGGGGCTGGCTACAAGAGCCTCTGTGTAATCCAGGGCTTGGCTGACATTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGCGGCACAGGAGTCCCACTTGTACGTGGTGTCCTCTGAGAAGATGTAAATGTTTAGAGATGGCGAGCTaGAGGGAATGGATGTTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: GRHRSPTCTWCPLRRCKCLEMAS*REWMLV Trigger: GACCAACATCCATTCCCTGCAGCTCGCCATCTCTAA...ACATTTACATCTTCTCAGAGGACACCACGTACAAGTGGGACTCCTGTGCCGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCTCAGGAAGGTGTCCAGCCGATTCCTGGACCTGTAAGCTATCAGCCCTCCCTAATATACTGATAGGTTaGATCAATGGGATCCACCCA | + |
|
Preference number: 2 (lower is better) Translates to: GSGRCPADSWTCKLSALPNILIG*INGIHP Trigger: TGGGTGGATCCCATTGATTCAACCTATCAGTATATT...AGGGAGGGCTGATAGCTTACAGGTCCAGGAATCGGCTGGACACCTTCCTGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCAGCTGTGGCAAATCCAACCCCGTGTCTGGACTTCTCTCTAAGCACTCTTGCTGGTACTGATGACTaGAGAAAAGGGGCTGGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TAAVANPTPCLDFSLSTLAGTDD*RKGAGE Trigger: TTCTCCAGCCCCTTTTCTGCAGTCATCAGTACCAGC...AAGAGTGCTTAGAGAGAAGTCCAGACACGGGGTTGGATTTGCCACAGCTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCCCAGACTTCCTGCAAACGACTTTAGAAAGCAACCACCCCAGAGACTCAAGTAGAGCACAGCACATGTaGTCTATGCACAGCTCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: APDFLQTTLESNHPRDSSRAQHM*SMHSSK Trigger: CTTAGAGCTGTGCATAGACCACATGTGCTGTGCTCT...ACTTGAGTCTCTGGGGTGGTTGCTTTCTAAAGTCGTTTGCAGGAAGTCTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCCCAGACTTCCTGCAAACGACTTTAGAAAGCAACCACCCCAGAGACTCAAGTAGAGCTGGGCCATGTTaGCACACACATTTAATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: APDFLQTTLESNHPRDSSRAGPC*HTHLIP Trigger: TGGGATTAAATGTGTGTGCCAACATGGCCCAGCTCT...ACTTGAGTCTCTGGGGTGGTTGCTTTCTAAAGTCGTTTGCAGGAAGTCTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGGGAATGGATGTTGGTCCCCATGTACGAAAGGCCCCAGTAGCACTGTCCCTTCTGGGGAAAATTCCTTaGTTGGATTTAACATTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: QGMDVGPHVRKAPVALSLLGKIP*LDLTLA Trigger: TGCCAATGTTAAATCCAACCAAGGAATTTTCCCCAG...AAGGGACAGTGCTACTGGGGCCTTTCGTACATGGGGACCAACATCCATTCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGCGGCACAGGAGTCCCACTTGTACGTGGTGTCCTCTGAGAAGATGTAAATGTACACGCCAATTAAAATaGTTACACACTGAAGTCCGC | + |
|
Preference number: 2 (lower is better) Translates to: GRHRSPTCTWCPLRRCKCTRQLK*LHTEVR Trigger: GCGGACTTCAGTGTGTAACCATTTTAATTGGCGTGT...ACATTTACATCTTCTCAGAGGACACCACGTACAAGTGGGACTCCTGTGCCGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCCCAGACTTCCTGCAAACGACTTTAGAAAGCAACCACCCCAGAGACTCAAGTCCACCTATTATTACATaGTCTGTCTTCTCTTTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: APDFLQTTLESNHPRDSSPPIIT*SVFSFS Trigger: GGAGAAAGAGAAGACAGAGCATGTAATAATAGGTGG...ACTTGAGTCTCTGGGGTGGTTGCTTTCTAAAGTCGTTTGCAGGAAGTCTGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR-3UTR TCA 90 bp | GCCCCAGACTTCCTGCAAACGACTTTAGAAAGCAACCACCCCAGAGACTCAAGTAAGGTGAGTTGTATCTaGCTGGTTGTAATAAAGATC | + |
|
Preference number: 2 (lower is better) Translates to: APDFLQTTLESNHPRDSSKVSCI*LVVIKI Trigger: GATCTTTATTACAACCAGTCAGATACAACTCACCTT...ACTTGAGTCTCTGGGGTGGTTGCTTTCTAAAGTCGTTTGCAGGAAGTCTGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR-3UTR GCA 90 bp | AGAATGTTTGCATATAACCTACTTAACTTTCTCCTGTATGCACCAGAATTCAGAGAGGCCAGCCTGGTGTaGAGAGCAGGTTCCAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: RMFAYNLLNFLLYAPEFREASLV*RAGSRT Trigger: TGTCCTGGAACCTGCTCTGCACACCAGGCTGGCCTC...TCTGAATTCTGGTGCATACAGGAGAAAGTTAAGTAGGTTATATGCAAACATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTATGCTTTTCCATCTGTCACCTGCCTATGTATGTATGTATGTATGTATGTATCTCAGGCTAACCCCATaGATACCCAAGCTGCCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: PMLFHLSPAYVCMYVCMYLRLTP*IPKLPG Trigger: TCCAGGCAGCTTGGGTATCCATGGGGTTAGCCTGAG...ATACATACATACATACATACATACATAGGCAGGTGACAGATGGAAAAGCATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGAAAGGTACAGATAAAGGGCTGGTTATATCTAAAATGTATCGTCTCTCGCTTCCCACCCTGCTTCAGTaGGTAGAAACCCTCAGTTAT | + |
|
Preference number: 2 (lower is better) Translates to: MKGTDKGLVISKMYRLSLPTLLQ*VETLSY Trigger: ATAACTGAGGGTTTCTACTCACTGAAGCAGGGTGGG...AAGCGAGAGACGATACATTTTAGATATAACCAGCCCTTTATCTGTACCTTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR-3UTR TCA 90 bp | AGAATGTTTGCATATAACCTACTTAACTTTCTCCTGTATGCACCAGAATTCAGAAACAATCCCTCCAGTTaGCACTCCCTGGGTTACCTG | + |
|
