Pregenerated sensors for INHBE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047492Ensembl transcript IDs: ENSMUST00000059718.6
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGACCCCGACACCCCTCCTTCCTCGGCGCCTGCTCCTCTTCCTCTTaGCCTTGTCAAAGCAGGCAATGCACCCTGTTCTTAGCCTGTATG | + |
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Preference number: 1 (lower is better) Translates to: GPRHPSFLGACSSSS*PCQSRQCTLFLACM Trigger: CATACAGGCTAAGAACAGGGTGCATTGCCTGCTTTGACAAGGTCAAGAGGAAGAGGAGCAGGCGCCGAGGAAGGAGGGGTGTCGGGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR TCA 90 bp | TCTTCCTTCCCTCCCACGGCATCCCTGCTGTCCTGGAACAGGGCTTaGTGTAGAAAATGGTGCTGGCCAGGCAGTCCCTTGAAAGGCAAC | + |
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Preference number: 1 (lower is better) Translates to: SSFPPTASLLSWNRA*CRKWCWPGSPLKGN Trigger: GTTGCCTTTCAAGGGACTGCCTGGCCAGCACCATTTTCTACATCAAGCCCTGTTCCAGGACAGCAGGGATGCCGTGGGAGGGAAGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGTGGTaGTGGTGGTGGTGGAGGAGAGATGGCTCCACTAGGGATGCTTGT | + |
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Preference number: 1 (lower is better) Translates to: CVCVCVCVCVCVWWW*WWWWRRDGSTRDAC Trigger: ACAAGCATCCCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACCACCACACACACACACACACACACACACACACACACACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGTGGTGGTaGTGGTGGTGGAGGAGAGATGGCTCCACTAGGGATGCTTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVCVCVWWWW*WWWRRDGSTRDACF Trigger: AAAACAAGCATCCCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACCACCACACACACACACACACACACACACACACACACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGTGGTGGTGGTGGTaGTGGAGGAGAGATGGCTCCACTAGGGATGCTTGTTTTTCTTAT | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVCVWWWWWW*WRRDGSTRDACFSY Trigger: ATAAGAAAAACAAGCATCCCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACCACCACACACACACACACACACACACACACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR GCA 90 bp | GCAATGCACCCTGTTCTTAGCCTGTATGTTTGTCTTTTCCTAATCTaGCCACCCTTCTACTTCCGCCTTCATTACTTGAGGAACTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: AMHPVLSLYVCLFLI*PPFYFRLHYLRNFF Trigger: AAAGAAGTTCCTCAAGTAATGAAGGCGGAAGTAGAAGGGTGGGCAGATTAGGAAAAGACAAACATACAGGCTAAGAACAGGGTGCATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR CCA 90 bp | ACTATATCAGCAATCATGTCATCAGCTGTGTCATATAACACACTCTaGAAAGACTGTCTGGTTTGTTTGTTTGTTTGTTTGTTTGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: TISAIMSSAVSYNTL*KDCLVCLFVCLFAL Trigger: CAAAGCAAACAAACAAACAAACAAACAAACCAGACAGTCTTTCCAGAGTGTGTTATATGACACAGCTGATGACATGATTGCTGATATAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR CAA 90 bp | GGGACCCCGACACCCCTCCTTCCTCGGCGCCTGCTCCTCTTCCTCTaGACCTTGTCAAAGCAGGCAATGCACCCTGTTCTTAGCCTGTAT | + |
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Preference number: 2 (lower is better) Translates to: GTPTPLLPRRLLLFL*TLSKQAMHPVLSLY Trigger: ATACAGGCTAAGAACAGGGTGCATTGCCTGCTTTGACAAGGTCAAGAGGAAGAGGAGCAGGCGCCGAGGAAGGAGGGGTGTCGGGGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR CAA 90 bp | CCGACACCCCTCCTTCCTCGGCGCCTGCTCCTCTTCCTCTTGACCTaGTCAAAGCAGGCAATGCACCCTGTTCTTAGCCTGTATGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: PTPLLPRRLLLFLLT*SKQAMHPVLSLYVC Trigger: ACAAACATACAGGCTAAGAACAGGGTGCATTGCCTGCTTTGACAAGGTCAAGAGGAAGAGGAGCAGGCGCCGAGGAAGGAGGGGTGTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTGGTGGTGGTGGTGGAGGAGAGATGGCTCCACTAGGGATGCTTGTTTTTAGTCTTGAAAACCCCTaGGAAAGTCTCAGAAACCCG | + |
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Preference number: 2 (lower is better) Translates to: GGGGGGGGEMAPLGMLVFSLENP*ESLRNP Trigger: CGGGTTTCTGAGACTTTCTCAGGGGTTTTCAAGACT...AAAAACAAGCATCCCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR CAA 90 bp | CCAGGCAGTCCCTTGAAAGGCAACGCTTTACCCATCTGTCCACATTaGAAACAGCCTGAAATAGGCCAGAATCTGGGACAAGAAAACGCC | + |
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Preference number: 2 (lower is better) Translates to: PGSPLKGNALPICPH*KQPEIGQNLGQENA Trigger: GGCGTTTTCTTGTCCCAGATTCTGGCCTATTTCAGGCTGTTTCAAATGTGGACAGATGGGTAAAGCGTTGCCTTTCAAGGGACTGCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR-3UTR CCA 90 bp | GGATCTCATTCTATAGCTCAGGCTAGCCCAGAATTCACTATGAAGGCCGGTCTTACCACACTTCGCTTCTaGCCCATTTTAACAACCCCT | + |
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Preference number: 2 (lower is better) Translates to: GSHSIAQASPEFTMKAGLTTLRF*PILTTP Trigger: AGGGGTTGTTAAAATGGGCCAGAAGCGAAGTGTGGT...AAGACCGGCCTTCATAGTGAATTCTGGGCTAGCCTGAGCTATAGAATGAGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR-3UTR CCA 90 bp | TTGACCTTGTCAAAGCAGGCAATGCACCCTGTTCTTAGCCTGTATGTTTGTCTTTATTGGGTGTCAGTATaGATCCGGAACTCGAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LTLSKQAMHPVLSLYVCLYWVSV*IRNSSF Trigger: GAAGCTCGAGTTCCGGATCCATACTGACACCCAATA...AAGACAAACATACAGGCTAAGAACAGGGTGCATTGCCTGCTTTGACAAGGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR-3UTR TCA 90 bp | GTAGTTATAAGTGTAAGCCACCACACCCTGTTCCCACTGTACAATGTAAAGATACCCCAACTTGAACCTTaGACTTCACCCAGAACCTTC | + |
