Pregenerated sensors for INO80E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030689Ensembl transcript IDs: ENSMUST00000050833.14, ENSMUST00000106342.8, ENSMUST00000106343.3, ENSMUST00000205349.2, ENSMUST00000205619.2, ENSMUST00000205958.2, ENSMUST00000206090.2, ENSMUST00000206349.2, ENSMUST00000206968.2
Found 198 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATGCAACCACCCGTGCACAGGGCCACGTGGGAGTCTCCTGCCAGTaGCCCACCCCATCCTGCAGCTCCTTTCTTGGCCTTTCCAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: YATTRAQGHVGVSCQ*PTPSCSSFLGLSRL Trigger: CAGCCTGGAAAGGCCAAGAAAGGAGCTGCAGGATGGGGTGGGGCACTGGCAGGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR TCA 90 bp | ACTGTCTACATCAGCCGGACACAGCCCTGGAGCGCTGGCATACTCTaGCCAGCGAGCTGCCCCCTGCAGCAGGGGCTTACCCTTTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: TVYISRTQPWSAGIL*PASCPLQQGLTLWL Trigger: AAGCCAAAGGGTAAGCCCCTGCTGCAGGGGGCAGCTCGCTGGTCAGAGTATGCCAGCGCTCCAGGGCTGTGTCCGGCTGATGTAGACAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR GCA 90 bp | TCCTCCTGCCTGCCTTGCTGTTACCTGCAAATATGCAACCACCCGTaGACAGGGCCACGTGGGAGTCTCCTGCCAGTGCCCCACCCCATC | + |
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Preference number: 1 (lower is better) Translates to: SSCLPCCYLQICNHP*TGPRGSLLPVPHPI Trigger: GATGGGGTGGGGCACTGGCAGGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR CCA 90 bp | CACTGGAATGACTGTCTACATCAGCCGGACACAGCCCTGGAGCGCTaGCATACTCTGACCAGCGAGCTGCCCCCTGCAGCAGGGGCTTAC | + |
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Preference number: 1 (lower is better) Translates to: HWNDCLHQPDTALER*HTLTSELPPAAGAY Trigger: GTAAGCCCCTGCTGCAGGGGGCAGCTCGCTGGTCAGAGTATGCCAGCGCTCCAGGGCTGTGTCCGGCTGATGTAGACAGTCATTCCAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR CCA 90 bp | ACCAGGTGCTCTGAGGGAAGTGGAGGAGAGTGGGCGCTGACACGTTaGCCTGCCTTGCCTGTTCTTCAGGTGGTGTGTCTCTGGGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: TRCSEGSGGEWALTR*PALPVLQVVCLWGQ Trigger: CTGGCCCCAGAGACACACCACCTGAAGAACAGGCAAGGCAGGCCAACGTGTCAGCGCCCACTCTCCTCCACTTCCCTCAGAGCACCTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR TCA 90 bp | CAGAGCCCACCAGGTGCTCTGAGGGAAGTGGAGGAGAGTGGGCGCTaGCACGTTGGCCTGCCTTGCCTGTTCTTCAGGTGGTGTGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: QSPPGALREVEESGR*HVGLPCLFFRWCVS Trigger: AGAGACACACCACCTGAAGAACAGGCAAGGCAGGCCAACGTGTCAGCGCCCACTCTCCTCCACTTCCCTCAGAGCACCTGGTGGGCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR GCA 90 bp | TGCAAATATGCAACCACCCGTGCACAGGGCCACGTGGGAGTCTCCTaGCAGTGCCCCACCCCATCCTGCAGCTCCTTTCTTGGCCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: CKYATTRAQGHVGVS*QCPTPSCSSFLGLS Trigger: GGAAAGGCCAAGAAAGGAGCTGCAGGATGGGGTGGGGCACTGGCAGGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATATTTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR CCA 90 bp | CTGACACGTTGGCCTGCCTTGCCTGTTCTTCAGGTGGTGTGTCTCTaGGGCCAGGAGCCCGGGGAGAGGCCCAGAAACACTGGAATGACT | + |
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Preference number: 1 (lower is better) Translates to: LTRWPALPVLQVVCL*GQEPGERPRNTGMT Trigger: AGTCATTCCAGTGTTTCTGGGCCTCTCCCCGGGCTCCTGGCCCCAGAGACACACCACCTGAAGAACAGGCAAGGCAGGCCAACGTGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR CCA 90 bp | TTGCTGTTACCTGCAAATATGCAACCACCCGTGCACAGGGCCACGTaGGAGTCTCCTGCCAGTGCCCCACCCCATCCTGCAGCTCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: LLLPANMQPPVHRAT*ESPASAPPHPAAPF Trigger: GAAAGGAGCTGCAGGATGGGGTGGGGCACTGGCAGGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATATTTGCAGGTAACAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR GCA 90 bp | CCCCTCCGCCGCCTCAAGCCTTCACAGAAGAAGCATTTTAACATCTaGCTTGAGCGCCAGGTCCCGGTCCGTGTGGGTCTAACAGGTACG | + |
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Preference number: 1 (lower is better) Translates to: PLRRLKPSQKKHFNI*LERQVPVRVGLTGT Trigger: CGTACCTGTTAGACCCACACGGACCGGGACCTGGCGCTCAAGGCAGATGTTAAAATGCTTCTTCTGTGAAGGCTTGAGGCGGCGGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205619.2 |
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| 3UTR GCA 90 bp | CATATGCAAACTTCCTCCTGCCTGCCTTGCTGTTACCTGCAAATATaGAACCACCCGTGCACAGGGCCACGTGGGAGTCTCCTGCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: HMQTSSCLPCCYLQI*NHPCTGPRGSLLPV Trigger: CACTGGCAGGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGTTTGCATATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR GCA 90 bp | CTGGGATGTAAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTaGATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCGAAGCATGG | + |
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Preference number: 1 (lower is better) Translates to: LGCKGRTLPPSSGTL*MFTPFLIVSVAEAW Trigger: CCATGCTTCGGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTTACATCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
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| 3UTR TCA 90 bp | CCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTaGTTGTGTCAGTGGCCGAAGCATGGCAACTGGGCATCAATAAAC | + |
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Preference number: 1 (lower is better) Translates to: PCHLPRGHCACLRLF*LCQWPKHGNWASIN Trigger: GTTTATTGATGCCCAGTTGCCATGCTTCGGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
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| 3UTR GCA 90 bp | TATATTCACATATGCAAACTTCCTCCTGCCTGCCTTGCTGTTACCTaGAAATATGCAACCACCCGTGCACAGGGCCACGTGGGAGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: YIHICKLPPACLAVT*KYATTRAQGHVGVS Trigger: GGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGTTTGCATATGTGAATATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR GCA 90 bp | GGGACTGTGGAGAGCTATATTCACATATGCAAACTTCCTCCTGCCTaGCTTGCTGTTACCTGCAAATATGCAACCACCCGTGCACAGGGC | + |
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Preference number: 1 (lower is better) Translates to: GTVESYIHICKLPPA*LAVTCKYATTRAQG Trigger: GCCCTGTGCACGGGTGGTTGCATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGTTTGCATATGTGAATATAGCTCTCCACAGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR GCA 90 bp | GGGCTGGGGACAGCGATGTGGTTAGGCCTCACAGAAAGCACCGCCTaGCTTTGTTCTCAGGAATTCTTCTATGAGATTGAACTCTCCACT | + |
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Preference number: 1 (lower is better) Translates to: GLGTAMWLGLTESTA*LCSQEFFYEIELST Trigger: AGTGGAGAGTTCAATCTCATAGAAGAATTCCTGAGAACAAAGGCAGGCGGTGCTTTCTGTGAGGCCTAACCACATCGCTGTCCCCAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR GCA 90 bp | TGTGGAGAGCTATATTCACATATGCAAACTTCCTCCTGCCTGCCTTaGTGTTACCTGCAAATATGCAACCACCCGTGCACAGGGCCACGT | + |
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Preference number: 1 (lower is better) Translates to: CGELYSHMQTSSCLP*CYLQICNHPCTGPR Trigger: ACGTGGCCCTGTGCACGGGTGGTTGCATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGTTTGCATATGTGAATATAGCTCTCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR TCA 90 bp | ACCTGTCTTATTTTTGTGAGTCTCTGTGACGGGCCTGTCTTCTTGTaGGGGACTGTGGAGAGCTATATTCACATATGCAAACTTCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: TCLIFVSLCDGPVFL*GTVESYIHICKLPP Trigger: AGGAGGAAGTTTGCATATGTGAATATAGCTCTCCACAGTCCCTCACAAGAAGACAGGCCCGTCACAGAGACTCACAAAAATAAGACAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR CAA 90 bp | TCTGAGGGAAGTGGAGGAGAGTGGGCGCTGACACGTTGGCCTGCCTaGCCTGTTCTTCAGGTGGTGTGTCTCTGGGGCCAGGAGCCCGGG | + |
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Preference number: 2 (lower is better) Translates to: SEGSGGEWALTRWPA*PVLQVVCLWGQEPG Trigger: CCCGGGCTCCTGGCCCCAGAGACACACCACCTGAAGAACAGGCAAGGCAGGCCAACGTGTCAGCGCCCACTCTCCTCCACTTCCCTCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR GCA 90 bp | GGCTTGAGTGAACAGCAGCTGTCCATCACAGGCCCTCTGGGGCCGGGTCCAGTACACGTGGGAGTCTCCTaGCAGTGCCCCACCCCATCC | + |
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Preference number: 2 (lower is better) Translates to: GLSEQQLSITGPLGPGPVHVGVS*QCPTPS Trigger: GGATGGGGTGGGGCACTGGCAGGAGACTCCCACGTG...TACTGGACCCGGCCCCAGAGGGCCTGTGATGGACAGCTGCTGTTCACTCAAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR CCA 90 bp | GGCTTGAGTGAACAGCAGCTGTCCATCACAGGCCCTCTGGGGCCGGGTCCAGTACCTTTCCAGGCTGCCTaGTCCCCTGCCCCACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GLSEQQLSITGPLGPGPVPFQAA*SPAPQG Trigger: TCCCTGTGGGGCAGGGGACCAGGCAGCCTGGAAAGG...TACTGGACCCGGCCCCAGAGGGCCTGTGATGGACAGCTGCTGTTCACTCAAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR CCA 90 bp | ATCTTGAGTTTCCGGGGTAGGCGGGGCCGTTTCTCCAGCTTGGGCCTCAGGGGGCAGCGAGCTCAGGTATaGGGAGGGGGCCCCAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: ILSFRGRRGRFSSLGLRGQRAQV*GGGPRS Trigger: ACTTCTGGGGCCCCCTCCCCATACCTGAGCTCGCTG...CCCCCTGAGGCCCAAGCTGGAGAAACGGCCCCGCCTACCCCGGAAACTCAAGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000205958.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGAGTGGGCGCTGACACGTTGGCCTGCCTTGCCTGTTCTTCAGGTGGTGTGAGCGCTGGCATACTCTaGCCAGCGAGCTGCCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: RRVGADTLACLACSSGGVSAGIL*PASCPL Trigger: CAGGGGGCAGCTCGCTGGTCAGAGTATGCCAGCGCT...CACACCACCTGAAGAACAGGCAAGGCAGGCCAACGTGTCAGCGCCCACTCTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR GCA 90 bp | AATATGCAACCACCCGTGCACAGGGCCACGTGGGAGTCTCCTGCCAGTGCCCCAAGGAGTGCTGTGAGGTaGCTGGCAGGTGGCACTGGG | + |
