Pregenerated sensors for INKA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048458Ensembl transcript IDs: ENSMUST00000066610.8, ENSMUST00000098273.3
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCAGGCGGCTTGCCTCTAATTGCAGTTGTCACACCCCATCAAGCTaGGCTAGGTCTGCCGGAGGGGGTGAGGGAGGAGCTAAGGCACCC | + |
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Preference number: 1 (lower is better) Translates to: SRRLASNCSCHTPSS*ARSAGGGEGGAKAP Trigger: GGGTGCCTTAGCTCCTCCCTCACCCCCTCCGGCAGACCTAGCTCAGCTTGATGGGGTGTGACAACTGCAATTAGAGGCAAGCCGCCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR CCA 90 bp | GTTGAGTGTGCCACCCTTCAGGAGTCAGGGTGTGGGGTTTTCACATaGTCCTTCTTCACACACATCACAGCGGCCATCAGAGGGAGCTAC | + |
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Preference number: 1 (lower is better) Translates to: VECATLQESGCGVFT*SFFTHITAAIRGSY Trigger: GTAGCTCCCTCTGATGGCCGCTGTGATGTGTGTGAAGAAGGACCATGTGAAAACCCCACACCCTGACTCCTGAAGGGTGGCACACTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR GCA 90 bp | GCCCTGTTTTGTCTCCTGGCAGCCGAGTGTGTTCTCAGAGCTTGCTaGTTTATGAAATACCATGCTGGTTGGGCACGCCTACTTGGACTC | + |
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Preference number: 1 (lower is better) Translates to: ALFCLLAAECVLRAC*FMKYHAGWARLLGL Trigger: GAGTCCAAGTAGGCGTGCCCAACCAGCATGGTATTTCATAAAGCAGCAAGCTCTGAGAACACACTCGGCTGCCAGGAGACAAAACAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR GCA 90 bp | CCTGCCCTGTTTTGTCTCCTGGCAGCCGAGTGTGTTCTCAGAGCTTaGTGCTTTATGAAATACCATGCTGGTTGGGCACGCCTACTTGGA | + |
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Preference number: 1 (lower is better) Translates to: PALFCLLAAECVLRA*CFMKYHAGWARLLG Trigger: TCCAAGTAGGCGTGCCCAACCAGCATGGTATTTCATAAAGCAGCAAGCTCTGAGAACACACTCGGCTGCCAGGAGACAAAACAGGGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR TCA 90 bp | CTCAGCCTGACCTGTGACAGACAGCCTCTCTCCACTTGGTTCTACTaGGGCCTGACTGAGAACTCTTTCTTTCTTTCTGAGGATGGGAAC | + |
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Preference number: 1 (lower is better) Translates to: LSLTCDRQPLSTWFY*GLTENSFFLSEDGN Trigger: GTTCCCATCCTCAGAAAGAAAGAAAGAGTTCTCAGTCAGGCCTCAGTAGAACCAAGTGGAGAGAGGCTGTCTGTCACAGGTCAGGCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR TCA 90 bp | TGGCTTCCTATGCCATCAAAGTCCATGTCCTCTTGGATCATCTGTTaGGTGTGCCACCCTTCAGGAGTCAGGGTGTGGGGTTTTCACATG | + |
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Preference number: 1 (lower is better) Translates to: WLPMPSKSMSSWIIC*VCHPSGVRVWGFHM Trigger: CATGTGAAAACCCCACACCCTGACTCCTGAAGGGTGGCACACTCAACAGATGATCCAAGAGGACATGGACTTTGATGGCATAGGAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACCTGCTTGTTCTaGGTCCCCAGTACCCAGCTATGGGCTAAAATCTTGGTCCTAGTA | + |
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Preference number: 1 (lower is better) Translates to: HTHTHTHTHTHTCLF*VPSTQLWAKILVLV Trigger: TACTAGGACCAAGATTTTAGCCCATAGCTGGGTACTGGGGACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR CCA 90 bp | GTAGTAGGTGGAGCTGAGCCAAGTGTCTGTTCCTCGGGATTAGTTTaGGTTAGAGATCACCCTGAGGGTAGGCTACAGAAGAGCATAGAG | + |
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Preference number: 1 (lower is better) Translates to: VVGGAEPSVCSSGLV*VRDHPEGRLQKSIE Trigger: CTCTATGCTCTTCTGTAGCCTACCCTCAGGGTGATCTCTAACCCAAACTAATCCCGAGGAACAGACACTTGGCTCAGCTCCACCTACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR GCA 90 bp | TCTAAATATATGGGTATTATTTCTAGGTTCACCCCAACCATCTGCTaGCCTGCAGGAGCATTATGGCAGGCAACAGGGGTCAGGATGGGC | + |
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Preference number: 1 (lower is better) Translates to: SKYMGIISRFTPTIC*PAGALWQATGVRMG Trigger: GCCCATCCTGACCCCTGTTGCCTGCCATAATGCTCCTGCAGGGCAGCAGATGGTTGGGGTGAACCTAGAAATAATACCCATATATTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR TCA 90 bp | CTTCTATTACAGTGCCCAGACAAGCAAGGAGTCTGTCATGTTAGTTaGTTTAATGGCTGTAAAAGTGGCTGCTGGGGTTTGAACTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: LLLQCPDKQGVCHVS*FNGCKSGCWGLNLG Trigger: TCCCAAGTTCAAACCCCAGCAGCCACTTTTACAGCCATTAAATCAACTAACATGACAGACTCCTTGCTTGTCTGGGCACTGTAATAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR-3UTR TCA 90 bp | TTATGGCAGGCAACAGGGGTCAGGATGGGCTCTCACTGCTGGACCAGGCCGTGTGGACTCAGCTCAGCCTaGCCTGTGACAGACAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LWQATGVRMGSHCWTRPCGLSSA*PVTDSL Trigger: GAGGCTGTCTGTCACAGGTCAGGCTGAGCTGAGTCC...ACACGGCCTGGTCCAGCAGTGAGAGCCCATCCTGACCCCTGTTGCCTGCCATAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR-3UTR CCA 90 bp | TTATGGCAGGCAACAGGGGTCAGGATGGGCTCTCACTGCTGGACCAGGCCGTGTGTAACACAGGCTTCCTaGACTCCTCTCCTGCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LWQATGVRMGSHCWTRPCVTQAS*TPLLPL Trigger: GAGAGGCAGGAGAGGAGTCCAGGAAGCCTGTGTTAC...ACACGGCCTGGTCCAGCAGTGAGAGCCCATCCTGACCCCTGTTGCCTGCCATAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR-3UTR TCA 90 bp | CACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTCCGCTCAGCCTGACCTGTaGCAGACAGCCTCTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTHTHTHTPACSGSAQPDL*QTASLH Trigger: GTGGAGAGAGGCTGTCTGTCACAGGTCAGGCTGAGC...GGACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGCCTCTCCCAATTATTGTCACATCCAGCCTCAAAGAACACCACCACCACCAGGACTCAGCTCAGCCTaGCCTGTGACAGACAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: PASPNYCHIQPQRTPPPPGLSSA*PVTDSL Trigger: GAGGCTGTCTGTCACAGGTCAGGCTGAGCTGAGTCC...TGGTGGTGGTGGTGTTCTTTGAGGCTGGATGTGACAATAATTGGGAGAGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTTTGAGCAGCTTGATGGGGGCAACGTGCATGCCAGGACCCTTTGACCCCGGGCCCTCACCAGTCTaGATTTTAGGTTCAGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: SFLSSLMGATCMPGPFDPGPSPV*ILGSVS Trigger: GCTCACTGAACCTAAAATGCAGACTGGTGAGGGCCC...GGGGTCAAAGGGTCCTGGCATGCACGTTGCCCCCATCAAGCTGCTCAAAAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR-3UTR GCA 90 bp | CACCCCAACCATCTGCTGCCCTGCAGGAGCATTATGGCAGGCAACAGGGGTCAGCTGAGGATGGGAACTTaGATCTGGTCTGAAGACCAT | + |
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Preference number: 2 (lower is better) Translates to: HPNHLLPCRSIMAGNRGQLRMGT*IWSEDH Trigger: ATGGTCTTCAGACCAGATGCAAGTTCCCATCCTCAG...CTGACCCCTGTTGCCTGCCATAATGCTCCTGCAGGGCAGCAGATGGTTGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR-3UTR TCA 90 bp | TCAAATGAGGTCTTGGGAAGTAGTGGAGGAGTAACACAGGCTTCCTGGACTCCTGCTCAGCCTGACCTGTaGCAGACAGCCTCTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SNEVLGSSGGVTQASWTPAQPDL*QTASLH Trigger: GTGGAGAGAGGCTGTCTGTCACAGGTCAGGCTGAGC...AGGAGTCCAGGAAGCCTGTGTTACTCCTCCACTACTTCCCAAGACCTCATTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR-3UTR GCA 90 bp | GCGGGTCCCCTGTTGACTTCCAGGTTGATGAGGATAGATGTGTCCAGCTCACCGCCTGGACTCCTCTCCTaGCTCTCCCAATTATTGTCA | + |
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Preference number: 2 (lower is better) Translates to: AGPLLTSRLMRIDVSSSPPGLLS*LSQLLS Trigger: TGACAATAATTGGGAGAGGCAGGAGAGGAGTCCAGG...CGGTGAGCTGGACACATCTATCCTCATCAACCTGGAAGTCAACAGGGGACCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR-3UTR GCA 90 bp | GGATTAGCGTTCTCCACCACTGGTGTGTTGTGCTGTGTGCCTGACAGCATTCCTACCATGAGATCGGCCTaGCCTGTTTTGTCTCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: GLAFSTTGVLCCVPDSIPTMRSA*PVLSPG Trigger: GCCAGGAGACAAAACAGGGCAGGCCGATCTCATGGT...AGGAATGCTGTCAGGCACACAGCACAACACACCAGTGGTGGAGAACGCTAATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR-3UTR TCA 90 bp | AATGCTCTGGGGGCAGCAGGCGGCTTGCCTCTAATTGCAGTTGTCACACCCCATCCAACCCTTTACAAATaGAAACCCCTTGCCTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: NALGAAGGLPLIAVVTPHPTLYK*KPLACS Trigger: GCTACAGGCAAGGGGTTTTCATTTGTAAAGGGTTGG...ATGGGGTGTGACAACTGCAATTAGAGGCAAGCCGCCTGCTGCCCCCAGAGCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTAACACAGGCTTCCTaGACTCCTCTCCTGCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTHTHTHTHTCLFWVTQAS*TPLLPL Trigger: GAGAGGCAGGAGAGGAGTCCAGGAAGCCTGTGTTAC...CCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR-3UTR CCA 90 bp | GTGTTGTGCTGTGTGCCTGACAGCATTCCTGCTTCACACAAGAGCAGAGGAGCTGGTGAGGAGGTGACCTaGCTTCCTATGCCATCAAAG | + |