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Preference number: 2 (lower is better) Translates to: VVISVSHHTLFPLYNVKIPQLEP*TSPRTF Trigger: GAAGGTTCTGGGTGAAGTTCAAGGTTCAAGTTGGGG...TATCTTTACATTGTACAGTGGGAACAGGGTGTGGTGGCTTACACTTATAACTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR-3UTR TCA 90 bp | TTGACCTTGTCAAAGCAGGCAATGCACCCTGTTCTTAGCCTGTATGTTTGTCTTACATTTGAAACAGCCTaGAATAGGCCAGAATCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LTLSKQAMHPVLSLYVCLTFETA*NRPESG Trigger: CCCAGATTCTGGCCTATTTCAGGCTGTTTCAAATGT...AAGACAAACATACAGGCTAAGAACAGGGTGCATTGCCTGCTTTGACAAGGTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR-3UTR GCA 90 bp | GTAGTTATAAGTGTAAGCCACCACACCCTGTTCCCACTGTACAATGTAAAGATACAAACCCAGGCATACTaGTACACAGCTTATTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: VVISVSHHTLFPLYNVKIQTQAY*YTAYWV Trigger: CACCCAATAAGCTGTGTAGCAGTATGCCTGGGTTTG...TATCTTTACATTGTACAGTGGGAACAGGGTGTGGTGGCTTACACTTATAACTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR-3UTR GCA 90 bp | GTAGTTATAAGTGTAAGCCACCACACCCTGTTCCCACTGTACAATGTAAAGATATGTCTTTTCCTAATCTaGCCACCCTTCTACTTCCGC | + |
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Preference number: 2 (lower is better) Translates to: VVISVSHHTLFPLYNVKICLFLI*PPFYFR Trigger: GCGGAAGTAGAAGGGTGGGCAGATTAGGAAAAGACA...TATCTTTACATTGTACAGTGGGAACAGGGTGTGGTGGCTTACACTTATAACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR TCA 72 bp | CCTCCCACGGCATCCCTGCTGTCCTGGAACAGGGCTTaGTGTAGAAAATGGTGCTGGCCAGGCAGTCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: PPTASLLSWNRA*CRKWCWPGSPL Trigger: CAAGGGACTGCCTGGCCAGCACCATTTTCTACATCAAGCCCTGTTCCAGGACAGCAGGGATGCCGTGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR CCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGTGGTaGTGGTGGTGGTGGAGGAGAGATGGCTCCACTAGG | + |
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Preference number: 3 (lower is better) Translates to: VCVCVCVCVWWW*WWWWRRDGSTR Trigger: CCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACCACCACACACACACACACACACACACACACAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR CCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTaGTGGTGGTGGTGGTGGTGGAGGAGAGATGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: VCVCVCVCVCVW*WWWWWWRRDGS Trigger: GGAGCCATCTCTCCTCCACCACCACCACCACCACCACCACACACACACACACACACACACACACACACACAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR-3UTR CAA 90 bp | GGTGGTGGTGGTGGTGGTGGAGGAGAGATGGCTCCACTAGGGATGCTTGTTTTTTGGCCAGGCAGTCCCTaGAAAGGCAACGCTTTACCC | + |
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Preference number: 3 (lower is better) Translates to: GGGGGGGGEMAPLGMLVFWPGSP*KGNALP Trigger: GGGTAAAGCGTTGCCTTTCAAGGGACTGCCTGGCCA...AAAAACAAGCATCCCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR CCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGGTGGTGGTGGTaGTGGTGGTGGAGGAGAGATGGCTCCACTAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCVWWWW*WWWRRDGSTRD Trigger: ATCCCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACCACCACACACACACACACACACACACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR CCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGTaGTGGTGGTGGTGGTGGAGGAGAGATGGCTCCACT | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCVCVWW*WWWWWRRDGST Trigger: AGTGGAGCCATCTCTCCTCCACCACCACCACCACCACCACCACACACACACACACACACACACACACACACA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR TCA 72 bp | GAACTCGAGCTTCCAGACACGTGGGAACCCCCAACTTaGACCTTGAACTTCACCCAGAACCTTCAGGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: ELELPDTWEPPT*TLNFTQNLQAL Trigger: CAGGGCCTGAAGGTTCTGGGTGAAGTTCAAGGTTCAAGTTGGGGGTTCCCACGTGTCTGGAAGCTCGAGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR CCA 72 bp | GTGTGTGTGTGTGTGTGGTGGTGGTGGTGGTGGTGGTaGAGGAGAGATGGCTCCACTAGGGATGCTTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: VCVCVWWWWWWW*RRDGSTRDACF Trigger: AAAACAAGCATCCCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACCACCACACACACACACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR-3UTR CAA 90 bp | GGTGGTGGTGGTGGTGGTGGAGGAGAGATGGCTCCACTAGGGATGCTTGTTTTTGTGGGAACCCCCAACTaGAACCTTGAACTTCACCCA | + |