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Preference number: 2 (lower is better) Translates to: NMQPPVHRATWESPASAPRSAVR*LAGGTG Trigger: CCCAGTGCCACCTGCCAGGCACCTCACAGCACTCCT...TGGGGCACTGGCAGGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR GCA 90 bp | AATATGCAACCACCCGTGCACAGGGCCACGTGGGAGTCTCCTGCCAGTGCCCCACTGGCACAGGAGGAGTaGTGTGAGGTGCCTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: NMQPPVHRATWESPASAPLAQEE*CEVPGR Trigger: CCTGCCAGGCACCTCACAGCACTCCTCCTGTGCCAG...TGGGGCACTGGCAGGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR CCA 90 bp | GGAGCCCGGGGAGAGGCCCAGAAACACTGGAATGACTGTCTACATCAGCCGGACCCATCACAGGCCCTCTaGGGCCGGGTCCAGTACCCA | + |
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Preference number: 2 (lower is better) Translates to: GARGEAQKHWNDCLHQPDPSQAL*GRVQYP Trigger: TGGGTACTGGACCCGGCCCCAGAGGGCCTGTGATGG...GTCCGGCTGATGTAGACAGTCATTCCAGTGTTTCTGGGCCTCTCCCCGGGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGGATGTAAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTAGGAGTGCTGTGAGGTaGCTGGCAGGTGGCACTGGG | + |
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Preference number: 2 (lower is better) Translates to: GWDVRAGPCHLPRGHCACRSAVR*LAGGTG Trigger: CCCAGTGCCACCTGCCAGGCACCTCACAGCACTCCT...ACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTTACATCCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAGAGTGGGCGCTGACACGTTGGCCTGCCTTGCCTGTTCTTCAGGTGGTGTGTTCCCTGGATGGGGCTaGGATGTAAGGGCAGGACCC | + |
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Preference number: 2 (lower is better) Translates to: RRVGADTLACLACSSGGVFPGWG*DVRAGP Trigger: GGGTCCTGCCCTTACATCCCAGCCCCATCCAGGGAA...CACACCACCTGAAGAACAGGCAAGGCAGGCCAACGTGTCAGCGCCCACTCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR CCA 90 bp | AATATGCAACCACCCGTGCACAGGGCCACGTGGGAGTCTCCTGCCAGTGCCCCACTGCAGCTCCTTTCTTaGCCTTTCCAGGCTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: NMQPPVHRATWESPASAPLQLLS*PFQAAW Trigger: CCAGGCAGCCTGGAAAGGCCAAGAAAGGAGCTGCAG...TGGGGCACTGGCAGGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR TCA 90 bp | AATATGCAACCACCCGTGCACAGGGCCACGTGGGAGTCTCCTGCCAGTGCCCCATTGAGGAAGTGGGCTTaGGTTTGCTGGCACAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: NMQPPVHRATWESPASAPLRKWA*VCWHRR Trigger: CCTCCTGTGCCAGCAAACTCAAGCCCACTTCCTCAA...TGGGGCACTGGCAGGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR CCA 90 bp | GGCCGGGTCCAGTACCCAACCTTCGCACGAGTGTGTTGCACGTTTACATGGGGTTTCCCTGGATGGGGCTaGGATGTAAGGGCAGGACCC | + |
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Preference number: 2 (lower is better) Translates to: GRVQYPTFARVCCTFTWGFPGWG*DVRAGP Trigger: GGGTCCTGCCCTTACATCCCAGCCCCATCCAGGGAA...ACCCCATGTAAACGTGCAACACACTCGTGCGAAGGTTGGGTACTGGACCCGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR GCA 90 bp | AAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTAGGAGTGCTGTGAGGTaGCTGGCAGGTGGCACTGGG | + |
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Preference number: 2 (lower is better) Translates to: KGRTLPPSSGTLCMFTPFRSAVR*LAGGTG Trigger: CCCAGTGCCACCTGCCAGGCACCTCACAGCACTCCT...AAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
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| 3UTR-3UTR GCA 90 bp | AACTTCCTCCTGCCTGCCTTGCTGTTACCTGCAAATATGCAACCACCCGTGCACCACGTGGGAGTCTCCTaGCAGTGCCCCACCCCATCC | + |
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Preference number: 2 (lower is better) Translates to: NFLLPALLLPANMQPPVHHVGVS*QCPTPS Trigger: GGATGGGGTGGGGCACTGGCAGGAGACTCCCACGTG...GTGCACGGGTGGTTGCATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR GCA 90 bp | GGAGCCCGGGGAGAGGCCCAGAAACACTGGAATGACTGTCTACATCAGCCGGACTTCGCACGAGTGTGTTaGACGTTTACATGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: GARGEAQKHWNDCLHQPDFARVC*TFTWGG Trigger: CCCACCCCATGTAAACGTGCAACACACTCGTGCGAA...GTCCGGCTGATGTAGACAGTCATTCCAGTGTTTCTGGGCCTCTCCCCGGGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR CCA 90 bp | AATAAAGTTGGGCTGGGGACAGCGATGTGGTTAGGCCTCACAGAAAGCACCGCCACAGCCCTGGAGCGCTaGCATACTCTGACCAGCGAG | + |
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Preference number: 2 (lower is better) Translates to: NKVGLGTAMWLGLTESTATALER*HTLTSE Trigger: CTCGCTGGTCAGAGTATGCCAGCGCTCCAGGGCTGT...GGCGGTGCTTTCTGTGAGGCCTAACCACATCGCTGTCCCCAGCCCAACTTTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR CCA 90 bp | AGTAGAAATAAAGTTGGGCTGGGGACAGCGATGTGGTTAGGCCTCACAGAAAGCCAGGTGGTGTGTCTCTaGGGCCAGGAGCCCGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SRNKVGLGTAMWLGLTESQVVCL*GQEPGE Trigger: CTCCCCGGGCTCCTGGCCCCAGAGACACACCACCTG...GCTTTCTGTGAGGCCTAACCACATCGCTGTCCCCAGCCCAACTTTATTTCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR TCA 90 bp | AATATGCAACCACCCGTGCACAGGGCCACGTGGGAGTCTCCTGCCAGTGCCCCATGTTTACGCCTTTTCTaGTTGTGTCAGTGGCCGAAG | + |
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Preference number: 2 (lower is better) Translates to: NMQPPVHRATWESPASAPCLRLF*LCQWPK Trigger: CTTCGGCCACTGACACAATCAGAAAAGGCGTAAACA...TGGGGCACTGGCAGGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR TCA 90 bp | AGTAGAAATAAAGTTGGGCTGGGGACAGCGATGTGGTTAGGCCTCACAGAAAGCAGCGCTGGCATACTCTaGCCAGCGAGCTGCCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: SRNKVGLGTAMWLGLTESSAGIL*PASCPL Trigger: CAGGGGGCAGCTCGCTGGTCAGAGTATGCCAGCGCT...GCTTTCTGTGAGGCCTAACCACATCGCTGTCCCCAGCCCAACTTTATTTCTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR GCA 90 bp | GGCTTGAGTGAACAGCAGCTGTCCATCACAGGCCCTCTGGGGCCGGGTCCAGTATCCTCGGGGACATTGTaGATGTTTACGCCTTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: GLSEQQLSITGPLGPGPVSSGTL*MFTPFL Trigger: CAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGA...TACTGGACCCGGCCCCAGAGGGCCTGTGATGGACAGCTGCTGTTCACTCAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR GCA 90 bp | GCTATATTCACATATGCAAACTTCCTCCTGCCTGCCTTGCTGTTACCTGCAAATGGCTGCCTGGTCCCCTaGCCCACAGGGAGGGGGTCG | + |
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Preference number: 2 (lower is better) Translates to: AIFTYANFLLPALLLPANGCLVP*PTGRGS Trigger: CGACCCCCTCCCTGTGGGGCAGGGGACCAGGCAGCC...ATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGTTTGCATATGTGAATATAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR GCA 90 bp | AATAAAGTTGGGCTGGGGACAGCGATGTGGTTAGGCCTCACAGAAAGCACCGCCTGCCCCACCCCATCCTaGAGCTCCTTTCTTGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: NKVGLGTAMWLGLTESTACPTPS*SSFLGL Trigger: AAGGCCAAGAAAGGAGCTGCAGGATGGGGTGGGGCA...GGCGGTGCTTTCTGTGAGGCCTAACCACATCGCTGTCCCCAGCCCAACTTTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR GCA 90 bp | ACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCTGGCACAGGAGGAGTaGTGTGAGGTGCCTGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: TFLGDIVHVYAFSDCVSGLAQEE*CEVPGR Trigger: CCTGCCAGGCACCTCACAGCACTCCTCCTGTGCCAG...GCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGCCGGGTCCAGTACCCAACCTTCGCACGAGTGTGTTGCACGTTTACATGGGGACTAAATCCCAGCCCTaGGTAGCTGCTCTTCTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: GPGPVPNLRTSVLHVYMGTKSQP*VAALLK Trigger: CTTTAGAAGAGCAGCTACGCAGGGCTGGGATTTAGT...CCCCATGTAAACGTGCAACACACTCGTGCGAAGGTTGGGTACTGGACCCGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR GCA 90 bp | AGGAGAGTGGGCGCTGACACGTTGGCCTGCCTTGCCTGTTCTTCAGGTGGTGTGACTAAATCCCAGCCCTaGGTAGCTGCTCTTCTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RRVGADTLACLACSSGGVTKSQP*VAALLK Trigger: CTTTAGAAGAGCAGCTACGCAGGGCTGGGATTTAGT...CACACCACCTGAAGAACAGGCAAGGCAGGCCAACGTGTCAGCGCCCACTCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR GCA 90 bp | GGAGCCCGGGGAGAGGCCCAGAAACACTGGAATGACTGTCTACATCAGCCGGACTGCCTTGCTGTTACCTaGAAATATGCAACCACCCGT | + |
|
Preference number: 2 (lower is better) Translates to: GARGEAQKHWNDCLHQPDCLAVT*KYATTR Trigger: ACGGGTGGTTGCATATTTGCAGGTAACAGCAAGGCA...GTCCGGCTGATGTAGACAGTCATTCCAGTGTTTCTGGGCCTCTCCCCGGGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR CCA 90 bp | AATATGCAACCACCCGTGCACAGGGCCACGTGGGAGTCTCCTGCCAGTGCCCCACCGAAGCATGGCAACTaGGCATCAATAAACATCTCT | + |
|