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Preference number: 2 (lower is better) Translates to: VLCCVPDSIPASHKSRGAGEEVT*LPMPSK Trigger: CTTTGATGGCATAGGAAGCCAGGTCACCTCCTCACC...AGCTCCTCTGCTCTTGTGTGAAGCAGGAATGCTGTCAGGCACACAGCACAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR CAA 90 bp | ATAAGCCTGATGCCCACAGATTTGAGCTGGGAACTGCTTTCCTTTTaGAGCAGCTTGATGGGGGCAACGTGCATGCCAGGACCCTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: ISLMPTDLSWELLSF*SSLMGATCMPGPFD Trigger: GTCAAAGGGTCCTGGCATGCACGTTGCCCCCATCAAGCTGCTCAAAAAGGAAAGCAGTTCCCAGCTCAAATCTGTGGGCATCAGGCTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCCTCTCCCAATTATTGTCACATCCAGCCTCAAAGAACACCACCACCACCAGGGCCCTCACCAGTCTaGATTTTAGGTTCAGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: PASPNYCHIQPQRTPPPPGPSPV*ILGSVS Trigger: GCTCACTGAACCTAAAATGCAGACTGGTGAGGGCCC...TGGTGGTGGTGGTGTTCTTTGAGGCTGGATGTGACAATAATTGGGAGAGGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR-3UTR GCA 90 bp | AATGCTCTGGGGGCAGCAGGCGGCTTGCCTCTAATTGCAGTTGTCACACCCCATCTTTATGAAATACCATaGTGGTTGGGCACGCCTACT | + |
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Preference number: 2 (lower is better) Translates to: NALGAAGGLPLIAVVTPHLYEIP*WLGTPT Trigger: AGTAGGCGTGCCCAACCAGCATGGTATTTCATAAAG...ATGGGGTGTGACAACTGCAATTAGAGGCAAGCCGCCTGCTGCCCCCAGAGCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR CAA 90 bp | TTTCTTCTCCAATTTGCTCTTAATGCTCTGGGGGCAGCAGGCGGCTaGCCTCTAATTGCAGTTGTCACACCCCATCAAGCTGAGCTAGGT | + |
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Preference number: 2 (lower is better) Translates to: FLLQFALNALGAAGG*PLIAVVTPHQAELG Trigger: ACCTAGCTCAGCTTGATGGGGTGTGACAACTGCAATTAGAGGCAAGCCGCCTGCTGCCCCCAGAGCATTAAGAGCAAATTGGAGAAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR CAA 90 bp | CTGGCTTCCTATGCCATCAAAGTCCATGTCCTCTTGGATCATCTGTaGAGTGTGCCACCCTTCAGGAGTCAGGGTGTGGGGTTTTCACAT | + |
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Preference number: 2 (lower is better) Translates to: LASYAIKVHVLLDHL*SVPPFRSQGVGFSH Trigger: ATGTGAAAACCCCACACCCTGACTCCTGAAGGGTGGCACACTCAACAGATGATCCAAGAGGACATGGACTTTGATGGCATAGGAAGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGCCTCTCCCAATTATTGTCACATCCAGCCTCAAAGAACACCACCACCACCATCCACTTGGTTCTACTaGGGCCTGACTGAGAACTCT | + |
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Preference number: 2 (lower is better) Translates to: PASPNYCHIQPQRTPPPPSTWFY*GLTENS Trigger: AGAGTTCTCAGTCAGGCCTCAGTAGAACCAAGTGGA...TGGTGGTGGTGGTGTTCTTTGAGGCTGGATGTGACAATAATTGGGAGAGGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR-3UTR TCA 90 bp | CACACACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGTCCACTTGGTTCTACTaGGGCCTGACTGAGAACTCT | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTHTHTHTHTCLFWSTWFY*GLTENS Trigger: AGAGTTCTCAGTCAGGCCTCAGTAGAACCAAGTGGA...CCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR-3UTR TCA 90 bp | ACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTCCCCCAACCCTTTACAAATaGAAACCCCTTGCCTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTHTHTHLLVLGPPTLYK*KPLACS Trigger: GCTACAGGCAAGGGGTTTTCATTTGTAAAGGGTTGG...GGGACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR-3UTR GCA 90 bp | CACCCCAACCATCTGCTGCCCTGCAGGAGCATTATGGCAGGCAACAGGGGTCAGTGTGTTCTCAGAGCTTaGTGCTTTATGAAATACCAT | + |
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Preference number: 2 (lower is better) Translates to: HPNHLLPCRSIMAGNRGQCVLRA*CFMKYH Trigger: ATGGTATTTCATAAAGCAGCAAGCTCTGAGAACACA...CTGACCCCTGTTGCCTGCCATAATGCTCCTGCAGGGCAGCAGATGGTTGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR CAA 90 bp | TGTGGAATTTGTGTGTTGGGATTAGCGTTCTCCACCACTGGTGTGTaGTGCTGTGTGCCTGACAGCATTCCTGCTTCACACAAGAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: CGICVLGLAFSTTGV*CCVPDSIPASHKSR Trigger: TCTGCTCTTGTGTGAAGCAGGAATGCTGTCAGGCACACAGCACAACACACCAGTGGTGGAGAACGCTAATCCCAACACACAAATTCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAACTTGAGAAAGAAAGTGCCCTCTTCTATGGAGATTCTGGGAACAGGTGAGGAGACAGTGCCTGCGTaGAAGCACGTTGCTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GNLRKKVPSSMEILGTGEETVPA*KHVASP Trigger: AGGAGAAGCAACGTGCTTTCACGCAGGCACTGTCTC...CTCACCTGTTCCCAGAATCTCCATAGAAGAGGGCACTTTCTTTCTCAAGTTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR-3UTR CCA 90 bp | GGATTAGCGTTCTCCACCACTGGTGTGTTGTGCTGTGTGCCTGACAGCATTCCTGAGACTGGTCTTTATTaGAAGTTCCTCTGGGAAACC | + |
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Preference number: 2 (lower is better) Translates to: GLAFSTTGVLCCVPDSIPETGLY*KFLWET Trigger: GGTTTCCCAGAGGAACTTCCAATAAAGACCAGTCTC...AGGAATGCTGTCAGGCACACAGCACAACACACCAGTGGTGGAGAACGCTAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR CAA 90 bp | CTAGTTGTTTTGTATTGGTCCCCTGACTCTGTTCACTGCATTTCTTaGTGTGCCTTGGTAGATGTGGAGGCCAGCAGCTGGTTCCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: LVVLYWSPDSVHCIS*CALVDVEASSWFLS Trigger: GGAAAGGAACCAGCTGCTGGCCTCCACATCTACCAAGGCACACAAAGAAATGCAGTGAACAGAGTCAGGGGACCAATACAAAACAACTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR-3UTR TCA 90 bp | ACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTCCCCTCTTTCTTTCTTTCTaGGGATGGGAACTTGCATCT | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTHTHTHLLVLGPLFLSF*GWELAS Trigger: AGATGCAAGTTCCCATCCTCAGAAAGAAAGAAAGAG...GGGACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR-3UTR TCA 90 bp | ACACACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGCTACTGAGGCCTGACTaGGAACTCTTTCTTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTHTHTHTPACSGLLRPD*ELFLSF Trigger: GAAAGAAAGAAAGAGTTCTCAGTCAGGCCTCAGTAG...CCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR-3UTR GCA 90 bp | CCCAATTATTGTCACATCCAGCCTCAAAGAACACCACCACCACCACCACCATCACTGAGGATGGGAACTTaGATCTGGTCTGAAGACCAT | + |
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Preference number: 2 (lower is better) Translates to: PNYCHIQPQRTPPPPPPSLRMGT*IWSEDH Trigger: ATGGTCTTCAGACCAGATGCAAGTTCCCATCCTCAG...TGATGGTGGTGGTGGTGGTGGTGTTCTTTGAGGCTGGATGTGACAATAATTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR-3UTR CCA 90 bp | CCCAATTATTGTCACATCCAGCCTCAAAGAACACCACCACCACCACCACCATCAATGGGAACTTGCATCTaGTCTGAAGACCATGCCATC | + |
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Preference number: 2 (lower is better) Translates to: PNYCHIQPQRTPPPPPPSMGTCI*SEDHAI Trigger: GATGGCATGGTCTTCAGACCAGATGCAAGTTCCCAT...TGATGGTGGTGGTGGTGGTGGTGTTCTTTGAGGCTGGATGTGACAATAATTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR-3UTR CCA 90 bp | TGGGGTTTGAACTTGGGACCTTTGGAACCACAGTCAGTACTCTTAACCACTGAGTTCTCCTCTGCTCTTTaGAGACCTAGGGCTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: WGLNLGPLEPQSVLLTTEFSSAL*RPRASQ Trigger: CTGAGAAGCCCTAGGTCTCCAAAGAGCAGAGGAGAA...CTCAGTGGTTAAGAGTACTGACTGTGGTTCCAAAGGTCCCAAGTTCAAACCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR CAA 90 bp | CTCTCAGTCCCTTGGGAGTCTAGACTGCAGGCAGAAGAGCTTCTCTaGTTATTTTTCTTCTCCAATTTGCTCTTAATGCTCTGGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LSVPWESRLQAEELL*LFFFSNLLLMLWGQ Trigger: CTGCCCCCAGAGCATTAAGAGCAAATTGGAGAAGAAAAATAACAAGAGAAGCTCTTCTGCCTGCAGTCTAGACTCCCAAGGGACTGAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR-3UTR TCA 90 bp | CACACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTCTCTTTCTTTCTTTCTaGGGATGGGAACTTGCATCT | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTHTHTHTHLLVLGLFLSF*GWELAS Trigger: AGATGCAAGTTCCCATCCTCAGAAAGAAAGAAAGAG...ACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR-3UTR CCA 90 bp | TATTCTCAGCTTTGTCCATGGTTAGGCAGGAGACCCGAGGATAGTGCCATTTCTATGGGAACTTGCATCTaGTCTGAAGACCATGCCATC | + |
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Preference number: 2 (lower is better) Translates to: YSQLCPWLGRRPEDSAISMGTCI*SEDHAI Trigger: GATGGCATGGTCTTCAGACCAGATGCAAGTTCCCAT...AGAAATGGCACTATCCTCGGGTCTCCTGCCTAACCATGGACAAAGCTGAGAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR-3UTR CCA 90 bp | GGTAACTTGAGAAAGAAAGTGCCCTCTTCTATGGAGATTCTGGGAACAGGTGAGGAGATGGATTCCTTATaGACCCAGGCTTGCATGCCT | + |
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Preference number: 2 (lower is better) Translates to: GNLRKKVPSSMEILGTGEEMDSL*TQACMP Trigger: AGGCATGCAAGCCTGGGTCCATAAGGAATCCATCTC...CTCACCTGTTCCCAGAATCTCCATAGAAGAGGGCACTTTCTTTCTCAAGTTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR-3UTR CCA 90 bp | GGTAACTTGAGAAAGAAAGTGCCCTCTTCTATGGAGATTCTGGGAACAGGTGAGTCAACGGAGACAGGATaGACAAGGACATGCTTGACC | + |
|
