Pregenerated sensors for INHBA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041324Ensembl transcript IDs: ENSMUST00000042603.14, ENSMUST00000164993.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAAAGCTGAACCTGGACATCCACCTCACCTCTGTGTCCTCAACATaGCATCTGTCCTCGCATGCGAGATCTTCAAGGTCATTAGACCTT | + |
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Preference number: 1 (lower is better) Translates to: AKLNLDIHLTSVSST*HLSSHARSSRSLDL Trigger: AAGGTCTAATGACCTTGAAGATCTCGCATGCGAGGACAGATGGCATGTTGAGGACACAGAGGTGAGGTGGATGTCCAGGTTCAGCTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR TCA 90 bp | ACAGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTaGACCTGGACATCCACCTCACCTCTGTGTCCTCAACATGCCATC | + |
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Preference number: 1 (lower is better) Translates to: TVQRALKVFHKNWQS*TWTSTSPLCPQHAI Trigger: GATGGCATGTTGAGGACACAGAGGTGAGGTGGATGTCCAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR CCA 90 bp | GACCACCTGCACAGAATTGTTCTTTTACCAGTATGTGTATGCATGTaGTGTGTGGAAACACCTCTGTGTTTGTGTGTGTGGGCGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: DHLHRIVLLPVCVCM*CVETPLCLCVWACV Trigger: CACACACGCCCACACACACAAACACAGAGGTGTTTCCACACACCACATGCATACACATACTGGTAAAAGAACAATTCTGTGCAGGTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR GCA 90 bp | AAATGTGACCACCTGCACAGAATTGTTCTTTTACCAGTATGTGTATaGATGTGGTGTGTGGAAACACCTCTGTGTTTGTGTGTGTGGGCG | + |
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Preference number: 1 (lower is better) Translates to: KCDHLHRIVLLPVCV*MWCVETPLCLCVWA Trigger: CGCCCACACACACAAACACAGAGGTGTTTCCACACACCACATGCATACACATACTGGTAAAAGAACAATTCTGTGCAGGTGGTCACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR CCA 90 bp | TGCACAGAATTGTTCTTTTACCAGTATGTGTATGCATGTGGTGTGTaGAAACACCTCTGTGTTTGTGTGTGTGGGCGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: CTELFFYQYVYACGV*KHLCVCVCGRVCVC Trigger: ACACACACACACACGCCCACACACACAAACACAGAGGTGTTTCCACACACCACATGCATACACATACTGGTAAAAGAACAATTCTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR GCA 90 bp | TCGGGCATTGCTGAATACTGCCTACTAACTGTACAAAGTATTGACTaGATGCCTCGCAAACATCAGAATATCCGCTGGAATGGAATAGAA | + |
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Preference number: 1 (lower is better) Translates to: SGIAEYCLLTVQSID*MPRKHQNIRWNGIE Trigger: TTCTATTCCATTCCAGCGGATATTCTGATGTTTGCGAGGCATGCAGTCAATACTTTGTACAGTTAGTAGGCAGTATTCAGCAATGCCCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR TCA 90 bp | AAGCCTGAACACAATCTACCTAACTCAACCTTAAATCTGTACCCCTaGCTCATTGATGGTGAACAATACCAACCACAGACAGACTGTTTA | + |
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Preference number: 1 (lower is better) Translates to: KPEHNLPNSTLNLYP*LIDGEQYQPQTDCL Trigger: TAAACAGTCTGTCTGTGGTTGGTATTGTTCACCATCAATGAGTCAGGGGTACAGATTTAAGGTTGAGTTAGGTAGATTGTGTTCAGGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR GCA 90 bp | ACTATAACTGAGGCATGTTTGTTCTGGAATCACAAAGTCACGTCTTaGGTTCAGTCTGGCATAGCTCCCAATTTTACTTATTCTGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: TITEACLFWNHKVTS*VQSGIAPNFTYSAF Trigger: AAAGGCAGAATAAGTAAAATTGGGAGCTATGCCAGACTGAACGCAAGACGTGACTTTGTGATTCCAGAACAAACATGCCTCAGTTATAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR GCA 90 bp | TTATTTAACATAAGGCCAAAGAAGCTATCGGGCATTGCTGAATACTaGCTACTAACTGTACAAAGTATTGACTGCATGCCTCGCAAACAT | + |
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Preference number: 1 (lower is better) Translates to: LFNIRPKKLSGIAEY*LLTVQSIDCMPRKH Trigger: ATGTTTGCGAGGCATGCAGTCAATACTTTGTACAGTTAGTAGGCAGTATTCAGCAATGCCCGATAGCTTCTTTGGCCTTATGTTAAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR TCA 90 bp | AATAATATAGCTGAGACACGTGATTTGCTTTTGCTCTTGAAGATGTaGACAGCATCTATGCATTCATTATCTCTGACCCCTCCAATAGCT | + |
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Preference number: 1 (lower is better) Translates to: NNIAETRDLLLLLKM*TASMHSLSLTPPIA Trigger: AGCTATTGGAGGGGTCAGAGATAATGAATGCATAGATGCTGTTCACATCTTCAAGAGCAAAAGCAAATCACGTGTCTCAGCTATATTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR TCA 90 bp | TTTGAACTTGATAATCCAACAGTGTACACTACTGTACATCCAGTATaGAATGTCCTGTTTCATGGATGTAAAAGAGTCAAAACCCAAACC | + |
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Preference number: 1 (lower is better) Translates to: FELDNPTVYTTVHPV*NVLFHGCKRVKTQT Trigger: GGTTTGGGTTTTGACTCTTTTACATCCATGAAACAGGACATTTCATACTGGATGTACAGTAGTGTACACTGTTGGATTATCAAGTTCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR TCA 90 bp | CAAAAGGCCCACAGGAAATCATATTTTTCAAGTGACACAATCATTTaGATGCATGTTACTATAACTGAGGCATGTTTGTTCTGGAATCAC | + |
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Preference number: 1 (lower is better) Translates to: QKAHRKSYFSSDTII*MHVTITEACLFWNH Trigger: GTGATTCCAGAACAAACATGCCTCAGTTATAGTAACATGCATTCAAATGATTGTGTCACTTGAAAAATATGATTTCCTGTGGGCCTTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR TCA 90 bp | GCAAAGCTGAACCTGGACATCCACCTCACCTCTGTGTCCTCAACATGCCATCTGCAACTCCCTGGCTCCTaGGTGCTCTCTCCCTTAACT | + |