Preference number: 2 (lower is better) Translates to: NMQPPVHRATWESPASAPPKHGN*ASINIS Trigger: AGAGATGTTTATTGATGCCCAGTTGCCATGCTTCGG...TGGGGCACTGGCAGGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR CCA 90 bp | AACTTCCTCCTGCCTGCCTTGCTGTTACCTGCAAATATGCAACCACCCGTGCACCTGCAGCTCCTTTCTTaGCCTTTCCAGGCTGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: NFLLPALLLPANMQPPVHLQLLS*PFQAAW Trigger: CCAGGCAGCCTGGAAAGGCCAAGAAAGGAGCTGCAG...GTGCACGGGTGGTTGCATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR TCA 90 bp | CTGGGGACAGCGATGTGGTTAGGCCTCACAGAAAGCACCGCCTGCCTTTGTTCTCCAGAAACACTGGAATaGCTGTCTACATCAGCCGGA | + |
|
Preference number: 2 (lower is better) Translates to: LGTAMWLGLTESTACLCSPETLE*LSTSAG Trigger: TCCGGCTGATGTAGACAGTCATTCCAGTGTTTCTGG...AGAACAAAGGCAGGCGGTGCTTTCTGTGAGGCCTAACCACATCGCTGTCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR GCA 90 bp | GGCCGGGTCCAGTACCCAACCTTCGCACGAGTGTGTTGCACGTTTACATGGGGTTCCTCGGGGACATTGTaGATGTTTACGCCTTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: GRVQYPTFARVCCTFTWGSSGTL*MFTPFL Trigger: CAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGA...ACCCCATGTAAACGTGCAACACACTCGTGCGAAGGTTGGGTACTGGACCCGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR GCA 90 bp | AGTAGAAATAAAGTTGGGCTGGGGACAGCGATGTGGTTAGGCCTCACAGAAAGCGCAGAGCCCACCAGGTaGTCTGAGGGAAGTGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SRNKVGLGTAMWLGLTESAEPTR*SEGSGG Trigger: TCCTCCACTTCCCTCAGAGCACCTGGTGGGCTCTGC...GCTTTCTGTGAGGCCTAACCACATCGCTGTCCCCAGCCCAACTTTATTTCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR CCA 90 bp | AATAAAGTTGGGCTGGGGACAGCGATGTGGTTAGGCCTCACAGAAAGCACCGCCTTGAACTCTCCACTCTaGCCACTAAGACCCTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: NKVGLGTAMWLGLTESTALNSPL*PLRPWR Trigger: CCTCCAGGGTCTTAGTGGCCAGAGTGGAGAGTTCAA...GGCGGTGCTTTCTGTGAGGCCTAACCACATCGCTGTCCCCAGCCCAACTTTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR TCA 90 bp | CCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCTTGAGGAAGTGGGCTTaGGTTTGCTGGCACAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: PSSGTLCMFTPFLIVSVALRKWA*VCWHRR Trigger: CCTCCTGTGCCAGCAAACTCAAGCCCACTTCCTCAA...GGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTTCTCAGGAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCCACGTGGGAGTCTCCTaGCAGTGCCCCACCCCATCC | + |
|
Preference number: 2 (lower is better) Translates to: CSQEFFYEIELSTLATKTHVGVS*QCPTPS Trigger: GGATGGGGTGGGGCACTGGCAGGAGACTCCCACGTG...GGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTGAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR GCA 90 bp | AATAAAGTTGGGCTGGGGACAGCGATGTGGTTAGGCCTCACAGAAAGCACCGCCTCCTCCTGCCTGCCTTaGTGTTACCTGCAAATATGC | + |
|
Preference number: 2 (lower is better) Translates to: NKVGLGTAMWLGLTESTASSCLP*CYLQIC Trigger: GCATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGA...GGCGGTGCTTTCTGTGAGGCCTAACCACATCGCTGTCCCCAGCCCAACTTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR CCA 90 bp | GGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTTCAGTGGCCGAAGCATaGCAACTGGGCATCAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: GQDPATFLGDIVHVYAFSSVAEA*QLGINK Trigger: TTTATTGATGCCCAGTTGCCATGCTTCGGCCACTGA...AGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTAGAAATAAAGTTGGGCTGGGGACAGCGATGTGGTTAGGCCTCACAGAAAGCTGTTGCACGTTTACATaGGGTGGGATGCCCCTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: SRNKVGLGTAMWLGLTESCCTFT*GGMPLP Trigger: GGGCAGGGGCATCCCACCCCATGTAAACGTGCAACA...GCTTTCTGTGAGGCCTAACCACATCGCTGTCCCCAGCCCAACTTTATTTCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR CAA 90 bp | CTGTGGAGAGCTATATTCACATATGCAAACTTCCTCCTGCCTGCCTaGCTGTTACCTGCAAATATGCAACCACCCGTGCACAGGGCCACG | + |
|
Preference number: 2 (lower is better) Translates to: LWRAIFTYANFLLPA*LLPANMQPPVHRAT Trigger: CGTGGCCCTGTGCACGGGTGGTTGCATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGTTTGCATATGTGAATATAGCTCTCCACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR TCA 90 bp | TCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCGAATTGAGGAAGTGGGCTTaGGTTTGCTGGCACAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SSGTLCMFTPFLIVSVAELRKWA*VCWHRR Trigger: CCTCCTGTGCCAGCAAACTCAAGCCCACTTCCTCAA...TTCGGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTTCTCAGGAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCGCCCACCAGGTGCTCTaGGGGAAGTGGAGGAGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: CSQEFFYEIELSTLATKTAHQVL*GKWRRV Trigger: CACTCTCCTCCACTTCCCTCAGAGCACCTGGTGGGC...GGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTGAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR GCA 90 bp | GCCTGCCTTTGTTCTCAGGAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCATATGCAACCACCCGTaGACAGGGCCACGTGGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: ACLCSQEFFYEIELSTLAICNHP*TGPRGS Trigger: ACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATAT...GGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTGAGAACAAAGGCAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR CCA 90 bp | GCCTGCCTTTGTTCTCAGGAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCTGCCTGTTCTTCAGGTaGTGTGTCTCTGGGGCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: ACLCSQEFFYEIELSTLACLFFR*CVSGAR Trigger: CCTGGCCCCAGAGACACACCACCTGAAGAACAGGCA...GGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTGAGAACAAAGGCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR TCA 90 bp | AACTTCCTCCTGCCTGCCTTGCTGTTACCTGCAAATATGCAACCACCCGTGCACTGTTTACGCCTTTTCTaGTTGTGTCAGTGGCCGAAG | + |
|
Preference number: 2 (lower is better) Translates to: NFLLPALLLPANMQPPVHCLRLF*LCQWPK Trigger: CTTCGGCCACTGACACAATCAGAAAAGGCGTAAACA...GTGCACGGGTGGTTGCATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGGAGAGCTATATTCACATATGCAAACTTCCTCCTGCCTGCCTTGCTGTTTGCCCCACCCCATCCTaGAGCTCCTTTCTTGGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: TVESYIHICKLPPACLAVCPTPS*SSFLGL Trigger: AAGGCCAAGAAAGGAGCTGCAGGATGGGGTGGGGCA...AACAGCAAGGCAGGCAGGAGGAAGTTTGCATATGTGAATATAGCTCTCCACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGGAGAGCTATATTCACATATGCAAACTTCCTCCTGCCTGCCTTGCTGTTCTGCAGCTCCTTTCTTaGCCTTTCCAGGCTGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: TVESYIHICKLPPACLAVLQLLS*PFQAAW Trigger: CCAGGCAGCCTGGAAAGGCCAAGAAAGGAGCTGCAG...AACAGCAAGGCAGGCAGGAGGAAGTTTGCATATGTGAATATAGCTCTCCACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR CAA 90 bp | CAGAAAGCACCGCCTGCCTTTGTTCTCAGGAATTCTTCTATGAGATaGAACTCTCCACTCTGGCCACTAAGACCCTGGAGGTCACAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: QKAPPAFVLRNSSMR*NSPLWPLRPWRSQS Trigger: AGACTGTGACCTCCAGGGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTGAGAACAAAGGCAGGCGGTGCTTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR GCA 90 bp | TGTTCTCAGGAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCTGCCCCACCCCATCCTaGAGCTCCTTTCTTGGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: CSQEFFYEIELSTLATKTCPTPS*SSFLGL Trigger: AAGGCCAAGAAAGGAGCTGCAGGATGGGGTGGGGCA...GGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTGAGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| 3UTR-3UTR TCA 90 bp | AGTAGAAATAAAGTTGGGCTGGGGACAGCGATGTGGTTAGGCCTCACAGAAAGCTGTTTACGCCTTTTCTaGTTGTGTCAGTGGCCGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SRNKVGLGTAMWLGLTESCLRLF*LCQWPK Trigger: CTTCGGCCACTGACACAATCAGAAAAGGCGTAAACA...GCTTTCTGTGAGGCCTAACCACATCGCTGTCCCCAGCCCAACTTTATTTCTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR GCA 90 bp | GCCTTTGTTCTCAGGAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTATTCGCACGAGTGTGTTaGACGTTTACATGGGGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: AFVLRNSSMRLNSPLWPLFARVC*TFTWGG Trigger: CCCACCCCATGTAAACGTGCAACACACTCGTGCGAA...TAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTGAGAACAAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR TCA 90 bp | CCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCTCAATAAACATCTCTTaGGGAAGTGGGCTTGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PSSGTLCMFTPFLIVSVASINIS*GSGLEF Trigger: AAACTCAAGCCCACTTCCTCAAGAGATGTTTATTGA...GGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGGAGAGCTATATTCACATATGCAAACTTCCTCCTGCCTGCCTTGCTGTTACTAAATCCCAGCCCTaGGTAGCTGCTCTTCTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: TVESYIHICKLPPACLAVTKSQP*VAALLK Trigger: CTTTAGAAGAGCAGCTACGCAGGGCTGGGATTTAGT...AACAGCAAGGCAGGCAGGAGGAAGTTTGCATATGTGAATATAGCTCTCCACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCGATCAATAAACATCTCTTaGGGAAGTGGGCTTGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: FLGDIVHVYAFSDCVSGRSINIS*GSGLEF Trigger: AAACTCAAGCCCACTTCCTCAAGAGATGTTTATTGA...TCGGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
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| 3UTR-3UTR CCA 90 bp | TATATTCACATATGCAAACTTCCTCCTGCCTGCCTTGCTGTTACCTGCAAATATCCGAAGCATGGCAACTaGGCATCAATAAACATCTCT | + |
|
