Pregenerated sensors for INHBC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025405Ensembl transcript IDs: ENSMUST00000026472.10
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTTTTGGTCAAATTCAGCTGGAAACTAGAGGAATGTCCAACCAATaGGACTTGGTATGTCACCCCCGAGGGCAGAAGAGGGCAGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: PFGQIQLETRGMSNQ*DLVCHPRGQKRAEN Trigger: GTTCTCTGCCCTCTTCTGCCCTCGGGGGTGACATACCAAGTCTCATTGGTTGGACATTCCTCTAGTTTCCAGCTGAATTTGACCAAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| 3UTR CCA 90 bp | GTCAAATTCAGCTGGAAACTAGAGGAATGTCCAACCAATGAGACTTaGTATGTCACCCCCGAGGGCAGAAGAGGGCAGAGAACACTATTT | + |
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Preference number: 1 (lower is better) Translates to: VKFSWKLEECPTNET*YVTPEGRRGQRTLF Trigger: AAATAGTGTTCTCTGCCCTCTTCTGCCCTCGGGGGTGACATACCAAGTCTCATTGGTTGGACATTCCTCTAGTTTCCAGCTGAATTTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTGAGGATGGGTGTACTGGGTCAACCATGTCCCAGGAGAGAGAAAGGCTGAGAGTTTCCCCTTCCTaGGGAAGGCCATTCTACCTC | + |
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Preference number: 2 (lower is better) Translates to: KAEDGCTGSTMSQERERLRVSPS*GRPFYL Trigger: GAGGTAGAATGGCCTTCCTCAGGAAGGGGAAACTCT...CAGCCTTTCTCTCTCCTGGGACATGGTTGACCCAGTACACCCATCCTCAGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| 3UTR-3UTR CCA 90 bp | CTGAGGATGGGTGTACTGGGTCAACCATGTCCCAGGAGAGAGAAAGGCTGTTGGCATTCTGGACAGAAGTaGGAACAGAGTTTCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LRMGVLGQPCPRREKGCWHSGQK*EQSFPF Trigger: GAAGGGGAAACTCTGTTCCCACTTCTGTCCAGAATG...CCAACAGCCTTTCTCTCTCCTGGGACATGGTTGACCCAGTACACCCATCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGAGCCACTATGCCTGATGGAGTTTTTCTGTGTTATCCTAGGCTTTAGTTTCAGAGAGAAAGGCTGTTaGTCACTAGTGACTCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: CEPLCLMEFFCVILGFSFREKGC*SLVTLF Trigger: AAAGAGAGTCACTAGTGACCAACAGCCTTTCTCTCT...GAAACTAAAGCCTAGGATAACACAGAAAAACTCCATCAGGCATAGTGGCTCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGAGCCACTATGCCTGATGGAGTTTTTCTGTGTTATCCTAGGCTTTAGTTTCTTGGTCAAATTCAGCTaGAAACTAGAGGAATGTCCA | + |
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Preference number: 2 (lower is better) Translates to: CEPLCLMEFFCVILGFSFLVKFS*KLEECP Trigger: TGGACATTCCTCTAGTTTCCAGCTGAATTTGACCAA...GAAACTAAAGCCTAGGATAACACAGAAAAACTCCATCAGGCATAGTGGCTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| 3UTR-3UTR CAA 90 bp | ACCCAGGCTAGCCTAGAGCTAGCTGGCCTCAGTCTCTCGTGTGCAGGGCTGGACGAGATGAGCCTTTCTTaGGAAGGCAGCAATATAATC | + |
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Preference number: 3 (lower is better) Translates to: TQASLELAGLSLSCAGLDEMSLS*EGSNII Trigger: GATTATATTGCTGCCTTCCAAAGAAAGGCTCATCTC...GTCCAGCCCTGCACACGAGAGACTGAGGCCAGCTAGCTCTAGGCTAGCCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| 3UTR CCA 72 bp | CTGGGTCAACCATGTCCCAGGAGAGAGAAAGGCTGTTaGTCACTAGTGACTCTCTTTAGAGGTGGATCCCCT | + |
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Preference number: 3 (lower is better) Translates to: LGQPCPRREKGC*SLVTLFRGGSP Trigger: AGGGGATCCACCTCTAAAGAGAGTCACTAGTGACCAACAGCCTTTCTCTCTCCTGGGACATGGTTGACCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| 3UTR CCA 72 bp | AGCTGGAAACTAGAGGAATGTCCAACCAATGAGACTTaGTATGTCACCCCCGAGGGCAGAAGAGGGCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: SWKLEECPTNET*YVTPEGRRGQR Trigger: TCTCTGCCCTCTTCTGCCCTCGGGGGTGACATACCAAGTCTCATTGGTTGGACATTCCTCTAGTTTCCAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| 3UTR TCA 72 bp | ATTCTGGACAGAAGTGGGAACAGAGTTTCCCCTTCCTaGGGAAGGCCATTCTACCTCAGGCAGCCTGTATCA | + |
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Preference number: 3 (lower is better) Translates to: ILDRSGNRVSPS*GRPFYLRQPVS Trigger: TGATACAGGCTGCCTGAGGTAGAATGGCCTTCCTCAGGAAGGGGAAACTCTGTTCCCACTTCTGTCCAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| 3UTR GCA 72 bp | GGTGGATCCCCTGAAGTCCACAGAGGGATGTCTGCATaGTTAGAAAGGTGTTTCCATTCTGGACAGAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: GGSPEVHRGMSA*LERCFHSGQKW Trigger: CCACTTCTGTCCAGAATGGAAACACCTTTCTAAGCATGCAGACATCCCTCTGTGGACTTCAGGGGATCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| 3UTR-3UTR CAA 90 bp | CTTGGTATGTCACCCCCGAGGGCAGAAGAGGGCAGAGAACACTATTTAGTAGCAGAGAGAGAAAGGCTGTaGGTCACTAGTGACTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: LGMSPPRAEEGREHYLVAERERL*VTSDSL Trigger: AAGAGAGTCACTAGTGACCAACAGCCTTTCTCTCTC...TGCTACTAAATAGTGTTCTCTGCCCTCTTCTGCCCTCGGGGGTGACATACCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| 3UTR TCA 72 bp | CAAATTCAGCTGGAAACTAGAGGAATGTCCAACCAATaGGACTTGGTATGTCACCCCCGAGGGCAGAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: QIQLETRGMSNQ*DLVCHPRGQKR Trigger: CCTCTTCTGCCCTCGGGGGTGACATACCAAGTCTCATTGGTTGGACATTCCTCTAGTTTCCAGCTGAATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| 3UTR TCA 72 bp | CTCAGTCTCTCGTGTGCAGGGCTGGACTTGTCCATGTaGGCCACTATGCCTGATGGAGTTTTTCTGTGTTAT | + |