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Preference number: 2 (lower is better) Translates to: AKLNLDIHLTSVSSTCHLQLPGS*VLSPLT Trigger: AGTTAAGGGAGAGAGCACTCAGGAGCCAGGGAGTTG...CAGATGGCATGTTGAGGACACAGAGGTGAGGTGGATGTCCAGGTTCAGCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGCTGAACCTGGACATCCACCTCACCTCTGTGTCCTCAACATGCCATCTGTGGCTGGATACTCACTaGGATTTTCAGTCTTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: AKLNLDIHLTSVSSTCHLWLDTH*DFQSFP Trigger: GGGGAAAGACTGAAAATCCCAGTGAGTATCCAGCCA...CAGATGGCATGTTGAGGACACAGAGGTGAGGTGGATGTCCAGGTTCAGCTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR TCA 90 bp | GCAAAGCTGAACCTGGACATCCACCTCACCTCTGTGTCCTCAACATGCCATCTGCCCCATCCTAACATTTaGAATGTACCCACGTACTAC | + |
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Preference number: 2 (lower is better) Translates to: AKLNLDIHLTSVSSTCHLPHPNI*NVPTYY Trigger: GTAGTACGTGGGTACATTTCAAATGTTAGGATGGGG...CAGATGGCATGTTGAGGACACAGAGGTGAGGTGGATGTCCAGGTTCAGCTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR CCA 90 bp | TGCATAAGACAGGGAGGGCCCCTGGAACACAGTAAATATGTTTGCCCAGTAACAATTTGTACAACTCCCTaGCTCCTGAGTGCTCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: CIRQGGPLEHSKYVCPVTICTTP*LLSALS Trigger: GGAGAGAGCACTCAGGAGCCAGGGAGTTGTACAAAT...TGTTACTGGGCAAACATATTTACTGTGTTCCAGGGGCCCTCCCTGTCTTATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR GCA 90 bp | GCTGAACCTGGACATCCACCTCACCTCTGTGTCCTCAACATGCCATCTGTCCTCTTCTTATGCAGTACATaGATTTCCTGCATAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: AEPGHPPHLCVLNMPSVLFLCST*ISCIRQ Trigger: CTGTCTTATGCAGGAAATGCATGTACTGCATAAGAA...GAGGACAGATGGCATGTTGAGGACACAGAGGTGAGGTGGATGTCCAGGTTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGCTGAACCTGGACATCCACCTCACCTCTGTGTCCTCAACATGCCATCTGGGACAATACCCAGTTTaGATAAAACTGATGCAATCA | + |
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Preference number: 2 (lower is better) Translates to: AKLNLDIHLTSVSSTCHLGQYPV*IKLMQS Trigger: TGATTGCATCAGTTTTATCCAAACTGGGTATTGTCC...CAGATGGCATGTTGAGGACACAGAGGTGAGGTGGATGTCCAGGTTCAGCTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR GCA 90 bp | AACAGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGAGTACATGCATTTCCTaGATAAGACAGGGAGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: NSSEGAKGFSQKLAKLNLSTCIS*IRQGGP Trigger: GGGCCCTCCCTGTCTTATGCAGGAAATGCATGTACT...CAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR CCA 90 bp | CAAAATAGAATATTAGAGATTTGTACAACTCCCTGGCTCCTGAGTGCTCTCTCCCATTTAAAGAGGGCCTaGCTGGATACTCACTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: QNRILEICTTPWLLSALSHLKRA*LDTHWD Trigger: ATCCCAGTGAGTATCCAGCCAGGCCCTCTTTAAATG...GGAGAGAGCACTCAGGAGCCAGGGAGTTGTACAAATCTCTAATATTCTATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR CAA 90 bp | GGAGAGAGGACAATACCCAGTTTGGATAAAACTGATGCAATCAGTTaGGTTTTGGAAGAAATGAAGGTACACCATTCTCTCTTCTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: GERTIPSLDKTDAIS*VLEEMKVHHSLFSP Trigger: GGGGGAGAAGAGAGAATGGTGTACCTTCATTTCTTCCAAAACCAAACTGATTGCATCAGTTTTATCCAAACTGGGTATTGTCCTCTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR GCA 90 bp | AACAGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGTTCATCTCTGAGCCCTaGCTTAGGATATTTTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: NSSEGAKGFSQKLAKLNLFISEP*LRIFFH Trigger: GTGGAAAAATATCCTAAGGCAGGGCTCAGAGATGAA...CAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR CCA 90 bp | GAAGTTGCCAAAAGGCCCACAGGAAATCATATTTTTCAAGTGACACAATCATTTACCTGGGTAAGTGGGTaGGACTGGCCCTTTAAAACT | + |
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Preference number: 2 (lower is better) Translates to: EVAKRPTGNHIFQVTQSFTWVSG*DWPFKT Trigger: AGTTTTAAAGGGCCAGTCCCACCCACTTACCCAGGT...AAATGATTGTGTCACTTGAAAAATATGATTTCCTGTGGGCCTTTTGGCAACTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR TCA 90 bp | CAAAATAGAATATTAGAGATTTGTACAACTCCCTGGCTCCTGAGTGCTCTCTCCTGGTTTTGGAAGAAATaGAGGTACACCATTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: QNRILEICTTPWLLSALSWFWKK*RYTILS Trigger: AGAGAGAATGGTGTACCTTCATTTCTTCCAAAACCA...GGAGAGAGCACTCAGGAGCCAGGGAGTTGTACAAATCTCTAATATTCTATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR GCA 90 bp | AGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGGACAATGACAGCCTGAAGTaGTTAAAATGTGTATGGACA | + |
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Preference number: 2 (lower is better) Translates to: SSEGAKGFSQKLAKLNLDNDSLK*LKCVWT Trigger: TGTCCATACACATTTTAAGCACTTCAGGCTGTCATT...GTCCAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR CCA 90 bp | GAAGTTGCCAAAAGGCCCACAGGAAATCATATTTTTCAAGTGACACAATCATTTGACATACTTATAACCTaGGTAAGTGGGTGGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: EVAKRPTGNHIFQVTQSFDILIT*VSGWDW Trigger: CCAGTCCCACCCACTTACCCAGGTTATAAGTATGTC...AAATGATTGTGTCACTTGAAAAATATGATTTCCTGTGGGCCTTTTGGCAACTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR CCA 90 bp | GAAGTTGCCAAAAGGCCCACAGGAAATCATATTTTTCAAGTGACACAATCATTTGACAGGGAGGGCCCCTaGAACACAGTAAATATGTTT | + |