Preference number: 2 (lower is better) Translates to: GNLRKKVPSSMEILGTGESTETG*TRTCLT Trigger: GGTCAAGCATGTCCTTGTCCATCCTGTCTCCGTTGA...CTCACCTGTTCCCAGAATCTCCATAGAAGAGGGCACTTTCTTTCTCAAGTTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR-3UTR TCA 90 bp | GGATTAGCGTTCTCCACCACTGGTGTGTTGTGCTGTGTGCCTGACAGCATTCCTAAAGGCAAAGGTGCCTaGCACATATGTATTATCTTA | + |
|
Preference number: 2 (lower is better) Translates to: GLAFSTTGVLCCVPDSIPKGKGA*HICIIL Trigger: TAAGATAATACATATGTGTCAGGCACCTTTGCCTTT...AGGAATGCTGTCAGGCACACAGCACAACACACCAGTGGTGGAGAACGCTAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGGGTTTGAACTTGGGACCTTTGGAACCACAGTCAGTACTCTTAACCACTGAGCCCACAGATTTGAGCTaGGAACTGCTTTCCTTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: WGLNLGPLEPQSVLLTTEPTDLS*ELLSFL Trigger: CAAAAAGGAAAGCAGTTCCCAGCTCAAATCTGTGGG...CTCAGTGGTTAAGAGTACTGACTGTGGTTCCAAAGGTCCCAAGTTCAAACCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGCAGAATTTAGCTGTCAATTTCTCTCTGCCTATTATCACCATCTCTTCCCATCTTGATGGGAACTTGTaGGCAACCCTTCCCAATCTT | + |
|
Preference number: 2 (lower is better) Translates to: GQNLAVNFSLPIITISSHLDGNL*ATLPNL Trigger: AAGATTGGGAAGGGTTGCCCACAAGTTCCCATCAAG...ATGGGAAGAGATGGTGATAATAGGCAGAGAGAAATTGACAGCTAAATTCTGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR-3UTR TCA 90 bp | TATTCTCAGCTTTGTCCATGGTTAGGCAGGAGACCCGAGGATAGTGCCATTTCTAGGAAGGGTATTAAATaGGCTTCCAGCTTATTTACT | + |
|
Preference number: 2 (lower is better) Translates to: YSQLCPWLGRRPEDSAISRKGIK*ASSLFT Trigger: AGTAAATAAGCTGGAAGCTCATTTAATACCCTTCCT...AGAAATGGCACTATCCTCGGGTCTCCTGCCTAACCATGGACAAAGCTGAGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR-3UTR GCA 90 bp | TATTCTCAGCTTTGTCCATGGTTAGGCAGGAGACCCGAGGATAGTGCCATTTCTTGTGTTCTCAGAGCTTaGTGCTTTATGAAATACCAT | + |
|
Preference number: 2 (lower is better) Translates to: YSQLCPWLGRRPEDSAISCVLRA*CFMKYH Trigger: ATGGTATTTCATAAAGCAGCAAGCTCTGAGAACACA...AGAAATGGCACTATCCTCGGGTCTCCTGCCTAACCATGGACAAAGCTGAGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCTCTATGCCAGGAAGGGTATTAAATGAGCTTCCAGCTTATTTACTTGTCCTATTATGGACCCAGGCTTaGATGCCTGCTCACTATATA | + |
|
Preference number: 2 (lower is better) Translates to: ASMPGRVLNELPAYLLVLLWTQA*MPAHYI Trigger: TATATAGTGAGCAGGCATGCAAGCCTGGGTCCATAA...TAGGACAAGTAAATAAGCTGGAAGCTCATTTAATACCCTTCCTGGCATAGAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR CAA 90 bp | TGTGGAGCAAATGTAGACAGTTTGCCAGGTAGCATGAATGTAAGATaGGAAGTCAATTACAAACTGATTCAATCCCAGCTTTGTACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: CGANVDSLPGSMNVR*EVNYKLIQSQLCTV Trigger: CACAGTACAAAGCTGGGATTGAATCAGTTTGTAATTGACTTCCAATCTTACATTCATGCTACCTGGCAAACTGTCTACATTTGCTCCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR CAA 90 bp | ACACATATGTATTATCTTAGATGCACAAATTACTTCCTAGTTGTTTaGTATTGGTCCCCTGACTCTGTTCACTGCATTTCTTTGTGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: THMYYLRCTNYFLVV*YWSPDSVHCISLCA Trigger: GGCACACAAAGAAATGCAGTGAACAGAGTCAGGGGACCAATACAAAACAACTAGGAAGTAATTTGTGCATCTAAGATAATACATATGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCCCAACCATCTGCTGCCCTGCAGGAGCATTATGGCAGGCAACAGGGGTCAGTCGGCCTGCCCTGTTTaGTCTCCTGGCAGCCGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HPNHLLPCRSIMAGNRGQSACPV*SPGSRV Trigger: CACTCGGCTGCCAGGAGACAAAACAGGGCAGGCCGA...CTGACCCCTGTTGCCTGCCATAATGCTCCTGCAGGGCAGCAGATGGTTGGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR CCA 72 bp | TTCACCCCAACCATCTGCTGCCCTGCAGGAGCATTATaGCAGGCAACAGGGGTCAGGATGGGCTCTCACTGC | + |
|
Preference number: 3 (lower is better) Translates to: FTPTICCPAGAL*QATGVRMGSHC Trigger: GCAGTGAGAGCCCATCCTGACCCCTGTTGCCTGCCATAATGCTCCTGCAGGGCAGCAGATGGTTGGGGTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTGTGCTGTGTGCCTGACAGCATTCCTGCTTCACACAAGAGCAGAGGAGCTTCGGCCTGCCCTGTTTaGTCTCCTGGCAGCCGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VLCCVPDSIPASHKSRGASACPV*SPGSRV Trigger: CACTCGGCTGCCAGGAGACAAAACAGGGCAGGCCGA...AGCTCCTCTGCTCTTGTGTGAAGCAGGAATGCTGTCAGGCACACAGCACAACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR TCA 72 bp | CTTGCCTCTAATTGCAGTTGTCACACCCCATCAAGCTaGGCTAGGTCTGCCGGAGGGGGTGAGGGAGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LASNCSCHTPSS*ARSAGGGEGGA Trigger: AGCTCCTCCCTCACCCCCTCCGGCAGACCTAGCTCAGCTTGATGGGGTGTGACAACTGCAATTAGAGGCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR GCA 72 bp | TTATGGCAGGCAACAGGGGTCAGGATGGGCTCTCACTaGTGGACCAGGCCGTGTGTGACTCTAGGGTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: LWQATGVRMGSH*WTRPCVTLGSI Trigger: AATGGACCCTAGAGTCACACACGGCCTGGTCCAGCAGTGAGAGCCCATCCTGACCCCTGTTGCCTGCCATAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR GCA 72 bp | TGGACCCAGGCTTGCATGCCTGCTCACTATATAAAGTaGCTGGCATCAACCCCACCCTGCGGGTCCCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: WTQACMPAHYIK*LASTPPCGSPV Trigger: AACAGGGGACCCGCAGGGTGGGGTTGATGCCAGGCACTTTATATAGTGAGCAGGCATGCAAGCCTGGGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR CCA 72 bp | TGGCAGGCAACAGGGGTCAGGATGGGCTCTCACTGCTaGACCAGGCCGTGTGTGACTCTAGGGTCCATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: WQATGVRMGSHC*TRPCVTLGSIY Trigger: ATAAATGGACCCTAGAGTCACACACGGCCTGGTCCAGCAGTGAGAGCCCATCCTGACCCCTGTTGCCTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR CCA 72 bp | CTTTGTTCTCTCCTGGCTAAGGGGTGGGGGCTGAGATaGATTCCTTATGGACCCAGGCTTGCATGCCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LCSLLAKGWGLR*IPYGPRLACLL Trigger: GAGCAGGCATGCAAGCCTGGGTCCATAAGGAATCCATCTCAGCCCCCACCCCTTAGCCAGGAGAGAACAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR CCA 72 bp | GCCTGCGTGAAAGCACGTTGCTTCTCCTCTGCTCTTTaGAGACCTAGGGCTTCTCAGGCTTCCTCAACACAC | + |
|
Preference number: 3 (lower is better) Translates to: ACVKARCFSSAL*RPRASQASSTH Trigger: GTGTGTTGAGGAAGCCTGAGAAGCCCTAGGTCTCCAAAGAGCAGAGGAGAAGCAACGTGCTTTCACGCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR CCA 72 bp | GCCACCCTTCAGGAGTCAGGGTGTGGGGTTTTCACATaGTCCTTCTTCACACACATCACAGCGGCCATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ATLQESGCGVFT*SFFTHITAAIR Trigger: TCTGATGGCCGCTGTGATGTGTGTGAAGAAGGACCATGTGAAAACCCCACACCCTGACTCCTGAAGGGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTCCCACAGCCTCTCTCCACTaGGTTCTACTGAGGCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: THTHTHTHTHTHLLVLGPTASLH*VLLRPD Trigger: GTCAGGCCTCAGTAGAACCAAGTGGAGAGAGGCTGT...GGGACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR-3UTR CAA 90 bp | AACCATCTGCTGCCCTGCAGGAGCATTATGGCAGGCAACAGGGGTCAGGATGGGTGCCTCTCCCAATTATaGTCACATCCAGCCTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NHLLPCRSIMAGNRGQDGCLSQL*SHPASK Trigger: CTTTGAGGCTGGATGTGACAATAATTGGGAGAGGCA...CCCATCCTGACCCCTGTTGCCTGCCATAATGCTCCTGCAGGGCAGCAGATGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR TCA 72 bp | TGGCAGCCGAGTGTGTTCTCAGAGCTTGCTGCTTTATaGAATACCATGCTGGTTGGGCACGCCTACTTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: WQPSVFSELAAL*NTMLVGHAYLD Trigger: GTCCAAGTAGGCGTGCCCAACCAGCATGGTATTTCATAAAGCAGCAAGCTCTGAGAACACACTCGGCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR TCA 72 bp | ATGCCATCAAAGTCCATGTCCTCTTGGATCATCTGTTaGGTGTGCCACCCTTCAGGAGTCAGGGTGTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: MPSKSMSSWIIC*VCHPSGVRVWG Trigger: ACCCCACACCCTGACTCCTGAAGGGTGGCACACTCAACAGATGATCCAAGAGGACATGGACTTTGATGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR GCA 72 bp | TGTCTCCTGGCAGCCGAGTGTGTTCTCAGAGCTTGCTaGTTTATGAAATACCATGCTGGTTGGGCACGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: CLLAAECVLRAC*FMKYHAGWARL Trigger: TAGGCGTGCCCAACCAGCATGGTATTTCATAAAGCAGCAAGCTCTGAGAACACACTCGGCTGCCAGGAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR GCA 72 bp | GTGGGGGCTGAGATGGATTCCTTATGGACCCAGGCTTaGATGCCTGCTCACTATATAAAGTGCCTGGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: VGAEMDSLWTQA*MPAHYIKCLAS Trigger: TGATGCCAGGCACTTTATATAGTGAGCAGGCATGCAAGCCTGGGTCCATAAGGAATCCATCTCAGCCCCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR GCA 72 bp | GTGTTGGGATTAGCGTTCTCCACCACTGGTGTGTTGTaGTGTGTGCCTGACAGCATTCCTGCTTCACACAAG | + |
|