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Preference number: 3 (lower is better) Translates to: GGGGGGGGEMAPLGMLVFVGTPN*NLELHP Trigger: TGGGTGAAGTTCAAGGTTCAAGTTGGGGGTTCCCAC...AAAAACAAGCATCCCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR-3UTR CAA 90 bp | GGTGGTGGTGGTGGTGGTGGAGGAGAGATGGCTCCACTAGGGATGCTTGTTTTTCTGCTCCTCTTCCTCTaGACCTTGTCAAAGCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: GGGGGGGGEMAPLGMLVFLLLFL*TLSKQA Trigger: TGCCTGCTTTGACAAGGTCAAGAGGAAGAGGAGCAG...AAAAACAAGCATCCCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR GCA 72 bp | CCATTTAAGTTCCATAGGGGTCAAACCCAGGCATACTaGTACACAGCTTATTGGGTGTCAGTATGGATCCGG | + |
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Preference number: 3 (lower is better) Translates to: PFKFHRGQTQAY*YTAYWVSVWIR Trigger: CCGGATCCATACTGACACCCAATAAGCTGTGTAGCAGTATGCCTGGGTTTGACCCCTATGGAACTTAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR CCA 90 bp | TGTGTTCTTCCTTCCCTCCCACGGCATCCCTGCTGTCCTGGAACAGGGCTTGATTTGGGGTGCCAGTGTTaGGCCCCCACAGGACGGGCA | + |
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Preference number: 4 (lower is better) Translates to: CVLPSLPRHPCCPGTGLDLGCQC*APTGRA Trigger: TGCCCGTCCTGTGGGGGCCCAACACTGGCACCCCAA...ATCAAGCCCTGTTCCAGGACAGCAGGGATGCCGTGGGAGGGAAGGAAGAACACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR GCA 90 bp | GGTGGTGGTGGTGGTGGTGGAGGAGAGATGGCTCCACTAGGGATGCTTGTTTTTGGCAGAGTCAGGGCGTaGCAGCCAGAGGAAGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: GGGGGGGGEMAPLGMLVFGRVRA*QPEEVV Trigger: AACCACTTCCTCTGGCTGGCACGCCCTGACTCTGCC...AAAAACAAGCATCCCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR GCA 90 bp | TGGTGGTGGTGGTGGTGGTGGTGGAGGAGAGATGGCTCCACTAGGGATGCTTGTTCCAAGAAGGGACGTTaGTGTCCCGCTGTGTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: WWWWWWWWRRDGSTRDACSKKGR*CPAVSK Trigger: CTTGGACACAGCGGGACAGCAACGTCCCTTCTTGGA...ACAAGCATCCCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR GCA 90 bp | TGTGTTCTTCCTTCCCTCCCACGGCATCCCTGCTGTCCTGGAACAGGGCTTGATAGAGAGAGGCCTTCGTaGAGTGGGGACACAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: CVLPSLPRHPCCPGTGLDRERPS*SGDTAG Trigger: TCCTGCTGTGTCCCCACTGCACGAAGGCCTCTCTCT...ATCAAGCCCTGTTCCAGGACAGCAGGGATGCCGTGGGAGGGAAGGAAGAACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR CCA 90 bp | TGTGTTCTTCCTTCCCTCCCACGGCATCCCTGCTGTCCTGGAACAGGGCTTGATCCAGGATTTGCTGCTTaGCTAGCTCCAGGACCAGAG | + |
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Preference number: 4 (lower is better) Translates to: CVLPSLPRHPCCPGTGLDPGFAA*LAPGPE Trigger: CTCTGGTCCTGGAGCTAGCCAAGCAGCAAATCCTGG...ATCAAGCCCTGTTCCAGGACAGCAGGGATGCCGTGGGAGGGAAGGAAGAACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR GCA 90 bp | GGTGGTGGTGGTGGTGGTGGAGGAGAGATGGCTCCACTAGGGATGCTTGTTTTTAGTCCCTCCAGGATTTaGTGCTTGGCTAGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GGGGGGGGEMAPLGMLVFSPSRI*CLASSR Trigger: CCTGGAGCTAGCCAAGCAGCAAATCCTGGAGGGACT...AAAAACAAGCATCCCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| 3UTR CAA 72 bp | GGAACTCGAGCTTCCAGACACGTGGGAACCCCCAACTaGAACCTTGAACTTCACCCAGAACCTTCAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: GTRASRHVGTPN*NLELHPEPSGP Trigger: AGGGCCTGAAGGTTCTGGGTGAAGTTCAAGGTTCAAGTTGGGGGTTCCCACGTGTCTGGAAGCTCGAGTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR GCA 90 bp | ATAGGCCAGAATCTGGGACAAGAAAACGCCCATTTAAGTTCCATAGGGGTCAAACAGCAATGCCAGGACTaGCAGCCAGGTGGGGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: IGQNLGQENAHLSSIGVKQQCQD*QPGGAG Trigger: GCCCGCCCCACCTGGCTGGCAGTCCTGGCATTGCTG...TTTGACCCCTATGGAACTTAAATGGGCGTTTTCTTGTCCCAGATTCTGGCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR CCA 90 bp | CTAATCTGCCCACCCTTCTACTTCCGCCTTCATTACTTGAGGAACTTCTTTCTCGTCTCCGGAGGGCTCTaGTCAGTGCTGCCTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LICPPFYFRLHYLRNFFLVSGGL*SVLPGA Trigger: TGCCCCAGGCAGCACTGACCAGAGCCCTCCGGAGAC...GAGAAAGAAGTTCCTCAAGTAATGAAGGCGGAAGTAGAAGGGTGGGCAGATTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR GCA 90 bp | TTGACCTTGTCAAAGCAGGCAATGCACCCTGTTCTTAGCCTGTATGTTTGTCTTGGCTCTGGTCAGTGCTaGCTGGGGCAGAGGCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: LTLSKQAMHPVLSLYVCLGSGQC*LGQRPS Trigger: ACTCGGCCTCTGCCCCAGGCAGCACTGACCAGAGCC...AAGACAAACATACAGGCTAAGAACAGGGTGCATTGCCTGCTTTGACAAGGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR CCA 90 bp | GGATCTCATTCTATAGCTCAGGCTAGCCCAGAATTCACTATGAAGGCCGGTCTTCGGGCATGGTACAGGTaGTGGGACCAAAGAGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: GSHSIAQASPEFTMKAGLRAWYR*WDQRGD Trigger: GTCCCCTCTTTGGTCCCACCACCTGTACCATGCCCG...AAGACCGGCCTTCATAGTGAATTCTGGGCTAGCCTGAGCTATAGAATGAGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR CCA 90 bp | GGTGGTGGTGGTGGTGGTGGAGGAGAGATGGCTCCACTAGGGATGCTTGTTTTTCTCTACTACCATGTCTaGCACATCGGTCTTGACCAC | + |