Preference number: 2 (lower is better) Translates to: YIHICKLPPACLAVTCKYPKHGN*ASINIS Trigger: AGAGATGTTTATTGATGCCCAGTTGCCATGCTTCGG...ATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGTTTGCATATGTGAATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGCGGCCCACCCACGGGGCAGTCAGGGGGTCCAACCGACATCTTGAGTTTCCGGGCCGTTTCTCCAGCTaGGGCCTCAGGGGGCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: QRPTHGAVRGSNRHLEFPGRFSS*GLRGLG Trigger: GCCCAGCCCCCTGAGGCCCAAGCTGGAGAAACGGCC...CGGAAACTCAAGATGTCGGTTGGACCCCCTGACTGCCCCGTGGGTGGGCCGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000205958.2 |
||
| 3UTR TCA 72 bp | GCCAGGAGCCCGGGGAGAGGCCCAGAAACACTGGAATaGCTGTCTACATCAGCCGGACACAGCCCTGGAGCG | + |
|
Preference number: 3 (lower is better) Translates to: ARSPGRGPETLE*LSTSAGHSPGA Trigger: CGCTCCAGGGCTGTGTCCGGCTGATGTAGACAGTCATTCCAGTGTTTCTGGGCCTCTCCCCGGGCTCCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR CCA 72 bp | CCTGCAAATATGCAACCACCCGTGCACAGGGCCACGTaGGAGTCTCCTGCCAGTGCCCCACCCCATCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PANMQPPVHRAT*ESPASAPPHPA Trigger: TGCAGGATGGGGTGGGGCACTGGCAGGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATATTTGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR CCA 72 bp | GACTGTCTACATCAGCCGGACACAGCCCTGGAGCGCTaGCATACTCTGACCAGCGAGCTGCCCCCTGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: DCLHQPDTALER*HTLTSELPPAA Trigger: TGCTGCAGGGGGCAGCTCGCTGGTCAGAGTATGCCAGCGCTCCAGGGCTGTGTCCGGCTGATGTAGACAGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR CAA 90 bp | AATATGCAACCACCCGTGCACAGGGCCACGTGGGAGTCTCCTGCCAGTGCCCCACCTGCAGCTCCTTTCTaGGCCTTTCCAGGCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: NMQPPVHRATWESPASAPPAAPF*AFPGCL Trigger: CAGGCAGCCTGGAAAGGCCAAGAAAGGAGCTGCAGG...TGGGGCACTGGCAGGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR GCA 72 bp | GGGAAGTGGAGGAGAGTGGGCGCTGACACGTTGGCCTaGCTTGCCTGTTCTTCAGGTGGTGTGTCTCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GKWRRVGADTLA*LACSSGGVSLG Trigger: CCCCAGAGACACACCACCTGAAGAACAGGCAAGGCAGGCCAACGTGTCAGCGCCCACTCTCCTCCACTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR CCA 72 bp | CTCAGGCAGCTGCAGGGCCAGGTAGTCAGAAGGGAATaGGGGGTAAGGGGGAGAAGCCAGCGAGCTCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LRQLQGQVVRRE*GVRGRSQRAQV Trigger: TACCTGAGCTCGCTGGCTTCTCCCCCTTACCCCCCATTCCCTTCTGACTACCTGGCCCTGCAGCTGCCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000205958.2 |
||
| 3UTR-3UTR CAA 90 bp | AATATGCAACCACCCGTGCACAGGGCCACGTGGGAGTCTCCTGCCAGTGCCCCACCTTCCTCGGGGACATaGTGCATGTTTACGCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: NMQPPVHRATWESPASAPPSSGT*CMFTPF Trigger: AAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGG...TGGGGCACTGGCAGGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR CAA 90 bp | GAATTCATTGGGGAGATCCGAGTGCCCCTCCGCCGCCTCAAGCCTTCACAGAAGATTTTAACATCTGCCTaGAGCGCCAGGTCCCGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: EFIGEIRVPLRRLKPSQKILTSA*SARSRS Trigger: GGACCGGGACCTGGCGCTCAAGGCAGATGTTAAAAT...CTTCTGTGAAGGCTTGAGGCGGCGGAGGGGCACTCGGATCTCCCCAATGAATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205619.2 |
||
| 3UTR GCA 72 bp | ACTTCCTCCTGCCTGCCTTGCTGTTACCTGCAAATATaGAACCACCCGTGCACAGGGCCACGTGGGAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TSSCLPCCYLQI*NHPCTGPRGSL Trigger: GAGACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR CAA 90 bp | AATAAAGTTGGGCTGGGGACAGCGATGTGGTTAGGCCTCACAGAAAGCACCGCCGAAGTGGGCTTGAGTTaGCTGGCACAGGAGGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: NKVGLGTAMWLGLTESTAEVGLS*LAQEEC Trigger: GCACTCCTCCTGTGCCAGCAAACTCAAGCCCACTTC...GGCGGTGCTTTCTGTGAGGCCTAACCACATCGCTGTCCCCAGCCCAACTTTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTGAAGTGGGCTTGAGTTaGCTGGCACAGGAGGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: KGRTLPPSSGTLCMFTPFEVGLS*LAQEEC Trigger: GCACTCCTCCTGTGCCAGCAAACTCAAGCCCACTTC...AAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| 3UTR CCA 72 bp | TACCCAACCTTCGCACGAGTGTGTTGCACGTTTACATaGGGTGGGATGCCCCTGCCCCACACTACCTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: YPTFARVCCTFT*GGMPLPHTTCL Trigger: AAGACAGGTAGTGTGGGGCAGGGGCATCCCACCCCATGTAAACGTGCAACACACTCGTGCGAAGGTTGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR GCA 72 bp | CGCCTCAAGCCTTCACAGAAGAAGCATTTTAACATCTaGCTTGAGCGCCAGGTCCCGGTCCGTGTGGGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: RLKPSQKKHFNI*LERQVPVRVGL Trigger: TAGACCCACACGGACCGGGACCTGGCGCTCAAGGCAGATGTTAAAATGCTTCTTCTGTGAAGGCTTGAGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205619.2 |
||
| 3UTR CCA 72 bp | GGGAGTAGAAATAAAGTTGGGCTGGGGACAGCGATGTaGTTAGGCCTCACAGAAAGCACCGCCTGCCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GSRNKVGLGTAM*LGLTESTACLC Trigger: ACAAAGGCAGGCGGTGCTTTCTGTGAGGCCTAACCACATCGCTGTCCCCAGCCCAACTTTATTTCTACTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR CAA 90 bp | TCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCGAAGCAGAAGTGGGCTTGAGTTaGCTGGCACAGGAGGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SGTLCMFTPFLIVSVAEAEVGLS*LAQEEC Trigger: GCACTCCTCCTGTGCCAGCAAACTCAAGCCCACTTC...TGCTTCGGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCCTTGAGGAAGTGGGCTaGAGTTTGCTGGCACAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PSSGTLCMFTPFLIVSVALEEVG*SLLAQE Trigger: CTCCTGTGCCAGCAAACTCAAGCCCACTTCCTCAAG...GGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| 3UTR TCA 72 bp | CTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTaGTTGTGTCAGTGGCCGAAGCATGGCAACTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LPRGHCACLRLF*LCQWPKHGNWA Trigger: TGCCCAGTTGCCATGCTTCGGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| 3UTR TCA 72 bp | GCCCCACACTACCTGTCTTATTTTTGTGAGTCTCTGTaGCGGGCCTGTCTTCTTGTGAGGGACTGTGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: APHYLSYFCESL*RACLLVRDCGE Trigger: CTCTCCACAGTCCCTCACAAGAAGACAGGCCCGTCACAGAGACTCACAAAAATAAGACAGGTAGTGTGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGGACAGCGATGTGGTTAGGCCTCACAGAAAGCACCGCCTGCCTTTGTTCTTCTGGGACTACGACATaGGCAAATCCAATGACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LGTAMWLGLTESTACLCSSGTTT*ANPMTS Trigger: TGAAGTCATTGGATTTGCCAATGTCGTAGTCCCAGA...AGAACAAAGGCAGGCGGTGCTTTCTGTGAGGCCTAACCACATCGCTGTCCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCTCAGGAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCCCTGCAGCTCCTTTCTaGGCCTTTCCAGGCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CSQEFFYEIELSTLATKTPAAPF*AFPGCL Trigger: CAGGCAGCCTGGAAAGGCCAAGAAAGGAGCTGCAGG...GGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTGAGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR TCA 72 bp | CCGAAGCATGGCAACTGGGCATCAATAAACATCTCTTaGGGAAGTGGGCTTGAGTTTGCTGGCACAGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PKHGNWASINIS*GSGLEFAGTGG Trigger: TCCTCCTGTGCCAGCAAACTCAAGCCCACTTCCTCAAGAGATGTTTATTGATGCCCAGTTGCCATGCTTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCTCAGGAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCGAAGTGGGCTTGAGTTaGCTGGCACAGGAGGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: CSQEFFYEIELSTLATKTEVGLS*LAQEEC Trigger: GCACTCCTCCTGTGCCAGCAAACTCAAGCCCACTTC...GGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTGAGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR CCA 72 bp | GTCTCTGTGACGGGCCTGTCTTCTTGTGAGGGACTGTaGAGAGCTATATTCACATATGCAAACTTCCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VSVTGLSSCEGL*RAIFTYANFLL Trigger: CAGGAGGAAGTTTGCATATGTGAATATAGCTCTCCACAGTCCCTCACAAGAAGACAGGCCCGTCACAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR GCA 72 bp | GAGAGCTATATTCACATATGCAAACTTCCTCCTGCCTaGCTTGCTGTTACCTGCAAATATGCAACCACCCGT | + |
|
Preference number: 3 (lower is better) Translates to: ESYIHICKLPPA*LAVTCKYATTR Trigger: ACGGGTGGTTGCATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGTTTGCATATGTGAATATAGCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR GCA 72 bp | ACAGCGATGTGGTTAGGCCTCACAGAAAGCACCGCCTaGCTTTGTTCTCAGGAATTCTTCTATGAGATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: TAMWLGLTESTA*LCSQEFFYEIE Trigger: TTCAATCTCATAGAAGAATTCCTGAGAACAAAGGCAGGCGGTGCTTTCTGTGAGGCCTAACCACATCGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR-3UTR CAA 90 bp | TATATTCACATATGCAAACTTCCTCCTGCCTGCCTTGCTGTTACCTGCAAATATCCTTCCTCGGGGACATaGTGCATGTTTACGCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: YIHICKLPPACLAVTCKYPSSGT*CMFTPF Trigger: AAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGG...ATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGTTTGCATATGTGAATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTGGGAAAGCCAGCGGCCCACCCACGGGGCAGTCAGGGGGTCCAACCGACACAGCGAGCTCAGGTATaGGGAGGGGGCCCCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WLGKPAAHPRGSQGVQPTQRAQV*GGGPRS Trigger: ACTTCTGGGGCCCCCTCCCCATACCTGAGCTCGCTG...TGTCGGTTGGACCCCCTGACTGCCCCGTGGGTGGGCCGCTGGCTTTCCCAGCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000206090.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGGAAAGCCAGCGGCCCACCCACGGGGCAGTCAGGGGGTCCAACCGACATCGCTCCTCCTCCACACTaGGGCCAGAGTGATCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGKASGPPTGQSGGPTDIAPPPH*GQSDRS Trigger: AGAGCGATCACTCTGGCCGCAGTGTGGAGGAGGAGC...GATGTCGGTTGGACCCCCTGACTGCCCCGTGGGTGGGCCGCTGGCTTTCCCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206090.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCCAGCGGCCCACCCACGGGGCAGTCAGGGGGTCCAACCGACATCTGGTCTGCCGTTTCTCCAGCTTaGGCCTCAGGGGGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KASGPPTGQSGGPTDIWSAVSPA*ASGGWA Trigger: AGCCCAGCCCCCTGAGGCCCAAGCTGGAGAAACGGC...AGACCAGATGTCGGTTGGACCCCCTGACTGCCCCGTGGGTGGGCCGCTGGCTTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000206090.2 |