Preference number: 3 (lower is better) Translates to: VLGLAFSTTGVL*CVPDSIPASHK Trigger: CTTGTGTGAAGCAGGAATGCTGTCAGGCACACAGCACAACACACCAGTGGTGGAGAACGCTAATCCCAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR CCA 72 bp | CCAAGAGAGTTGTCCATGGATGGTGAGGAGGTGACCTaGCTTCCTATGCCATCAAAGTCCATGTCCTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PRELSMDGEEVT*LPMPSKSMSSW Trigger: CCAAGAGGACATGGACTTTGATGGCATAGGAAGCCAGGTCACCTCCTCACCATCCATGGACAACTCTCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR CCA 72 bp | GGAGCTGAGCCAAGTGTCTGTTCCTCGGGATTAGTTTaGGTTAGAGATCACCCTGAGGGTAGGCTACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GAEPSVCSSGLV*VRDHPEGRLQK Trigger: CTTCTGTAGCCTACCCTCAGGGTGATCTCTAACCCAAACTAATCCCGAGGAACAGACACTTGGCTCAGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR CCA 72 bp | GGAAGCTGCAGACAGGCCCCAGTTCCACAGACAGGCTaGACTCATGATTTTATCCTGCAGAGAATGTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GSCRQAPVPQTG*THDFILQRMLG Trigger: CCCTAACATTCTCTGCAGGATAAAATCATGAGTCCAGCCTGTCTGTGGAACTGGGGCCTGTCTGCAGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR TCA 72 bp | ACAAGCCAAGAGAGTTGTCCATGGATGGTGAGGAGGTaGCCTGGCTTCCTATGCCATCAAAGTCCATGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TSQESCPWMVRR*PGFLCHQSPCP Trigger: AGGACATGGACTTTGATGGCATAGGAAGCCAGGTCACCTCCTCACCATCCATGGACAACTCTCTTGGCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR CCA 72 bp | ACTCTTTCTTTCTTTCTGAGGATGGGAACTTGCATCTaGTCTGAAGACCATGCCATCTGCCCTCCCTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TLSFFLRMGTCI*SEDHAICPPSP Trigger: GGGAGAGGGAGGGCAGATGGCATGGTCTTCAGACCAGATGCAAGTTCCCATCCTCAGAAAGAAAGAAAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR CCA 72 bp | GTCTTGGGAAGTAGTGGAGGAGTAACACAGGCTTCCTaGACTCCTCTCCTGCCTCTCCCAATTATTGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: VLGSSGGVTQAS*TPLLPLPIIVT Trigger: TGTGACAATAATTGGGAGAGGCAGGAGAGGAGTCCAGGAAGCCTGTGTTACTCCTCCACTACTTCCCAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR CCA 72 bp | ACACACACACACACACACACACACACCTGCTTGTTCTaGGTCCCCAGTACCCAGCTATGGGCTAAAATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: THTHTHTHTCLF*VPSTQLWAKIL Trigger: CAAGATTTTAGCCCATAGCTGGGTACTGGGGACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR CCA 72 bp | TATAACCATGAGATCGGCCTGCCCTGTTTTGTCTCCTaGCAGCCGAGTGTGTTCTCAGAGCTTGCTGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: YNHEIGLPCFVS*QPSVFSELAAL Trigger: TAAAGCAGCAAGCTCTGAGAACACACTCGGCTGCCAGGAGACAAAACAGGGCAGGCCGATCTCATGGTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTCCCTATGGGCTAAAATCTaGGTCCTAGTAAGGTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HTHTHTHTHTHTPACSGSLWAKI*VLVRSV Trigger: CACAGACCTTACTAGGACCAAGATTTTAGCCCATAG...GGACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR TCA 72 bp | GATGTGGAGGCCAGCAGCTGGTTCCTTTCCTATCATTaGGTTCTCACCTTCTATTACAGTGCCCAGACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: DVEASSWFLSYH*VLTFYYSAQTS Trigger: GCTTGTCTGGGCACTGTAATAGAAGGTGAGAACTCAATGATAGGAAAGGAACCAGCTGCTGGCCTCCACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR GCA 72 bp | CTGAGAACTCTTTCTTTCTTTCTGAGGATGGGAACTTaGATCTGGTCTGAAGACCATGCCATCTGCCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LRTLSFFLRMGT*IWSEDHAICPP Trigger: GGGAGGGCAGATGGCATGGTCTTCAGACCAGATGCAAGTTCCCATCCTCAGAAAGAAAGAAAGAGTTCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR CCA 72 bp | TCCTTCACCAGAGACAGAAGTTCAACGGAGACAGGATaGACAAGGACATGCTTGACCAGAAAGAGTGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SFTRDRSSTETG*TRTCLTRKSEL Trigger: GAGCTCACTCTTTCTGGTCAAGCATGTCCTTGTCCATCCTGTCTCCGTTGAACTTCTGTCTCTGGTGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTAACTTGAGAAAGAAAGTGCCCTCTTCTATGGAGATTCTGGGAACAGGTGAGCTGCGTGAAAGCACGTaGCTTCTCCTCTGCTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GNLRKKVPSSMEILGTGELREST*LLLCSL Trigger: CAAAGAGCAGAGGAGAAGCAACGTGCTTTCACGCAG...CTCACCTGTTCCCAGAATCTCCATAGAAGAGGGCACTTTCTTTCTCAAGTTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR GCA 72 bp | CTCCCTTCCTCCTCTCAGTCCCTTGGGAGTCTAGACTaGAGGCAGAAGAGCTTCTCTTGTTATTTTTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LPSSSQSLGSLD*RQKSFSCYFSS Trigger: AGAAGAAAAATAACAAGAGAAGCTCTTCTGCCTGCAGTCTAGACTCCCAAGGGACTGAGAGGAGGAAGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR CCA 72 bp | TGTAGCAGTGCCTTGTCAGGAAGCAGACCATTAAAATaGTTGCGGGTCCCTGAGACTGGTCTTTATTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: CSSALSGSRPLK*LRVPETGLYWK Trigger: CTTCCAATAAAGACCAGTCTCAGGGACCCGCAACCATTTTAATGGTCTGCTTCCTGACAAGGCACTGCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCTATGCCAGGAAGGGTATTAAATGAGCTTCCAGCTTATTTACTTGTCCTAACAGCCTCTCTCCACTaGGTTCTACTGAGGCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: ASMPGRVLNELPAYLLVLTASLH*VLLRPD Trigger: GTCAGGCCTCAGTAGAACCAAGTGGAGAGAGGCTGT...TAGGACAAGTAAATAAGCTGGAAGCTCATTTAATACCCTTCCTGGCATAGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATTTCTAGGTTCACCCCAACCATCTGCTGCCCTGCAGGAGCATTATGGCAGGGTGTGTTCTCAGAGCTaGCTGCTTTATGAAATACCA | + |
|
Preference number: 3 (lower is better) Translates to: LFLGSPQPSAALQEHYGRVCSQS*LLYEIP Trigger: TGGTATTTCATAAAGCAGCAAGCTCTGAGAACACAC...CCTGCCATAATGCTCCTGCAGGGCAGCAGATGGTTGGGGTGAACCTAGAAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR-3UTR CAA 90 bp | GGTAACTTGAGAAAGAAAGTGCCCTCTTCTATGGAGATTCTGGGAACAGGTGAGGAACTGCTTTCCTTTTaGAGCAGCTTGATGGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GNLRKKVPSSMEILGTGEELLSF*SSLMGA Trigger: TGCCCCCATCAAGCTGCTCAAAAAGGAAAGCAGTTC...CTCACCTGTTCCCAGAATCTCCATAGAAGAGGGCACTTTCTTTCTCAAGTTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR TCA 72 bp | GTCCTAGTAAGGTCTGTGATACCAACCCTTTACAAATaGAAACCCCTTGCCTGTAGCAGTGCCTTGTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VLVRSVIPTLYK*KPLACSSALSG Trigger: TCCTGACAAGGCACTGCTACAGGCAAGGGGTTTTCATTTGTAAAGGGTTGGTATCACAGACCTTACTAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR TCA 72 bp | ACTGCCAGAGCATTTCTATGCACCTCTTCACTTCAGTaGCACACTCTCCATTACTGTCTCAGCAAGAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TARAFLCTSSLQ*HTLHYCLSKSQ Trigger: TTGGCTCTTGCTGAGACAGTAATGGAGAGTGTGTCACTGAAGTGAAGAGGTGCATAGAAATGCTCTGGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR GCA 72 bp | CTAGTTGTTTTGTATTGGTCCCCTGACTCTGTTCACTaGATTTCTTTGTGTGCCTTGGTAGATGTGGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LVVLYWSPDSVH*ISLCALVDVEA Trigger: GGCCTCCACATCTACCAAGGCACACAAAGAAATGCAGTGAACAGAGTCAGGGGACCAATACAAAACAACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTAACTTGAGAAAGAAAGTGCCCTCTTCTATGGAGATTCTGGGAACAGGTGAGGTTCACTGCATTTCTTaGTGTGCCTTGGTAGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: GNLRKKVPSSMEILGTGEVHCIS*CALVDV Trigger: CACATCTACCAAGGCACACAAAGAAATGCAGTGAAC...CTCACCTGTTCCCAGAATCTCCATAGAAGAGGGCACTTTCTTTCTCAAGTTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR TCA 72 bp | GTTGATTTAATGGCTGTAAAAGTGGCTGCTGGGGTTTaGACTTGGGACCTTTGGAACCACAGTCAGTACTCT | + |
|
Preference number: 3 (lower is better) Translates to: VDLMAVKVAAGV*TWDLWNHSQYS Trigger: AGAGTACTGACTGTGGTTCCAAAGGTCCCAAGTTCAAACCCCAGCAGCCACTTTTACAGCCATTAAATCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTCTCAGCTTTGTCCATGGTTAGGCAGGAGACCCGAGGATAGTGCCATTTCTTTGTACTGTGTGACCTaGAAAGAGTTAACTTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: YSQLCPWLGRRPEDSAISLYCVT*KELTSL Trigger: CAGAGAAGTTAACTCTTTCAAGGTCACACAGTACAA...AGAAATGGCACTATCCTCGGGTCTCCTGCCTAACCATGGACAAAGCTGAGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTAACTTGAGAAAGAAAGTGCCCTCTTCTATGGAGATTCTGGGAACAGGTGAGAGACAAATGTTATTCTaGATCTGGCTGTGGAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GNLRKKVPSSMEILGTGERQMLF*IWLWSK Trigger: TTTGCTCCACAGCCAGATCAAGAATAACATTTGTCT...CTCACCTGTTCCCAGAATCTCCATAGAAGAGGGCACTTTCTTTCTCAAGTTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR TCA 72 bp | ACATGCTCAGGTTCACACAGTGAAAAGCCTAGGTCTTaGTTCCTGTCTATTCAACTCCAGATCAGGAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: TCSGSHSEKPRS*FLSIQLQIRNS Trigger: TGAATTCCTGATCTGGAGTTGAATAGACAGGAATCAAGACCTAGGCTTTTCACTGTGTGAACCTGAGCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGCAGAATTTAGCTGTCAATTTCTCTCTGCCTATTATCACCATCTCTTCCCATCATCTCTCATTTAACTaGATGGGAACTTGTGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GQNLAVNFSLPIITISSHHLSFN*MGTCGQ Trigger: TTGCCCACAAGTTCCCATCAAGTTAAATGAGAGATG...ATGGGAAGAGATGGTGATAATAGGCAGAGAGAAATTGACAGCTAAATTCTGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR CCA 72 bp | CACATGTTAGTTGATTTAAATGATGTGAACTATGACTaGTCCACAAGCCAAGAGAGTTGTCCATGGATGGTG | + |
|