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Preference number: 4 (lower is better) Translates to: GGGGGGGGEMAPLGMLVFLYYHV*HIGLDH Trigger: GTGGTCAAGACCGATGTGCCAGACATGGTAGTAGAG...AAAAACAAGCATCCCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR TCA 90 bp | ATAGGCCAGAATCTGGGACAAGAAAACGCCCATTTAAGTTCCATAGGGGTCAAAGGGACAGCTGGAAGGTaGGCATGGAGCGGTAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: IGQNLGQENAHLSSIGVKGTAGR*AWSGRL Trigger: CAACCTACCGCTCCATGCTCACCTTCCAGCTGTCCC...TTTGACCCCTATGGAACTTAAATGGGCGTTTTCTTGTCCCAGATTCTGGCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR GCA 90 bp | ATAGGCCAGAATCTGGGACAAGAAAACGCCCATTTAAGTTCCATAGGGGTCAAAACCATGCTCTTGGGCTaGAGTCTCCGGAGGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: IGQNLGQENAHLSSIGVKTMLLG*SLRRAL Trigger: CAGAGCCCTCCGGAGACTGCAGCCCAAGAGCATGGT...TTTGACCCCTATGGAACTTAAATGGGCGTTTTCTTGTCCCAGATTCTGGCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR GCA 90 bp | TTGACCTTGTCAAAGCAGGCAATGCACCCTGTTCTTAGCCTGTATGTTTGTCTTAAAGAGGGAGGCACATaGAGCCAGAGGCGGGCATGG | + |
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Preference number: 4 (lower is better) Translates to: LTLSKQAMHPVLSLYVCLKEGGT*SQRRAW Trigger: CCATGCCCGCCTCTGGCTGCATGTGCCTCCCTCTTT...AAGACAAACATACAGGCTAAGAACAGGGTGCATTGCCTGCTTTGACAAGGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR GCA 90 bp | TTGACCTTGTCAAAGCAGGCAATGCACCCTGTTCTTAGCCTGTATGTTTGTCTTCCTCCTGGCCCGACCTaGTCCAGGTTCATTAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: LTLSKQAMHPVLSLYVCLPPGPT*SRFISS Trigger: CGAGCTAATGAACCTGGAGCAGGTCGGGCCAGGAGG...AAGACAAACATACAGGCTAAGAACAGGGTGCATTGCCTGCTTTGACAAGGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR CCA 90 bp | CTAATCTGCCCACCCTTCTACTTCCGCCTTCATTACTTGAGGAACTTCTTTCTCGAGGCCTTCGTGCAGTaGGGACACAGCAGGAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: LICPPFYFRLHYLRNFFLEAFVQ*GHSRKN Trigger: GTTCTTCCTGCTGTGTCCCCACTGCACGAAGGCCTC...GAGAAAGAAGTTCCTCAAGTAATGAAGGCGGAAGTAGAAGGGTGGGCAGATTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR CCA 90 bp | CAGCCTGAAATAGGCCAGAATCTGGGACAAGAAAACGCCCATTTAAGTTCCATAGCATGGTACAGGTGGTaGGACCAAAGAGGGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: QPEIGQNLGQENAHLSSIAWYRW*DQRGDS Trigger: GCTGTCCCCTCTTTGGTCCCACCACCTGTACCATGC...TATGGAACTTAAATGGGCGTTTTCTTGTCCCAGATTCTGGCCTATTTCAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR TCA 90 bp | GGATCTCATTCTATAGCTCAGGCTAGCCCAGAATTCACTATGAAGGCCGGTCTTCTGGCACATCGGTCTTaGCCACATTGCCATTATGGT | + |
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Preference number: 4 (lower is better) Translates to: GSHSIAQASPEFTMKAGLLAHRS*PHCHYG Trigger: ACCATAATGGCAATGTGGTCAAGACCGATGTGCCAG...AAGACCGGCCTTCATAGTGAATTCTGGGCTAGCCTGAGCTATAGAATGAGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS-3UTR GCA 90 bp | CAGCCTGAAATAGGCCAGAATCTGGGACAAGAAAACGCCCATTTAAGTTCCATAGCGGGCACTGCCCACTaGAGTAATTCAGCTGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: QPEIGQNLGQENAHLSSIAGTAH*SNSAGI Trigger: GATACCAGCTGAATTACTGCAGTGGGCAGTGCCCGC...TATGGAACTTAAATGGGCGTTTTCTTGTCCCAGATTCTGGCCTATTTCAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS-3UTR CCA 90 bp | GGTGCTGTAGTTATAAGTGTAAGCCACCACACCCTGTTCCCACTGTACAATGTATTATTCTGGGACGGCTaGTTAGGTGCAGTCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GAVVISVSHHTLFPLYNVLFWDG*LGAVPP Trigger: TGGAGGGACTGCACCTAACCAGCCGTCCCAGAATAA...TACATTGTACAGTGGGAACAGGGTGTGGTGGCTTACACTTATAACTACAGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS-3UTR CCA 90 bp | GGTGCTGTAGTTATAAGTGTAAGCCACCACACCCTGTTCCCACTGTACAATGTACCAGAGGAAGTGGTTTaGTGCTCAGCTAGGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GAVVISVSHHTLFPLYNVPEEVV*CSARKV Trigger: CACCTTCCTAGCTGAGCACCAAACCACTTCCTCTGG...TACATTGTACAGTGGGAACAGGGTGTGGTGGCTTACACTTATAACTACAGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS-3UTR CCA 90 bp | ATAGGCCAGAATCTGGGACAAGAAAACGCCCATTTAAGTTCCATAGGGGTCAAAGCCAGCCAGAGGAAGTaGTTTGGTGCTCAGCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IGQNLGQENAHLSSIGVKASQRK*FGAQLG Trigger: TCCTAGCTGAGCACCAAACCACTTCCTCTGGCTGGC...TTTGACCCCTATGGAACTTAAATGGGCGTTTTCTTGTCCCAGATTCTGGCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS-3UTR GCA 90 bp | GTAGTTATAAGTGTAAGCCACCACACCCTGTTCCCACTGTACAATGTAAAGATACCCTCCAGGATTTGCTaGTTGGCTAGCTCCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: VVISVSHHTLFPLYNVKIPSRIC*LASSRT Trigger: GGTCCTGGAGCTAGCCAAGCAGCAAATCCTGGAGGG...TATCTTTACATTGTACAGTGGGAACAGGGTGTGGTGGCTTACACTTATAACTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| 3UTR CAA 72 bp | CCCTTGAAAGGCAACGCTTTACCCATCTGTCCACATTaGAAACAGCCTGAAATAGGCCAGAATCTGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: PLKGNALPICPH*KQPEIGQNLGQ Trigger: TTGTCCCAGATTCTGGCCTATTTCAGGCTGTTTCAAATGTGGACAGATGGGTAAAGCGTTGCCTTTCAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS-3UTR TCA 90 bp | ATAGGCCAGAATCTGGGACAAGAAAACGCCCATTTAAGTTCCATAGGGGTCAAACATGGAGCGGTAGGTTaGAGTGGATTTGTCTATGAT | + |