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Preference number: 2 (lower is better) Translates to: EVAKRPTGNHIFQVTQSFDREGP*NTVNMF Trigger: AAACATATTTACTGTGTTCCAGGGGCCCTCCCTGTC...AAATGATTGTGTCACTTGAAAAATATGATTTCCTGTGGGCCTTTTGGCAACTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR GCA 90 bp | CAAAATAGAATATTAGAGATTTGTACAACTCCCTGGCTCCTGAGTGCTCTCTCCGAAAATGTGACCACCTaGACAGAATTGTTCTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: QNRILEICTTPWLLSALSENVTT*TELFFY Trigger: GTAAAAGAACAATTCTGTGCAGGTGGTCACATTTTC...GGAGAGAGCACTCAGGAGCCAGGGAGTTGTACAAATCTCTAATATTCTATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR TCA 90 bp | GAAGTTGCCAAAAGGCCCACAGGAAATCATATTTTTCAAGTGACACAATCATTTTCCCCATTGCTGTGCTaGAATTTGACTTATTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: EVAKRPTGNHIFQVTQSFSPLLC*NLTYFG Trigger: CCCAAAATAAGTCAAATTTCAGCACAGCAATGGGGA...AAATGATTGTGTCACTTGAAAAATATGATTTCCTGTGGGCCTTTTGGCAACTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR CCA 90 bp | CAAAATAGAATATTAGAGATTTGTACAACTCCCTGGCTCCTGAGTGCTCTCTCCCTCAATGTTTTATGTTaGTTTTGTCTGGTGGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: QNRILEICTTPWLLSALSLNVLC*FCLVAK Trigger: TTTTGCCACCAGACAAAACCAACATAAAACATTGAG...GGAGAGAGCACTCAGGAGCCAGGGAGTTGTACAAATCTCTAATATTCTATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR CCA 90 bp | GAAGTTGCCAAAAGGCCCACAGGAAATCATATTTTTCAAGTGACACAATCATTTTATGTTGGTTTTGTCTaGTGGCAAAAGTGGTACAGA | + |
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Preference number: 2 (lower is better) Translates to: EVAKRPTGNHIFQVTQSFYVGFV*WQKWYR Trigger: TCTGTACCACTTTTGCCACCAGACAAAACCAACATA...AAATGATTGTGTCACTTGAAAAATATGATTTCCTGTGGGCCTTTTGGCAACTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR CAA 90 bp | TCTCTTTTTGTCCTCTTTCAGGTAAACAGTTTCAAACCTATTAGGTaGCATAGTTCTAGGATCAAAAGCACCTTAACGAAATGTAACTTG | + |
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Preference number: 2 (lower is better) Translates to: SLFVLFQVNSFKPIR*HSSRIKSTLTKCNL Trigger: CAAGTTACATTTCGTTAAGGTGCTTTTGATCCTAGAACTATGCAACCTAATAGGTTTGAAACTGTTTACCTGAAAGAGGACAAAAAGAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR GCA 72 bp | AACCTGGACATCCACCTCACCTCTGTGTCCTCAACATaGCATCTGTCCTCGCATGCGAGATCTTCAAGGTCA | + |
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Preference number: 3 (lower is better) Translates to: NLDIHLTSVSST*HLSSHARSSRS Trigger: TGACCTTGAAGATCTCGCATGCGAGGACAGATGGCATGTTGAGGACACAGAGGTGAGGTGGATGTCCAGGTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR CAA 90 bp | GCAAAGCTGAACCTGGACATCCACCTCACCTCTGTGTCCTCAACATGCCATCTGTCTAGACATTATTATTaGGGTTGTGCTAACCCACAT | + |
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Preference number: 3 (lower is better) Translates to: AKLNLDIHLTSVSSTCHLSRHYY*GCANPH Trigger: ATGTGGGTTAGCACAACCCAAATAATAATGTCTAGA...CAGATGGCATGTTGAGGACACAGAGGTGAGGTGGATGTCCAGGTTCAGCTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR TCA 72 bp | AGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTaGACCTGGACATCCACCTCACCTCTGTGTCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: RALKVFHKNWQS*TWTSTSPLCPQ Trigger: TTGAGGACACAGAGGTGAGGTGGATGTCCAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR CCA 72 bp | AAGAGGGGATTTCATCCTGTACATTTAAAGAGGGCCTaGCTGGATACTCACTGGGATTTTCAGTCTTTCCCC | + |
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Preference number: 3 (lower is better) Translates to: KRGFHPVHLKRA*LDTHWDFQSFP Trigger: GGGGAAAGACTGAAAATCCCAGTGAGTATCCAGCCAGGCCCTCTTTAAATGTACAGGATGAAATCCCCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR GCA 72 bp | AATCCCTGTCTCCTTTACTGCTTCATCTCTGAGCCCTaGCTTAGGATATTTTTCCACATCTTCCTTCATCTG | + |
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Preference number: 3 (lower is better) Translates to: NPCLLYCFISEP*LRIFFHIFLHL Trigger: CAGATGAAGGAAGATGTGGAAAAATATCCTAAGGCAGGGCTCAGAGATGAAGCAGTAAAGGAGACAGGGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR CAA 90 bp | CAAAATAGAATATTAGAGATTTGTACAACTCCCTGGCTCCTGAGTGCTCTCTCCTGTACCCCTGACTCATaGATGGTGAACAATACCAAC | + |
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Preference number: 3 (lower is better) Translates to: QNRILEICTTPWLLSALSCTPDS*MVNNTN Trigger: GTTGGTATTGTTCACCATCAATGAGTCAGGGGTACA...GGAGAGAGCACTCAGGAGCCAGGGAGTTGTACAAATCTCTAATATTCTATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR TCA 72 bp | CATAAATCCTGCTCTTCCCATGGTCTAGATCATCTCTaGTATGGCACAGTTAGATCTCTTGCCCACTATTTC | + |
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Preference number: 3 (lower is better) Translates to: HKSCSSHGLDHL*YGTVRSLAHYF Trigger: GAAATAGTGGGCAAGAGATCTAACTGTGCCATATCAGAGATGATCTAGACCATGGGAAGAGCAGGATTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR TCA 72 bp | GCTGAGACACGTGATTTGCTTTTGCTCTTGAAGATGTaGACAGCATCTATGCATTCATTATCTCTGACCCCT | + |
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Preference number: 3 (lower is better) Translates to: AETRDLLLLLKM*TASMHSLSLTP Trigger: AGGGGTCAGAGATAATGAATGCATAGATGCTGTTCACATCTTCAAGAGCAAAAGCAAATCACGTGTCTCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR GCA 72 bp | GAGGCATGTTTGTTCTGGAATCACAAAGTCACGTCTTaGGTTCAGTCTGGCATAGCTCCCAATTTTACTTAT | + |
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Preference number: 3 (lower is better) Translates to: EACLFWNHKVTS*VQSGIAPNFTY Trigger: ATAAGTAAAATTGGGAGCTATGCCAGACTGAACGCAAGACGTGACTTTGTGATTCCAGAACAAACATGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR GCA 72 bp | GCTGAATACTGCCTACTAACTGTACAAAGTATTGACTaGATGCCTCGCAAACATCAGAATATCCGCTGGAAT | + |
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Preference number: 3 (lower is better) Translates to: AEYCLLTVQSID*MPRKHQNIRWN Trigger: ATTCCAGCGGATATTCTGATGTTTGCGAGGCATGCAGTCAATACTTTGTACAGTTAGTAGGCAGTATTCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR GCA 72 bp | ATAAGGCCAAAGAAGCTATCGGGCATTGCTGAATACTaGCTACTAACTGTACAAAGTATTGACTGCATGCCT | + |