Preference number: 3 (lower is better) Translates to: HMLVDLNDVNYD*STSQESCPWMV Trigger: CACCATCCATGGACAACTCTCTTGGCTTGTGGACCAGTCATAGTTCACATCATTTAAATCAACTAACATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGAGCATTATGGCAGGCAACAGGGGTCAGGATGGGCTCTCACTGCTGGACCAGGGTTCTAAGGCCTTaGGGCTGCTTGTGGCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGALWQATGVRMGSHCWTRVLRP*GCLWRG Trigger: CCCCCGCCACAAGCAGCCCCAAGGCCTTAGAACCCT...GGTCCAGCAGTGAGAGCCCATCCTGACCCCTGTTGCCTGCCATAATGCTCCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR TCA 90 bp | CACCCCAACCATCTGCTGCCCTGCAGGAGCATTATGGCAGGCAACAGGGGTCAGCTCAGGCTGTTCCTGTaGGCTCTCAGGGCAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HPNHLLPCRSIMAGNRGQLRLFL*ALRAAE Trigger: TTCAGCTGCCCTGAGAGCTCACAGGAACAGCCTGAG...CTGACCCCTGTTGCCTGCCATAATGCTCCTGCAGGGCAGCAGATGGTTGGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR TCA 90 bp | TTATGGCAGGCAACAGGGGTCAGGATGGGCTCTCACTGCTGGACCAGGCCGTGTAGGAGCTTCAGTTCCTaGAGTGCGCCCATCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWQATGVRMGSHCWTRPCRSFSS*SAPIMQ Trigger: CTGCATGATGGGCGCACTTCAGGAACTGAAGCTCCT...ACACGGCCTGGTCCAGCAGTGAGAGCCCATCCTGACCCCTGTTGCCTGCCATAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR GCA 90 bp | AACCATCTGCTGCCCTGCAGGAGCATTATGGCAGGCAACAGGGGTCAGGATGGGGAGGCTGCCGATTTCTaGCCCGTGACATCAACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NHLLPCRSIMAGNRGQDGEAADF*PVTSTW Trigger: CCACGTTGATGTCACGGGGCAGAAATCGGCAGCCTC...CCCATCCTGACCCCTGTTGCCTGCCATAATGCTCCTGCAGGGCAGCAGATGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CCA 90 bp | CACCCCAACCATCTGCTGCCCTGCAGGAGCATTATGGCAGGCAACAGGGGTCAGCAAAAGATGGTTGGCTaGAGGAGGTCCAGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HPNHLLPCRSIMAGNRGQQKMVG*RRSRQQ Trigger: CTGCTGCCTGGACCTCCTCCAGCCAACCATCTTTTG...CTGACCCCTGTTGCCTGCCATAATGCTCCTGCAGGGCAGCAGATGGTTGGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR TCA 90 bp | ATCGGCCTGCCCTGTTTTGTCTCCTGGCAGCCGAGTGTGTTCTCAGAGCTTGCTCCGATTTCTGCCCCGTaGCATCAACGTGGAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IGLPCFVSWQPSVFSELAPISAP*HQRGGP Trigger: TGGACCTCCACGTTGATGTCACGGGGCAGAAATCGG...AGCAAGCTCTGAGAACACACTCGGCTGCCAGGAGACAAAACAGGGCAGGCCGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR GCA 90 bp | GCGGGTCCCCTGTTGACTTCCAGGTTGATGAGGATAGATGTGTCCAGCTCACCGGAGGCTGCCGATTTCTaGCCCGTGACATCAACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGPLLTSRLMRIDVSSSPEAADF*PVTSTW Trigger: CCACGTTGATGTCACGGGGCAGAAATCGGCAGCCTC...CGGTGAGCTGGACACATCTATCCTCATCAACCTGGAAGTCAACAGGGGACCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR CAA 72 bp | AGTGCCTGGCATCAACCCCACCCTGCGGGTCCCCTGTaGACTTCCAGGTTGATGAGGATAGATGTGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAWHQPHPAGPL*TSRLMRIDVSS Trigger: GCTGGACACATCTATCCTCATCAACCTGGAAGTCAACAGGGGACCCGCAGGGTGGGGTTGATGCCAGGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS-3UTR GCA 90 bp | TTATGGCAGGCAACAGGGGTCAGGATGGGCTCTCACTGCTGGACCAGGCCGTGTGAAGTGCGCCCATCATaGAGTTCATCTGATCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LWQATGVRMGSHCWTRPCEVRPS*SSSDPA Trigger: TGCAGGATCAGATGAACTGCATGATGGGCGCACTTC...ACACGGCCTGGTCCAGCAGTGAGAGCCCATCCTGACCCCTGTTGCCTGCCATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTCCGGAGGTCCAGTCATCTaGCTCCACCCACTCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTPACSGSGGPVI*LHPLCP Trigger: GGGACAGAGTGGGTGGAGCCAGATGACTGGACCTCC...GGACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTTGAGCAGCTTGATGGGGGCAACGTGCATGCCAGGACCCTTTGACCCCGTGACTCAGAGACCATaGGAGTCATCCAGCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFLSSLMGATCMPGPFDPVTQRP*ESSSQA Trigger: AGCCTGGCTGGATGACTCCCATGGTCTCTGAGTCAC...GGGGTCAAAGGGTCCTGGCATGCACGTTGCCCCCATCAAGCTGCTCAAAAAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS-3UTR TCA 90 bp | CCTTCCTCCTCTCAGTCCCTTGGGAGTCTAGACTGCAGGCAGAAGAGCTTCTCTGAAAGGGAACCGTCCTaGGCCCTTAGAAAGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSSSQSLGSLDCRQKSFSEREPS*ALRKAP Trigger: AGGAGCCTTTCTAAGGGCTCAGGACGGTTCCCTTTC...AGAGAAGCTCTTCTGCCTGCAGTCTAGACTCCCAAGGGACTGAGAGGAGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGCCCAACACCAGAGGCTaGCGATTTCTGCCCCGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHTPACSGPNTRG*RFLPRD Trigger: GTCACGGGGCAGAAATCGGCAGCCTCTGGTGTTGGG...CCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTCCTGCTCCTCCGGCAGCTaGGTTTTAGGAAGGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTPACSGSCSSGS*VLGRTA Trigger: GGCTGTCCTTCCTAAAACCCAGCTGCCGGAGGAGCA...GGACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTCTCAGTCCCTTGGGAGTCTAGACTGCAGGCAGAAGAGCTTCTCTTGTCACTCTGTCCCCTGTTaGGTACAGCTCTGGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSQSLGSLDCRQKSFSCHSVPC*VQLWCS Trigger: GGAGCACCAGAGCTGTACCCAACAGGGGACAGAGTG...ACAAGAGAAGCTCTTCTGCCTGCAGTCTAGACTCCCAAGGGACTGAGAGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS-3UTR CCA 90 bp | CACCCCAACCATCTGCTGCCCTGCAGGAGCATTATGGCAGGCAACAGGGGTCAGGGGTTTCAATATGTCTaGGCTCTCCTGTGCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPNHLLPCRSIMAGNRGQGFQYV*ALLCLR Trigger: TCTCAAGCACAGGAGAGCCCAGACATATTGAAACCC...CTGACCCCTGTTGCCTGCCATAATGCTCCTGCAGGGCAGCAGATGGTTGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CCA 90 bp | TTATGGCAGGCAACAGGGGTCAGGATGGGCTCTCACTGCTGGACCAGGCCGTGTGGGTTTCAATATGTCTaGGCTCTCCTGTGCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LWQATGVRMGSHCWTRPCGFQYV*ALLCLR Trigger: TCTCAAGCACAGGAGAGCCCAGACATATTGAAACCC...ACACGGCCTGGTCCAGCAGTGAGAGCCCATCCTGACCCCTGTTGCCTGCCATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CCA 90 bp | AGAGGGAGCTACCGTTATCTTCCTTCACCAGAGACAGAAGTTCAACGGAGACAGAGGGTTCTAAGGCCTTaGGGCTGCTTGTGGCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGSYRYLPSPETEVQRRQRVLRP*GCLWRG Trigger: CCCCCGCCACAAGCAGCCCCAAGGCCTTAGAACCCT...CTGTCTCCGTTGAACTTCTGTCTCTGGTGAAGGAAGATAACGGTAGCTCCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGCCGATTTCTGCCCCGTaGCATCAACGTGGAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHTPACSGPISAP*HQRGGP Trigger: TGGACCTCCACGTTGATGTCACGGGGCAGAAATCGG...CCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR GCA 90 bp | AACCATCTGCTGCCCTGCAGGAGCATTATGGCAGGCAACAGGGGTCAGGATGGGCTTCAGTTCCTGAAGTaGGCCCATCATGCAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NHLLPCRSIMAGNRGQDGLQFLK*AHHAVH Trigger: ATGAACTGCATGATGGGCGCACTTCAGGAACTGAAG...CCCATCCTGACCCCTGTTGCCTGCCATAATGCTCCTGCAGGGCAGCAGATGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR GCA 90 bp | TGGTCTTTATTGGAAGTTCCTCTGGGAAACCTGAGGGCTCAATGCCCCTTTCCACCCAACACCAGAGGCTaGCGATTTCTGCCCCGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: WSLLEVPLGNLRAQCPFPPNTRG*RFLPRD Trigger: GTCACGGGGCAGAAATCGGCAGCCTCTGGTGTTGGG...TGGAAAGGGGCATTGAGCCCTCAGGTTTCCCAGAGGAACTTCCAATAAAGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CCA 90 bp | TTATTTCTAGGTTCACCCCAACCATCTGCTGCCCTGCAGGAGCATTATGGCAGGTGCTCCTCCGGCAGCTaGGTTTTAGGAAGGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFLGSPQPSAALQEHYGRCSSGS*VLGRTA Trigger: GGCTGTCCTTCCTAAAACCCAGCTGCCGGAGGAGCA...CCTGCCATAATGCTCCTGCAGGGCAGCAGATGGTTGGGGTGAACCTAGAAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CCA 90 bp | AGTGTCTGTTCCTCGGGATTAGTTTGGGTTAGAGATCACCCTGAGGGTAGGCTAGGAGGTCCAGTCATCTaGCTCCACCCACTCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SVCSSGLVWVRDHPEGRLGGPVI*LHPLCP Trigger: GGGACAGAGTGGGTGGAGCCAGATGACTGGACCTCC...TAGCCTACCCTCAGGGTGATCTCTAACCCAAACTAATCCCGAGGAACAGACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTCCCCCCGTGACATCAACGTaGAGGTCCAGTCATCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHLLVLGPPVTST*RSSHLA Trigger: AGCCAGATGACTGGACCTCCACGTTGATGTCACGGG...GGGACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTCCCCCTCCTTTGGGTTCAATaGATCCCCCAGTCTCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTCLFWVPLLWVQ*IPQSHP Trigger: AGGGTGAGACTGGGGGATCCATTGAACCCAAAGGAG...GGGGACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CCA 90 bp | ATCGGCCTGCCCTGTTTTGTCTCCTGGCAGCCGAGTGTGTTCTCAGAGCTTGCTTACGACCCAGCTCTCTaGACTGGCCTTTTTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IGLPCFVSWQPSVFSELAYDPAL*TGLFLL Trigger: AAGGAGAAAAAGGCCAGTCCAGAGAGCTGGGTCGTA...AGCAAGCTCTGAGAACACACTCGGCTGCCAGGAGACAAAACAGGGCAGGCCGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTAGGAGCTTCAGTTCCTaGAGTGCGCCCATCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTHLLVLGRSFSS*SAPIMQ Trigger: CTGCATGATGGGCGCACTTCAGGAACTGAAGCTCCT...ACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR TCA 90 bp | TATTCTCAGCTTTGTCCATGGTTAGGCAGGAGACCCGAGGATAGTGCCATTTCTCGAGCGTCCTGCTCGTaGCTCAGAGACCATGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YSQLCPWLGRRPEDSAISRASCS*LRDHGS Trigger: ACTCCCATGGTCTCTGAGTCACGAGCAGGACGCTCG...AGAAATGGCACTATCCTCGGGTCTCCTGCCTAACCATGGACAAAGCTGAGAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS-3UTR TCA 90 bp | TTATTGGAAGTTCCTCTGGGAAACCTGAGGGCTCAATGCCCCTTTCCATATAGGCGAGCGTCCTGCTCGTaGCTCAGAGACCATGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLEVPLGNLRAQCPFPYRRASCS*LRDHGS Trigger: ACTCCCATGGTCTCTGAGTCACGAGCAGGACGCTCG...CCTATATGGAAAGGGGCATTGAGCCCTCAGGTTTCCCAGAGGAACTTCCAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGCAAAAGATGGTTGGCTaGAGGAGGTCCAGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHTPACSGQKMVG*RRSRQQ Trigger: CTGCTGCCTGGACCTCCTCCAGCCAACCATCTTTTG...CCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CCA 90 bp | TGGTCTTTATTGGAAGTTCCTCTGGGAAACCTGAGGGCTCAATGCCCCTTTCCACACTCTGTCCCCTGTTaGGTACAGCTCTGGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WSLLEVPLGNLRAQCPFPHSVPC*VQLWCS Trigger: GGAGCACCAGAGCTGTACCCAACAGGGGACAGAGTG...TGGAAAGGGGCATTGAGCCCTCAGGTTTCCCAGAGGAACTTCCAATAAAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR CAA 72 bp | CAATTTGCTCTTAATGCTCTGGGGGCAGCAGGCGGCTaGCCTCTAATTGCAGTTGTCACACCCCATCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QFALNALGAAGG*PLIAVVTPHQA Trigger: AGCTTGATGGGGTGTGACAACTGCAATTAGAGGCAAGCCGCCTGCTGCCCCCAGAGCATTAAGAGCAAATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR CAA 72 bp | GATTTGAGCTGGGAACTGCTTTCCTTTTTGAGCAGCTaGATGGGGGCAACGTGCATGCCAGGACCCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DLSWELLSFLSS*MGATCMPGPFD Trigger: GTCAAAGGGTCCTGGCATGCACGTTGCCCCCATCAAGCTGCTCAAAAAGGAAAGCAGTTCCCAGCTCAAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR CAA 72 bp | ATGCCCACAGATTTGAGCTGGGAACTGCTTTCCTTTTaGAGCAGCTTGATGGGGGCAACGTGCATGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MPTDLSWELLSF*SSLMGATCMPG Trigger: TCCTGGCATGCACGTTGCCCCCATCAAGCTGCTCAAAAAGGAAAGCAGTTCCCAGCTCAAATCTGTGGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR CAA 72 bp | TATGCCATCAAAGTCCATGTCCTCTTGGATCATCTGTaGAGTGTGCCACCCTTCAGGAGTCAGGGTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YAIKVHVLLDHL*SVPPFRSQGVG Trigger: CCCCACACCCTGACTCCTGAAGGGTGGCACACTCAACAGATGATCCAAGAGGACATGGACTTTGATGGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR CAA 72 bp | TGTGTGTTGGGATTAGCGTTCTCCACCACTGGTGTGTaGTGCTGTGTGCCTGACAGCATTCCTGCTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: CVLGLAFSTTGV*CCVPDSIPASH Trigger: GTGTGAAGCAGGAATGCTGTCAGGCACACAGCACAACACACCAGTGGTGGAGAACGCTAATCCCAACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS-3UTR TCA 90 bp | TGGGGTTTGAACTTGGGACCTTTGGAACCACAGTCAGTACTCTTAACCACTGAGCTCAGGCTGTTCCTGTaGGCTCTCAGGGCAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WGLNLGPLEPQSVLLTTELRLFL*ALRAAE Trigger: TTCAGCTGCCCTGAGAGCTCACAGGAACAGCCTGAG...CTCAGTGGTTAAGAGTACTGACTGTGGTTCCAAAGGTCCCAAGTTCAAACCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS-3UTR TCA 90 bp | TCAAATGAGGTCTTGGGAAGTAGTGGAGGAGTAACACAGGCTTCCTGGACTCCTGAAAGGGAACCGTCCTaGGCCCTTAGAAAGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SNEVLGSSGGVTQASWTPEREPS*ALRKAP Trigger: AGGAGCCTTTCTAAGGGCTCAGGACGGTTCCCTTTC...AGGAGTCCAGGAAGCCTGTGTTACTCCTCCACTACTTCCCAAGACCTCATTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTCTGTCAAAAGATGGTTaGCTGGAGGAGGTCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTHLLVLGLSKDG*LEEVQA Trigger: TGCCTGGACCTCCTCCAGCCAACCATCTTTTGACAG...ACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CCA 90 bp | AGTGTCTGTTCCTCGGGATTAGTTTGGGTTAGAGATCACCCTGAGGGTAGGCTACCCGTGACATCAACGTaGAGGTCCAGTCATCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVCSSGLVWVRDHPEGRLPVTST*RSSHLA Trigger: AGCCAGATGACTGGACCTCCACGTTGATGTCACGGG...TAGCCTACCCTCAGGGTGATCTCTAACCCAAACTAATCCCGAGGAACAGACACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTCTCAGTCCCTTGGGAGTCTAGACTGCAGGCAGAAGAGCTTCTCTTGTGGCCTTTTTCTCCTTTaGGTTCAATGGATCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSQSLGSLDCRQKSFSCGLFLL*VQWIPQ Trigger: CTGGGGGATCCATTGAACCCAAAGGAGAAAAAGGCC...ACAAGAGAAGCTCTTCTGCCTGCAGTCTAGACTCCCAAGGGACTGAGAGGAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCTTTATTGGAAGTTCCTCTGGGAAACCTGAGGGCTCAATGCCCCTTTCCAGTGACTCAGAGACCATaGGAGTCATCCAGCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WSLLEVPLGNLRAQCPFPVTQRP*ESSSQA Trigger: AGCCTGGCTGGATGACTCCCATGGTCTCTGAGTCAC...TGGAAAGGGGCATTGAGCCCTCAGGTTTCCCAGAGGAACTTCCAATAAAGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR TCA 90 bp | TGGTCTTTATTGGAAGTTCCTCTGGGAAACCTGAGGGCTCAATGCCCCTTTCCAACATCAGCTCCTGTTTaGGGCGACGCAGATAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WSLLEVPLGNLRAQCPFPTSAPV*GDADSS Trigger: ACTGCTATCTGCGTCGCCTCAAACAGGAGCTGATGT...TGGAAAGGGGCATTGAGCCCTCAGGTTTCCCAGAGGAACTTCCAATAAAGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS-3UTR TCA 90 bp | TGGTCTTTATTGGAAGTTCCTCTGGGAAACCTGAGGGCTCAATGCCCCTTTCCAATCATGCAGTTCATCTaGTCCTGCAAGCCATCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: WSLLEVPLGNLRAQCPFPIMQFI*SCKPSP Trigger: GGGGGATGGCTTGCAGGATCAGATGAACTGCATGAT...TGGAAAGGGGCATTGAGCCCTCAGGTTTCCCAGAGGAACTTCCAATAAAGACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CCA 90 bp | TTATTTCTAGGTTCACCCCAACCATCTGCTGCCCTGCAGGAGCATTATGGCAGGGCTACTGTCAAAAGATaGTTGGCTGGAGGAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFLGSPQPSAALQEHYGRATVKR*LAGGGP Trigger: TGGACCTCCTCCAGCCAACCATCTTTTGACAGTAGC...CCTGCCATAATGCTCCTGCAGGGCAGCAGATGGTTGGGGTGAACCTAGAAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CCA 90 bp | TGGTCTTTATTGGAAGTTCCTCTGGGAAACCTGAGGGCTCAATGCCCCTTTCCACTCCTTTGGGTTCAATaGATCCCCCAGTCTCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: WSLLEVPLGNLRAQCPFPLLWVQ*IPQSHP Trigger: AGGGTGAGACTGGGGGATCCATTGAACCCAAAGGAG...TGGAAAGGGGCATTGAGCCCTCAGGTTTCCCAGAGGAACTTCCAATAAAGACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGGCCTTTTTCTCCTTTaGGTTCAATGGATCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTHTCLFWGLFLL*VQWIPQ Trigger: CTGGGGGATCCATTGAACCCAAAGGAGAAAAAGGCC...CCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR CAA 72 bp | GTTTTGTCTCCTGGCAGCCGAGTGTGTTCTCAGAGCTaGCTGCTTTATGAAATACCATGCTGGTTGGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: VLSPGSRVCSQS*LLYEIPCWLGT Trigger: CGTGCCCAACCAGCATGGTATTTCATAAAGCAGCAAGCTCTGAGAACACACTCGGCTGCCAGGAGACAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR CAA 72 bp | TTGTATTGGTCCCCTGACTCTGTTCACTGCATTTCTTaGTGTGCCTTGGTAGATGTGGAGGCCAGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYWSPDSVHCIS*CALVDVEASSW Trigger: CCAGCTGCTGGCCTCCACATCTACCAAGGCACACAAAGAAATGCAGTGAACAGAGTCAGGGGACCAATACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTCTTCAGTTCCTGAAGTaGGCCCATCATGCAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTHLLVLGLQFLK*AHHAVH Trigger: ATGAACTGCATGATGGGCGCACTTCAGGAACTGAAG...ACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR TCA 90 bp | GGTAACTTGAGAAAGAAAGTGCCCTCTTCTATGGAGATTCTGGGAACAGGTGAGATCATGCAGTTCATCTaGTCCTGCAAGCCATCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GNLRKKVPSSMEILGTGEIMQFI*SCKPSP Trigger: GGGGGATGGCTTGCAGGATCAGATGAACTGCATGAT...CTCACCTGTTCCCAGAATCTCCATAGAAGAGGGCACTTTCTTTCTCAAGTTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCTGGTTCCTTTCCTATCATTGAGTTCTCACCTTCTATTACAGTGCCCAGACTGTCAAAAGATGGTTaGCTGGAGGAGGTCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAGSFPIIEFSPSITVPRLSKDG*LEEVQA Trigger: TGCCTGGACCTCCTCCAGCCAACCATCTTTTGACAG...TCTGGGCACTGTAATAGAAGGTGAGAACTCAATGATAGGAAAGGAACCAGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACAAATACACACATTCTCTCTAGGGACTCAGCTCAGCCTGACTACGACCCAGCTCTCTaGACTGGCCTTTTTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: THTHTNTHILSRDSAQPDYDPAL*TGLFLL Trigger: AAGGAGAAAAAGGCCAGTCCAGAGAGCTGGGTCGTA...GTCAGGCTGAGCTGAGTCCCTAGAGAGAATGTGTGTATTTGTGTGTGTGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR CAA 72 bp | AGCAGTGCCTTGTCAGGAAGCAGACCATTAAAATGGTaGCGGGTCCCTGAGACTGGTCTTTATTGGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSALSGSRPLKW*RVPETGLYWKF Trigger: GAACTTCCAATAAAGACCAGTCTCAGGGACCCGCAACCATTTTAATGGTCTGCTTCCTGACAAGGCACTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| 3UTR CAA 72 bp | TTCTGGGTCCCCAGTACCCAGCTATGGGCTAAAATCTaGGTCCTAGTAAGGTCTGTGATACCAACCCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FWVPSTQLWAKI*VLVRSVIPTLY Trigger: GTAAAGGGTTGGTATCACAGACCTTACTAGGACCAAGATTTTAGCCCATAGCTGGGTACTGGGGACCCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR GCA 90 bp | GCAGCTGGTTCCTTTCCTATCATTGAGTTCTCACCTTCTATTACAGTGCCCAGAGAAGTGCGCCCATCATaGAGTTCATCTGATCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAGSFPIIEFSPSITVPREVRPS*SSSDPA Trigger: TGCAGGATCAGATGAACTGCATGATGGGCGCACTTC...TCTGGGCACTGTAATAGAAGGTGAGAACTCAATGATAGGAAAGGAACCAGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGTTTGAACTTGGGACCTTTGGAACCACAGTCAGTACTCTTAACCACTGAGTGTTCCAATGCCGTCTaGACTTGTAGGAGCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WGLNLGPLEPQSVLLTTECSNAV*TCRSFS Trigger: ACTGAAGCTCCTACAAGTGCAGACGGCATTGGAACA...CTCAGTGGTTAAGAGTACTGACTGTGGTTCCAAAGGTCCCAAGTTCAAACCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR CAA 72 bp | AATGCCCCTTTCCATATAGGATGTTCAAATGAGGTCTaGGGAAGTAGTGGAGGAGTAACACAGGCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NAPFHIGCSNEV*GSSGGVTQASW Trigger: CCAGGAAGCCTGTGTTACTCCTCCACTACTTCCCAAGACCTCATTTGAACATCCTATATGGAAAGGGGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| 3UTR CAA 72 bp | AGAGACATGAATAATCTCAGAAGACAAATGTTATTCTaGATCTGGCTGTGGAGCAAATGTAGACAGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RDMNNLRRQMLF*IWLWSKCRQFA Trigger: GGCAAACTGTCTACATTTGCTCCACAGCCAGATCAAGAATAACATTTGTCTTCTGAGATTATTCATGTCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| 3UTR CAA 72 bp | CAAGGATATGGACAGGAAAGTAAAAGTTATATGAGGTaGAGTCACCATAAGCTTTCATCAACCAAGCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: QGYGQESKSYMR*SHHKLSSTKHD Trigger: GTCATGCTTGGTTGATGAAAGCTTATGGTGACTCAACCTCATATAACTTTTACTTTCCTGTCCATATCCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| 3UTR CAA 72 bp | AATGTAGACAGTTTGCCAGGTAGCATGAATGTAAGATaGGAAGTCAATTACAAACTGATTCAATCCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NVDSLPGSMNVR*EVNYKLIQSQL Trigger: AAGCTGGGATTGAATCAGTTTGTAATTGACTTCCAATCTTACATTCATGCTACCTGGCAAACTGTCTACATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS TCA 90 bp | AGGCCCTCCACTACCCTGCCAGCGAGGGCACTCAGGCTGTTCCTGTaGGCTCTCAGGGCAGCTGAAGGTGGGCGTGCCTCCCGAGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: RPSTTLPARALRLFL*ALRAAEGGRASRDL Trigger: GAGATCTCGGGAGGCACGCCCACCTTCAGCTGCCCTGAGAGCTCACAGGAACAGCCTGAGTGCCCTCGCTGGCAGGGTAGTGGAGGGCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS TCA 90 bp | GCCAGCGAGGGCACTCAGGCTGTTCCTGTGAGCTCTCAGGGCAGCTaGAGGTGGGCGTGCCTCCCGAGATCTCCAGCTGTTCCAATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ASEGTQAVPVSSQGS*RWACLPRSPAVPMP Trigger: CGGCATTGGAACAGCTGGAGATCTCGGGAGGCACGCCCACCTTCAGCTGCCCTGAGAGCTCACAGGAACAGCCTGAGTGCCCTCGCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CCA 90 bp | CAGTCATCTGGCTCCACCCACTCTGTCCCCTGTTGGGTACAGCTCTaGTGCTCCTCCGGCAGCTGGGTTTTAGGAAGGACAGCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QSSGSTHSVPCWVQL*CSSGSWVLGRTASS Trigger: GGAGCTGGCTGTCCTTCCTAAAACCCAGCTGCCGGAGGAGCACCAGAGCTGTACCCAACAGGGGACAGAGTGGGTGGAGCCAGATGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS-3UTR CAA 90 bp | GCAGGAGCATTATGGCAGGCAACAGGGGTCAGGATGGGCTCTCACTGCTGGACCCCACTCTGTCCCCTGTaGGGTACAGCTCTGGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AGALWQATGVRMGSHCWTPLCPL*GTALVL Trigger: GAGCACCAGAGCTGTACCCAACAGGGGACAGAGTGG...GGTCCAGCAGTGAGAGCCCATCCTGACCCCTGTTGCCTGCCATAATGCTCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS GCA 90 bp | TCATCTGGCTCCACCCACTCTGTCCCCTGTTGGGTACAGCTCTGGTaGTCCTCCGGCAGCTGGGTTTTAGGAAGGACAGCCAGCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSGSTHSVPCWVQLW*SSGSWVLGRTASSF Trigger: GAAGGAGCTGGCTGTCCTTCCTAAAACCCAGCTGCCGGAGGAGCACCAGAGCTGTACCCAACAGGGGACAGAGTGGGTGGAGCCAGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CCA 90 bp | AACGTGGAGGTCCAGTCATCTGGCTCCACCCACTCTGTCCCCTGTTaGGTACAGCTCTGGTGCTCCTCCGGCAGCTGGGTTTTAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: NVEVQSSGSTHSVPC*VQLWCSSGSWVLGR Trigger: CCTTCCTAAAACCCAGCTGCCGGAGGAGCACCAGAGCTGTACCCAACAGGGGACAGAGTGGGTGGAGCCAGATGACTGGACCTCCACGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS-3UTR CAA 90 bp | GCGGGTCCCCTGTTGACTTCCAGGTTGATGAGGATAGATGTGTCCAGCTCACCGCAGCCAGGCTTCTCCTaGAGCAGCCGGTCTCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: AGPLLTSRLMRIDVSSSPQPGFS*SSRSLS Trigger: CGACAGAGACCGGCTGCTCAAGGAGAAGCCTGGCTG...CGGTGAGCTGGACACATCTATCCTCATCAACCTGGAAGTCAACAGGGGACCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| CDS-3UTR CAA 90 bp | GCAGGAGCATTATGGCAGGCAACAGGGGTCAGGATGGGCTCTCACTGCTGGACCTGGGCTCTCCTGTGCTaGAGAAAGGGAACCGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGALWQATGVRMGSHCWTWALLC*RKGTVL Trigger: CAGGACGGTTCCCTTTCTCAAGCACAGGAGAGCCCA...GGTCCAGCAGTGAGAGCCCATCCTGACCCCTGTTGCCTGCCATAATGCTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CCA 90 bp | GGACAGCCAGCTCCTTCCCACAGACACTCCTACGGCATGGCAACTTaGGGCTACTGTCAAAAGATGGTTGGCTGGAGGAGGTCCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GQPAPSHRHSYGMAT*GYCQKMVGWRRSRQ Trigger: CTGCCTGGACCTCCTCCAGCCAACCATCTTTTGACAGTAGCCCCAAGTTGCCATGCCGTAGGAGTGTCTGTGGGAAGGAGCTGGCTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS-3UTR CAA 90 bp | GGGTCCCTGAGACTGGTCTTTATTGGAAGTTCCTCTGGGAAACCTGAGGGCTCAGAGGGTTCTAAGGCCTaGGGGCTGCTTGTGGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSLRLVFIGSSSGKPEGSEGSKA*GLLVAG Trigger: CCCCGCCACAAGCAGCCCCAAGGCCTTAGAACCCTC...TGAGCCCTCAGGTTTCCCAGAGGAACTTCCAATAAAGACCAGTCTCAGGGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTCCGAGGGTTCTAAGGCCTaGGGGCTGCTTGTGGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTPACSGSEGSKA*GLLVAG Trigger: CCCCGCCACAAGCAGCCCCAAGGCCTTAGAACCCTC...GGACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS GCA 90 bp | GGTCTGCAAAAACATTGTCCCCCAACACCAGAGGCTGCCGATTTCTaGCCCGTGACATCAACGTGGAGGTCCAGTCATCTGGCTCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: GLQKHCPPTPEAADF*PVTSTWRSSHLAPP Trigger: GGGTGGAGCCAGATGACTGGACCTCCACGTTGATGTCACGGGGCAGAAATCGGCAGCCTCTGGTGTTGGGGGACAATGTTTTTGCAGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTCAGCCAGGCTTCTCCTaGAGCAGCCGGTCTCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTHLLVLGQPGFS*SSRSLS Trigger: CGACAGAGACCGGCTGCTCAAGGAGAAGCCTGGCTG...ACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS GCA 90 bp | CCGTCTGCACTTGTAGGAGCTTCAGTTCCTGAAGTGCGCCCATCATaGAGTTCATCTGATCCTGCAAGCCATCCCCCACCTCCTTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PSALVGASVPEVRPS*SSSDPASHPPPPSW Trigger: CCATGAAGGAGGTGGGGGATGGCTTGCAGGATCAGATGAACTGCATGATGGGCGCACTTCAGGAACTGAAGCTCCTACAAGTGCAGACGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTCCACTCTGTCCCCTGTaGGGTACAGCTCTGGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTHLLVLGPLCPL*GTALVL Trigger: GAGCACCAGAGCTGTACCCAACAGGGGACAGAGTGG...ACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTCCTGGGCTCTCCTGTGCTaGAGAAAGGGAACCGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTPACSGSWALLC*RKGTVL Trigger: CAGGACGGTTCCCTTTCTCAAGCACAGGAGAGCCCA...GGACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CCA 90 bp | TTTAGGAAGGACAGCCAGCTCCTTCCCACAGACACTCCTACGGCATaGCAACTTGGGGCTACTGTCAAAAGATGGTTGGCTGGAGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FRKDSQLLPTDTPTA*QLGATVKRWLAGGG Trigger: ACCTCCTCCAGCCAACCATCTTTTGACAGTAGCCCCAAGTTGCCATGCCGTAGGAGTGTCTGTGGGAAGGAGCTGGCTGTCCTTCCTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS TCA 90 bp | CTTAGAAAGGCTCCTCTTCTTGACTTTCTTCGAGCGTCCTGCTCGTaGCTCAGAGACCATGGGAGTCATCCAGCCAGGCTTCTCCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LRKAPLLDFLRASCS*LRDHGSHPARLLLE Trigger: CTCAAGGAGAAGCCTGGCTGGATGACTCCCATGGTCTCTGAGTCACGAGCAGGACGCTCGAAGAAAGTCAAGAAGAGGAGCCTTTCTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGGTCCCCGAAAGGCTCCTCTTCTaGACTTTCTTCGAGCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTCLFWVPERLLF*TFFERP Trigger: AGGACGCTCGAAGAAAGTCAAGAAGAGGAGCCTTTC...GGGGACCCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CAA 90 bp | CCTGCCTCTCCCAATTATTGTCACATCCAGCCTCAAAGAACACCACCACCACCAAGGTCTGCAAAAACATaGTCCCCCAACACCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PASPNYCHIQPQRTPPPPRSAKT*SPNTRG Trigger: GCCTCTGGTGTTGGGGGACAATGTTTTTGCAGACCT...TGGTGGTGGTGGTGTTCTTTGAGGCTGGATGTGACAATAATTGGGAGAGGCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CAA 90 bp | TCCTCCTCTCAGTCCCTTGGGAGTCTAGACTGCAGGCAGAAGAGCTTCTCTTGTTGGCCTTTTTCTCCTTaGGGTTCAATGGATCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSQSLGSLDCRQKSFSCWPFSP*GSMDPP Trigger: TGGGGGATCCATTGAACCCAAAGGAGAAAAAGGCCA...ACAAGAGAAGCTCTTCTGCCTGCAGTCTAGACTCCCAAGGGACTGAGAGGAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