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Preference number: 3 (lower is better) Translates to: LSLSCAGLDLSM*ATMPDGVFLCY Trigger: ATAACACAGAAAAACTCCATCAGGCATAGTGGCTCACATGGACAAGTCCAGCCCTGCACACGAGAGACTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| 3UTR CCA 72 bp | GCATGCTTAGAAAGGTGTTTCCATTCTGGACAGAAGTaGGAACAGAGTTTCCCCTTCCTGAGGAAGGCCATT | + |
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Preference number: 3 (lower is better) Translates to: ACLERCFHSGQK*EQSFPFLRKAI Trigger: AATGGCCTTCCTCAGGAAGGGGAAACTCTGTTCCCACTTCTGTCCAGAATGGAAACACCTTTCTAAGCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| 3UTR CCA 72 bp | GTTTCCAACTGGAGTCTCCTTTTGGTCAAATTCAGCTaGAAACTAGAGGAATGTCCAACCAATGAGACTTGG | + |
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Preference number: 3 (lower is better) Translates to: VSNWSLLLVKFS*KLEECPTNETW Trigger: CCAAGTCTCATTGGTTGGACATTCCTCTAGTTTCCAGCTGAATTTGACCAAAAGGAGACTCCAGTTGGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR GCA 90 bp | CTGAGGATGGGTGTACTGGGTCAACCATGTCCCAGGAGAGAGAAAGGCTGTTGGCGCAGCACGAGCCCCTaGCAGTGGTGCCAGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LRMGVLGQPCPRREKGCWRSTSP*QWCQQL Trigger: CAGCTGCTGGCACCACTGGCAGGGGCTCGTGCTGCG...CCAACAGCCTTTCTCTCTCCTGGGACATGGTTGACCCAGTACACCCATCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR TCA 90 bp | AAGGCTGAGGATGGGTGTACTGGGTCAACCATGTCCCAGGAGAGAGAAAGGCTGCGAGCCGGGTCTGGTTaGTGCTGGAGAGGTCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: KAEDGCTGSTMSQERERLRAGSG*CWRGLC Trigger: ACACAGACCTCTCCAGCATCAACCAGACCCGGCTCG...CAGCCTTTCTCTCTCCTGGGACATGGTTGACCCAGTACACCCATCCTCAGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR GCA 90 bp | ACCCAGGCTAGCCTAGAGCTAGCTGGCCTCAGTCTCTCGTGTGCAGGGCTGGACACATGTAGTGGGCACTaGCCAGTGCAGAAGTTCATG | + |
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Preference number: 4 (lower is better) Translates to: TQASLELAGLSLSCAGLDTCSGH*PVQKFM Trigger: CATGAACTTCTGCACTGGGCAGTGCCCACTACATGT...GTCCAGCCCTGCACACGAGAGACTGAGGCCAGCTAGCTCTAGGCTAGCCTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR CCA 90 bp | AAGGCTGAGGATGGGTGTACTGGGTCAACCATGTCCCAGGAGAGAGAAAGGCTGGTCGACAGCACATCCTaGACGCCCCCTGGCAATCGA | + |
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Preference number: 4 (lower is better) Translates to: KAEDGCTGSTMSQERERLVDSTS*TPPGNR Trigger: TCGATTGCCAGGGGGCGTCCAGGATGTGCTGTCGAC...CAGCCTTTCTCTCTCCTGGGACATGGTTGACCCAGTACACCCATCCTCAGCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR CCA 90 bp | AGGGCAGAAGAGGGCAGAGAACACTATTTAGTAGCACATCTGGGCTCGGGTCTCCTGAGTATGGGGCGCTaGCTGAGGTGCAGCTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: RAEEGREHYLVAHLGSGLLSMGR*LRCSLS Trigger: GGACAAGCTGCACCTCAGCCAGCGCCCCATACTCAG...GAGACCCGAGCCCAGATGTGCTACTAAATAGTGTTCTCTGCCCTCTTCTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR CCA 90 bp | CTGAGGATGGGTGTACTGGGTCAACCATGTCCCAGGAGAGAGAAAGGCTGTTGGGAACTGTGGGCCACCTaGCTTTCTGGTACCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LRMGVLGQPCPRREKGCWELWAT*LSGTSS Trigger: GGAGCTGGTACCAGAAAGCCAGGTGGCCCACAGTTC...CCAACAGCCTTTCTCTCTCCTGGGACATGGTTGACCCAGTACACCCATCCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR GCA 90 bp | GTCACCCCCGAGGGCAGAAGAGGGCAGAGAACACTATTTAGTAGCACATCTGGGAACCCTTACCTGGGCTaGCACAAAAGGCCTGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: VTPEGRRGQRTLFSSTSGNPYLG*HKRPVG Trigger: TCCCACAGGCCTTTTGTGGCAGCCCAGGTAAGGGTT...CCCAGATGTGCTACTAAATAGTGTTCTCTGCCCTCTTCTGCCCTCGGGGGTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR GCA 90 bp | AGGGCAGAAGAGGGCAGAGAACACTATTTAGTAGCACATCTGGGCTCGGGTCTCCAGAGATGCCAGGCATaGCTGCCACATGTAGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: RAEEGREHYLVAHLGSGLQRCQA*LPHVVG Trigger: GCCCACTACATGTGGCAGGCATGCCTGGCATCTCTG...GAGACCCGAGCCCAGATGTGCTACTAAATAGTGTTCTCTGCCCTCTTCTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR TCA 90 bp | GTCACCCCCGAGGGCAGAAGAGGGCAGAGAACACTATTTAGTAGCACATCTGGGACCTGCACCACGTACTaGCTTGTCAAGGTGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: VTPEGRRGQRTLFSSTSGTCTTY*LVKVRL Trigger: CAACCTCACCTTGACAAGTCAGTACGTGGTGCAGGT...CCCAGATGTGCTACTAAATAGTGTTCTCTGCCCTCTTCTGCCCTCGGGGGTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR CCA 90 bp | GTCACCCCCGAGGGCAGAAGAGGGCAGAGAACACTATTTAGTAGCACATCTGGGCCAACATGCTGGGCATaGACCCTCAGTTTTGGGGTT | + |