|
Preference number: 4 (lower is better) Translates to: IGQNLGQENAHLSSIGVKHGAVG*SGFVYD Trigger: ATCATAGACAAATCCACTTCAACCTACCGCTCCATG...TTTGACCCCTATGGAACTTAAATGGGCGTTTTCTTGTCCCAGATTCTGGCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS GCA 90 bp | CCAGAGTCCTCACTCCGCAAGCCGCTAGAGGGCAGAGTCAGGGCGTaGCAGCCAGAGGAAGTGGTTTGGTGCTCAGCTAGGAAGGTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PESSLRKPLEGRVRA*QPEEVVWCSARKVR Trigger: CCGCACCTTCCTAGCTGAGCACCAAACCACTTCCTCTGGCTGGCACGCCCTGACTCTGCCCTCTAGCGGCTTGCGGAGTGAGGACTCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS GCA 90 bp | AAGCTGATGACTTTCTCTCGGTTGCCAGGGACCATGCTCTTGGGCTaGAGTCTCCGGAGGGCTCTGGTCAGTGCTGCCTGGGGCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KLMTFSRLPGTMLLG*SLRRALVSAAWGRG Trigger: GCCTCTGCCCCAGGCAGCACTGACCAGAGCCCTCCGGAGACTGCAGCCCAAGAGCATGGTCCCTGGCAACCGAGAGAAAGTCATCAGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS GCA 90 bp | CTAGAGGGCAGAGTCAGGGCGTGCCAGCCAGAGGAAGTGGTTTGGTaGTCAGCTAGGAAGGTGCGGAATCCTCGGCACCTAGTGGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LEGRVRACQPEEVVW*SARKVRNPRHLVVP Trigger: CGGCACCACTAGGTGCCGAGGATTCCGCACCTTCCTAGCTGAGCACCAAACCACTTCCTCTGGCTGGCACGCCCTGACTCTGCCCTCTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CCA 90 bp | AGGATTTGCTGCTTGGCTAGCTCCAGGACCAGAGCGCGTTCTCCTTaGGGTGCCAGTGTTGGGCCCCCACAGGACGGGCACGCAGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RICCLASSRTRARSP*GASVGPPQDGHADL Trigger: AAGATCTGCGTGCCCGTCCTGTGGGGGCCCAACACTGGCACCCCAAGGAGAACGCGCTCTGGTCCTGGAGCTAGCCAAGCAGCAAATCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CCA 90 bp | GGAGGGCTCTGGTCAGTGCTGCCTGGGGCAGAGGCCGAGTTATTCTaGGACGGCTGGTTAGGTGCAGTCCCTCCAGGATTTGCTGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGLWSVLPGAEAELF*DGWLGAVPPGFAAW Trigger: CCAAGCAGCAAATCCTGGAGGGACTGCACCTAACCAGCCGTCCCAGAATAACTCGGCCTCTGCCCCAGGCAGCACTGACCAGAGCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CCA 90 bp | ATGCTCTTGGGCTGCAGTCTCCGGAGGGCTCTGGTCAGTGCTGCCTaGGGCAGAGGCCGAGTTATTCTGGGACGGCTGGTTAGGTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: MLLGCSLRRALVSAA*GRGRVILGRLVRCS Trigger: ACTGCACCTAACCAGCCGTCCCAGAATAACTCGGCCTCTGCCCCAGGCAGCACTGACCAGAGCCCTCCGGAGACTGCAGCCCAAGAGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS GCA 90 bp | GCCAGTGTTGGGCCCCCACAGGACGGGCACGCAGATCTTGTACTCTaGACCCACACCAATGCCCACAGCAGTATTAGCCAGAGCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASVGPPQDGHADLVL*THTNAHSSISQSWA Trigger: AGCCCAGCTCTGGCTAATACTGCTGTGGGCATTGGTGTGGGTGCAGAGTACAAGATCTGCGTGCCCGTCCTGTGGGGGCCCAACACTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS GCA 90 bp | GCTGCCTGGGGCAGAGGCCGAGTTATTCTGGGACGGCTGGTTAGGTaGAGTCCCTCCAGGATTTGCTGCTTGGCTAGCTCCAGGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AAWGRGRVILGRLVR*SPSRICCLASSRTR Trigger: TCTGGTCCTGGAGCTAGCCAAGCAGCAAATCCTGGAGGGACTGCACCTAACCAGCCGTCCCAGAATAACTCGGCCTCTGCCCCAGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS GCA 90 bp | CGGAAGATCCTCAGGTACAGAGTGCCCGGAAAAGAGGGAGGCACATaGAGCCAGAGGCGGGCATGGTACAGGTGGTGGGACCAAAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RKILRYRVPGKEGGT*SQRRAWYRWWDQRG Trigger: CCCTCTTTGGTCCCACCACCTGTACCATGCCCGCCTCTGGCTGCATGTGCCTCCCTCTTTTCCGGGCACTCTGTACCTGAGGATCTTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CCA 90 bp | TTCTGGGACGGCTGGTTAGGTGCAGTCCCTCCAGGATTTGCTGCTTaGCTAGCTCCAGGACCAGAGCGCGTTCTCCTTGGGGTGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FWDGWLGAVPPGFAA*LAPGPERVLLGVPV Trigger: CACTGGCACCCCAAGGAGAACGCGCTCTGGTCCTGGAGCTAGCCAAGCAGCAAATCCTGGAGGGACTGCACCTAACCAGCCGTCCCAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS GCA 90 bp | GTTATTCTGGGACGGCTGGTTAGGTGCAGTCCCTCCAGGATTTGCTaGTTGGCTAGCTCCAGGACCAGAGCGCGTTCTCCTTGGGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VILGRLVRCSPSRIC*LASSRTRARSPWGA Trigger: GGCACCCCAAGGAGAACGCGCTCTGGTCCTGGAGCTAGCCAAGCAGCAAATCCTGGAGGGACTGCACCTAACCAGCCGTCCCAGAATAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CCA 90 bp | TGGTCAGTGCTGCCTGGGGCAGAGGCCGAGTTATTCTGGGACGGCTaGTTAGGTGCAGTCCCTCCAGGATTTGCTGCTTGGCTAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WSVLPGAEAELFWDG*LGAVPPGFAAWLAP Trigger: TGGAGCTAGCCAAGCAGCAAATCCTGGAGGGACTGCACCTAACCAGCCGTCCCAGAATAACTCGGCCTCTGCCCCAGGCAGCACTGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS-3UTR CAA 90 bp | GGTGGTGGTGGTGGTGGTGGAGGAGAGATGGCTCCACTAGGGATGCTTGTTTTTCCAGGGACCATGCTCTaGGGCTGCAGTCTCCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGGGGGGGEMAPLGMLVFPGTML*GCSLRR Trigger: CCTCCGGAGACTGCAGCCCAAGAGCATGGTCCCTGG...AAAAACAAGCATCCCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS-3UTR CAA 90 bp | TGGTGGTGGTGGTGGTGGTGGTGGAGGAGAGATGGCTCCACTAGGGATGCTTGTCCCGCAGGCCAAGGGTaGTTGGCTTTGAGGAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: WWWWWWWWRRDGSTRDACPAGQG*LALRRL Trigger: TAGCCTCCTCAAAGCCAACAACCCTTGGCCTGCGGG...ACAAGCATCCCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACCACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS GCA 90 bp | CGAGTTATTCTGGGACGGCTGGTTAGGTGCAGTCCCTCCAGGATTTaGTGCTTGGCTAGCTCCAGGACCAGAGCGCGTTCTCCTTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RVILGRLVRCSPSRI*CLASSRTRARSPWG Trigger: ACCCCAAGGAGAACGCGCTCTGGTCCTGGAGCTAGCCAAGCAGCAAATCCTGGAGGGACTGCACCTAACCAGCCGTCCCAGAATAACTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS GCA 90 bp | GCTCCAGGTTCATTAGCTCGGATCTTAAGTTCCAAGAAGGGACGTTaGTGTCCCGCTGTGTCCAAGAGCAGCCGTGGCAGTCCCGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: APGSLARILSSKKGR*CPAVSKSSRGSPAA Trigger: CGCTGCGGGACTGCCACGGCTGCTCTTGGACACAGCGGGACAGCAACGTCCCTTCTTGGAACTTAAGATCCGAGCTAATGAACCTGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CCA 90 bp | TTCCAAGAAGGGACGTTGCTGTCCCGCTGTGTCCAAGAGCAGCCGTaGCAGTCCCGCAGCGGTGCTGTTAAGGTCCAGGGGTCTAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: FQEGTLLSRCVQEQP*QSRSGAVKVQGSKF Trigger: GAATTTAGACCCCTGGACCTTAACAGCACCGCTGCGGGACTGCCACGGCTGCTCTTGGACACAGCGGGACAGCAACGTCCCTTCTTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS-3UTR CAA 90 bp | TGTGTTCTTCCTTCCCTCCCACGGCATCCCTGCTGTCCTGGAACAGGGCTTGATACGGGCACGCAGATCTaGTACTCTGCACCCACACCA | + |
|
Preference number: 5 (lower is better) Translates to: CVLPSLPRHPCCPGTGLDTGTQI*YSAPTP Trigger: TGGTGTGGGTGCAGAGTACAAGATCTGCGTGCCCGT...ATCAAGCCCTGTTCCAGGACAGCAGGGATGCCGTGGGAGGGAAGGAAGAACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS-3UTR CAA 90 bp | TGGTGGTGGTGGTGGTGGTGGTGGAGGAGAGATGGCTCCACTAGGGATGCTTGTTCCAGGATTTGCTGCTaGGCTAGCTCCAGGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WWWWWWWWRRDGSTRDACSRICC*ASSRTR Trigger: TCTGGTCCTGGAGCTAGCCAAGCAGCAAATCCTGGA...ACAAGCATCCCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CCA 90 bp | TGCCATTATGGTCAAGGTAGAGGAGAGAGAGAGGCCTTCGTGCAGTaGGGACACAGCAGGAAGAACCCGCAGGCCAAGGGTTGTTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CHYGQGRGEREAFVQ*GHSRKNPQAKGCWL Trigger: AAGCCAACAACCCTTGGCCTGCGGGTTCTTCCTGCTGTGTCCCCACTGCACGAAGGCCTCTCTCTCTCCTCTACCTTGACCATAATGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS-3UTR CAA 90 bp | TGGTGGTGGTGGTGGTGGTGGTGGAGGAGAGATGGCTCCACTAGGGATGCTTGTATGACTTTCTCTCGGTaGCCAGGGACCATGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WWWWWWWWRRDGSTRDACMTFSR*PGTMLL Trigger: CAAGAGCATGGTCCCTGGCAACCGAGAGAAAGTCAT...ACAAGCATCCCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS GCA 90 bp | CACATTGCCATTATGGTCAAGGTAGAGGAGAGAGAGAGGCCTTCGTaGAGTGGGGACACAGCAGGAAGAACCCGCAGGCCAAGGGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HIAIMVKVEERERPS*SGDTAGRTRRPRVV Trigger: AACAACCCTTGGCCTGCGGGTTCTTCCTGCTGTGTCCCCACTGCACGAAGGCCTCTCTCTCTCCTCTACCTTGACCATAATGGCAATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS-3UTR CAA 90 bp | TGGTGGTGGTGGTGGTGGTGGTGGAGGAGAGATGGCTCCACTAGGGATGCTTGTGGGTCTAAATTCCAGTaGGAGTTTCACGACGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WWWWWWWWRRDGSTRDACGSKFQ*EFHDAR Trigger: TCTGGCGTCGTGAAACTCCAACTGGAATTTAGACCC...ACAAGCATCCCTAGTGGAGCCATCTCTCCTCCACCACCACCACCACCACCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS-3UTR CAA 90 bp | GTAGTTATAAGTGTAAGCCACCACACCCTGTTCCCACTGTACAATGTAAAGATACAGAGCGCGTTCTCCTaGGGGTGCCAGTGTTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VVISVSHHTLFPLYNVKIQSAFS*GCQCWA Trigger: GGCCCAACACTGGCACCCCAAGGAGAACGCGCTCTG...TATCTTTACATTGTACAGTGGGAACAGGGTGTGGTGGCTTACACTTATAACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS-3UTR CAA 90 bp | ATAGGCCAGAATCTGGGACAAGAAAACGCCCATTTAAGTTCCATAGGGGTCAAAGCAGGCCAAGGGTTGTaGGCTTTGAGGAGGCTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: IGQNLGQENAHLSSIGVKAGQGL*ALRRLK Trigger: CTTTAGCCTCCTCAAAGCCAACAACCCTTGGCCTGC...TTTGACCCCTATGGAACTTAAATGGGCGTTTTCTTGTCCCAGATTCTGGCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CCA 72 bp | TGCTTGGCTAGCTCCAGGACCAGAGCGCGTTCTCCTTaGGGTGCCAGTGTTGGGCCCCCACAGGACGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: CLASSRTRARSP*GASVGPPQDGH Trigger: GTGCCCGTCCTGTGGGGGCCCAACACTGGCACCCCAAGGAGAACGCGCTCTGGTCCTGGAGCTAGCCAAGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CCA 72 bp | GGGACGTTGCTGTCCCGCTGTGTCCAAGAGCAGCCGTaGCAGTCCCGCAGCGGTGCTGTTAAGGTCCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GTLLSRCVQEQP*QSRSGAVKVQG Trigger: CCCCTGGACCTTAACAGCACCGCTGCGGGACTGCCACGGCTGCTCTTGGACACAGCGGGACAGCAACGTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS GCA 72 bp | CTTGGGCTGCAGTCTCCGGAGGGCTCTGGTCAGTGCTaGCTGGGGCAGAGGCCGAGTTATTCTGGGACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LGLQSPEGSGQC*LGQRPSYSGTA Trigger: AGCCGTCCCAGAATAACTCGGCCTCTGCCCCAGGCAGCACTGACCAGAGCCCTCCGGAGACTGCAGCCCAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CCA 72 bp | GGCTGCAGTCTCCGGAGGGCTCTGGTCAGTGCTGCCTaGGGCAGAGGCCGAGTTATTCTGGGACGGCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GCSLRRALVSAA*GRGRVILGRLV Trigger: AACCAGCCGTCCCAGAATAACTCGGCCTCTGCCCCAGGCAGCACTGACCAGAGCCCTCCGGAGACTGCAGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CAA 90 bp | TGGCTAGCTCCAGGACCAGAGCGCGTTCTCCTTGGGGTGCCAGTGTaGGGCCCCCACAGGACGGGCACGCAGATCTTGTACTCTGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: WLAPGPERVLLGVPV*GPHRTGTQILYSAP Trigger: GGGTGCAGAGTACAAGATCTGCGTGCCCGTCCTGTGGGGGCCCAACACTGGCACCCCAAGGAGAACGCGCTCTGGTCCTGGAGCTAGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CCA 72 bp | CAGGACCAGAGCGCGTTCTCCTTGGGGTGCCAGTGTTaGGCCCCCACAGGACGGGCACGCAGATCTTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: QDQSAFSLGCQC*APTGRARRSCT Trigger: AGTACAAGATCTGCGTGCCCGTCCTGTGGGGGCCCAACACTGGCACCCCAAGGAGAACGCGCTCTGGTCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CCA 72 bp | GGAGGCACATGCAGCCAGAGGCGGGCATGGTACAGGTaGTGGGACCAAAGAGGGGACAGCTGGAAGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GGTCSQRRAWYR*WDQRGDSWKVS Trigger: GCTCACCTTCCAGCTGTCCCCTCTTTGGTCCCACCACCTGTACCATGCCCGCCTCTGGCTGCATGTGCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CCA 72 bp | GGCACATGCAGCCAGAGGCGGGCATGGTACAGGTGGTaGGACCAAAGAGGGGACAGCTGGAAGGTGAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: GTCSQRRAWYRW*DQRGDSWKVSM Trigger: CATGCTCACCTTCCAGCTGTCCCCTCTTTGGTCCCACCACCTGTACCATGCCCGCCTCTGGCTGCATGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CCA 72 bp | GGCAGAGTCAGGGCGTGCCAGCCAGAGGAAGTGGTTTaGTGCTCAGCTAGGAAGGTGCGGAATCCTCGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GRVRACQPEEVV*CSARKVRNPRH Trigger: GTGCCGAGGATTCCGCACCTTCCTAGCTGAGCACCAAACCACTTCCTCTGGCTGGCACGCCCTGACTCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CAA 90 bp | GTAGCAAAGCTGATGACTTTCTCTCGGTTGCCAGGGACCATGCTCTaGGGCTGCAGTCTCCGGAGGGCTCTGGTCAGTGCTGCCTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VAKLMTFSRLPGTML*GCSLRRALVSAAWG Trigger: GCCCCAGGCAGCACTGACCAGAGCCCTCCGGAGACTGCAGCCCAAGAGCATGGTCCCTGGCAACCGAGAGAAAGTCATCAGCTTTGCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS GCA 72 bp | GGGCCCCCACAGGACGGGCACGCAGATCTTGTACTCTaGACCCACACCAATGCCCACAGCAGTATTAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPPQDGHADLVL*THTNAHSSISQ Trigger: CTGGCTAATACTGCTGTGGGCATTGGTGTGGGTGCAGAGTACAAGATCTGCGTGCCCGTCCTGTGGGGGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS GCA 72 bp | GGACGGCTGGTTAGGTGCAGTCCCTCCAGGATTTGCTaGTTGGCTAGCTCCAGGACCAGAGCGCGTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GRLVRCSPSRIC*LASSRTRARSP Trigger: AGGAGAACGCGCTCTGGTCCTGGAGCTAGCCAAGCAGCAAATCCTGGAGGGACTGCACCTAACCAGCCGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS GCA 72 bp | CTGGGACGGCTGGTTAGGTGCAGTCCCTCCAGGATTTaGTGCTTGGCTAGCTCCAGGACCAGAGCGCGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGRLVRCSPSRI*CLASSRTRARS Trigger: AGAACGCGCTCTGGTCCTGGAGCTAGCCAAGCAGCAAATCCTGGAGGGACTGCACCTAACCAGCCGTCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CCA 72 bp | GGCTGGTTAGGTGCAGTCCCTCCAGGATTTGCTGCTTaGCTAGCTCCAGGACCAGAGCGCGTTCTCCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GWLGAVPPGFAA*LAPGPERVLLG Trigger: CCCAAGGAGAACGCGCTCTGGTCCTGGAGCTAGCCAAGCAGCAAATCCTGGAGGGACTGCACCTAACCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CCA 72 bp | CTGCCTGGGGCAGAGGCCGAGTTATTCTGGGACGGCTaGTTAGGTGCAGTCCCTCCAGGATTTGCTGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPGAEAELFWDG*LGAVPPGFAAW Trigger: CCAAGCAGCAAATCCTGGAGGGACTGCACCTAACCAGCCGTCCCAGAATAACTCGGCCTCTGCCCCAGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
||
| CDS CCA 72 bp | GGTCAAGGTAGAGGAGAGAGAGAGGCCTTCGTGCAGTaGGGACACAGCAGGAAGAACCCGCAGGCCAAGGGT | + |
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Preference number: 6 (lower is better) Translates to: GQGRGEREAFVQ*GHSRKNPQAKG Trigger: ACCCTTGGCCTGCGGGTTCTTCCTGCTGTGTCCCCACTGCACGAAGGCCTCTCTCTCTCCTCTACCTTGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS CAA 72 bp | CCAGTGTTGGGCCCCCACAGGACGGGCACGCAGATCTaGTACTCTGCACCCACACCAATGCCCACAGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: PVLGPHRTGTQI*YSAPTPMPTAV Trigger: TACTGCTGTGGGCATTGGTGTGGGTGCAGAGTACAAGATCTGCGTGCCCGTCCTGTGGGGGCCCAACACTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS CAA 72 bp | CGGCTGGTTAGGTGCAGTCCCTCCAGGATTTGCTGCTaGGCTAGCTCCAGGACCAGAGCGCGTTCTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: RLVRCSPSRICC*ASSRTRARSPW Trigger: CCAAGGAGAACGCGCTCTGGTCCTGGAGCTAGCCAAGCAGCAAATCCTGGAGGGACTGCACCTAACCAGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS CAA 90 bp | CTTGGGGTGCCAGTGTTGGGCCCCCACAGGACGGGCACGCAGATCTaGTACTCTGCACCCACACCAATGCCCACAGCAGTATTAGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: LGVPVLGPHRTGTQI*YSAPTPMPTAVLAR Trigger: TCTGGCTAATACTGCTGTGGGCATTGGTGTGGGTGCAGAGTACAAGATCTGCGTGCCCGTCCTGTGGGGGCCCAACACTGGCACCCCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS CAA 90 bp | ATTCTGGGACGGCTGGTTAGGTGCAGTCCCTCCAGGATTTGCTGCTaGGCTAGCTCCAGGACCAGAGCGCGTTCTCCTTGGGGTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: ILGRLVRCSPSRICC*ASSRTRARSPWGAS Trigger: ACTGGCACCCCAAGGAGAACGCGCTCTGGTCCTGGAGCTAGCCAAGCAGCAAATCCTGGAGGGACTGCACCTAACCAGCCGTCCCAGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS GCA 72 bp | GGCAGAGGCCGAGTTATTCTGGGACGGCTGGTTAGGTaGAGTCCCTCCAGGATTTGCTGCTTGGCTAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GRGRVILGRLVR*SPSRICCLASS Trigger: GGAGCTAGCCAAGCAGCAAATCCTGGAGGGACTGCACCTAACCAGCCGTCCCAGAATAACTCGGCCTCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS CCA 72 bp | TGGTCAGTGCTGCCTGGGGCAGAGGCCGAGTTATTCTaGGACGGCTGGTTAGGTGCAGTCCCTCCAGGATTT | + |
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Preference number: 6 (lower is better) Translates to: WSVLPGAEAELF*DGWLGAVPPGF Trigger: AAATCCTGGAGGGACTGCACCTAACCAGCCGTCCCAGAATAACTCGGCCTCTGCCCCAGGCAGCACTGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS CAA 72 bp | CTGATGACTTTCTCTCGGTTGCCAGGGACCATGCTCTaGGGCTGCAGTCTCCGGAGGGCTCTGGTCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LMTFSRLPGTML*GCSLRRALVSA Trigger: AGCACTGACCAGAGCCCTCCGGAGACTGCAGCCCAAGAGCATGGTCCCTGGCAACCGAGAGAAAGTCATCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS CAA 90 bp | CGTGCAGTGGGGACACAGCAGGAAGAACCCGCAGGCCAAGGGTTGTaGGCTTTGAGGAGGCTAAAGACGGCAGAATGGAAGGAGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RAVGTQQEEPAGQGL*ALRRLKTAEWKEAA Trigger: TGCTGCCTCCTTCCATTCTGCCGTCTTTAGCCTCCTCAAAGCCAACAACCCTTGGCCTGCGGGTTCTTCCTGCTGTGTCCCCACTGCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS CAA 90 bp | TGCTCCAGGTTCATTAGCTCGGATCTTAAGTTCCAAGAAGGGACGTaGCTGTCCCGCTGTGTCCAAGAGCAGCCGTGGCAGTCCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: CSRFISSDLKFQEGT*LSRCVQEQPWQSRS Trigger: GCTGCGGGACTGCCACGGCTGCTCTTGGACACAGCGGGACAGCAACGTCCCTTCTTGGAACTTAAGATCCGAGCTAATGAACCTGGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS CAA 90 bp | CTTCGTGCAGTGGGGACACAGCAGGAAGAACCCGCAGGCCAAGGGTaGTTGGCTTTGAGGAGGCTAAAGACGGCAGAATGGAAGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LRAVGTQQEEPAGQG*LALRRLKTAEWKEA Trigger: TGCCTCCTTCCATTCTGCCGTCTTTAGCCTCCTCAAAGCCAACAACCCTTGGCCTGCGGGTTCTTCCTGCTGTGTCCCCACTGCACGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS CAA 72 bp | GTGGGGACACAGCAGGAAGAACCCGCAGGCCAAGGGTaGTTGGCTTTGAGGAGGCTAAAGACGGCAGAATGG | + |
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Preference number: 6 (lower is better) Translates to: VGTQQEEPAGQG*LALRRLKTAEW Trigger: CCATTCTGCCGTCTTTAGCCTCCTCAAAGCCAACAACCCTTGGCCTGCGGGTTCTTCCTGCTGTGTCCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS GCA 72 bp | AGGCTCACAGGTGGGAGTCCTCCTCCTGGCCCGACCTaGTCCAGGTTCATTAGCTCGGATCTTAAGTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: RLTGGSPPPGPT*SRFISSDLKFQ Trigger: TTGGAACTTAAGATCCGAGCTAATGAACCTGGAGCAGGTCGGGCCAGGAGGAGGACTCCCACCTGTGAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS CAA 72 bp | CAGCAGGAAGAACCCGCAGGCCAAGGGTTGTTGGCTTaGAGGAGGCTAAAGACGGCAGAATGGAAGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: QQEEPAGQGLLA*RRLKTAEWKEA Trigger: TGCCTCCTTCCATTCTGCCGTCTTTAGCCTCCTCAAAGCCAACAACCCTTGGCCTGCGGGTTCTTCCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS GCA 72 bp | TCATTAGCTCGGATCTTAAGTTCCAAGAAGGGACGTTaGTGTCCCGCTGTGTCCAAGAGCAGCCGTGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: SLARILSSKKGR*CPAVSKSSRGS Trigger: ACTGCCACGGCTGCTCTTGGACACAGCGGGACAGCAACGTCCCTTCTTGGAACTTAAGATCCGAGCTAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS CAA 72 bp | TTCATTAGCTCGGATCTTAAGTTCCAAGAAGGGACGTaGCTGTCCCGCTGTGTCCAAGAGCAGCCGTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: FISSDLKFQEGT*LSRCVQEQPWQ Trigger: CTGCCACGGCTGCTCTTGGACACAGCGGGACAGCAACGTCCCTTCTTGGAACTTAAGATCCGAGCTAATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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| CDS TCA 72 bp | AGGGGACAGCTGGAAGGTGAGCATGGAGCGGTAGGTTaGAGTGGATTTGTCTATGATGGTAGCAAAGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: RGQLEGEHGAVG*SGFVYDGSKAD Trigger: ATCAGCTTTGCTACCATCATAGACAAATCCACTTCAACCTACCGCTCCATGCTCACCTTCCAGCTGTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059718.6 |
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