Preference number: 2 (lower is better) Translates to: RMFAYNLLNFLLYAPEFRNNPSS*HSLGYL Trigger: CAGGTAACCCAGGGAGTGTCAACTGGAGGGATTGTT...TCTGAATTCTGGTGCATACAGGAGAAAGTTAAGTAGGTTATATGCAAACATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGGAGCTCTTTGTTACACCCCCTTCTGCTTTACCTATGCTTTTCCATCTGTCACTATCTACTATCACCTaGCTGTATATGTATGTATGT | + |
|
Preference number: 2 (lower is better) Translates to: RELFVTPPSALPMLFHLSLSTIT*LYMYVC Trigger: ACATACATACATATACAGGCAGGTGATAGTAGATAG...TGACAGATGGAAAAGCATAGGTAAAGCAGAAGGGGGTGTAACAAAGAGCTCCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR-3UTR GCA 90 bp | AGAATGTTTGCATATAACCTACTTAACTTTCTCCTGTATGCACCAGAATTCAGAGAGCTAGATTCTCACTaGTCTAGAGAACTCAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RMFAYNLLNFLLYAPEFRELDSH*SRELRR Trigger: CCTCCTGAGTTCTCTAGAGCAGTGAGAATCTAGCTC...TCTGAATTCTGGTGCATACAGGAGAAAGTTAAGTAGGTTATATGCAAACATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR-3UTR GCA 90 bp | AGAGATGAAATAAATATGGTTGACTTATTACCAGTAATCGGTGACCGTGAGGATCTTCTGCTTTACCTATaGTTTTCCATCTGTCACCTG | + |
|
Preference number: 2 (lower is better) Translates to: RDEINMVDLLPVIGDREDLLLYL*FSICHL Trigger: CAGGTGACAGATGGAAAAGCATAGGTAAAGCAGAAG...ATCCTCACGGTCACCGATTACTGGTAATAAGTCAACCATATTTATTTCATCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR CAA 90 bp | AAAGCAACCACCCCAGAGACTCAAGTTCTCACAAGCTCAAGTTCCTaGTATAAAATGACAGAATGTTTGCATATAACCTACTTAACTTTC | + |
|
Preference number: 2 (lower is better) Translates to: KATTPETQVLTSSSS*YKMTECLHITYLTF Trigger: GAAAGTTAAGTAGGTTATATGCAAACATTCTGTCATTTTATACAAGGAACTTGAGCTTGTGAGAACTTGAGTCTCTGGGGTGGTTGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTATGTATGTTCTACCAACTATCACCGGTCTATGTCTTTCTCTTTCTTTCTTTCTCAAAACAGGAAGGTaGATTTTAACCAGTGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: CMYVLPTITGLCLSLSFFLKTGR*ILTSGT Trigger: TGTCCCACTGGTTAAAATTCACCTTCCTGTTTTGAG...AAAGAAAGAAAGAGAAAGACATAGACCGGTGATAGTTGGTAGAACATACATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAATGTTTGCATATAACCTACTTAACTTTCTCCTGTATGCACCAGAATTCAGATCATGCCAGTGCATATaGGAGCAAGTTCTTAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: RMFAYNLLNFLLYAPEFRSCQCI*EQVLKF Trigger: GAACTTAAGAACTTGCTCCCATATGCACTGGCATGA...TCTGAATTCTGGTGCATACAGGAGAAAGTTAAGTAGGTTATATGCAAACATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAGTTTTGCTCCTCCCTTGGTATTTTATTGAAGGGTTCCAAGCAACAATAACAGTGAATTTTAACCAGTaGGACAAAACTATCTTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: TVLLLPWYFIEGFQATITVNFNQ*DKTIFK Trigger: CTTGAAGATAGTTTTGTCCCACTGGTTAAAATTCAC...TGTTATTGTTGCTTGGAACCCTTCAATAAAATACCAAGGGAGGAGCAAAACTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR CCA 72 bp | TCATGTCTACAATGCCCCCACCCATGGCCCTCAGAATaGCGTGGGCGGCACAGGAGTCCCACTTGTACGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SCLQCPHPWPSE*RGRHRSPTCTW Trigger: CCACGTACAAGTGGGACTCCTGTGCCGCCCACGCCATTCTGAGGGCCATGGGTGGGGGCATTGTAGACATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR CCA 72 bp | CTAAGCACTCTTTCATGTCTACAATGCCCCCACCCATaGCCCTCAGAATGGCGTGGGCGGCACAGGAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LSTLSCLQCPHP*PSEWRGRHRSP Trigger: GGGACTCCTGTGCCGCCCACGCCATTCTGAGGGCCATGGGTGGGGGCATTGTAGACATGAAAGAGTGCTTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR TCA 72 bp | GAATCAATGGGATCCACCCAAATCCCAAGACTCTCGTaGGGGATGCTGATGTCCAGGGACTCCAGCGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ESMGSTQIPRLS*GMLMSRDSSVG Trigger: TCCCACGCTGGAGTCCCTGGACATCAGCATCCCTCACGAGAGTCTTGGGATTTGGGTGGATCCCATTGATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR CCA 72 bp | TCCCAGTACTCAGGATCTCTGAGATCGAGGCCAGCCTaGTGTGCAGAGCAGGTTCCAGGACAGTCAAAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SQYSGSLRSRPA*CAEQVPGQSKL Trigger: TAGCTTTGACTGTCCTGGAACCTGCTCTGCACACCAGGCTGGCCTCGATCTCAGAGATCCTGAGTACTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR TCA 72 bp | GGCGGCACAGGAGTCCCACTTGTACGTGGTGTCCTCTaGGAAGATGTAAATGTCAGCCAAGCCCTGGATTAC | + |
|