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Preference number: 4 (lower is better) Translates to: VTPEGRRGQRTLFSSTSGPTCWA*TLSFGV Trigger: AACCCCAAAACTGAGGGTCCATGCCCAGCATGTTGG...CCCAGATGTGCTACTAAATAGTGTTCTCTGCCCTCTTCTGCCCTCGGGGGTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR CCA 90 bp | AGGGCAGAAGAGGGCAGAGAACACTATTTAGTAGCACATCTGGGCTCGGGTCTCGCCACAAAAGGCCTGTaGGAAAACCAGCCCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: RAEEGREHYLVAHLGSGLATKGL*ENQPRI Trigger: GATCCTGGGCTGGTTTTCCCACAGGCCTTTTGTGGC...GAGACCCGAGCCCAGATGTGCTACTAAATAGTGTTCTCTGCCCTCTTCTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR CCA 90 bp | CTTGGTATGTCACCCCCGAGGGCAGAAGAGGGCAGAGAACACTATTTAGTAGCACCCTCAACCCTTACCTaGGCTGCCACAAAAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LGMSPPRAEEGREHYLVAPSTLT*AATKGL Trigger: CAGGCCTTTTGTGGCAGCCCAGGTAAGGGTTGAGGG...TGCTACTAAATAGTGTTCTCTGCCCTCTTCTGCCCTCGGGGGTGACATACCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR CCA 90 bp | AGCAATATAATCTTCAGTGACCCTGATGAAGGGGTTCTTCGGAGAGCCACAGAAACGAGCCCCTGCCAGTaGTGCCAGCAGCTGCGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SNIIFSDPDEGVLRRATETSPCQ*CQQLRW Trigger: CCAACGCAGCTGCTGGCACCACTGGCAGGGGCTCGT...TTCTGTGGCTCTCCGAAGAACCCCTTCATCAGGGTCACTGAAGATTATATTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR GCA 90 bp | AGAAGAGGGCAGAGAACACTATTTAGTAGCACATCTGGGCTCGGGTCTCCAGATGGGCGCTGGCTGAGGTaGAGCTTGTCCAGGATACTT | + |
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Preference number: 4 (lower is better) Translates to: RRGQRTLFSSTSGLGSPDGRWLR*SLSRIL Trigger: AAGTATCCTGGACAAGCTGCACCTCAGCCAGCGCCC...ATCTGGAGACCCGAGCCCAGATGTGCTACTAAATAGTGTTCTCTGCCCTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR CCA 90 bp | TCACTAGTGACTCTCTTTAGAGGTGGATCCCCTGAAGTCCACAGAGGGATGTCTGGTCCCAGGAGAAGCTaGTACCAGCCACTGGCATTC | + |
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Preference number: 4 (lower is better) Translates to: SLVTLFRGGSPEVHRGMSGPRRS*YQPLAF Trigger: GAATGCCAGTGGCTGGTACCAGCTTCTCCTGGGACC...AGACATCCCTCTGTGGACTTCAGGGGATCCACCTCTAAAGAGAGTCACTAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR CCA 90 bp | TCAGTGACCCTGATGAAGGGGTTCTTCGGAGAGCCACAGAATTCAAGGGGAGACAGGATCAAGGAACTGTaGGCCACCTGGCTTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SVTLMKGFFGEPQNSRGDRIKEL*ATWLSG Trigger: ACCAGAAAGCCAGGTGGCCCACAGTTCCTTGATCCT...GTCTCCCCTTGAATTCTGTGGCTCTCCGAAGAACCCCTTCATCAGGGTCACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR CCA 90 bp | CTGAGGATGGGTGTACTGGGTCAACCATGTCCCAGGAGAGAGAAAGGCTGTTGGTGGGGTTCACTACTGTaGTTGGAGTCAGGAACAGAA | + |
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Preference number: 4 (lower is better) Translates to: LRMGVLGQPCPRREKGCWWGSLL*LESGTE Trigger: TTCTGTTCCTGACTCCAACCACAGTAGTGAACCCCA...CCAACAGCCTTTCTCTCTCCTGGGACATGGTTGACCCAGTACACCCATCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR TCA 90 bp | TTCCTTCTTTTACTTTGTGACAAAGGTCTTAATGGCATAACCCAGGCTAGCCTAGTATGGGGCGCTGGCTaGGGTGCAGCTTGTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: FLLLLCDKGLNGITQASLVWGAG*GAACPG Trigger: TCCTGGACAAGCTGCACCTCAGCCAGCGCCCCATAC...TAGGCTAGCCTGGGTTATGCCATTAAGACCTTTGTCACAAAGTAAAAGAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR TCA 90 bp | CTAGTGACTCTCTTTAGAGGTGGATCCCCTGAAGTCCACAGAGGGATGTCTGCACAGGTATATCCGTCTTaGCAATGTTGCTGTCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: LVTLFRGGSPEVHRGMSAQVYPS*QCCCPC Trigger: ACAGGGACAGCAACATTGTCAAGACGGATATACCTG...TGCAGACATCCCTCTGTGGACTTCAGGGGATCCACCTCTAAAGAGAGTCACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR CCA 90 bp | AGGGATGTCTGCATGCTTAGAAAGGTGTTTCCATTCTGGACAGAAGTGGGAACAAGAAGCAGCTCCCGCTaGCTCTCCAGGTCAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: RDVCMLRKVFPFWTEVGTRSSSR*LSRSKM Trigger: CATCTTTGACCTGGAGAGCCAGCGGGAGCTGCTTCT...TGTTCCCACTTCTGTCCAGAATGGAAACACCTTTCTAAGCATGCAGACATCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR TCA 90 bp | TCACTAGTGACTCTCTTTAGAGGTGGATCCCCTGAAGTCCACAGAGGGATGTCTACTGACTTGTCAAGGTaGGGTTGGTGTCATATGGTC | + |