||
| CDS-3UTR CCA 90 bp | AATATGCAACCACCCGTGCACAGGGCCACGTGGGAGTCTCCTGCCAGTGCCCCAGCCGTTTCTCCAGCTTaGGCCTCAGGGGGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NMQPPVHRATWESPASAPAVSPA*ASGGWA Trigger: AGCCCAGCCCCCTGAGGCCCAAGCTGGAGAAACGGC...TGGGGCACTGGCAGGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATATT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR TCA 90 bp | CTTGAGCGCCAGGTCCCGGTCCGTGTGGGTCTAACAGGTACGGGGGAGGGGATCCAGGGGAAAGCCTGTTaGAGGAGGCAAGGAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LERQVPVRVGLTGTGEGIQGKAC*RRQGEA Trigger: AGCCTCTCCTTGCCTCCTTCAACAGGCTTTCCCCTG...GATCCCCTCCCCCGTACCTGTTAGACCCACACGGACCGGGACCTGGCGCTCAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205619.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGAGTGGGCGCTGACACGTTGGCCTGCCTTGCCTGTTCTTCAGGTGGTGTGACCAGAACCCCTGGCTaGGAAAGCCAGCGGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RRVGADTLACLACSSGGVTRTPG*ESQRPT Trigger: GGTGGGCCGCTGGCTTTCCCAGCCAGGGGTTCTGGT...CACACCACCTGAAGAACAGGCAAGGCAGGCCAACGTGTCAGCGCCCACTCTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR CCA 90 bp | GGGCCGGGTCCAGTACCCAACCTTCGCACGAGTGTGTTGCACGTTTACATGGGGTGGCACCAGAACCCCTaGCTGGGAAAGCCAGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGPVPNLRTSVLHVYMGWHQNP*LGKPAA Trigger: GGCCGCTGGCTTTCCCAGCCAGGGGTTCTGGTGCCA...CCCCATGTAAACGTGCAACACACTCGTGCGAAGGTTGGGTACTGGACCCGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGATGTAAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTGGCACCAGAACCCCTaGCTGGGAAAGCCAGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GWDVRAGPCHLPRGHCACWHQNP*LGKPAA Trigger: GGCCGCTGGCTTTCCCAGCCAGGGGTTCTGGTGCCA...ACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTTACATCCCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTGAGTTTGCTGGCACAGGAGGAGTGCTGTGAGGTGCCTGGCAGGTGGCACCACTGCCTGCATCGCTaGACATCTGCTGAGGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: GLSLLAQEECCEVPGRWHHCLHR*TSAEGR Trigger: CCGTCCCTCAGCAGATGTTCAGCGATGCAGGCAGTG...GTGCCACCTGCCAGGCACCTCACAGCACTCCTCCTGTGCCAGCAAACTCAAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR CCA 90 bp | GCGCCAGGTCCCGGTCCGTGTGGGTCTAACAGGTACGGGGGAGGGGATCTGGAAGCGTGTCAGACAACTTaGGTGTCCCCTCTGTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: APGPGPCGSNRYGGGDLEACQTT*VSPLSH Trigger: GTGAGACAGAGGGGACACCCAAGTTGTCTGACACGC...TTCCAGATCCCCTCCCCCGTACCTGTTAGACCCACACGGACCGGGACCTGGCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205619.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGTCTAACAGGTACGGGGGAGGGGATCTGGAAAGGTCAGCTTGCCAGAACCGCCGTTTCTCCAGCTTaGGCCTCAGGGGGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGLTGTGEGIWKGQLARTAVSPA*ASGGWA Trigger: AGCCCAGCCCCCTGAGGCCCAAGCTGGAGAAACGGC...GGTTCTGGCAAGCTGACCTTTCCAGATCCCCTCCCCCGTACCTGTTAGACCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000205619.2 |
||
| 3UTR CAA 72 bp | CGAGCTGCCCCCTGCAGCAGGGGCTTACCCTTTGGCTaGAGTGAACAGCAGCTGTCCATCACAGGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RAAPCSRGLPFG*SEQQLSITGPL Trigger: CAGAGGGCCTGTGATGGACAGCTGCTGTTCACTCAAGCCAAAGGGTAAGCCCCTGCTGCAGGGGGCAGCTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR TCA 90 bp | AGGAGAGTGGGCGCTGACACGTTGGCCTGCCTTGCCTGTTCTTCAGGTGGTGTGCACTGCCTGCATCGCTaGACATCTGCTGAGGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: RRVGADTLACLACSSGGVHCLHR*TSAEGR Trigger: CCGTCCCTCAGCAGATGTTCAGCGATGCAGGCAGTG...CACACCACCTGAAGAACAGGCAAGGCAGGCCAACGTGTCAGCGCCCACTCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR CCA 90 bp | GGGCCGGGTCCAGTACCCAACCTTCGCACGAGTGTGTTGCACGTTTACATGGGGGAGGCAAGGAGAGGCTaGAAGGGGATGGGACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPGPVPNLRTSVLHVYMGEARRG*KGMGHL Trigger: GAGGTGTCCCATCCCCTTCCAGCCTCTCCTTGCCTC...CCCCATGTAAACGTGCAACACACTCGTGCGAAGGTTGGGTACTGGACCCGGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050833.14 ENSMUST00000106343.3 |
||
| CDS-3UTR CCA 90 bp | GTCCGTGTGGGTCTAACAGGTACGGGGGAGGGGATCTGGAAAGGTCAGCTTGCCGAGGCAAGGAGAGGCTaGAAGGGGATGGGACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: VRVGLTGTGEGIWKGQLAEARRG*KGMGHL Trigger: GAGGTGTCCCATCCCCTTCCAGCCTCTCCTTGCCTC...GGCAAGCTGACCTTTCCAGATCCCCTCCCCCGTACCTGTTAGACCCACACGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205619.2 |
||
| CDS-3UTR CCA 90 bp | GAAGTGGGCTTGAGTTTGCTGGCACAGGAGGAGTGCTGTGAGGTGCCTGGCAGGGAGGCAAGGAGAGGCTaGAAGGGGATGGGACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: EVGLSLLAQEECCEVPGREARRG*KGMGHL Trigger: GAGGTGTCCCATCCCCTTCCAGCCTCTCCTTGCCTC...CCTGCCAGGCACCTCACAGCACTCCTCCTGTGCCAGCAAACTCAAGCCCACTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR TCA 90 bp | GAAGTGGGCTTGAGTTTGCTGGCACAGGAGGAGTGCTGTGAGGTGCCTGGCAGGCAGGGGAAAGCCTGTTaGAGGAGGCAAGGAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EVGLSLLAQEECCEVPGRQGKAC*RRQGEA Trigger: AGCCTCTCCTTGCCTCCTTCAACAGGCTTTCCCCTG...CCTGCCAGGCACCTCACAGCACTCCTCCTGTGCCAGCAAACTCAAGCCCACTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR TCA 90 bp | GGAGCCCGGGGAGAGGCCCAGAAACACTGGAATGACTGTCTACATCAGCCGGACCAGGGGAAAGCCTGTTaGAGGAGGCAAGGAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GARGEAQKHWNDCLHQPDQGKAC*RRQGEA Trigger: AGCCTCTCCTTGCCTCCTTCAACAGGCTTTCCCCTG...GTCCGGCTGATGTAGACAGTCATTCCAGTGTTTCTGGGCCTCTCCCCGGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050833.14 ENSMUST00000106343.3 |
||
| CDS-3UTR TCA 90 bp | GGCTTGAGTTTGCTGGCACAGGAGGAGTGCTGTGAGGTGCCTGGCAGGTGGCACTCGCTGAACATCTGCTaGGGGACGGTGCTCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: GLSLLAQEECCEVPGRWHSLNIC*GTVLRI Trigger: AATCCTGAGCACCGTCCCTCAGCAGATGTTCAGCGA...GTGCCACCTGCCAGGCACCTCACAGCACTCCTCCTGTGCCAGCAAACTCAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTGAGTGAACAGCAGCTGTCCATCACAGGCCCTCTGGGGCCGGGTCCAGTAGCGTGTCAGACAACTTaGGTGTCCCCTCTGTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLSEQQLSITGPLGPGPVACQTT*VSPLSH Trigger: GTGAGACAGAGGGGACACCCAAGTTGTCTGACACGC...TACTGGACCCGGCCCCAGAGGGCCTGTGATGGACAGCTGCTGTTCACTCAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR CCA 90 bp | AATGAATTCATTGGGGAGATCCGAGTGCCCCTCCGCCGCCTCAAGCCTTCACAGCAGCGAGCTCAGGTATaGGGAGGGGGCCCCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NEFIGEIRVPLRRLKPSQQRAQV*GGGPRS Trigger: ACTTCTGGGGCCCCCTCCCCATACCTGAGCTCGCTG...CTGTGAAGGCTTGAGGCGGCGGAGGGGCACTCGGATCTCCCCAATGAATTCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000205619.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTGCCGTTTCTCCAGCTTaGGCCTCAGGGGGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KGRTLPPSSGTLCMFTPFAVSPA*ASGGWA Trigger: AGCCCAGCCCCCTGAGGCCCAAGCTGGAGAAACGGC...AAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR TCA 90 bp | GGCTGGGATGTAAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTCGCTGAACATCTGCTaGGGGACGGTGCTCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: GWDVRAGPCHLPRGHCACSLNIC*GTVLRI Trigger: AATCCTGAGCACCGTCCCTCAGCAGATGTTCAGCGA...ACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTTACATCCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR TCA 90 bp | GGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTCACTGCCTGCATCGCTaGACATCTGCTGAGGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: GQDPATFLGDIVHVYAFSHCLHR*TSAEGR Trigger: CCGTCCCTCAGCAGATGTTCAGCGATGCAGGCAGTG...AGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGATGTAAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTGCGTGTCAGACAACTTaGGTGTCCCCTCTGTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GWDVRAGPCHLPRGHCACACQTT*VSPLSH Trigger: GTGAGACAGAGGGGACACCCAAGTTGTCTGACACGC...ACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTTACATCCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGATGTAAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTCTTCCTCTTAGGGGCTaGCGTGTCAGACAACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GWDVRAGPCHLPRGHCACLPLRG*RVRQLG Trigger: CCCAAGTTGTCTGACACGCCAGCCCCTAAGAGGAAG...ACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTTACATCCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCAGCGAGCTCAGGTATaGGGAGGGGGCCCCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KGRTLPPSSGTLCMFTPFQRAQV*GGGPRS Trigger: ACTTCTGGGGCCCCCTCCCCATACCTGAGCTCGCTG...AAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR TCA 90 bp | GAATTCATTGGGGAGATCCGAGTGCCCCTCCGCCGCCTCAAGCCTTCACAGAAGCATATCCTGTTACCTTaGGTTTCCGGGGTAGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EFIGEIRVPLRRLKPSQKHILLP*VSGVGG Trigger: CCCGCCTACCCCGGAAACTCAAGGTAACAGGATATG...CTTCTGTGAAGGCTTGAGGCGGCGGAGGGGCACTCGGATCTCCCCAATGAATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205619.