Preference number: 3 (lower is better) Translates to: GGTGVPLVRGVL*EDVNVSQALDY Trigger: GTAATCCAGGGCTTGGCTGACATTTACATCTTCTCAGAGGACACCACGTACAAGTGGGACTCCTGTGCCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR TCA 72 bp | TTGGCACACACATTTAATCCCAGTACTCAGGATCTCTaGGATCGAGGCCAGCCTGGTGTGCAGAGCAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LAHTFNPSTQDL*DRGQPGVQSRF Trigger: GAACCTGCTCTGCACACCAGGCTGGCCTCGATCTCAGAGATCCTGAGTACTGGGATTAAATGTGTGTGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCAGCTGTGGCAAATCCAACCCCGTGTCTGGACTTCTCTCTAAGCACTCTTCGCGAAAGAGCAGCTTaGATGGTGTCTTTTTCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TAAVANPTPCLDFSLSTLRERAA*MVSFSL Trigger: CAGCGAAAAAGACACCATCAAAGCTGCTCTTTCGCG...AAGAGTGCTTAGAGAGAAGTCCAGACACGGGGTTGGATTTGCCACAGCTGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR CCA 72 bp | GATTCCTGGACCTGTAAGCTATCAGCCCTCCCTTGTTaGCCCAGAGTTCCACCCCAGAAGCACCTTTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: DSWTCKLSALPC*PRVPPQKHLYF Trigger: AAAATAAAGGTGCTTCTGGGGTGGAACTCTGGGCCAACAAGGGAGGGCTGATAGCTTACAGGTCCAGGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR GCA 72 bp | GTGAGTACAGCAGCCAGGACTATGGCATCACCTAAGTaGCCATTGGTGTATGTTACTGGTCCTACAAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: VSTAARTMASPK*PLVYVTGPTRM Trigger: CATCCTTGTAGGACCAGTAACATACACCAATGGGCACTTAGGTGATGCCATAGTCCTGGCTGCTGTACTCAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR CCA 72 bp | CTGACTGGTTGTAATAAAGATCTGATGGCCAATAGCTaGGCAGGAAGTGGAGGGGAGATCTTTTGGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LTGCNKDLMANS*AGSGGEIFWAE Trigger: CTCTGCCCAAAAGATCTCCCCTCCACTTCCTGCCCAGCTATTGGCCATCAGATCTTTATTACAACCAGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR TCA 72 bp | GTGAAAGAAGCAGCTGTTCCATGCTTATCACAGGAGTaGGTACAGCAGCCAGGACTATGGCATCACCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: VKEAAVPCLSQE*VQQPGLWHHLS Trigger: ACTTAGGTGATGCCATAGTCCTGGCTGCTGTACTCACTCCTGTGATAAGCATGGAACAGCTGCTTCTTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR GCA 72 bp | GCTGTCCAGAAAGGACAACGAATGCAGGAAGTCAACTaGCAAGCTCTACCAAGACAGAGTAAGCAAGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: AVQKGQRMQEVN*QALPRQSKQVL Trigger: AAGGACTTGCTTACTCTGTCTTGGTAGAGCTTGGCAGTTGACTTCCTGCATTCGTTGTCCTTTCTGGACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR TCA 72 bp | GTGGTGACTATAGCTAACAGTGGGGCATGTACTGCATaGATCCTAGCAATGGCTTGTAAATGTCCTCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: VVTIANSGACTA*ILAMACKCPHH Trigger: GTGGTGAGGACATTTACAAGCCATTGCTAGGATTCATGCAGTACATGCCCCACTGTTAGCTATAGTCACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR TCA 72 bp | AGAAGATTCAGAGGCAGGAGATTCAGCCAGATGAGCTaGACATTGGATCAGAGAGCAGAACAGACAGGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: RRFRGRRFSQMS*TLDQRAEQTGR Trigger: TCTACCTGTCTGTTCTGCTCTCTGATCCAATGTTCAGCTCATCTGGCTGAATCTCCTGCCTCTGAATCTTCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR GCA 72 bp | GGGAGCTCTTTGTTACACCCCCTTCTGCTTTACCTATaGTTTTCCATCTGTCACCTGCCTATGTATGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: GSSLLHPLLLYL*FSICHLPMYVC Trigger: ACATACATACATAGGCAGGTGACAGATGGAAAAGCATAGGTAAAGCAGAAGGGGGTGTAACAAAGAGCTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR TCA 72 bp | CTAGAGAACTCAGGAGGGAGAAAGGGTAACACTGTGTaGAGGAGTGTCTCTGCAGTGTCAATTGTTAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: LENSGGRKGNTV*RSVSAVSIVNS Trigger: AGAATTAACAATTGACACTGCAGAGACACTCCTTCACACAGTGTTACCCTTTCTCCCTCCTGAGTTCTCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGGAGCTCTTTGTTACACCCCCTTCTGCTTTACCTATGCTTTTCCATCTGTCATTGAACTGTACAGTTTaGCTCCTCCCTTGGTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: RELFVTPPSALPMLFHLSLNCTV*LLPWYF Trigger: AAAATACCAAGGGAGGAGCAAAACTGTACAGTTCAA...TGACAGATGGAAAAGCATAGGTAAAGCAGAAGGGGGTGTAACAAAGAGCTCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTATCTGCAGACAGAATGCTGTCCAGAAAGGACAACGAATGCAGGAAGTCAACAGAAATACACAACTaGCAAGACTTCAGTCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TLSADRMLSRKDNECRKSTEIHN*QDFSPR Trigger: TCTGGGACTGAAGTCTTGCAAGTTGTGTATTTCTGT...TGACTTCCTGCATTCGTTGTCCTTTCTGGACAGCATTCTGTCTGCAGATAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR TCA 72 bp | TGGATCCAAACAGCTGGGTCATTTAGTCATTCCACTTaGACTGTACAGTTTTGCTCCTCCCTTGGTATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: WIQTAGSFSHST*TVQFCSSLGIL Trigger: TAAAATACCAAGGGAGGAGCAAAACTGTACAGTTCAAGTGGAATGACTAAATGACCCAGCTGTTTGGATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR TCA 72 bp | AAGTGCCTATGTCATTATTTAAATCACTGGCACGTCTaGGAAAAGTCCCCATATAGGAGGGAGTTAGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: KCLCHYLNHWHV*EKSPYRRELAR Trigger: TCTTGCTAACTCCCTCCTATATGGGGACTTTTCTCAGACGTGCCAGTGATTTAAATAATGACATAGGCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR TCA 72 bp | CATAAAAGGTCTGTAAAACATTCTGGGTCAGAAGGCTaGAGAGAGATGCTCCAACACTATAGAGAATACTGG | + |
|