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Preference number: 4 (lower is better) Translates to: SLVTLFRGGSPEVHRGMSTDLSR*GWCHMV Trigger: GACCATATGACACCAACCTCACCTTGACAAGTCAGT...AGACATCCCTCTGTGGACTTCAGGGGATCCACCTCTAAAGAGAGTCACTAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR TCA 90 bp | TGTGAGCCACTATGCCTGATGGAGTTTTTCTGTGTTATCCTAGGCTTTAGTTTCTGGCTGCAAGCAGCTTaGGCTTCAGGTCCCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: CEPLCLMEFFCVILGFSFWLQAA*ASGPRR Trigger: TCTCCTGGGACCTGAAGCTCAAGCTGCTTGCAGCCA...GAAACTAAAGCCTAGGATAACACAGAAAAACTCCATCAGGCATAGTGGCTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR TCA 90 bp | AGCAATATAATCTTCAGTGACCCTGATGAAGGGGTTCTTCGGAGAGCCACAGAAAGCCTTCAGGCTGGATaGTCCAGTCATTCCAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: SNIIFSDPDEGVLRRATESLQAG*SSHSSQ Trigger: TTGGCTGGAATGACTGGATCATCCAGCCTGAAGGCT...TTCTGTGGCTCTCCGAAGAACCCCTTCATCAGGGTCACTGAAGATTATATTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR GCA 90 bp | AGAAAGGTGTTTCCATTCTGGACAGAAGTGGGAACAGAGTTTCCCCTTCCTGAGTCTTGTCTCTGGTCATaGTCCAACAGGGTTTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: RKVFPFWTEVGTEFPLPESCLWS*SNRVSR Trigger: ACGGGAAACCCTGTTGGAGCATGACCAGAGACAAGA...CTCAGGAAGGGGAAACTCTGTTCCCACTTCTGTCCAGAATGGAAACACCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR GCA 90 bp | AGCAATATAATCTTCAGTGACCCTGATGAAGGGGTTCTTCGGAGAGCCACAGAAAGTGGTGCCAGCAGCTaGGTTGGCTTTGAGCAGATT | + |
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Preference number: 4 (lower is better) Translates to: SNIIFSDPDEGVLRRATESGASS*VGFEQI Trigger: AATCTGCTCAAAGCCAACGCAGCTGCTGGCACCACT...TTCTGTGGCTCTCCGAAGAACCCCTTCATCAGGGTCACTGAAGATTATATTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR CCA 90 bp | AGAAAGGTGTTTCCATTCTGGACAGAAGTGGGAACAGAGTTTCCCCTTCCTGAGATGGACCCTCAGTTTTaGGGTTCACTACTGTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: RKVFPFWTEVGTEFPLPEMDPQF*GSLLWL Trigger: CAACCACAGTAGTGAACCCCAAAACTGAGGGTCCAT...CTCAGGAAGGGGAAACTCTGTTCCCACTTCTGTCCAGAATGGAAACACCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR CCA 90 bp | TGGAATAGGAACCTTCCGGTGGCAGGGTCAGGGAGGCAGAGTAGATTACATAGTTATTCTTCTTGTCTCTaGTCATGCTCCAACAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: WNRNLPVAGSGRQSRLHSYSSCL*SCSNRV Trigger: AACCCTGTTGGAGCATGACCAGAGACAAGAAGAATA...ACTATGTAATCTACTCTGCCTCCCTGACCCTGCCACCGGAAGGTTCCTATTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR CCA 90 bp | TGTGAGCCACTATGCCTGATGGAGTTTTTCTGTGTTATCCTAGGCTTTAGTTTCGGCCACCTGGCTTTCTaGTACCAGCTCCAGAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: CEPLCLMEFFCVILGFSFGHLAF*YQLQSK Trigger: CTTACTCTGGAGCTGGTACCAGAAAGCCAGGTGGCC...GAAACTAAAGCCTAGGATAACACAGAAAAACTCCATCAGGCATAGTGGCTCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR GCA 90 bp | TTCCTTCTTTTACTTTGTGACAAAGGTCTTAATGGCATAACCCAGGCTAGCCTAGAAAGGAGGCAGAGATaGCAGGCATGCCTGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: FLLLLCDKGLNGITQASLERRQR*QACLPH Trigger: ATGTGGCAGGCATGCCTGGCATCTCTGCCTCCTTTC...TAGGCTAGCCTGGGTTATGCCATTAAGACCTTTGTCACAAAGTAAAAGAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR CCA 90 bp | ATCCTAGGCTTTAGTTTCCAACTGGAGTCTCCTTTTGGTCAAATTCAGCTGGAACAGTGCAGAAGTTCATaGCATAGCCTTCAGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: ILGFSFQLESPFGQIQLEQCRSS*HSLQAG Trigger: TCCAGCCTGAAGGCTATGCCATGAACTTCTGCACTG...TTCCAGCTGAATTTGACCAAAAGGAGACTCCAGTTGGAAACTAAAGCCTAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| 3UTR CAA 72 bp | AGAGCTAAGGGTGTGTTTGCCAGGAACAAAATGACATaGCTTGTGGTAGGCAGTCGATTAGCCTCTAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RAKGVFARNKMT*LVVGSRLASSL Trigger: TAAGCTAGAGGCTAATCGACTGCCTACCACAAGCAATGTCATTTTGTTCCTGGCAAACACACCCTTAGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS-3UTR CCA 90 bp | TTCCTTCTTTTACTTTGTGACAAAGGTCTTAATGGCATAACCCAGGCTAGCCTAGTTCACTACTGTGGTTaGAGTCAGGAACAGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLLLLCDKGLNGITQASLVHYCG*SQEQKS Trigger: GCTCTTCTGTTCCTGACTCCAACCACAGTAGTGAAC...TAGGCTAGCCTGGGTTATGCCATTAAGACCTTTGTCACAAAGTAAAAGAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CCA 90 bp | CCCGCGGAGGCGCTGCAGCGCGGTCTTGAGAGCCCCTCTGGACACTaGCCGACTGAGTATGGGGCGCTGGCTGAGGTGCAGCTTGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PAEALQRGLESPSGH*PTEYGALAEVQLVQ Trigger: CTGGACAAGCTGCACCTCAGCCAGCGCCCCATACTCAGTCGGCCAGTGTCCAGAGGGGCTCTCAAGACCGCGCTGCAGCGCCTCCGCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS GCA 90 bp | ATCCTGGACGCCCCCTGGCAATCGATACCTCGCCGGCGAACCCGATaGTTGCCCTCAACCCTTACCTGGGCTGCCACAAAAGGCCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILDAPWQSIPRRRTR*LPSTLTWAATKGLW Trigger: CCACAGGCCTTTTGTGGCAGCCCAGGTAAGGGTTGAGGGCAAGCATCGGGTTCGCCGGCGAGGTATCGATTGCCAGGGGGCGTCCAGGAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS GCA 90 bp | TGGACGCCCCCTGGCAATCGATACCTCGCCGGCGAACCCGATGCTTaGCCTCAACCCTTACCTGGGCTGCCACAAAAGGCCTGTGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: WTPPGNRYLAGEPDA*PQPLPGLPQKACGK Trigger: TTTCCCACAGGCCTTTTGTGGCAGCCCAGGTAAGGGTTGAGGGCAAGCATCGGGTTCGCCGGCGAGGTATCGATTGCCAGGGGGCGTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS TCA 90 bp | CGCAGCACGAGCCCCTGCCAGTGGTGCCAGCAGCTGCGTTGGCTTTaGGCAGATTCAGCACTGCAGTGTGAAAGGAGGCAGAGATGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RSTSPCQWCQQLRWL*ADSALQCERRQRCQ Trigger: CTGGCATCTCTGCCTCCTTTCACACTGCAGTGCTGAATCTGCTCAAAGCCAACGCAGCTGCTGGCACCACTGGCAGGGGCTCGTGCTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CCA 90 bp | CGGGTCTGCCGGACCTCCATGCCGCTGGCCATTCTACCAGAGAAGTaGAACTCGAGCCGGGTCTGGTTGATGCTGGAGAGGTCTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RVCRTSMPLAILPEK*NSSRVWLMLERSVS Trigger: TGACACAGACCTCTCCAGCATCAACCAGACCCGGCTCGAGTTCCACTTCTCTGGTAGAATGGCCAGCGGCATGGAGGTCCGGCAGACCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS GCA 90 bp | ACCTCGCCGGCGAACCCGATGCTTGCCCTCAACCCTTACCTGGGCTaGCACAAAAGGCCTGTGGGAAAACCAGCCCAGGATCAAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: TSPANPMLALNPYLG*HKRPVGKPAQDQGT Trigger: AGTTCCTTGATCCTGGGCTGGTTTTCCCACAGGCCTTTTGTGGCAGCCCAGGTAAGGGTTGAGGGCAAGCATCGGGTTCGCCGGCGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS GCA 90 bp | AGATGTAGGCACGCAGCACGAGCCCCTGCCAGTGGTGCCAGCAGCTaGGTTGGCTTTGAGCAGATTCAGCACTGCAGTGTGAAAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RCRHAARAPASGASS*VGFEQIQHCSVKGG Trigger: GCCTCCTTTCACACTGCAGTGCTGAATCTGCTCAAAGCCAACGCAGCTGCTGGCACCACTGGCAGGGGCTCGTGCTGCGTGCCTACATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CCA 90 bp | TCGATACCTCGCCGGCGAACCCGATGCTTGCCCTCAACCCTTACCTaGGCTGCCACAAAAGGCCTGTGGGAAAACCAGCCCAGGATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SIPRRRTRCLPSTLT*AATKGLWENQPRIK Trigger: CTTGATCCTGGGCTGGTTTTCCCACAGGCCTTTTGTGGCAGCCCAGGTAAGGGTTGAGGGCAAGCATCGGGTTCGCCGGCGAGGTATCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CCA 90 bp | GGCCTGTGGGAAAACCAGCCCAGGATCAAGGAACTGTGGGCCACCTaGCTTTCTGGTACCAGCTCCAGAGTAAGGTGTCCCTGGCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GLWENQPRIKELWAT*LSGTSSRVRCPWLQ Trigger: TTGCAGCCAGGGACACCTTACTCTGGAGCTGGTACCAGAAAGCCAGGTGGCCCACAGTTCCTTGATCCTGGGCTGGTTTTCCCACAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CCA 90 bp | AAGTCTACGAAGAACTCTTGTCGACAGCACATCCTGGACGCCCCCTaGCAATCGATACCTCGCCGGCGAACCCGATGCTTGCCCTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: KSTKNSCRQHILDAP*QSIPRRRTRCLPST Trigger: GGTTGAGGGCAAGCATCGGGTTCGCCGGCGAGGTATCGATTGCCAGGGGGCGTCCAGGATGTGCTGTCGACAAGAGTTCTTCGTAGACTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS TCA 90 bp | TCTGGTACCAGCTCCAGAGTAAGGTGTCCCTGGCTGCAAGCAGCTTaGGCTTCAGGTCCCAGGAGAAGCTGGTACCAGCCACTGGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SGTSSRVRCPWLQAA*ASGPRRSWYQPLAF Trigger: GAATGCCAGTGGCTGGTACCAGCTTCTCCTGGGACCTGAAGCTCAAGCTGCTTGCAGCCAGGGACACCTTACTCTGGAGCTGGTACCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CCA 90 bp | GCCACAAAAGGCCTGTGGGAAAACCAGCCCAGGATCAAGGAACTGTaGGCCACCTGGCTTTCTGGTACCAGCTCCAGAGTAAGGTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ATKGLWENQPRIKEL*ATWLSGTSSRVRCP Trigger: GGGACACCTTACTCTGGAGCTGGTACCAGAAAGCCAGGTGGCCCACAGTTCCTTGATCCTGGGCTGGTTTTCCCACAGGCCTTTTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CCA 90 bp | CAATCTCACGGAAGTCTACGAAGAACTCTTGTCGACAGCACATCCTaGACGCCCCCTGGCAATCGATACCTCGCCGGCGAACCCGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: QSHGSLRRTLVDSTS*TPPGNRYLAGEPDA Trigger: AGCATCGGGTTCGCCGGCGAGGTATCGATTGCCAGGGGGCGTCCAGGATGTGCTGTCGACAAGAGTTCTTCGTAGACTTCCGTGAGATTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS GCA 90 bp | GTGTCAGCAAAGCTGATGATCTCATATTCTTCTTGTCTCTGGTCATaGTCCAACAGGGTTTCCCGTCGAGGCCCGCGGAGGCGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSAKLMISYSSCLWS*SNRVSRRGPRRRCS Trigger: GCTGCAGCGCCTCCGCGGGCCTCGACGGGAAACCCTGTTGGAGCATGACCAGAGACAAGAAGAATATGAGATCATCAGCTTTGCTGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CCA 90 bp | AGGTCTGTGTCAGCAAAGCTGATGATCTCATATTCTTCTTGTCTCTaGTCATGCTCCAACAGGGTTTCCCGTCGAGGCCCGCGGAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RSVSAKLMISYSSCL*SCSNRVSRRGPRRR Trigger: GCGCCTCCGCGGGCCTCGACGGGAAACCCTGTTGGAGCATGACCAGAGACAAGAAGAATATGAGATCATCAGCTTTGCTGACACAGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS-3UTR CAA 90 bp | TGGAATAGGAACCTTCCGGTGGCAGGGTCAGGGAGGCAGAGTAGATTACATAGTCTGGCTGCAAGCAGCTaGAGCTTCAGGTCCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WNRNLPVAGSGRQSRLHSLAASS*SFRSQE Trigger: CTCCTGGGACCTGAAGCTCAAGCTGCTTGCAGCCAG...ACTATGTAATCTACTCTGCCTCCCTGACCCTGCCACCGGAAGGTTCCTATTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS CCA 90 bp | TTGTCCAGGATACTTTTCTTGGCCAAATCGAGAAGCAGCTCCCGCTaGCTCTCCAGGTCAAAGATGGCACCCCAACATGCTGGGCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSRILFLAKSRSSSR*LSRSKMAPQHAGHG Trigger: TCCATGCCCAGCATGTTGGGGTGCCATCTTTGACCTGGAGAGCCAGCGGGAGCTGCTTCTCGATTTGGCCAAGAAAAGTATCCTGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CCA 90 bp | ATGCCGCTGGCCATTCTACCAGAGAAGTGGAACTCGAGCCGGGTCTaGTTGATGCTGGAGAGGTCTGTGTCAGCAAAGCTGATGATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: MPLAILPEKWNSSRV*LMLERSVSAKLMIS Trigger: TGAGATCATCAGCTTTGCTGACACAGACCTCTCCAGCATCAACCAGACCCGGCTCGAGTTCCACTTCTCTGGTAGAATGGCCAGCGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS-3UTR CAA 90 bp | ACCCAGGCTAGCCTAGAGCTAGCTGGCCTCAGTCTCTCGTGTGCAGGGCTGGACGATCTCATATTCTTCTaGTCTCTGGTCATGCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TQASLELAGLSLSCAGLDDLIFF*SLVMLQ Trigger: TTGGAGCATGACCAGAGACAAGAAGAATATGAGATC...GTCCAGCCCTGCACACGAGAGACTGAGGCCAGCTAGCTCTAGGCTAGCCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS-3UTR CAA 90 bp | AAGGCTGAGGATGGGTGTACTGGGTCAACCATGTCCCAGGAGAGAGAAAGGCTGTCCAGGATACTTTTCTaGGCCAAATCGAGAAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KAEDGCTGSTMSQERERLSRILF*AKSRSS Trigger: GCTGCTTCTCGATTTGGCCAAGAAAAGTATCCTGGA...CAGCCTTTCTCTCTCCTGGGACATGGTTGACCCAGTACACCCATCCTCAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS-3UTR CAA 90 bp | TCACTAGTGACTCTCTTTAGAGGTGGATCCCCTGAAGTCCACAGAGGGATGTCTATGGTCTGGGTGGCATaGTGGGGGAACTGTACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLVTLFRGGSPEVHRGMSMVWVA*WGNCTK Trigger: CTTCGTACAGTTCCCCCACAATGCCACCCAGACCAT...AGACATCCCTCTGTGGACTTCAGGGGATCCACCTCTAAAGAGAGTCACTAGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS-3UTR CAA 90 bp | TCACTAGTGACTCTCTTTAGAGGTGGATCCCCTGAAGTCCACAGAGGGATGTCTGCAGCTGCGTTGGCTTaGAGCAGATTCAGCACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLVTLFRGGSPEVHRGMSAAALA*SRFSTA Trigger: TGCAGTGCTGAATCTGCTCAAAGCCAACGCAGCTGC...AGACATCCCTCTGTGGACTTCAGGGGATCCACCTCTAAAGAGAGTCACTAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS TCA 90 bp | AGGAGAAGCTGGTACCAGCCACTGGCATTCACCTGCACCACGTACTaGCTTGTCAAGGTGAGGTTGGTGTCATATGGTCTTAGCACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RRSWYQPLAFTCTTY*LVKVRLVSYGLSTR Trigger: TCTTGTGCTAAGACCATATGACACCAACCTCACCTTGACAAGTCAGTACGTGGTGCAGGTGAATGCCAGTGGCTGGTACCAGCTTCTCCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGGGCAGAGAACACTATTTAGTAGCACATCTGGGCTCGGGTCTCCAGATTGGCTGAGGTGCAGCTaGTCCAGGATACTTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RRGQRTLFSSTSGLGSPDWLRCS*SRILFL Trigger: CAAGAAAAGTATCCTGGACAAGCTGCACCTCAGCCA...ATCTGGAGACCCGAGCCCAGATGTGCTACTAAATAGTGTTCTCTGCCCTCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS-3UTR CAA 90 bp | AGAGGGCAGAGAACACTATTTAGTAGCACATCTGGGCTCGGGTCTCCAGATTTGTCAGGTATATCCGTCTaGACAATGTTGCTGTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGQRTLFSSTSGLGSPDLSGISV*TMLLSL Trigger: CAGGGACAGCAACATTGTCAAGACGGATATACCTGA...CAAATCTGGAGACCCGAGCCCAGATGTGCTACTAAATAGTGTTCTCTGCCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS TCA 90 bp | ACCAGCCACTGGCATTCACCTGCACCACGTACTGACTTGTCAAGGTaGGGTTGGTGTCATATGGTCTTAGCACAAGAACTCTTATATTCA | + |
|