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGTCTAACAGGTACGGGGGAGGGGATCTGGAAAGGTCAGCTTGCCAGAACCCTTCCTCTTAGGGGCTaGCGTGTCAGACAACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGLTGTGEGIWKGQLARTLPLRG*RVRQLG Trigger: CCCAAGTTGTCTGACACGCCAGCCCCTAAGAGGAAG...GGTTCTGGCAAGCTGACCTTTCCAGATCCCCTCCCCCGTACCTGTTAGACCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205619.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCACCAGAACCCCTGGCTaGGAAAGCCAGCGGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PSSGTLCMFTPFLIVSVATRTPG*ESQRPT Trigger: GGTGGGCCGCTGGCTTTCCCAGCCAGGGGTTCTGGT...GGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCCCGGGGAGAGGCCCAGAAACACTGGAATGACTGTCTACATCAGCCGGACGCTCAGGATTGTATGTaGAGGCATCTTGGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GARGEAQKHWNDCLHQPDAQDCM*RHLGRR Trigger: CCTCCTCCCAAGATGCCTCCACATACAATCCTGAGC...GTCCGGCTGATGTAGACAGTCATTCCAGTGTTTCTGGGCCTCTCCCCGGGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGATGTAAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTGCTCAGGATTGTATGTaGAGGCATCTTGGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GWDVRAGPCHLPRGHCACAQDCM*RHLGRR Trigger: CCTCCTCCCAAGATGCCTCCACATACAATCCTGAGC...ACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTTACATCCCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTGAGTTTGCTGGCACAGGAGGAGTGCTGTGAGGTGCCTGGCAGGTGGCACTTCAGCAATTTCCTTTaGGCCTTTCTGAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLSLLAQEECCEVPGRWHFSNFL*AFLSSS Trigger: GGAGGAGCTCAGAAAGGCGCAAAGGAAATTGCTGAA...GTGCCACCTGCCAGGCACCTCACAGCACTCCTCCTGTGCCAGCAAACTCAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR CCA 90 bp | TCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCGAAGCAGCCGTTTCTCCAGCTTaGGCCTCAGGGGGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SGTLCMFTPFLIVSVAEAAVSPA*ASGGWA Trigger: AGCCCAGCCCCCTGAGGCCCAAGCTGGAGAAACGGC...TGCTTCGGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR TCA 90 bp | AAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTTCGCTGAACATCTGCTaGGGGACGGTGCTCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: KGRTLPPSSGTLCMFTPFSLNIC*GTVLRI Trigger: AATCCTGAGCACCGTCCCTCAGCAGATGTTCAGCGA...AAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTTCCTTTGCGCCTTTCTaGGCTCCTCCTGGAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: KGRTLPPSSGTLCMFTPFSFAPF*APPGST Trigger: AGTGCTTCCAGGAGGAGCTCAGAAAGGCGCAAAGGA...AAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR CCA 90 bp | GGGGTCGGATTAGGGAAGATTAGAGGAGGACGTTTCCAAATAGAGGAAAGGACAACCAGAACCCCTGGCTaGGAAAGCCAGCGGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GVGLGKIRGGRFQIEERTTRTPG*ESQRPT Trigger: GGTGGGCCGCTGGCTTTCCCAGCCAGGGGTTCTGGT...TGTCCTTTCCTCTATTTGGAAACGTCCTCCTCTAATCTTCCCTAATCCGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR TCA 90 bp | CTGGGGACAGCGATGTGGTTAGGCCTCACAGAAAGCACCGCCTGCCTTTGTTCTGATCTAGAAGGAAACTaGGACAAGTGGGAAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGTAMWLGLTESTACLCSDLEGN*DKWEGG Trigger: CCCTCCTTCCCACTTGTCTCAGTTTCCTTCTAGATC...AGAACAAAGGCAGGCGGTGCTTTCTGTGAGGCCTAACCACATCGCTGTCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050833.14 |
||
| CDS-3UTR TCA 90 bp | TCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCGAACACTGCCTGCATCGCTaGACATCTGCTGAGGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGTLCMFTPFLIVSVAEHCLHR*TSAEGR Trigger: CCGTCCCTCAGCAGATGTTCAGCGATGCAGGCAGTG...TTCGGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR CCA 90 bp | AATAAAGTTGGGCTGGGGACAGCGATGTGGTTAGGCCTCACAGAAAGCACCGCCGCTCAGGATTGTATGTaGAGGCATCTTGGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKVGLGTAMWLGLTESTAAQDCM*RHLGRR Trigger: CCTCCTCCCAAGATGCCTCCACATACAATCCTGAGC...GGCGGTGCTTTCTGTGAGGCCTAACCACATCGCTGTCCCCAGCCCAACTTTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR CCA 90 bp | ACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCATCGAGCTCAGGTATaGGGAGGGGGCCCCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TFLGDIVHVYAFSDCVSGHRAQV*GGGPRS Trigger: ACTTCTGGGGCCCCCTCCCCATACCTGAGCTCGATG...GCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000206349.2 |
||
| CDS-3UTR TCA 90 bp | GTGTCAGTGGCCGAAGCATGGCAACTGGGCATCAATAAACATCTCTTGAGGAAGCAGGGGAAAGCCTGTTaGAGGAGGCAAGGAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSVAEAWQLGINKHLLRKQGKAC*RRQGEA Trigger: AGCCTCTCCTTGCCTCCTTCAACAGGCTTTCCCCTG...CTTCCTCAAGAGATGTTTATTGATGCCCAGTTGCCATGCTTCGGCCACTGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCCTTCCTCTTAGGGGCTaGCGTGTCAGACAACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSSGTLCMFTPFLIVSVALPLRG*RVRQLG Trigger: CCCAAGTTGTCTGACACGCCAGCCCCTAAGAGGAAG...GGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTTGTTCTCAGGAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTATGGCACCAGAACCCCTaGCTGGGAAAGCCAGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AFVLRNSSMRLNSPLWPLWHQNP*LGKPAA Trigger: GGCCGCTGGCTTTCCCAGCCAGGGGTTCTGGTGCCA...TAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTGAGAACAAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| 3UTR CAA 72 bp | TGTAAGGGCAGGACCCTGCCACCTTCCTCGGGGACATaGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CKGRTLPPSSGT*CMFTPFLIVSV Trigger: CACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCGAATCGCTGAACATCTGCTaGGGGACGGTGCTCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: SSGTLCMFTPFLIVSVAESLNIC*GTVLRI Trigger: AATCCTGAGCACCGTCCCTCAGCAGATGTTCAGCGA...TTCGGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCTCCTTTGCGCCTTTCTaGGCTCCTCCTGGAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TFLGDIVHVYAFSDCVSGSFAPF*APPGST Trigger: AGTGCTTCCAGGAGGAGCTCAGAAAGGCGCAAAGGA...GCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCTTCCTCTTAGGGGCTaGCGTGTCAGACAACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFLGDIVHVYAFSDCVSGLPLRG*RVRQLG Trigger: CCCAAGTTGTCTGACACGCCAGCCCCTAAGAGGAAG...GCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTGGAGAGCTATATTCACATATGCAAACTTCCTCCTGCCTGCCTTGCTGTTGAGGCAAGGAGAGGCTaGAAGGGGATGGGACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVESYIHICKLPPACLAVEARRG*KGMGHL Trigger: GAGGTGTCCCATCCCCTTCCAGCCTCTCCTTGCCTC...AACAGCAAGGCAGGCAGGAGGAAGTTTGCATATGTGAATATAGCTCTCCACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050833.14 ENSMUST00000106343.3 |
||
| CDS-3UTR CCA 90 bp | TGTTCTCAGGAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCCAGCGAGCTCAGGTATaGGGAGGGGGCCCCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CSQEFFYEIELSTLATKTQRAQV*GGGPRS Trigger: ACTTCTGGGGCCCCCTCCCCATACCTGAGCTCGCTG...GGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTGAGAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR CCA 90 bp | GCCTTTGTTCTCAGGAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTACAGCGAGCTCAGGTATaGGGAGGGGGCCCCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AFVLRNSSMRLNSPLWPLQRAQV*GGGPRS Trigger: ACTTCTGGGGCCCCCTCCCCATACCTGAGCTCGCTG...TAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTGAGAACAAAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR GCA 90 bp | AATAAAGTTGGGCTGGGGACAGCGATGTGGTTAGGCCTCACAGAAAGCACCGCCTCCACGTTCTCATACTaGAGAAGTCGATCTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKVGLGTAMWLGLTESTASTFSY*RSRSRR Trigger: CCTTCTAGATCGACTTCTGCAGTATGAGAACGTGGA...GGCGGTGCTTTCTGTGAGGCCTAACCACATCGCTGTCCCCAGCCCAACTTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050833.14 ENSMUST00000106343.3 |
||