Preference number: 3 (lower is better) Translates to: HKRSVKHSGSEG*REMLQHYREYW Trigger: CCAGTATTCTCTATAGTGTTGGAGCATCTCTCTTCAGCCTTCTGACCCAGAATGTTTTACAGACCTTTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR CCA 72 bp | TCAACCTTTAAAATTAGTAACAGAGCTGGGCCATGTTaGCACACACATTTAATCCCAGTACTCAGGATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: STFKISNRAGPC*HTHLIPVLRIS Trigger: AGAGATCCTGAGTACTGGGATTAAATGTGTGTGCCAACATGGCCCAGCTCTGTTACTAATTTTAAAGGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR TCA 72 bp | GAACTGTACAGTTTTGCTCCTCCCTTGGTATTTTATTaGAGGGTTCCAAGCAACAATAACAGCACAATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ELYSFAPPLVFY*RVPSNNNSTMF Trigger: GAACATTGTGCTGTTATTGTTGCTTGGAACCCTTCAATAAAATACCAAGGGAGGAGCAAAACTGTACAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR GCA 72 bp | CCCTTCTGCTTTACCTATGCTTTTCCATCTGTCACCTaGCTATGTATGTATGTATGTATGTATGTATGCATG | + |
|
Preference number: 3 (lower is better) Translates to: PFCFTYAFPSVT*LCMYVCMYVCM Trigger: CATGCATACATACATACATACATACATACATAGGCAGGTGACAGATGGAAAAGCATAGGTAAAGCAGAAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR CCA 72 bp | CTAAAGCCTGGCAGGATCTTAGCATTGTTATTTCTATaGCCCATCATGGGTCCCATAGTTTGTAAATATTCA | + |
|
Preference number: 3 (lower is better) Translates to: LKPGRILALLFL*PIMGPIVCKYS Trigger: TGAATATTTACAAACTATGGGACCCATGATGGGCCATAGAAATAACAATGCTAAGATCCTGCCAGGCTTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR TCA 72 bp | TTTAACATTGGCAGAACCTTTAATATACTGATAGGTTaGATCAATGGGATCCACCCAAATCCCAAGACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: FNIGRTFNILIG*INGIHPNPKTL Trigger: GAGAGTCTTGGGATTTGGGTGGATCCCATTGATTCAACCTATCAGTATATTAAAGGTTCTGCCAATGTTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| 3UTR CCA 72 bp | TCATTCCACTTGAACTGTACAGTTTTGCTCCTCCCTTaGTATTTTATTGAAGGGTTCCAAGCAACAATAACA | + |
|
Preference number: 3 (lower is better) Translates to: SFHLNCTVLLLP*YFIEGFQATIT Trigger: TGTTATTGTTGCTTGGAACCCTTCAATAAAATACCAAGGGAGGAGCAAAACTGTACAGTTCAAGTGGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTATGCTTTTCCATCTGTCACCTGCCTATGTATGTATGTATGTATGTATGTATTCCCTTGGTATTTTATaGAAGGGTTCCAAGCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: PMLFHLSPAYVCMYVCMYSLGIL*KGSKQQ Trigger: TTGTTGCTTGGAACCCTTCAATAAAATACCAAGGGA...ATACATACATACATACATACATACATAGGCAGGTGACAGATGGAAAAGCATAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR GCA 90 bp | GGGCGGCACAGGAGTCCCACTTGTACGTGGTGTCCTCTGAGAAGATGTAAATGTTGGAAGAGGGTCTCCTaGTGCCTGCACGCCCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GRHRSPTCTWCPLRRCKCWKRVS*CLHALA Trigger: CGCCAGGGCGTGCAGGCAGCAGGAGACCCTCTTCCA...ACATTTACATCTTCTCAGAGGACACCACGTACAAGTGGGACTCCTGTGCCGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGGAATGGATGTTGGTCCCCATGTACGAAAGGCCCCAGTAGCACTGTCCCTTCCTCCTCCGTGGACTaGAGCTCCACTGTGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGNGCWSPCTKGPSSTVPSSSVD*SSTVIF Trigger: AAAGATCACAGTGGAGCTGCAGTCCACGGAGGAGGA...AGGGACAGTGCTACTGGGGCCTTTCGTACATGGGGACCAACATCCATTCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGACTTCCTGCAAACGACTTTAGAAAGCAACCACCCCAGAGACTCAAGTACAGGCCCGAGGTTTTaGATGAGGCGGCTCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: APDFLQTTLESNHPRDSSTGPRF*MRRLRK Trigger: CTTCCTGAGCCGCCTCATCCAAAACCTCGGGCCTGT...ACTTGAGTCTCTGGGGTGGTTGCTTTCTAAAGTCGTTTGCAGGAAGTCTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCTAAGCACTCTTTCATGTCTACAATGCCCCCACCCATGGCCCTCAGAACTTGCTGAGAAGCTCTaGCGTCTCCTCCTCCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSLSTLSCLQCPHPWPSELAEKL*RLLLRG Trigger: TCCACGGAGGAGGAGACGGCAGAGCTTCTCAGCAAG...TTCTGAGGGCCATGGGTGGGGGCATTGTAGACATGAAAGAGTGCTTAGAGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| CDS-3UTR CCA 90 bp | ATCAATGGGATCCACCCAAATCCCAAGACTCTCGTGAGGGATGCTGATGTCCAGTCCTCAATGAGCAGCTaGAAGAGGGTCTCCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: INGIHPNPKTLVRDADVQSSMSS*KRVSCC Trigger: GCAGCAGGAGACCCTCTTCCAGCTGCTCATTGAGGA...CTGGACATCAGCATCCCTCACGAGAGTCTTGGGATTTGGGTGGATCCCATTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTATCTGCAGACAGAATGCTGTCCAGAAAGGACAACGAATGCAGGAAGTCACAATGCCCCCACCCATaGCCCTCAGAATGGCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLSADRMLSRKDNECRKSQCPHP*PSEWRG Trigger: CCCACGCCATTCTGAGGGCCATGGGTGGGGGCATTG...TGACTTCCTGCATTCGTTGTCCTTTCTGGACAGCATTCTGTCTGCAGATAAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR TCA 90 bp | GCCCCAGACTTCCTGCAAACGACTTTAGAAAGCAACCACCCCAGAGACTCAAGTCTTTCTTCTCCTCAATaGGCAGCTGGAAGAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: APDFLQTTLESNHPRDSSLSSPQ*AAGRGS Trigger: AGACCCTCTTCCAGCTGCTCATTGAGGAGAAGAAAG...ACTTGAGTCTCTGGGGTGGTTGCTTTCTAAAGTCGTTTGCAGGAAGTCTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR GCA 90 bp | GTATGTATGTATGTTCTACCAACTATCACCGGTCTATGTCTTTCTCTTTCTTTCTGGAAGAGGGTCTCCTaGTGCCTGCACGCCCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VCMYVLPTITGLCLSLSFWKRVS*CLHALA Trigger: CGCCAGGGCGTGCAGGCAGCAGGAGACCCTCTTCCA...GAAAGAAAGAGAAAGACATAGACCGGTGATAGTTGGTAGAACATACATACATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR GCA 90 bp | ACTTTATCTGCAGACAGAATGCTGTCCAGAAAGGACAACGAATGCAGGAAGTCATCCTCCTCCGTGGACTaGAGCTCCACTGTGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLSADRMLSRKDNECRKSSSSVD*SSTVIF Trigger: AAAGATCACAGTGGAGCTGCAGTCCACGGAGGAGGA...TGACTTCCTGCATTCGTTGTCCTTTCTGGACAGCATTCTGTCTGCAGATAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR CCA 90 bp | CCTATGCTTTTCCATCTGTCACCTGCCTATGTATGTATGTATGTATGTATGTATCCATGGCCCTCAGAATaGCGTGGGCGGCACAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PMLFHLSPAYVCMYVCMYPWPSE*RGRHRS Trigger: ACTCCTGTGCCGCCCACGCCATTCTGAGGGCCATGG...ATACATACATACATACATACATACATAGGCAGGTGACAGATGGAAAAGCATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR TCA 90 bp | ATGAAAGGTACAGATAAAGGGCTGGTTATATCTAAAATGTATCGTCTCTCGCTTTCTCGTGAGGGATGCTaGTGTCCAGGGACTCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: MKGTDKGLVISKMYRLSLSREGC*CPGTPA Trigger: CGCTGGAGTCCCTGGACATCAGCATCCCTCACGAGA...AAGCGAGAGACGATACATTTTAGATATAACCAGCCCTTTATCTGTACCTTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGCTGTGGCAAATCCAACCCCGTGTCTGGACTTCTCTCTAAGCACTCTTCAGGGTCTTGAAATCTaGAGCAAACTTCTTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TAAVANPTPCLDFSLSTLQGLEI*SKLLVL Trigger: AAGAACAAGAAGTTTGCTGCAGATTTCAAGACCCTG...AAGAGTGCTTAGAGAGAAGTCCAGACACGGGGTTGGATTTGCCACAGCTGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| CDS-3UTR CCA 90 bp | CCTATGCTTTTCCATCTGTCACCTGCCTATGTATGTATGTATGTATGTATGTATTCAGCCCTCCCTTGTTaGCCCAGAGTTCCACCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PMLFHLSPAYVCMYVCMYSALPC*PRVPPQ Trigger: CTGGGGTGGAACTCTGGGCCAACAAGGGAGGGCTGA...ATACATACATACATACATACATACATAGGCAGGTGACAGATGGAAAAGCATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR GCA 90 bp | GTATGTATGTATGTTCTACCAACTATCACCGGTCTATGTCTTTCTCTTTCTTTCCTTGCTGAGAAGCTCTaGCGTCTCCTCCTCCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VCMYVLPTITGLCLSLSFLAEKL*RLLLRG Trigger: TCCACGGAGGAGGAGACGGCAGAGCTTCTCAGCAAG...GAAAGAAAGAGAAAGACATAGACCGGTGATAGTTGGTAGAACATACATACATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR TCA 90 bp | AACATGCAATTTCTTCATGCCAGTGCATATGGGAGCAAGTTCTTAAGTTCTAATATCCCAAGACTCTCGTaGGGGATGCTGATGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NMQFLHASAYGSKFLSSNIPRLS*GMLMSR Trigger: CCTGGACATCAGCATCCCTCACGAGAGTCTTGGGAT...ATTAGAACTTAAGAACTTGCTCCCATATGCACTGGCATGAAGAAATTGCATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR CCA 90 bp | AGAGATGAAATAAATATGGTTGACTTATTACCAGTAATCGGTGACCGTGAGGATTCCTCAATGAGCAGCTaGAAGAGGGTCTCCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RDEINMVDLLPVIGDREDSSMSS*KRVSCC Trigger: GCAGCAGGAGACCCTCTTCCAGCTGCTCATTGAGGA...ATCCTCACGGTCACCGATTACTGGTAATAAGTCAACCATATTTATTTCATCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR CCA 90 bp | ATGAAAGGTACAGATAAAGGGCTGGTTATATCTAAAATGTATCGTCTCTCGCTTGCGAGCTGCAGGGAATaGATGTTGGTCCCCATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MKGTDKGLVISKMYRLSLASCRE*MLVPMY Trigger: GTACATGGGGACCAACATCCATTCCCTGCAGCTCGC...AAGCGAGAGACGATACATTTTAGATATAACCAGCCCTTTATCTGTACCTTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR CCA 90 bp | AACTGTACAGTTTTGCTCCTCCCTTGGTATTTTATTGAAGGGTTCCAAGCAACAATGATACAGCAGCTGTaGCAAATCCAACCCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NCTVLLLPWYFIEGFQATMIQQL*QIQPRV Trigger: GACACGGGGTTGGATTTGCCACAGCTGCTGTATCAT...TGTTGCTTGGAACCCTTCAATAAAATACCAAGGGAGGAGCAAAACTGTACAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCTCTTTGTTACACCCCCTTCTGCTTTACCTATGCTTTTCCATCTGTCACAGGGTCTTGAAATCTaGAGCAAACTTCTTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RELFVTPPSALPMLFHLSQGLEI*SKLLVL Trigger: AAGAACAAGAAGTTTGCTGCAGATTTCAAGACCCTG...TGACAGATGGAAAAGCATAGGTAAAGCAGAAGGGGGTGTAACAAAGAGCTCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR CCA 90 bp | CCTATGCTTTTCCATCTGTCACCTGCCTATGTATGTATGTATGTATGTATGTATGCAGGGAATGGATGTTaGTCCCCATGTACGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PMLFHLSPAYVCMYVCMYAGNGC*SPCTKG Trigger: GCCTTTCGTACATGGGGACCAACATCCATTCCCTGC...ATACATACATACATACATACATACATAGGCAGGTGACAGATGGAAAAGCATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR TCA 90 bp | GTATGTATGTATGTTCTACCAACTATCACCGGTCTATGTCTTTCTCTTTCTTTCTGGGACGCAAAAGGCTaGTTGATGACTCCCATTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCMYVLPTITGLCLSLSFWDAKG*LMTPIR Trigger: CCTAATGGGAGTCATCAATCAGCCTTTTGCGTCCCA...GAAAGAAAGAGAAAGACATAGACCGGTGATAGTTGGTAGAACATACATACATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR GCA 90 bp | GTATGTATGTATGTTCTACCAACTATCACCGGTCTATGTCTTTCTCTTTCTTTCTTAGAGATGGCGAGCTaGAGGGAATGGATGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VCMYVLPTITGLCLSLSFLEMAS*REWMLV Trigger: GACCAACATCCATTCCCTGCAGCTCGCCATCTCTAA...GAAAGAAAGAGAAAGACATAGACCGGTGATAGTTGGTAGAACATACATACATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR GCA 90 bp | AGAGATGAAATAAATATGGTTGACTTATTACCAGTAATCGGTGACCGTGAGGATGCTGGTACTGATGACTaGAGAAAAGGGGCTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RDEINMVDLLPVIGDREDAGTDD*RKGAGE Trigger: TTCTCCAGCCCCTTTTCTGCAGTCATCAGTACCAGC...ATCCTCACGGTCACCGATTACTGGTAATAAGTCAACCATATTTATTTCATCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR CCA 90 bp | GTATGTATGTATGTTCTACCAACTATCACCGGTCTATGTCTTTCTCTTTCTTTCATGTCAGCCAAGCCCTaGATTACACAGAGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VCMYVLPTITGLCLSLSFMSAKP*ITQRLL Trigger: CAAGAGCCTCTGTGTAATCCAGGGCTTGGCTGACAT...GAAAGAAAGAGAAAGACATAGACCGGTGATAGTTGGTAGAACATACATACATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR CCA 90 bp | TGTATGTATGTTCTACCAACTATCACCGGTCTATGTCTTTCTCTTTCTTTCTTTTGTCCAGCCGATTCCTaGACCTGTAAGCTATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CMYVLPTITGLCLSLSFFCPADS*TCKLSA Trigger: GGCTGATAGCTTACAGGTCCAGGAATCGGCTGGACA...AAAGAAAGAAAGAGAAAGACATAGACCGGTGATAGTTGGTAGAACATACATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR TCA 90 bp | GGGGAAAATTCCTTGGTTGGATTTAACATTGGCAGAACCTTTAATATACTGATACTTTCTTCTCCTCAATaGGCAGCTGGAAGAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GENSLVGFNIGRTFNILILSSPQ*AAGRGS Trigger: AGACCCTCTTCCAGCTGCTCATTGAGGAGAAGAAAG...TATCAGTATATTAAAGGTTCTGCCAATGTTAAATCCAACCAAGGAATTTTCCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| CDS-3UTR TCA 90 bp | ATGAAAGGTACAGATAAAGGGCTGGTTATATCTAAAATGTATCGTCTCTCGCTTACTGCAGCTCCACTGTaGTCTTTTCCCCCAAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: MKGTDKGLVISKMYRLSLTAAPL*SFPPNH Trigger: ATGATTTGGGGGAAAAGATCACAGTGGAGCTGCAGT...AAGCGAGAGACGATACATTTTAGATATAACCAGCCCTTTATCTGTACCTTTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR TCA 90 bp | GTATGTATGTATGTTCTACCAACTATCACCGGTCTATGTCTTTCTCTTTCTTTCGTACGTGGTGTCCTCTaGGAAGATGTAAATGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VCMYVLPTITGLCLSLSFVRGVL*EDVNVS Trigger: GCTGACATTTACATCTTCTCAGAGGACACCACGTAC...GAAAGAAAGAGAAAGACATAGACCGGTGATAGTTGGTAGAACATACATACATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR TCA 90 bp | AACTGTACAGTTTTGCTCCTCCCTTGGTATTTTATTGAAGGGTTCCAAGCAACACCTTTATTTTCCACATaGTACAGCAGCTGTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NCTVLLLPWYFIEGFQATPLFST*YSSCGK Trigger: TTTGCCACAGCTGCTGTATCATGTGGAAAATAAAGG...TGTTGCTTGGAACCCTTCAATAAAATACCAAGGGAGGAGCAAAACTGTACAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR GCA 90 bp | AGAGATGAAATAAATATGGTTGACTTATTACCAGTAATCGGTGACCGTGAGGATTGTTTTATAACTTCCTaGACCAGCACATCCGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RDEINMVDLLPVIGDREDCFITS*TSTSAR Trigger: CCTGGCGGATGTGCTGGTGCAGGAAGTTATAAAACA...ATCCTCACGGTCACCGATTACTGGTAATAAGTCAACCATATTTATTTCATCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR CCA 90 bp | TGTATGTATGTTCTACCAACTATCACCGGTCTATGTCTTTCTCTTTCTTTCTTTAGTCCCACTTGTACGTaGTGTCCTCTGAGAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: CMYVLPTITGLCLSLSFFSPTCT*CPLRRC Trigger: ACATCTTCTCAGAGGACACCACGTACAAGTGGGACT...AAAGAAAGAAAGAGAAAGACATAGACCGGTGATAGTTGGTAGAACATACATACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR CCA 90 bp | GTATGTATGTATGTTCTACCAACTATCACCGGTCTATGTCTTTCTCTTTCTTTCACACGCCAATTAAAATaGTTACACACTGAAGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VCMYVLPTITGLCLSLSFTRQLK*LHTEVR Trigger: GCGGACTTCAGTGTGTAACCATTTTAATTGGCGTGT...GAAAGAAAGAGAAAGACATAGACCGGTGATAGTTGGTAGAACATACATACATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| 3UTR CAA 72 bp | ACCCCAGAGACTCAAGTTCTCACAAGCTCAAGTTCCTaGTATAAAATGACAGAATGTTTGCATATAACCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TPETQVLTSSSS*YKMTECLHITY Trigger: GTAGGTTATATGCAAACATTCTGTCATTTTATACAAGGAACTTGAGCTTGTGAGAACTTGAGTCTCTGGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR TCA 90 bp | CCTATGCTTTTCCATCTGTCACCTGCCTATGTATGTATGTATGTATGTATGTATAATATACTGATAGGTTaGATCAATGGGATCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: PMLFHLSPAYVCMYVCMYNILIG*INGIHP Trigger: TGGGTGGATCCCATTGATTCAACCTATCAGTATATT...ATACATACATACATACATACATACATAGGCAGGTGACAGATGGAAAAGCATAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR CCA 90 bp | ATGAAAGGTACAGATAAAGGGCTGGTTATATCTAAAATGTATCGTCTCTCGCTTCTGGGGAAAATTCCTTaGTTGGATTTAACATTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: MKGTDKGLVISKMYRLSLLGKIP*LDLTLA Trigger: TGCCAATGTTAAATCCAACCAAGGAATTTTCCCCAG...AAGCGAGAGACGATACATTTTAGATATAACCAGCCCTTTATCTGTACCTTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS GCA 90 bp | GCACCTTTCTTCTCCTCAATGAGCAGCTGGAAGAGGGTCTCCTGCTaGCTGCACGCCCTGGCGATGTTAGCAGCCTTCTCGGAGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: APFFSSMSSWKRVSC*LHALAMLAAFSETQ Trigger: CTGTGTCTCCGAGAAGGCTGCTAACATCGCCAGGGCGTGCAGGCAGCAGGAGACCCTCTTCCAGCTGCTCATTGAGGAGAAGAAAGGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027271.9 ENSMUST00000159725.2 ENSMUST00000162576.8 ENSMUST00000177279.8 |
||
| CDS GCA 90 bp | TCTGCACCTTTCTTCTCCTCAATGAGCAGCTGGAAGAGGGTCTCCTaGTGCCTGCACGCCCTGGCGATGTTAGCAGCCTTCTCGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SAPFFSSMSSWKRVS*CLHALAMLAAFSET Trigger: TGTCTCCGAGAAGGCTGCTAACATCGCCAGGGCGTGCAGGCAGCAGGAGACCCTCTTCCAGCTGCTCATTGAGGAGAAGAAAGGTGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027271.9 ENSMUST00000159725.2 ENSMUST00000162576.8 ENSMUST00000177279.8 |
||
| CDS GCA 90 bp | TTCCGATGCCGGCATGTTGCCGTTAAGGACCTTGCTGAGAAGCTCTaGCGTCTCCTCCTCCGTGGACTGCAGCTCCACTGTGATCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FRCRHVAVKDLAEKL*RLLLRGLQLHCDLF Trigger: GAAAAGATCACAGTGGAGCTGCAGTCCACGGAGGAGGAGACGGCAGAGCTTCTCAGCAAGGTCCTTAACGGCAACATGCCGGCATCGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027271.9 ENSMUST00000177279.8 |
||
| CDS CCA 90 bp | AACTTCTTGTTCTTCTCTGCACCTTTCTTCTCCTCAATGAGCAGCTaGAAGAGGGTCTCCTGCTGCCTGCACGCCCTGGCGATGTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NFLFFSAPFFSSMSS*KRVSCCLHALAMLA Trigger: TGCTAACATCGCCAGGGCGTGCAGGCAGCAGGAGACCCTCTTCCAGCTGCTCATTGAGGAGAAGAAAGGTGCAGAGAAGAACAAGAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027271.9 ENSMUST00000159725.2 ENSMUST00000162576.8 ENSMUST00000177279.8 |
||
| CDS-3UTR CAA 90 bp | TCAGGAAGGTGTCCAGCCGATTCCTGGACCTGTAAGCTATCAGCCCTCCCTTGTACATCCGCCAGGGTCTaGAAATCTGCAGCAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGRCPADSWTCKLSALPCTSARV*KSAANF Trigger: GAAGTTTGCTGCAGATTTCAAGACCCTGGCGGATGT...ACAAGGGAGGGCTGATAGCTTACAGGTCCAGGAATCGGCTGGACACCTTCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTTTTGGATGAGGCGGCTCAGGAAGGTGTCCAGCCGATTCCTGGACCTGTATCTGCAGCAAACTTCTaGTTCTTCTCTGCACCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: EVLDEAAQEGVQPIPGPVSAANF*FFSAPF Trigger: GAAAGGTGCAGAGAAGAACAAGAAGTTTGCTGCAGA...TACAGGTCCAGGAATCGGCTGGACACCTTCCTGAGCCGCCTCATCCAAAACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177279.8 |
||
| CDS GCA 90 bp | ATCCGCCAGGGTCTTGAAATCTGCAGCAAACTTCTTGTTCTTCTCTaGACCTTTCTTCTCCTCAATGAGCAGCTGGAAGAGGGTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IRQGLEICSKLLVLL*TFLLLNEQLEEGLL Trigger: CAGGAGACCCTCTTCCAGCTGCTCATTGAGGAGAAGAAAGGTGCAGAGAAGAACAAGAAGTTTGCTGCAGATTTCAAGACCCTGGCGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027271.9 ENSMUST00000159725.2 ENSMUST00000162576.8 ENSMUST00000177279.8 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGACTTCCTGCAAACGACTTTAGAAAGCAACCACCCCAGAGACTCAAGTTCTGCAGCAAACTTCTaGTTCTTCTCTGCACCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: APDFLQTTLESNHPRDSSSAANF*FFSAPF Trigger: GAAAGGTGCAGAGAAGAACAAGAAGTTTGCTGCAGA...ACTTGAGTCTCTGGGGTGGTTGCTTTCTAAAGTCGTTTGCAGGAAGTCTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR CAA 90 bp | AGAATGTTTGCATATAACCTACTTAACTTTCTCCTGTATGCACCAGAATTCAGAATCAGCCCTCCCTTGTaGGCCCAGAGTTCCACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RMFAYNLLNFLLYAPEFRISPPL*AQSSTP Trigger: TGGGGTGGAACTCTGGGCCAACAAGGGAGGGCTGAT...TCTGAATTCTGGTGCATACAGGAGAAAGTTAAGTAGGTTATATGCAAACATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR CAA 90 bp | TGTATGTATGTTCTACCAACTATCACCGGTCTATGTCTTTCTCTTTCTTTCTTTGCTATCAGCCCTCCCTaGTTGGCCCAGAGTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: CMYVLPTITGLCLSLSFFAISPP*LAQSST Trigger: GGTGGAACTCTGGGCCAACAAGGGAGGGCTGATAGC...AAAGAAAGAAAGAGAAAGACATAGACCGGTGATAGTTGGTAGAACATACATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS GCA 90 bp | TTTTATAACTTCCTGCACCAGCACATCCGCCAGGGTCTTGAAATCTaGAGCAAACTTCTTGTTCTTCTCTGCACCTTTCTTCTCCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: FYNFLHQHIRQGLEI*SKLLVLLCTFLLLN Trigger: ATTGAGGAGAAGAAAGGTGCAGAGAAGAACAAGAAGTTTGCTGCAGATTTCAAGACCCTGGCGGATGTGCTGGTGCAGGAAGTTATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027271.9 ENSMUST00000159725.2 ENSMUST00000162576.8 ENSMUST00000177279.8 |
||
| CDS-3UTR CAA 90 bp | ACAGTTTTGCTCCTCCCTTGGTATTTTATTGAAGGGTTCCAAGCAACAATAACACGCGAAAGAGCAGCTTaGATGGTGTCTTTTTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TVLLLPWYFIEGFQATITRERAA*MVSFSL Trigger: CAGCGAAAAAGACACCATCAAAGCTGCTCTTTCGCG...TGTTATTGTTGCTTGGAACCCTTCAATAAAATACCAAGGGAGGAGCAAAACTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR CAA 90 bp | CCTATGCTTTTCCATCTGTCACCTGCCTATGTATGTATGTATGTATGTATGTATACATCCGCCAGGGTCTaGAAATCTGCAGCAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: PMLFHLSPAYVCMYVCMYTSARV*KSAANF Trigger: GAAGTTTGCTGCAGATTTCAAGACCCTGGCGGATGT...ATACATACATACATACATACATACATAGGCAGGTGACAGATGGAAAAGCATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS-3UTR CAA 90 bp | ACAGTTTTGCTCCTCCCTTGGTATTTTATTGAAGGGTTCCAAGCAACAATAACACCCAAGCCTGGAAACTaGTTTTCCATGTTCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TVLLLPWYFIEGFQATITPKPGN*FSMFCF Trigger: AAAACAGAACATGGAAAACAAGTTTCCAGGCTTGGG...TGTTATTGTTGCTTGGAACCCTTCAATAAAATACCAAGGGAGGAGCAAAACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027271.9 |
||
| CDS GCA 72 bp | CGGCATGTTGCCGTTAAGGACCTTGCTGAGAAGCTCTaGCGTCTCCTCCTCCGTGGACTGCAGCTCCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: RHVAVKDLAEKL*RLLLRGLQLHC Trigger: ACAGTGGAGCTGCAGTCCACGGAGGAGGAGACGGCAGAGCTTCTCAGCAAGGTCCTTAACGGCAACATGCCG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027271.9 ENSMUST00000177279.8 |
||
| CDS GCA 72 bp | TTCTTCTCCTCAATGAGCAGCTGGAAGAGGGTCTCCTaGTGCCTGCACGCCCTGGCGATGTTAGCAGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FFSSMSSWKRVS*CLHALAMLAAF Trigger: GAAGGCTGCTAACATCGCCAGGGCGTGCAGGCAGCAGGAGACCCTCTTCCAGCTGCTCATTGAGGAGAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027271.9 ENSMUST00000159725.2 ENSMUST00000162576.8 ENSMUST00000177279.8 |
||
| CDS CCA 72 bp | TTCTTCTCTGCACCTTTCTTCTCCTCAATGAGCAGCTaGAAGAGGGTCTCCTGCTGCCTGCACGCCCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: FFSAPFFSSMSS*KRVSCCLHALA Trigger: CGCCAGGGCGTGCAGGCAGCAGGAGACCCTCTTCCAGCTGCTCATTGAGGAGAAGAAAGGTGCAGAGAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027271.9 ENSMUST00000159725.2 ENSMUST00000162576.8 ENSMUST00000177279.8 |
||
| CDS GCA 72 bp | TTCCTGCACCAGCACATCCGCCAGGGTCTTGAAATCTaGAGCAAACTTCTTGTTCTTCTCTGCACCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FLHQHIRQGLEI*SKLLVLLCTFL Trigger: AAGAAAGGTGCAGAGAAGAACAAGAAGTTTGCTGCAGATTTCAAGACCCTGGCGGATGTGCTGGTGCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027271.9 ENSMUST00000159725.2 ENSMUST00000162576.8 ENSMUST00000177279.8 |
||
| CDS CAA 72 bp | TTTATAACTTCCTGCACCAGCACATCCGCCAGGGTCTaGAAATCTGCAGCAAACTTCTTGTTCTTCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: FITSCTSTSARV*KSAANFLFFSA Trigger: TGCAGAGAAGAACAAGAAGTTTGCTGCAGATTTCAAGACCCTGGCGGATGTGCTGGTGCAGGAAGTTATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027271.9 ENSMUST00000159725.2 ENSMUST00000162576.8 ENSMUST00000177279.8 |
||
| CDS CAA 90 bp | ATGTTCTGTTTTATAACTTCCTGCACCAGCACATCCGCCAGGGTCTaGAAATCTGCAGCAAACTTCTTGTTCTTCTCTGCACCTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: MFCFITSCTSTSARV*KSAANFLFFSAPFF Trigger: GAAGAAAGGTGCAGAGAAGAACAAGAAGTTTGCTGCAGATTTCAAGACCCTGGCGGATGTGCTGGTGCAGGAAGTTATAAAACAGAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027271.9 ENSMUST00000159725.2 ENSMUST00000162576.8 ENSMUST00000177279.8 |
||