Preference number: 5 (lower is better) Translates to: TSHWHSPAPRTDLSR*GWCHMVLAQELLYS Trigger: TGAATATAAGAGTTCTTGTGCTAAGACCATATGACACCAACCTCACCTTGACAAGTCAGTACGTGGTGCAGGTGAATGCCAGTGGCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS-3UTR CAA 90 bp | AGCAATATAATCTTCAGTGACCCTGATGAAGGGGTTCTTCGGAGAGCCACAGAACTTGTCAAGGTGAGGTaGGTGTCATATGGTCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SNIIFSDPDEGVLRRATELVKVR*VSYGLS Trigger: GCTAAGACCATATGACACCAACCTCACCTTGACAAG...TTCTGTGGCTCTCCGAAGAACCCCTTCATCAGGGTCACTGAAGATTATATTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS-3UTR CAA 90 bp | TTCCTTCTTTTACTTTGTGACAAAGGTCTTAATGGCATAACCCAGGCTAGCCTAGTCTACGAAGAACTCTaGTCGACAGCACATCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FLLLLCDKGLNGITQASLVYEEL*STAHPG Trigger: TCCAGGATGTGCTGTCGACAAGAGTTCTTCGTAGAC...TAGGCTAGCCTGGGTTATGCCATTAAGACCTTTGTCACAAAGTAAAAGAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CCA 72 bp | CGCCGGCGAACCCGATGCTTGCCCTCAACCCTTACCTaGGCTGCCACAAAAGGCCTGTGGGAAAACCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRRTRCLPSTLT*AATKGLWENQP Trigger: GGGCTGGTTTTCCCACAGGCCTTTTGTGGCAGCCCAGGTAAGGGTTGAGGGCAAGCATCGGGTTCGCCGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS CAA 90 bp | CTGGACGCCCCCTGGCAATCGATACCTCGCCGGCGAACCCGATGCTaGCCCTCAACCCTTACCTGGGCTGCCACAAAAGGCCTGTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LDAPWQSIPRRRTRC*PSTLTWAATKGLWE Trigger: TTCCCACAGGCCTTTTGTGGCAGCCCAGGTAAGGGTTGAGGGCAAGCATCGGGTTCGCCGGCGAGGTATCGATTGCCAGGGGGCGTCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS GCA 72 bp | CCTGGCAATCGATACCTCGCCGGCGAACCCGATGCTTaGCCTCAACCCTTACCTGGGCTGCCACAAAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGNRYLAGEPDA*PQPLPGLPQKA Trigger: GGCCTTTTGTGGCAGCCCAGGTAAGGGTTGAGGGCAAGCATCGGGTTCGCCGGCGAGGTATCGATTGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS CCA 72 bp | CGGACCTCCATGCCGCTGGCCATTCTACCAGAGAAGTaGAACTCGAGCCGGGTCTGGTTGATGCTGGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RTSMPLAILPEK*NSSRVWLMLER Trigger: CCTCTCCAGCATCAACCAGACCCGGCTCGAGTTCCACTTCTCTGGTAGAATGGCCAGCGGCATGGAGGTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS TCA 72 bp | AGCCCCTGCCAGTGGTGCCAGCAGCTGCGTTGGCTTTaGGCAGATTCAGCACTGCAGTGTGAAAGGAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SPCQWCQQLRWL*ADSALQCERRQ Trigger: CTGCCTCCTTTCACACTGCAGTGCTGAATCTGCTCAAAGCCAACGCAGCTGCTGGCACCACTGGCAGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS GCA 72 bp | GCGAACCCGATGCTTGCCCTCAACCCTTACCTGGGCTaGCACAAAAGGCCTGTGGGAAAACCAGCCCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: ANPMLALNPYLG*HKRPVGKPAQD Trigger: ATCCTGGGCTGGTTTTCCCACAGGCCTTTTGTGGCAGCCCAGGTAAGGGTTGAGGGCAAGCATCGGGTTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CCA 72 bp | CCCTCAACCCTTACCTGGGCTGCCACAAAAGGCCTGTaGGAAAACCAGCCCAGGATCAAGGAACTGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PSTLTWAATKGL*ENQPRIKELWA Trigger: GGCCCACAGTTCCTTGATCCTGGGCTGGTTTTCCCACAGGCCTTTTGTGGCAGCCCAGGTAAGGGTTGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CCA 72 bp | AAGAACTCTTGTCGACAGCACATCCTGGACGCCCCCTaGCAATCGATACCTCGCCGGCGAACCCGATGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KNSCRQHILDAP*QSIPRRRTRCL Trigger: CAAGCATCGGGTTCGCCGGCGAGGTATCGATTGCCAGGGGGCGTCCAGGATGTGCTGTCGACAAGAGTTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CAA 90 bp | CTGGACACTGGCCGACTGAGTATGGGGCGCTGGCTGAGGTGCAGCTaGTCCAGGATACTTTTCTTGGCCAAATCGAGAAGCAGCTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LDTGRLSMGRWLRCS*SRILFLAKSRSSSR Trigger: GCGGGAGCTGCTTCTCGATTTGGCCAAGAAAAGTATCCTGGACAAGCTGCACCTCAGCCAGCGCCCCATACTCAGTCGGCCAGTGTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CCA 72 bp | GGCCTGTGGGAAAACCAGCCCAGGATCAAGGAACTGTaGGCCACCTGGCTTTCTGGTACCAGCTCCAGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: GLWENQPRIKEL*ATWLSGTSSRV Trigger: TACTCTGGAGCTGGTACCAGAAAGCCAGGTGGCCCACAGTTCCTTGATCCTGGGCTGGTTTTCCCACAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CCA 72 bp | GGAAGTCTACGAAGAACTCTTGTCGACAGCACATCCTaGACGCCCCCTGGCAATCGATACCTCGCCGGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: GSLRRTLVDSTS*TPPGNRYLAGE Trigger: TTCGCCGGCGAGGTATCGATTGCCAGGGGGCGTCCAGGATGTGCTGTCGACAAGAGTTCTTCGTAGACTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CAA 72 bp | CGCTGGCTGAGGTGCAGCTTGTCCAGGATACTTTTCTaGGCCAAATCGAGAAGCAGCTCCCGCTGGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RWLRCSLSRILF*AKSRSSSRWLS Trigger: GGAGAGCCAGCGGGAGCTGCTTCTCGATTTGGCCAAGAAAAGTATCCTGGACAAGCTGCACCTCAGCCAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CAA 90 bp | AGTATGGGGCGCTGGCTGAGGTGCAGCTTGTCCAGGATACTTTTCTaGGCCAAATCGAGAAGCAGCTCCCGCTGGCTCTCCAGGTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SMGRWLRCSLSRILF*AKSRSSSRWLSRSK Trigger: CTTTGACCTGGAGAGCCAGCGGGAGCTGCTTCTCGATTTGGCCAAGAAAAGTATCCTGGACAAGCTGCACCTCAGCCAGCGCCCCATACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS GCA 72 bp | GACACTGGCCGACTGAGTATGGGGCGCTGGCTGAGGTaGAGCTTGTCCAGGATACTTTTCTTGGCCAAATCG | + |