| CDS-3UTR GCA 90 bp | GGGGTCGGATTAGGGAAGATTAGAGGAGGACGTTTCCAAATAGAGGAAAGGACAGTCATCCCCACTGCCTaGATCGCTGAACATCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVGLGKIRGGRFQIEERTVIPTA*IAEHLL Trigger: CAGCAGATGTTCAGCGATGCAGGCAGTGGGGATGAC...TGTCCTTTCCTCTATTTGGAAACGTCCTCCTCTAATCTTCCCTAATCCGACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR CCA 90 bp | GGGGTCGGATTAGGGAAGATTAGAGGAGGACGTTTCCAAATAGAGGAAAGGACAGCGTGTCAGACAACTTaGGTGTCCCCTCTGTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GVGLGKIRGGRFQIEERTACQTT*VSPLSH Trigger: GTGAGACAGAGGGGACACCCAAGTTGTCTGACACGC...TGTCCTTTCCTCTATTTGGAAACGTCCTCCTCTAATCTTCCCTAATCCGACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR CCA 90 bp | GCCTGCCTTTGTTCTCAGGAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCAAGCCTCTTAGGGGCTaGCGTGTCAGACAACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ACLCSQEFFYEIELSTLAKPLRG*RVRQLG Trigger: CCCAAGTTGTCTGACACGCCAGCCCCTAAGAGGCTT...GGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTGAGAACAAAGGCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106342.8 |
||
| 3UTR CAA 72 bp | CCGCCTGCCTTTGTTCTCAGGAATTCTTCTATGAGATaGAACTCTCCACTCTGGCCACTAAGACCCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPAFVLRNSSMR*NSPLWPLRPWR Trigger: CCTCCAGGGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTGAGAACAAAGGCAGGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR GCA 90 bp | GCTATATTCACATATGCAAACTTCCTCCTGCCTGCCTTGCTGTTACCTGCAAATGTCATCCCCACTGCCTaGATCGCTGAACATCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AIFTYANFLLPALLLPANVIPTA*IAEHLL Trigger: CAGCAGATGTTCAGCGATGCAGGCAGTGGGGATGAC...ATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGTTTGCATATGTGAATATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR GCA 90 bp | AGTAGAAATAAAGTTGGGCTGGGGACAGCGATGTGGTTAGGCCTCACAGAAAGCTTCAGCAATTTCCTTTaGGCCTTTCTGAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRNKVGLGTAMWLGLTESFSNFL*AFLSSS Trigger: GGAGGAGCTCAGAAAGGCGCAAAGGAAATTGCTGAA...GCTTTCTGTGAGGCCTAACCACATCGCTGTCCCCAGCCCAACTTTATTTCTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106343.3 |
||
| CDS-3UTR CCA 90 bp | GCCTTTGTTCTCAGGAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTAGCGTGTCAGACAACTTaGGTGTCCCCTCTGTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AFVLRNSSMRLNSPLWPLACQTT*VSPLSH Trigger: GTGAGACAGAGGGGACACCCAAGTTGTCTGACACGC...TAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTGAGAACAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR GCA 90 bp | GTGTCAGTGGCCGAAGCATGGCAACTGGGCATCAATAAACATCTCTTGAGGAAGTCCACGTTCTCATACTaGAGAAGTCGATCTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSVAEAWQLGINKHLLRKSTFSY*RSRSRR Trigger: CCTTCTAGATCGACTTCTGCAGTATGAGAACGTGGA...CTTCCTCAAGAGATGTTTATTGATGCCCAGTTGCCATGCTTCGGCCACTGACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCGATCCACGTTCTCATACTaGAGAAGTCGATCTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLGDIVHVYAFSDCVSGRSTFSY*RSRSRR Trigger: CCTTCTAGATCGACTTCTGCAGTATGAGAACGTGGA...TCGGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCTCAGGAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCGCTCAGGATTGTATGTaGAGGCATCTTGGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CSQEFFYEIELSTLATKTAQDCM*RHLGRR Trigger: CCTCCTCCCAAGATGCCTCCACATACAATCCTGAGC...GGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTGAGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS-3UTR CAA 90 bp | GCTGGGAAAGCCAGCGGCCCACCCACGGGGCAGTCAGGGGGTCCAACCGACATCGGCCGTTTCTCCAGCTaGGGCCTCAGGGGGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AGKASGPPTGQSGGPTDIGRFSS*GLRGLG Trigger: GCCCAGCCCCCTGAGGCCCAAGCTGGAGAAACGGCC...GATGTCGGTTGGACCCCCTGACTGCCCCGTGGGTGGGCCGCTGGCTTTCCCAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000206090.2 |
||
| CDS CCA 90 bp | CGCCCGCCCTCCTGGGGGAAGACCCGAAAGGAACGCTGCTTCCAGTaGCTTCGCGGTGAGCTGAGGTCACAGAGGAGCTGGACACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RPPSWGKTRKERCFQ*LRGELRSQRSWTQL Trigger: CAGCTGTGTCCAGCTCCTCTGTGACCTCAGCTCACCGCGAAGCCACTGGAAGCAGCGTTCCTTTCGGGTCTTCCCCCAGGAGGGCGGGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206968.2 |
||
| CDS-3UTR CAA 90 bp | CGTGTGGGTCTAACAGGTACGGGGGAGGGGATCTGGAAAGGTCAGCTTGCCAGAGGCCGTTTCTCCAGCTaGGGCCTCAGGGGGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RVGLTGTGEGIWKGQLARGRFSS*GLRGLG Trigger: GCCCAGCCCCCTGAGGCCCAAGCTGGAGAAACGGCC...TCTGGCAAGCTGACCTTTCCAGATCCCCTCCCCCGTACCTGTTAGACCCACACG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000205619.2 |
||
| CDS TCA 90 bp | CCGTCCAGGGCGTCATCCCCACTGCCTGCATCGCTGAACATCTGCTaGGGGACGGTGCTCAGGATTGTATGTGGAGGCATCTTGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PSRASSPLPASLNIC*GTVLRIVCGGILGG Trigger: TCCTCCCAAGATGCCTCCACATACAATCCTGAGCACCGTCCCTCAGCAGATGTTCAGCGATGCAGGCAGTGGGGATGACGCCCTGGACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS TCA 90 bp | GGTCGTCATCTCCGTCCAGGGCGTCATCCCCACTGCCTGCATCGCTaGACATCTGCTGAGGGACGGTGCTCAGGATTGTATGTGGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRHLRPGRHPHCLHR*TSAEGRCSGLYVEA Trigger: TGCCTCCACATACAATCCTGAGCACCGTCCCTCAGCAGATGTTCAGCGATGCAGGCAGTGGGGATGACGCCCTGGACGGAGATGACGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCCCGGGGAGAGGCCCAGAAACACTGGAATGACTGTCTACATCAGCCGGACGGCGTGTCAGACAACTaGGGTGTCCCCTCTGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GARGEAQKHWNDCLHQPDGVSDN*GVPSVS Trigger: TGAGACAGAGGGGACACCCAAGTTGTCTGACACGCC...GTCCGGCTGATGTAGACAGTCATTCCAGTGTTTCTGGGCCTCTCCCCGGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
||
| CDS TCA 90 bp | CTGGGGGAAGACCCGAAAGGAACGCTGCTTCCAGTGGCTTCGCGGTaGGCTGAGGTCACAGAGGAGCTGGACACAGCTGCTCAGGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LGEDPKGTLLPVASR*AEVTEELDTAAQEK Trigger: TTTTTCCTGAGCAGCTGTGTCCAGCTCCTCTGTGACCTCAGCTCACCGCGAAGCCACTGGAAGCAGCGTTCCTTTCGGGTCTTCCCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206968.2 |
||
| CDS GCA 90 bp | GATCACCAGGTCGTCATCTCCGTCCAGGGCGTCATCCCCACTGCCTaGATCGCTGAACATCTGCTGAGGGACGGTGCTCAGGATTGTATG | + |
|
Preference number: 5 (lower is better) Translates to: DHQVVISVQGVIPTA*IAEHLLRDGAQDCM Trigger: CATACAATCCTGAGCACCGTCCCTCAGCAGATGTTCAGCGATGCAGGCAGTGGGGATGACGCCCTGGACGGAGATGACGACCTGGTGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
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| CDS-3UTR CAA 90 bp | TTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCGAGGCCGTTTCTCCAGCTaGGGCCTCAGGGGGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: FLGDIVHVYAFSDCVSGRGRFSS*GLRGLG Trigger: GCCCAGCCCCCTGAGGCCCAAGCTGGAGAAACGGCC...TCGGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| CDS TCA 90 bp | GGAAGACCCGAAAGGAACGCTGCTTCCAGTGGCTTCGCGGTGAGCTaGGGTCACAGAGGAGCTGGACACAGCTGCTCAGGAAAAAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: GRPERNAASSGFAVS*GHRGAGHSCSGKSK Trigger: CTTGCTTTTTCCTGAGCAGCTGTGTCCAGCTCCTCTGTGACCTCAGCTCACCGCGAAGCCACTGGAAGCAGCGTTCCTTTCGGGTCTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206968.2 |
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| CDS TCA 90 bp | TGTATTTCTTTTTGTAGTCCACTTCGCCGTCCGCTGGTCCGTTCATaGCCCGCCAGGGAGAAACGCCCCGGAGTAGAGTCCCGCTACCCA | + |
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Preference number: 5 (lower is better) Translates to: CISFCSPLRRPLVRS*PAREKRPGVESRYP Trigger: TGGGTAGCGGGACTCTACTCCGGGGCGTTTCTCCCTGGCGGGTCATGAACGGACCAGCGGACGGCGAAGTGGACTACAAAAAGAAATACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206968.2 |
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| CDS CCA 90 bp | CGCTGCTTCCAGTGGCTTCGCGGTGAGCTGAGGTCACAGAGGAGCTaGACACAGCTGCTCAGGAAAAAGCAAGGTCGGCCAAAGTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: RCFQWLRGELRSQRS*TQLLRKKQGRPKFS Trigger: GGAAAACTTTGGCCGACCTTGCTTTTTCCTGAGCAGCTGTGTCCAGCTCCTCTGTGACCTCAGCTCACCGCGAAGCCACTGGAAGCAGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206968.2 |
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| CDS-3UTR CAA 90 bp | AATTCATTGGGGAGATCCGAGTGCCCCTCCGCCGCCTCAAGCCTTCACAGAAGAGGCGTGTCAGACAACTaGGGTGTCCCCTCTGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: NSLGRSECPSAASSLHRRGVSDN*GVPSVS Trigger: TGAGACAGAGGGGACACCCAAGTTGTCTGACACGCC...TCTTCTGTGAAGGCTTGAGGCGGCGGAGGGGCACTCGGATCTCCCCAATGAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205619.2 |
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| CDS-3UTR CAA 90 bp | GGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGGCGTGTCAGACAACTaGGGTGTCCCCTCTGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: GQDPATFLGDIVHVYAFSGVSDN*GVPSVS Trigger: TGAGACAGAGGGGACACCCAAGTTGTCTGACACGCC...AGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
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| CDS-3UTR CAA 90 bp | GGGGTCGGATTAGGGAAGATTAGAGGAGGACGTTTCCAAATAGAGGAAAGGACAGGCCGTTTCTCCAGCTaGGGCCTCAGGGGGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: GVGLGKIRGGRFQIEERTGRFSS*GLRGLG Trigger: GCCCAGCCCCCTGAGGCCCAAGCTGGAGAAACGGCC...TGTCCTTTCCTCTATTTGGAAACGTCCTCCTCTAATCTTCCCTAATCCGACCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| CDS-3UTR CAA 90 bp | GTGGGTCTAACAGGTACGGGGGAGGGGATCTGGAAAGGTCAGCTTGCCAGAACCGCATATCCTGTTACCTaGAGTTTCCGGGGTAGGCGG | + |