||
| CDS-3UTR CAA 90 bp | CACACACACACACACACACACACACACACACACACACACACCTGCTTGTTCTGGTGGCCTTTTTCTCCTTaGGGTTCAATGGATCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HTHTHTHTHTHTHTCLFWWPFSP*GSMDPP Trigger: TGGGGGATCCATTGAACCCAAAGGAGAAAAAGGCCA...CCAGAACAAGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CAA 90 bp | TGGTCTTTATTGGAAGTTCCTCTGGGAAACCTGAGGGCTCAATGCCCCTTTCCACTACGGCATGGCAACTaGGGGCTACTGTCAAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: WSLLEVPLGNLRAQCPFPLRHGN*GLLSKD Trigger: ATCTTTTGACAGTAGCCCCAAGTTGCCATGCCGTAG...TGGAAAGGGGCATTGAGCCCTCAGGTTTCCCAGAGGAACTTCCAATAAAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CAA 90 bp | TGGTCTTTATTGGAAGTTCCTCTGGGAAACCTGAGGGCTCAATGCCCCTTTCCAGAAAGGCTCCTCTTCTaGACTTTCTTCGAGCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WSLLEVPLGNLRAQCPFPERLLF*TFFERP Trigger: AGGACGCTCGAAGAAAGTCAAGAAGAGGAGCCTTTC...TGGAAAGGGGCATTGAGCCCTCAGGTTTCCCAGAGGAACTTCCAATAAAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
||
| CDS-3UTR CAA 90 bp | TGGGGTTTGAACTTGGGACCTTTGGAACCACAGTCAGTACTCTTAACCACTGAGCTACGGCATGGCAACTaGGGGCTACTGTCAAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: WGLNLGPLEPQSVLLTTELRHGN*GLLSKD Trigger: ATCTTTTGACAGTAGCCCCAAGTTGCCATGCCGTAG...CTCAGTGGTTAAGAGTACTGACTGTGGTTCCAAAGGTCCCAAGTTCAAACCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066610.8 |
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| CDS TCA 72 bp | ACTACCCTGCCAGCGAGGGCACTCAGGCTGTTCCTGTaGGCTCTCAGGGCAGCTGAAGGTGGGCGTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: TTLPARALRLFL*ALRAAEGGRAS Trigger: GGAGGCACGCCCACCTTCAGCTGCCCTGAGAGCTCACAGGAACAGCCTGAGTGCCCTCGCTGGCAGGGTAGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CAA 72 bp | TCAGAGACCATGGGAGTCATCCAGCCAGGCTTCTCCTaGAGCAGCCGGTCTCTGTCGGGCCGCACGCTACGC | + |
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Preference number: 6 (lower is better) Translates to: SETMGVIQPGFS*SSRSLSGRTLR Trigger: GCGTAGCGTGCGGCCCGACAGAGACCGGCTGCTCAAGGAGAAGCCTGGCTGGATGACTCCCATGGTCTCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CCA 72 bp | CGGCATGGCAACTTGGGGCTACTGTCAAAAGATGGTTaGCTGGAGGAGGTCCAGGCAGCAGGCCCAGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RHGNLGLLSKDG*LEEVQAAGPAG Trigger: GCCTGCTGGGCCTGCTGCCTGGACCTCCTCCAGCCAACCATCTTTTGACAGTAGCCCCAAGTTGCCATGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CCA 72 bp | GTCCAGTCATCTGGCTCCACCCACTCTGTCCCCTGTTaGGTACAGCTCTGGTGCTCCTCCGGCAGCTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: VQSSGSTHSVPC*VQLWCSSGSWV Trigger: AACCCAGCTGCCGGAGGAGCACCAGAGCTGTACCCAACAGGGGACAGAGTGGGTGGAGCCAGATGACTGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CAA 90 bp | GACACTCCTACGGCATGGCAACTTGGGGCTACTGTCAAAAGATGGTaGGCTGGAGGAGGTCCAGGCAGCAGGCCCAGCAGGCCCTCCACT | + |
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Preference number: 6 (lower is better) Translates to: DTPTAWQLGATVKRW*AGGGPGSRPSRPST Trigger: AGTGGAGGGCCTGCTGGGCCTGCTGCCTGGACCTCCTCCAGCCAACCATCTTTTGACAGTAGCCCCAAGTTGCCATGCCGTAGGAGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CAA 90 bp | GCTCGTGACTCAGAGACCATGGGAGTCATCCAGCCAGGCTTCTCCTaGAGCAGCCGGTCTCTGTCGGGCCGCACGCTACGCAAGAACTTC | + |
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Preference number: 6 (lower is better) Translates to: ARDSETMGVIQPGFS*SSRSLSGRTLRKNF Trigger: GAAGTTCTTGCGTAGCGTGCGGCCCGACAGAGACCGGCTGCTCAAGGAGAAGCCTGGCTGGATGACTCCCATGGTCTCTGAGTCACGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS TCA 72 bp | GTCCCCCAACACCAGAGGCTGCCGATTTCTGCCCCGTaGCATCAACGTGGAGGTCCAGTCATCTGGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: VPQHQRLPISAP*HQRGGPVIWLH Trigger: GTGGAGCCAGATGACTGGACCTCCACGTTGATGTCACGGGGCAGAAATCGGCAGCCTCTGGTGTTGGGGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS GCA 72 bp | TCCACCCACTCTGTCCCCTGTTGGGTACAGCTCTGGTaGTCCTCCGGCAGCTGGGTTTTAGGAAGGACAGCC | + |
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Preference number: 6 (lower is better) Translates to: STHSVPCWVQLW*SSGSWVLGRTA Trigger: GGCTGTCCTTCCTAAAACCCAGCTGCCGGAGGAGCACCAGAGCTGTACCCAACAGGGGACAGAGTGGGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CCA 72 bp | CCCTGTTGGGTACAGCTCTGGTGCTCCTCCGGCAGCTaGGTTTTAGGAAGGACAGCCAGCTCCTTCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: PCWVQLWCSSGS*VLGRTASSFPQ Trigger: CTGTGGGAAGGAGCTGGCTGTCCTTCCTAAAACCCAGCTGCCGGAGGAGCACCAGAGCTGTACCCAACAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CCA 72 bp | GGCTCCACCCACTCTGTCCCCTGTTGGGTACAGCTCTaGTGCTCCTCCGGCAGCTGGGTTTTAGGAAGGACA | + |
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Preference number: 6 (lower is better) Translates to: GSTHSVPCWVQL*CSSGSWVLGRT Trigger: TGTCCTTCCTAAAACCCAGCTGCCGGAGGAGCACCAGAGCTGTACCCAACAGGGGACAGAGTGGGTGGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CCA 72 bp | CCAGAGGCTGCCGATTTCTGCCCCGTGACATCAACGTaGAGGTCCAGTCATCTGGCTCCACCCACTCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: PEAADFCPVTST*RSSHLAPPTLS Trigger: GGACAGAGTGGGTGGAGCCAGATGACTGGACCTCCACGTTGATGTCACGGGGCAGAAATCGGCAGCCTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CAA 90 bp | CAACGTGGAGGTCCAGTCATCTGGCTCCACCCACTCTGTCCCCTGTaGGGTACAGCTCTGGTGCTCCTCCGGCAGCTGGGTTTTAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: QRGGPVIWLHPLCPL*GTALVLLRQLGFRK Trigger: CTTCCTAAAACCCAGCTGCCGGAGGAGCACCAGAGCTGTACCCAACAGGGGACAGAGTGGGTGGAGCCAGATGACTGGACCTCCACGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CCA 72 bp | CCCTACAGGAGGGTTCTAAGGCCTTGGGGCTGCTTGTaGCGGGGGTTTCAATATGTCTGGGCTCTCCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: PYRRVLRPWGCL*RGFQYVWALLC Trigger: GCACAGGAGAGCCCAGACATATTGAAACCCCCGCCACAAGCAGCCCCAAGGCCTTAGAACCCTCCTGTAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CAA 90 bp | AGGACAGCCAGCTCCTTCCCACAGACACTCCTACGGCATGGCAACTaGGGGCTACTGTCAAAAGATGGTTGGCTGGAGGAGGTCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: RTASSFPQTLLRHGN*GLLSKDGWLEEVQA Trigger: TGCCTGGACCTCCTCCAGCCAACCATCTTTTGACAGTAGCCCCAAGTTGCCATGCCGTAGGAGTGTCTGTGGGAAGGAGCTGGCTGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CCA 72 bp | CCTTGGGGCTGCTTGTGGCGGGGGTTTCAATATGTCTaGGCTCTCCTGTGCTTGAGAAAGGGAACCGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PWGCLWRGFQYV*ALLCLRKGTVL Trigger: CAGGACGGTTCCCTTTCTCAAGCACAGGAGAGCCCAGACATATTGAAACCCCCGCCACAAGCAGCCCCAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS GCA 72 bp | AAACATTGTCCCCCAACACCAGAGGCTGCCGATTTCTaGCCCGTGACATCAACGTGGAGGTCCAGTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: KHCPPTPEAADF*PVTSTWRSSHL Trigger: CAGATGACTGGACCTCCACGTTGATGTCACGGGGCAGAAATCGGCAGCCTCTGGTGTTGGGGGACAATGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CCA 72 bp | GACAGCCAGCTCCTTCCCACAGACACTCCTACGGCATaGCAACTTGGGGCTACTGTCAAAAGATGGTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: DSQLLPTDTPTA*QLGATVKRWLA Trigger: AGCCAACCATCTTTTGACAGTAGCCCCAAGTTGCCATGCCGTAGGAGTGTCTGTGGGAAGGAGCTGGCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CAA 72 bp | AGCTCCTTCCCACAGACACTCCTACGGCATGGCAACTaGGGGCTACTGTCAAAAGATGGTTGGCTGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SSFPQTLLRHGN*GLLSKDGWLEE Trigger: CTCCTCCAGCCAACCATCTTTTGACAGTAGCCCCAAGTTGCCATGCCGTAGGAGTGTCTGTGGGAAGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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| CDS CAA 72 bp | AAATCTAGCCAGTTACCCACCAGGTCTGCAAAAACATaGTCCCCCAACACCAGAGGCTGCCGATTTCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: KSSQLPTRSAKT*SPNTRGCRFLP Trigger: GGGCAGAAATCGGCAGCCTCTGGTGTTGGGGGACAATGTTTTTGCAGACCTGGTGGGTAACTGGCTAGATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066610.8 ENSMUST00000098273.3 |
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