|
Preference number: 6 (lower is better) Translates to: DTGRLSMGRWLR*SLSRILFLAKS Trigger: CGATTTGGCCAAGAAAAGTATCCTGGACAAGCTGCACCTCAGCCAGCGCCCCATACTCAGTCGGCCAGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CCA 72 bp | GAGCTTCAGGTCCCAGGAGAAGCTGGTACCAGCCACTaGCATTCACCTGCACCACGTACTGACTTGTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ELQVPGEAGTSH*HSPAPRTDLSR Trigger: CCTTGACAAGTCAGTACGTGGTGCAGGTGAATGCCAGTGGCTGGTACCAGCTTCTCCTGGGACCTGAAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CAA 72 bp | GGCCGACTGAGTATGGGGCGCTGGCTGAGGTGCAGCTaGTCCAGGATACTTTTCTTGGCCAAATCGAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GRLSMGRWLRCS*SRILFLAKSRS Trigger: GCTTCTCGATTTGGCCAAGAAAAGTATCCTGGACAAGCTGCACCTCAGCCAGCGCCCCATACTCAGTCGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CCA 72 bp | GCCATTCTACCAGAGAAGTGGAACTCGAGCCGGGTCTaGTTGATGCTGGAGAGGTCTGTGTCAGCAAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AILPEKWNSSRV*LMLERSVSAKL Trigger: CAGCTTTGCTGACACAGACCTCTCCAGCATCAACCAGACCCGGCTCGAGTTCCACTTCTCTGGTAGAATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
||
| CDS CAA 72 bp | GGCATGGACCCTCAGTTTTGGGGTTCACTACTGTGGTaGGAGTCAGGAACAGAAGAGCCAGGAGCAAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GMDPQFWGSLLW*ESGTEEPGARR Trigger: CCTCCTTGCTCCTGGCTCTTCTGTTCCTGACTCCAACCACAGTAGTGAACCCCAAAACTGAGGGTCCATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS CAA 90 bp | GCTGGAGAGGTCTGTGTCAGCAAAGCTGATGATCTCATATTCTTCTaGTCTCTGGTCATGCTCCAACAGGGTTTCCCGTCGAGGCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: AGEVCVSKADDLIFF*SLVMLQQGFPSRPA Trigger: CGCGGGCCTCGACGGGAAACCCTGTTGGAGCATGACCAGAGACAAGAAGAATATGAGATCATCAGCTTTGCTGACACAGACCTCTCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS GCA 72 bp | AAGCTGATGATCTCATATTCTTCTTGTCTCTGGTCATaGTCCAACAGGGTTTCCCGTCGAGGCCCGCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: KLMISYSSCLWS*SNRVSRRGPRR Trigger: CCTCCGCGGGCCTCGACGGGAAACCCTGTTGGAGCATGACCAGAGACAAGAAGAATATGAGATCATCAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS CAA 72 bp | ATTCCAGCCAATCTCACGGAAGTCTACGAAGAACTCTaGTCGACAGCACATCCTGGACGCCCCCTGGCAATC | + |
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Preference number: 6 (lower is better) Translates to: IPANLTEVYEEL*STAHPGRPLAI Trigger: GATTGCCAGGGGGCGTCCAGGATGTGCTGTCGACAAGAGTTCTTCGTAGACTTCCGTGAGATTGGCTGGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS CAA 90 bp | CCGCTGGCCATTCTACCAGAGAAGTGGAACTCGAGCCGGGTCTGGTaGATGCTGGAGAGGTCTGTGTCAGCAAAGCTGATGATCTCATAT | + |
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Preference number: 6 (lower is better) Translates to: PLAILPEKWNSSRVW*MLERSVSAKLMISY Trigger: ATATGAGATCATCAGCTTTGCTGACACAGACCTCTCCAGCATCAACCAGACCCGGCTCGAGTTCCACTTCTCTGGTAGAATGGCCAGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS CAA 72 bp | ATTCTACCAGAGAAGTGGAACTCGAGCCGGGTCTGGTaGATGCTGGAGAGGTCTGTGTCAGCAAAGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: ILPEKWNSSRVW*MLERSVSAKLM Trigger: CATCAGCTTTGCTGACACAGACCTCTCCAGCATCAACCAGACCCGGCTCGAGTTCCACTTCTCTGGTAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS TCA 72 bp | TGGTACCAGCCACTGGCATTCACCTGCACCACGTACTaGCTTGTCAAGGTGAGGTTGGTGTCATATGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: WYQPLAFTCTTY*LVKVRLVSYGL Trigger: AAGACCATATGACACCAACCTCACCTTGACAAGTCAGTACGTGGTGCAGGTGAATGCCAGTGGCTGGTACCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS CCA 72 bp | TCAGCAAAGCTGATGATCTCATATTCTTCTTGTCTCTaGTCATGCTCCAACAGGGTTTCCCGTCGAGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: SAKLMISYSSCL*SCSNRVSRRGP Trigger: CGGGCCTCGACGGGAAACCCTGTTGGAGCATGACCAGAGACAAGAAGAATATGAGATCATCAGCTTTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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| CDS TCA 72 bp | CAGTGCAGAAGTTCATGGCATAGCCTTCAGGCTGGATaGTCCAGTCATTCCAGCCAATCTCACGGAAGTCTA | + |
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Preference number: 6 (lower is better) Translates to: QCRSSWHSLQAG*SSHSSQSHGSL Trigger: TAGACTTCCGTGAGATTGGCTGGAATGACTGGATCATCCAGCCTGAAGGCTATGCCATGAACTTCTGCACTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026472.10 |
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