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Preference number: 5 (lower is better) Translates to: VGLTGTGEGIWKGQLARTAYPVT*SFRGRR Trigger: CCGCCTACCCCGGAAACTCAAGGTAACAGGATATGC...GGTTCTGGCAAGCTGACCTTTCCAGATCCCCTCCCCCGTACCTGTTAGACCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205619.2 |
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| CDS-3UTR CAA 90 bp | GGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGGACGGTGCTCAGGATaGTATGTGGAGGCATCTTGG | + |
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Preference number: 5 (lower is better) Translates to: GQDPATFLGDIVHVYAFSGRCSG*YVEASW Trigger: CCAAGATGCCTCCACATACAATCCTGAGCACCGTCC...AGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
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| CDS-3UTR CAA 90 bp | AAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTGGACGGTGCTCAGGATaGTATGTGGAGGCATCTTGG | + |
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Preference number: 5 (lower is better) Translates to: KGRTLPPSSGTLCMFTPFGRCSG*YVEASW Trigger: CCAAGATGCCTCCACATACAATCCTGAGCACCGTCC...AAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
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| CDS-3UTR CAA 90 bp | CCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCGGCGTGTCAGACAACTaGGGTGTCCCCTCTGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: PSSGTLCMFTPFLIVSVAGVSDN*GVPSVS Trigger: TGAGACAGAGGGGACACCCAAGTTGTCTGACACGCC...GGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
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| CDS-3UTR CAA 90 bp | TCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCGAAGGACGGTGCTCAGGATaGTATGTGGAGGCATCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SSGTLCMFTPFLIVSVAEGRCSG*YVEASW Trigger: CCAAGATGCCTCCACATACAATCCTGAGCACCGTCC...TTCGGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
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| CDS-3UTR CAA 90 bp | TCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCGAAGCACTTCAGCAATTTCCTTaGCGCCTTTCTGAGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: SGTLCMFTPFLIVSVAEALQQFP*RLSELL Trigger: GAGGAGCTCAGAAAGGCGCAAAGGAAATTGCTGAAG...TGCTTCGGCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106343.3 ENSMUST00000206349.2 |
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| CDS-3UTR CAA 90 bp | ACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCTTCAGCAATTTCCTTaGCGCCTTTCTGAGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: TFLGDIVHVYAFSDCVSGLQQFP*RLSELL Trigger: GAGGAGCTCAGAAAGGCGCAAAGGAAATTGCTGAAG...GCCACTGACACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106343.3 ENSMUST00000206349.2 |
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| CDS-3UTR CAA 90 bp | TATATTCACATATGCAAACTTCCTCCTGCCTGCCTTGCTGTTACCTGCAAATATGGCGTGTCAGACAACTaGGGTGTCCCCTCTGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: YIHICKLPPACLAVTCKYGVSDN*GVPSVS Trigger: TGAGACAGAGGGGACACCCAAGTTGTCTGACACGCC...ATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGTTTGCATATGTGAATATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| CDS-3UTR CAA 90 bp | TATATTCACATATGCAAACTTCCTCCTGCCTGCCTTGCTGTTACCTGCAAATATGGACGGTGCTCAGGATaGTATGTGGAGGCATCTTGG | + |
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Preference number: 5 (lower is better) Translates to: YIHICKLPPACLAVTCKYGRCSG*YVEASW Trigger: CCAAGATGCCTCCACATACAATCCTGAGCACCGTCC...ATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGTTTGCATATGTGAATATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 |
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| CDS GCA 72 bp | GTCGTCATCTCCGTCCAGGGCGTCATCCCCACTGCCTaGATCGCTGAACATCTGCTGAGGGACGGTGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: VVISVQGVIPTA*IAEHLLRDGAQ Trigger: CTGAGCACCGTCCCTCAGCAGATGTTCAGCGATGCAGGCAGTGGGGATGACGCCCTGGACGGAGATGACGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
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| CDS CCA 72 bp | TCCTGGGGGAAGACCCGAAAGGAACGCTGCTTCCAGTaGCTTCGCGGTGAGCTGAGGTCACAGAGGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SWGKTRKERCFQ*LRGELRSQRSW Trigger: CCAGCTCCTCTGTGACCTCAGCTCACCGCGAAGCCACTGGAAGCAGCGTTCCTTTCGGGTCTTCCCCCAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206968.2 |
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| CDS CAA 90 bp | CTACCCAAGTCCGCCCGGCCTCTCACACCTCCACTTCCGGAGACTTaGCAACGCCGTATGAAACGGACTACAACTCCCAGCGTCCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: LPKSARPLTPPLPET*QRRMKRTTTPSVLR Trigger: GCGGAGGACGCTGGGAGTTGTAGTCCGTTTCATACGGCGTTGCAAAGTCTCCGGAAGTGGAGGTGTGAGAGGCCGGGCGGACTTGGGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206968.2 |
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| CDS TCA 72 bp | GACCCGAAAGGAACGCTGCTTCCAGTGGCTTCGCGGTaGGCTGAGGTCACAGAGGAGCTGGACACAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: DPKGTLLPVASR*AEVTEELDTAA Trigger: AGCAGCTGTGTCCAGCTCCTCTGTGACCTCAGCTCACCGCGAAGCCACTGGAAGCAGCGTTCCTTTCGGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206968.2 |
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| CDS TCA 72 bp | TTTTGTAGTCCACTTCGCCGTCCGCTGGTCCGTTCATaGCCCGCCAGGGAGAAACGCCCCGGAGTAGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: FCSPLRRPLVRS*PAREKRPGVES Trigger: GGACTCTACTCCGGGGCGTTTCTCCCTGGCGGGTCATGAACGGACCAGCGGACGGCGAAGTGGACTACAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206968.2 |
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| CDS TCA 72 bp | CTCCGTCCAGGGCGTCATCCCCACTGCCTGCATCGCTaGACATCTGCTGAGGGACGGTGCTCAGGATTGTAT | + |
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Preference number: 6 (lower is better) Translates to: LRPGRHPHCLHR*TSAEGRCSGLY Trigger: ATACAATCCTGAGCACCGTCCCTCAGCAGATGTTCAGCGATGCAGGCAGTGGGGATGACGCCCTGGACGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
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| CDS TCA 72 bp | GAAAGGAACGCTGCTTCCAGTGGCTTCGCGGTGAGCTaGGGTCACAGAGGAGCTGGACACAGCTGCTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: ERNAASSGFAVS*GHRGAGHSCSG Trigger: TCCTGAGCAGCTGTGTCCAGCTCCTCTGTGACCTCAGCTCACCGCGAAGCCACTGGAAGCAGCGTTCCTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206968.2 |
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| CDS CCA 72 bp | CAGTGGCTTCGCGGTGAGCTGAGGTCACAGAGGAGCTaGACACAGCTGCTCAGGAAAAAGCAAGGTCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: QWLRGELRSQRS*TQLLRKKQGRP Trigger: TGGCCGACCTTGCTTTTTCCTGAGCAGCTGTGTCCAGCTCCTCTGTGACCTCAGCTCACCGCGAAGCCACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206968.2 |
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| CDS CAA 72 bp | TCCGCCCGGCCTCTCACACCTCCACTTCCGGAGACTTaGCAACGCCGTATGAAACGGACTACAACTCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SARPLTPPLPET*QRRMKRTTTPS Trigger: GCTGGGAGTTGTAGTCCGTTTCATACGGCGTTGCAAAGTCTCCGGAAGTGGAGGTGTGAGAGGCCGGGCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206968.2 |
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| CDS TCA 72 bp | GCGTCATCCCCACTGCCTGCATCGCTGAACATCTGCTaGGGGACGGTGCTCAGGATTGTATGTGGAGGCATC | + |
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Preference number: 6 (lower is better) Translates to: ASSPLPASLNIC*GTVLRIVCGGI Trigger: GATGCCTCCACATACAATCCTGAGCACCGTCCCTCAGCAGATGTTCAGCGATGCAGGCAGTGGGGATGACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050833.14 ENSMUST00000106342.8 ENSMUST00000106343.3 ENSMUST00000206349.2 |
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| CDS CCA 72 bp | CCTGTATTTCTTTTTGTAGTCCACTTCGCCGTCCGCTaGTCCGTTCATGACCCGCCAGGGAGAAACGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: PVFLFVVHFAVR*SVHDPPGRNAP Trigger: CGGGGCGTTTCTCCCTGGCGGGTCATGAACGGACCAGCGGACGGCGAAGTGGACTACAAAAAGAAATACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206968.2 |
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| CDS GCA 72 bp | TCTGAATCAGAGGAGTCTTCATCCACGTTCTCATACTaGAGAAGTCGATCTAGAAGGAAACTCTTGTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SESEESSSTFSY*RSRSRRKLLSR Trigger: CCGAGACAAGAGTTTCCTTCTAGATCGACTTCTGCAGTATGAGAACGTGGATGAAGACTCCTCTGATTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106343.3 ENSMUST00000205349.2 ENSMUST00000206349.2 ENSMUST00000206968.2 |
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| CDS GCA 72 bp | TCTGAATCAGAGGAGTCTTCATCCACGTTCTCATACTaGAGAAGTCGATCTAGAAGGAAACTGAGACAAGTG | + |
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Preference number: 6 (lower is better) Translates to: SESEESSSTFSY*RSRSRRKLRQV Trigger: CACTTGTCTCAGTTTCCTTCTAGATCGACTTCTGCAGTATGAGAACGTGGATGAAGACTCCTCTGATTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050833.14 |
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