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Preference number: 3 (lower is better) Translates to: IRPKKLSGIAEY*LLTVQSIDCMP Trigger: AGGCATGCAGTCAATACTTTGTACAGTTAGTAGGCAGTATTCAGCAATGCCCGATAGCTTCTTTGGCCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR CAA 90 bp | AACAGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGACCACCTGCACAGAATaGTTCTTTTACCAGTATGTG | + |
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Preference number: 3 (lower is better) Translates to: NSSEGAKGFSQKLAKLNLTTCTE*FFYQYV Trigger: CACATACTGGTAAAAGAACAATTCTGTGCAGGTGGT...CAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR TCA 72 bp | CACAATCTACCTAACTCAACCTTAAATCTGTACCCCTaGCTCATTGATGGTGAACAATACCAACCACAGACA | + |
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Preference number: 3 (lower is better) Translates to: HNLPNSTLNLYP*LIDGEQYQPQT Trigger: TGTCTGTGGTTGGTATTGTTCACCATCAATGAGTCAGGGGTACAGATTTAAGGTTGAGTTAGGTAGATTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR CAA 90 bp | AACAGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGTGTTTTATGTTGGTTTaGTCTGGTGGCAAAAGTGGT | + |
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Preference number: 3 (lower is better) Translates to: NSSEGAKGFSQKLAKLNLCFMLV*SGGKSG Trigger: ACCACTTTTGCCACCAGACAAAACCAACATAAAACA...CAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR-3UTR CAA 90 bp | GAAGTTGCCAAAAGGCCCACAGGAAATCATATTTTTCAAGTGACACAATCATTTGCACAGTTAGATCTCTaGCCCACTATTTCTCTAGGC | + |
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Preference number: 3 (lower is better) Translates to: EVAKRPTGNHIFQVTQSFAQLDL*PTISLG Trigger: GCCTAGAGAAATAGTGGGCAAGAGATCTAACTGTGC...AAATGATTGTGTCACTTGAAAAATATGATTTCCTGTGGGCCTTTTGGCAACTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
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| 3UTR GCA 72 bp | ATTATAATTCATTTCTTATGCAGTACATGCATTTCCTaGATAAGACAGGGAGGGCCCCTGGAACACAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: IIIHFLCSTCIS*IRQGGPLEHSK Trigger: TTTACTGTGTTCCAGGGGCCCTCCCTGTCTTATGCAGGAAATGCATGTACTGCATAAGAAATGAATTATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTTGCCAAAAGGCCCACAGGAAATCATATTTTTCAAGTGACACAATCATTTGGTTTTTCACAAAAATaGGCAAAGCTGAACCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: EVAKRPTGNHIFQVTQSFGFSQK*AKLNLD Trigger: GTCCAGGTTCAGCTTTGCCAATTTTTGTGAAAAACC...AAATGATTGTGTCACTTGAAAAATATGATTTCCTGTGGGCCTTTTGGCAACTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTTGCCAAAAGGCCCACAGGAAATCATATTTTTCAAGTGACACAATCATTTGCAATCAGTTTGGTTTaGGAAGAAATGAAGGTACAC | + |
|
Preference number: 3 (lower is better) Translates to: EVAKRPTGNHIFQVTQSFAISLV*EEMKVH Trigger: GTGTACCTTCATTTCTTCCAAAACCAAACTGATTGC...AAATGATTGTGTCACTTGAAAAATATGATTTCCTGTGGGCCTTTTGGCAACTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTTGCCAAAAGGCCCACAGGAAATCATATTTTTCAAGTGACACAATCATTTCAAGGCCATACAAATTaGATGAGTTCTGATGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: EVAKRPTGNHIFQVTQSFQGHTN*MSSDEV Trigger: AACCTCATCAGAACTCATCAAATTTGTATGGCCTTG...AAATGATTGTGTCACTTGAAAAATATGATTTCCTGTGGGCCTTTTGGCAACTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTTGCCAAAAGGCCCACAGGAAATCATATTTTTCAAGTGACACAATCATTTACTGATGCAATCAGTTaGGTTTTGGAAGAAATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: EVAKRPTGNHIFQVTQSFTDAIS*VLEEMK Trigger: CTTCATTTCTTCCAAAACCAAACTGATTGCATCAGT...AAATGATTGTGTCACTTGAAAAATATGATTTCCTGTGGGCCTTTTGGCAACTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR GCA 90 bp | GCAAAGCTGAACCTGGACATCCACCTCACCTCTGTGTCCTCAACATGCCATCTGCCCCCGTGTCCAAGCTaGCCTGTGGGTGCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AKLNLDIHLTSVSSTCHLPPCPS*PVGASA Trigger: AGCAGAAGCACCCACAGGGCAGCTTGGACACGGGGG...CAGATGGCATGTTGAGGACACAGAGGTGAGGTGGATGTCCAGGTTCAGCTTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR TCA 90 bp | CAAAATAGAATATTAGAGATTTGTACAACTCCCTGGCTCCTGAGTGCTCTCTCCCGGGCAGTCCGGGGCTaGGCCGTGCCCCTCGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: QNRILEICTTPWLLSALSRAVRG*AVPLGS Trigger: GGATCCGAGGGGCACGGCTCAGCCCCGGACTGCCCG...GGAGAGAGCACTCAGGAGCCAGGGAGTTGTACAAATCTCTAATATTCTATTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR TCA 90 bp | GCAAAGCTGAACCTGGACATCCACCTCACCTCTGTGTCCTCAACATGCCATCTGTGGGCACCGGCTGGGTaGCATCGGGTCTCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AKLNLDIHLTSVSSTCHLWAPAG*HRVSSS Trigger: TGAAGAAGAGACCCGATGTCACCCAGCCGGTGCCCA...CAGATGGCATGTTGAGGACACAGAGGTGAGGTGGATGTCCAGGTTCAGCTTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR CCA 90 bp | GCAAAGCTGAACCTGGACATCCACCTCACCTCTGTGTCCTCAACATGCCATCTGGGCGCTGGATGCTGCTaGACACTGGAAAGATGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AKLNLDIHLTSVSSTCHLGAGCC*TLERCA Trigger: GGCACATCTTTCCAGTGTCCAGCAGCATCCAGCGCC...CAGATGGCATGTTGAGGACACAGAGGTGAGGTGGATGTCCAGGTTCAGCTTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR TCA 90 bp | GCAAAGCTGAACCTGGACATCCACCTCACCTCTGTGTCCTCAACATGCCATCTGCCGAGGTCTGCTCCATaGGTTCATTCATTTCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AKLNLDIHLTSVSSTCHLPRSAP*VHSFRP Trigger: GGGCCGAAATGAATGAACTCATGGAGCAGACCTCGG...CAGATGGCATGTTGAGGACACAGAGGTGAGGTGGATGTCCAGGTTCAGCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR TCA 90 bp | GCAAAGCTGAACCTGGACATCCACCTCACCTCTGTGTCCTCAACATGCCATCTGGGTGGGCACACAGCATaGCTTAAGGTTGGCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AKLNLDIHLTSVSSTCHLGGHTA*LKVGKG Trigger: CCCTTTGCCAACCTTAAGTCATGCTGTGTGCCCACC...CAGATGGCATGTTGAGGACACAGAGGTGAGGTGGATGTCCAGGTTCAGCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR TCA 90 bp | GCAAAGCTGAACCTGGACATCCACCTCACCTCTGTGTCCTCAACATGCCATCTGGGGTGCTTCTGCTGCTaGAATAGACGGATGGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: AKLNLDIHLTSVSSTCHLGCFCC*NRRMVT Trigger: AGTCACCATCCGTCTATTTCAGCAGCAGAAGCACCC...CAGATGGCATGTTGAGGACACAGAGGTGAGGTGGATGTCCAGGTTCAGCTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR TCA 90 bp | GCTGAACCTGGACATCCACCTCACCTCTGTGTCCTCAACATGCCATCTGTCCTCTCTTACAGCAAATGTTaGCCTTGCCGTCGCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AEPGHPPHLCVLNMPSVLSYSKC*PCRRTP Trigger: TGGAGTGCGACGGCAAGGTCAACATTTGCTGTAAGA...GAGGACAGATGGCATGTTGAGGACACAGAGGTGAGGTGGATGTCCAGGTTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR TCA 90 bp | AACAGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGCGCCTACGCCTGCGATaGGGGTGGTCTTCGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: NSSEGAKGFSQKLAKLNLRLRLR*GWSSDC Trigger: GCAGTCCGAAGACCACCCTCATCGCAGGCGTAGGCG...CAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR GCA 90 bp | TGCATAAGACAGGGAGGGCCCCTGGAACACAGTAAATATGTTTGCCCAGTAACACCACTCTCCTGGCACTaGTCACAAGCAATCCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: CIRQGGPLEHSKYVCPVTPLSWH*SQAIRT Trigger: CGTGCGGATTGCTTGTGAGCAGTGCCAGGAGAGTGG...TGTTACTGGGCAAACATATTTACTGTGTTCCAGGGGCCCTCCCTGTCTTATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR GCA 90 bp | AACAGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGAGCCCCGCCTACGCCTaGGATGAGGGTGGTCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: NSSEGAKGFSQKLAKLNLSPAYA*DEGGLR Trigger: CCGAAGACCACCCTCATCGCAGGCGTAGGCGGGGCT...CAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR GCA 90 bp | GAAGTTGCCAAAAGGCCCACAGGAAATCATATTTTTCAAGTGACACAATCATTTTCCGGGGCTGAGCCGTaGCCCTCGGATCCTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EVAKRPTGNHIFQVTQSFSGAEP*PSDPGV Trigger: CACCCCAGGATCCGAGGGGCACGGCTCAGCCCCGGA...AAATGATTGTGTCACTTGAAAAATATGATTTCCTGTGGGCCTTTTGGCAACTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR GCA 90 bp | TGCTTCATCTCTGAGCCCTGCCTTAGGATATTTTTCCACATCTTCCTTCATCTGGGGTGGTCTTCGGACTaGCTAGCCTGCAGCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CFISEPCLRIFFHIFLHLGWSSD*LACSMR Trigger: CCTCATGCTGCAGGCTAGGCAGTCCGAAGACCACCC...CAGATGAAGGAAGATGTGGAAAAATATCCTAAGGCAGGGCTCAGAGATGAAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR GCA 90 bp | TGCTTCATCTCTGAGCCCTGCCTTAGGATATTTTTCCACATCTTCCTTCATCTGGGACCCAGAGGTGCCTaGTATGTGGCTTGGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: CFISEPCLRIFFHIFLHLGPRGA*YVAWAL Trigger: GAGTGCCCAAGCCACATAGCAGGCACCTCTGGGTCC...CAGATGAAGGAAGATGTGGAAAAATATCCTAAGGCAGGGCTCAGAGATGAAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR CCA 90 bp | TGCATAAGACAGGGAGGGCCCCTGGAACACAGTAAATATGTTTGCCCAGTAACACCAGAAGCACTAGACTaGCACCACTCTCCTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: CIRQGGPLEHSKYVCPVTPEALD*HHSPGT Trigger: AGTGCCAGGAGAGTGGTGCCAGTCTAGTGCTTCTGG...TGTTACTGGGCAAACATATTTACTGTGTTCCAGGGGCCCTCCCTGTCTTATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR CCA 90 bp | TGCTTCATCTCTGAGCCCTGCCTTAGGATATTTTTCCACATCTTCCTTCATCTGGAGGTGCCTGCTATGTaGCTTGGGCACTCCCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CFISEPCLRIFFHIFLHLEVPAM*LGHSPS Trigger: TGAGGGGGAGTGCCCAAGCCACATAGCAGGCACCTC...CAGATGAAGGAAGATGTGGAAAAATATCCTAAGGCAGGGCTCAGAGATGAAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR GCA 90 bp | TGCATAAGACAGGGAGGGCCCCTGGAACACAGTAAATATGTTTGCCCAGTAACATCGGACTGCCTAGCCTaGAGCATGAGGAAAGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: CIRQGGPLEHSKYVCPVTSDCLA*SMRKGL Trigger: TAGACCTTTCCTCATGCTGCAGGCTAGGCAGTCCGA...TGTTACTGGGCAAACATATTTACTGTGTTCCAGGGGCCCTCCCTGTCTTATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR TCA 90 bp | AGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGGACTGCACGCTCCACTACTaGCAGGTCACTGCCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSEGAKGFSQKLAKLNLDCTLHY*QVTAFL Trigger: AAGGAAGGCAGTGACCTGTCAGTAGTGGAGCGTGCA...GTCCAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR GCA 90 bp | GCAAAGCTGAACCTGGACATCCACCTCACCTCTGTGTCCTCAACATGCCATCTGAGCATGTTTAAGATGTaGTTCTTGACAGCCTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: AKLNLDIHLTSVSSTCHLSMFKM*FLTAST Trigger: GGTAGAGGCTGTCAAGAAGCACATCTTAAACATGCT...CAGATGGCATGTTGAGGACACAGAGGTGAGGTGGATGTCCAGGTTCAGCTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR GCA 90 bp | AACAGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGCCAGCAGGCGCTGGATaGTGCTGGACACTGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NSSEGAKGFSQKLAKLNLPAGAG*CWTLER Trigger: TCTTTCCAGTGTCCAGCAGCATCCAGCGCCTGCTGG...CAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR CCA 90 bp | CCTATTAGGTTGCATAGTTCTAGGATCAAAAGCACCTTAACGAAATGTAACTTGCATCCTTCGGAAGGGTaGCCAGCGCACAGGACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PIRLHSSRIKSTLTKCNLHPSEG*PAHRTG Trigger: GCCCGTCCTGTGCGCTGGCCACCCTTCCGAAGGATG...CAAGTTACATTTCGTTAAGGTGCTTTTGATCCTAGAACTATGCAACCTAATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR CCA 90 bp | CCTATTAGGTTGCATAGTTCTAGGATCAAAAGCACCTTAACGAAATGTAACTTGGCCTTGGGCACCGGCTaGGTGACATCGGGTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PIRLHSSRIKSTLTKCNLALGTG*VTSGLF Trigger: GAAGAGACCCGATGTCACCCAGCCGGTGCCCAAGGC...CAAGTTACATTTCGTTAAGGTGCTTTTGATCCTAGAACTATGCAACCTAATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGGACCCCCCTCACAATAATTaGCGTGATAGCCAGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSEGAKGFSQKLAKLNLDPPHNN*RDSQRE Trigger: CTCCCTCTGGCTATCACGCCAATTATTGTGAGGGGG...GTCCAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR CCA 90 bp | AACAGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGGCCTGCTATGTGGCTTaGGCACTCCCCCTCACAATA | + |
|
Preference number: 4 (lower is better) Translates to: NSSEGAKGFSQKLAKLNLACYVA*ALPLTI Trigger: TATTGTGAGGGGGAGTGCCCAAGCCACATAGCAGGC...CAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR CCA 90 bp | TGCATAAGACAGGGAGGGCCCCTGGAACACAGTAAATATGTTTGCCCAGTAACACATCGTAATACAGCATaGACATGGGTCTCAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CIRQGGPLEHSKYVCPVTHRNTA*TWVSAW Trigger: CCAAGCTGAGACCCATGTCCATGCTGTATTACGATG...TGTTACTGGGCAAACATATTTACTGTGTTCCAGGGGCCCTCCCTGTCTTATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR TCA 90 bp | AGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGGACCCCACTTTACCCACATaGAGCTTTCTGATCGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSEGAKGFSQKLAKLNLDPTLPT*SFLIAL Trigger: CAACGCGATCAGAAAGCTTCATGTGGGTAAAGTGGG...GTCCAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR TCA 90 bp | AGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGGACGTGGTTAATGACTGTTaGGTGGAAGGAGAGCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSEGAKGFSQKLAKLNLDVVNDC*VEGERG Trigger: TCCTCGCTCTCCTTCCACTCAACAGTCATTAACCAC...GTCCAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR GCA 90 bp | TGCATAAGACAGGGAGGGCCCCTGGAACACAGTAAATATGTTTGCCCAGTAACACTACTGACAGGTCACTaGCTTCCTTGGAAATCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CIRQGGPLEHSKYVCPVTLLTGH*LPWKSQ Trigger: TTGAGATTTCCAAGGAAGGCAGTGACCTGTCAGTAG...TGTTACTGGGCAAACATATTTACTGTGTTCCAGGGGCCCTCCCTGTCTTATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGGACAGCCTCTACCATCTCTaGCTGAGAGTTAGGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SSEGAKGFSQKLAKLNLDSLYHL*LRVRSI Trigger: GATGGACCTAACTCTCAGCCAGAGATGGTAGAGGCT...GTCCAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGGACTTAATGACTGTTGAGTaGAAGGAGAGCGAGGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSEGAKGFSQKLAKLNLDLMTVE*KESEDP Trigger: TGGGTCCTCGCTCTCCTTCCACTCAACAGTCATTAA...GTCCAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR TCA 90 bp | TGCTTCATCTCTGAGCCCTGCCTTAGGATATTTTTCCACATCTTCCTTCATCTGGAGGAAAGGTCTATGTaGCTGTTCCTTTTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CFISEPCLRIFFHIFLHLEERSM*LFLFLF Trigger: GAAGAGGAAAAGGAACAGTCACATAGACCTTTCCTC...CAGATGAAGGAAGATGTGGAAAAATATCCTAAGGCAGGGCTCAGAGATGAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR CCA 90 bp | CCTATTAGGTTGCATAGTTCTAGGATCAAAAGCACCTTAACGAAATGTAACTTGAGTGCAGTGTCTTCCTaGCTGTGCCTGACTCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PIRLHSSRIKSTLTKCNLSAVSS*LCLTRQ Trigger: TTGCCGAGTCAGGCACAGCCAGGAAGACACTGCACT...CAAGTTACATTTCGTTAAGGTGCTTTTGATCCTAGAACTATGCAACCTAATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR CCA 90 bp | CAAAATAGAATATTAGAGATTTGTACAACTCCCTGGCTCCTGAGTGCTCTCTCCGGTCACTGCCTTCCTTaGAAATCTCAAAGTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QNRILEICTTPWLLSALSGHCLP*KSQSAV Trigger: CACTGCACTTTGAGATTTCCAAGGAAGGCAGTGACC...GGAGAGAGCACTCAGGAGCCAGGGAGTTGTACAAATCTCTAATATTCTATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR GCA 90 bp | TGCTTCATCTCTGAGCCCTGCCTTAGGATATTTTTCCACATCTTCCTTCATCTGATGATCTCCGAGGTCTaGTCCATGAGTTCATTCATT | + |
|
Preference number: 4 (lower is better) Translates to: CFISEPCLRIFFHIFLHLMISEV*SMSSFI Trigger: AATGAATGAACTCATGGAGCAGACCTCGGAGATCAT...CAGATGAAGGAAGATGTGGAAAAATATCCTAAGGCAGGGCTCAGAGATGAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGGACTATAATCCAGCAACTTaGCAACAGAAATCCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSEGAKGFSQKLAKLNLDYNPAT*QQKSSQ Trigger: CTGAGAGGATTTCTGTTGGCAAGTTGCTGGATTATA...GTCCAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR TCA 90 bp | GAAGTTGCCAAAAGGCCCACAGGAAATCATATTTTTCAAGTGACACAATCATTTGAAATAGACGGATGGTaGCTTTGGTCCTGGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EVAKRPTGNHIFQVTQSFEIDGW*LWSWFC Trigger: ACAGAACCAGGACCAAAGTCACCATCCGTCTATTTC...AAATGATTGTGTCACTTGAAAAATATGATTTCCTGTGGGCCTTTTGGCAACTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR TCA 90 bp | CCTATTAGGTTGCATAGTTCTAGGATCAAAAGCACCTTAACGAAATGTAACTTGTTAAGATGTGCTTCTTaGCAGCCTCTACCATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PIRLHSSRIKSTLTKCNLLRCAS*QPLPSL Trigger: CAGAGATGGTAGAGGCTGTCAAGAAGCACATCTTAA...CAAGTTACATTTCGTTAAGGTGCTTTTGATCCTAGAACTATGCAACCTAATAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR GCA 90 bp | GAAGTTGCCAAAAGGCCCACAGGAAATCATATTTTTCAAGTGACACAATCATTTCTTTCTTCTTCTTCTTaGCCAGAAGCACTAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: EVAKRPTGNHIFQVTQSFLSSSS*PEALDW Trigger: CCAGTCTAGTGCTTCTGGGCAAGAAGAAGAAGAAAG...AAATGATTGTGTCACTTGAAAAATATGATTTCCTGTGGGCCTTTTGGCAACTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| 3UTR CAA 72 bp | AGTTCTAGGATCAAAAGCACCTTAACGAAATGTAACTaGGTATTCTTCTTCCCTTGGTCTTTCATTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSRIKSTLTKCN*VFFFPWSFILS Trigger: GGAAAGAATGAAAGACCAAGGGAAGAAGAATACCAAGTTACATTTCGTTAAGGTGCTTTTGATCCTAGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| 3UTR CAA 72 bp | GTCCTCTTTCAGGTAAACAGTTTCAAACCTATTAGGTaGCATAGTTCTAGGATCAAAAGCACCTTAACGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLFQVNSFKPIR*HSSRIKSTLTK Trigger: TTTCGTTAAGGTGCTTTTGATCCTAGAACTATGCAACCTAATAGGTTTGAAACTGTTTACCTGAAAGAGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| 3UTR CAA 72 bp | ATACACATACAAGCATGTAGTCTCATGAATTTGAACTaGATAATCCAACAGTGTACACTACTGTACATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IHIQACSLMNLN*IIQQCTLLYIQ Trigger: CTGGATGTACAGTAGTGTACACTGTTGGATTATCAAGTTCAAATTCATGAGACTACATGCTTGTATGTGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS TCA 90 bp | ATGTTGACCTTGCCGTCGCACTCCAAGCCCCGCCTACGCCTGCGATaGGGGTGGTCTTCGGACTGCCTAGCCTGCAGCATGAGGAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: MLTLPSHSKPRLRLR*GWSSDCLACSMRKG Trigger: ACCTTTCCTCATGCTGCAGGCTAGGCAGTCCGAAGACCACCCTCATCGCAGGCGTAGGCGGGGCTTGGAGTGCGACGGCAAGGTCAACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS GCA 90 bp | TCCGCACGTCCAGGGAACTCTTTCCCTGGTCCAGCAGGCGCTGGATaGTGCTGGACACTGGAAAGATGTGCCAGGTACTCTTCCGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SARPGNSFPGPAGAG*CWTLERCARYSSEH Trigger: ATGCTCGGAAGAGTACCTGGCACATCTTTCCAGTGTCCAGCAGCATCCAGCGCCTGCTGGACCAGGGAAAGAGTTCCCTGGACGTGCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS CCA 90 bp | TGGCACTGCTCACAAGCAATCCGCACGTCCAGGGAACTCTTTCCCTaGTCCAGCAGGCGCTGGATGCTGCTGGACACTGGAAAGATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WHCSQAIRTSRELFP*SSRRWMLLDTGKMC Trigger: GCACATCTTTCCAGTGTCCAGCAGCATCCAGCGCCTGCTGGACCAGGGAAAGAGTTCCCTGGACGTGCGGATTGCTTGTGAGCAGTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS TCA 90 bp | TCGTCCTCTATCTCCACATACCCGTTCTCCCCCACTTTACCCACATaGAGCTTTCTGATCGCGTTGAGAAGCGCCGCCTTGGGCACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSISTYPFSPTLPT*SFLIALRSAALGTG Trigger: GCCGGTGCCCAAGGCGGCGCTTCTCAACGCGATCAGAAAGCTTCATGTGGGTAAAGTGGGGGAGAACGGGTATGTGGAGATAGAGGACGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS TCA 90 bp | GGCAAAGGGGCTGTGACCCCTCATGCGGTAGTGGTTAATGACTGTTaGGTGGAAGGAGAGCGAGGACCCAGAGGTGCCTGCTATGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GKGAVTPHAVVVNDC*VEGERGPRGACYVA Trigger: AGCCACATAGCAGGCACCTCTGGGTCCTCGCTCTCCTTCCACTCAACAGTCATTAACCACTACCGCATGAGGGGTCACAGCCCCTTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS GCA 90 bp | GCACGTCCAGGGAACTCTTTCCCTGGTCCAGCAGGCGCTGGATGCTaGTGGACACTGGAAAGATGTGCCAGGTACTCTTCCGAGCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: ARPGNSFPGPAGAGC*WTLERCARYSSEHQ Trigger: TTGATGCTCGGAAGAGTACCTGGCACATCTTTCCAGTGTCCAGCAGCATCCAGCGCCTGCTGGACCAGGGAAAGAGTTCCCTGGACGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS GCA 90 bp | TTCTTCTTGCCCAGAAGCACTAGACTGGCACCACTCTCCTGGCACTaGTCACAAGCAATCCGCACGTCCAGGGAACTCTTTCCCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FFLPRSTRLAPLSWH*SQAIRTSRELFPWS Trigger: GGACCAGGGAAAGAGTTCCCTGGACGTGCGGATTGCTTGTGAGCAGTGCCAGGAGAGTGGTGCCAGTCTAGTGCTTCTGGGCAAGAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS CCA 90 bp | CGTCCAGGGAACTCTTTCCCTGGTCCAGCAGGCGCTGGATGCTGCTaGACACTGGAAAGATGTGCCAGGTACTCTTCCGAGCATCAACTA | + |
|
Preference number: 5 (lower is better) Translates to: RPGNSFPGPAGAGCC*TLERCARYSSEHQL Trigger: TAGTTGATGCTCGGAAGAGTACCTGGCACATCTTTCCAGTGTCCAGCAGCATCCAGCGCCTGCTGGACCAGGGAAAGAGTTCCCTGGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS GCA 90 bp | TTCCTGGCTGTGCCTGACTCGGCAAAGGTGATGATCTCCGAGGTCTaGTCCATGAGTTCATTCATTTCGGCCCTCCTGCCAATGTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLAVPDSAKVMISEV*SMSSFISALLPMSS Trigger: GGACGACATTGGCAGGAGGGCCGAAATGAATGAACTCATGGAGCAGACCTCGGAGATCATCACCTTTGCCGAGTCAGGCACAGCCAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS CCA 90 bp | GCCACACTTCTGCACGCTCCACTACTGACAGGTCACTGCCTTCCTTaGAAATCTCAAAGTGCAGTGTCTTCCTGGCTGTGCCTGACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ATLLHAPLLTGHCLP*KSQSAVSSWLCLTR Trigger: CCGAGTCAGGCACAGCCAGGAAGACACTGCACTTTGAGATTTCCAAGGAAGGCAGTGACCTGTCAGTAGTGGAGCGTGCAGAAGTGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS GCA 90 bp | GCCGCCTTGGGCACCGGCTGGGTGACATCGGGTCTCTTCTTCAAGTaGAGCATGTTTAAGATGTGCTTCTTGACAGCCTCTACCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AALGTGWVTSGLFFK*SMFKMCFLTASTIS Trigger: AGAGATGGTAGAGGCTGTCAAGAAGCACATCTTAAACATGCTGCACTTGAAGAAGAGACCCGATGTCACCCAGCCGGTGCCCAAGGCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS GCA 90 bp | CCCTGGTCCAGCAGGCGCTGGATGCTGCTGGACACTGGAAAGATGTaGCAGGTACTCTTCCGAGCATCAACTACTTTCTCTGATAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PWSSRRWMLLDTGKM*QVLFRASTTFSDSN Trigger: GTTGCTATCAGAGAAAGTAGTTGATGCTCGGAAGAGTACCTGGCACATCTTTCCAGTGTCCAGCAGCATCCAGCGCCTGCTGGACCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS CCA 90 bp | GGAACTCTTTCCCTGGTCCAGCAGGCGCTGGATGCTGCTGGACACTaGAAAGATGTGCCAGGTACTCTTCCGAGCATCAACTACTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTLSLVQQALDAAGH*KDVPGTLPSINYFL Trigger: GAGAAAGTAGTTGATGCTCGGAAGAGTACCTGGCACATCTTTCCAGTGTCCAGCAGCATCCAGCGCCTGCTGGACCAGGGAAAGAGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS CCA 90 bp | TTCTTCTTCTTCTTGCCCAGAAGCACTAGACTGGCACCACTCTCCTaGCACTGCTCACAAGCAATCCGCACGTCCAGGGAACTCTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FFFFLPRSTRLAPLS*HCSQAIRTSRELFP Trigger: GGGAAAGAGTTCCCTGGACGTGCGGATTGCTTGTGAGCAGTGCCAGGAGAGTGGTGCCAGTCTAGTGCTTCTGGGCAAGAAGAAGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS-3UTR CAA 90 bp | GCTGAACCTGGACATCCACCTCACCTCTGTGTCCTCAACATGCCATCTGTCCTCAGACGGATGGTGACTTaGGTCCTGGTTCTGTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AEPGHPPHLCVLNMPSVLRRMVT*VLVLLA Trigger: GGCTAACAGAACCAGGACCAAAGTCACCATCCGTCT...GAGGACAGATGGCATGTTGAGGACACAGAGGTGAGGTGGATGTCCAGGTTCAGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS TCA 90 bp | AGCATGTTTAAGATGTGCTTCTTGACAGCCTCTACCATCTCTGGCTaGGAGTTAGGTCCATCCTTCGGAAGGGTGGCCAGCGCACAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SMFKMCFLTASTISG*ELGPSFGRVASAQD Trigger: GTCCTGTGCGCTGGCCACCCTTCCGAAGGATGGACCTAACTCTCAGCCAGAGATGGTAGAGGCTGTCAAGAAGCACATCTTAAACATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS GCA 90 bp | CGCTCCACTACTGACAGGTCACTGCCTTCCTTGGAAATCTCAAAGTaGAGTGTCTTCCTGGCTGTGCCTGACTCGGCAAAGGTGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: RSTTDRSLPSLEISK*SVFLAVPDSAKVMI Trigger: GATCATCACCTTTGCCGAGTCAGGCACAGCCAGGAAGACACTGCACTTTGAGATTTCCAAGGAAGGCAGTGACCTGTCAGTAGTGGAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS GCA 90 bp | TCAGGAAGAGCCACACTTCTGCACGCTCCACTACTGACAGGTCACTaGCTTCCTTGGAAATCTCAAAGTGCAGTGTCTTCCTGGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGRATLLHAPLLTGH*LPWKSQSAVSSWLC Trigger: GCACAGCCAGGAAGACACTGCACTTTGAGATTTCCAAGGAAGGCAGTGACCTGTCAGTAGTGGAGCGTGCAGAAGTGTGGCTCTTCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS-3UTR CAA 90 bp | AACAGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGTTGAGAAGCGCCGCCTaGGGCACCGGCTGGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: NSSEGAKGFSQKLAKLNLLRSAA*GTGWVT Trigger: TGTCACCCAGCCGGTGCCCAAGGCGGCGCTTCTCAA...CAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS TCA 90 bp | CTTGGGGACTTTCAGGAAGAGCCACACTTCTGCACGCTCCACTACTaGCAGGTCACTGCCTTCCTTGGAAATCTCAAAGTGCAGTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGDFQEEPHFCTLHY*QVTAFLGNLKVQCL Trigger: AAGACACTGCACTTTGAGATTTCCAAGGAAGGCAGTGACCTGTCAGTAGTGGAGCGTGCAGAAGTGTGGCTCTTCCTGAAAGTCCCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS GCA 90 bp | CATCTTTCTTCTTCCCATCTCCATCCACCTCTTTCTTCTTCTTCTTaGCCAGAAGCACTAGACTGGCACCACTCTCCTGGCACTGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: HLSSSHLHPPLSSSS*PEALDWHHSPGTAH Trigger: GTGAGCAGTGCCAGGAGAGTGGTGCCAGTCTAGTGCTTCTGGGCAAGAAGAAGAAGAAAGAGGTGGATGGAGATGGGAAGAAGAAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS-3UTR CAA 90 bp | TGCTTCATCTCTGAGCCCTGCCTTAGGATATTTTTCCACATCTTCCTTCATCTGTGCCTGCTATGTGGCTaGGGCACTCCCCCTCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: CFISEPCLRIFFHIFLHLCLLCG*GTPPHN Trigger: ATTGTGAGGGGGAGTGCCCAAGCCACATAGCAGGCA...CAGATGAAGGAAGATGTGGAAAAATATCCTAAGGCAGGGCTCAGAGATGAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR CAA 90 bp | CCTATTAGGTTGCATAGTTCTAGGATCAAAAGCACCTTAACGAAATGTAACTTGAGCTTTCTGATCGCGTaGAGAAGCGCCGCCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PIRLHSSRIKSTLTKCNLSFLIA*RSAALG Trigger: GCCCAAGGCGGCGCTTCTCAACGCGATCAGAAAGCT...CAAGTTACATTTCGTTAAGGTGCTTTTGATCCTAGAACTATGCAACCTAATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR CAA 90 bp | AGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGGACAGGTCACTGCCTTCCTaGGAAATCTCAAAGTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSEGAKGFSQKLAKLNLDRSLPS*EISKCS Trigger: ACTGCACTTTGAGATTTCCAAGGAAGGCAGTGACCT...GTCCAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR CAA 90 bp | GAAGTTGCCAAAAGGCCCACAGGAAATCATATTTTTCAAGTGACACAATCATTTCAGCAAATGTTGACCTaGCCGTCGCACTCCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EVAKRPTGNHIFQVTQSFQQMLT*PSHSKP Trigger: GGGCTTGGAGTGCGACGGCAAGGTCAACATTTGCTG...AAATGATTGTGTCACTTGAAAAATATGATTTCCTGTGGGCCTTTTGGCAACTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR CAA 90 bp | CAAAATAGAATATTAGAGATTTGTACAACTCCCTGGCTCCTGAGTGCTCTCTCCTTCTTACAGCAAATGTaGACCTTGCCGTCGCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: QNRILEICTTPWLLSALSFLQQM*TLPSHS Trigger: GGAGTGCGACGGCAAGGTCAACATTTGCTGTAAGAA...GGAGAGAGCACTCAGGAGCCAGGGAGTTGTACAAATCTCTAATATTCTATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR CAA 90 bp | AACAGTTCAGAGGGCGCTAAAGGTTTTTCACAAAAATTGGCAAAGCTGAACCTGTTCCAGCCAATGTCCTaGAAGCTGACAAAGAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: NSSEGAKGFSQKLAKLNLFQPMS*KLTKNC Trigger: ACAGTTCTTTGTCAGCTTCAAGGACATTGGCTGGAA...CAGGTTCAGCTTTGCCAATTTTTGTGAAAAACCTTTAGCGCCCTCTGAACTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS-3UTR CAA 90 bp | GAAGTTGCCAAAAGGCCCACAGGAAATCATATTTTTCAAGTGACACAATCATTTTCTTTCTTCTTCTTCTaGCCCAGAAGCACTAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: EVAKRPTGNHIFQVTQSFSFFFF*PRSTRL Trigger: CAGTCTAGTGCTTCTGGGCAAGAAGAAGAAGAAAGA...AAATGATTGTGTCACTTGAAAAATATGATTTCCTGTGGGCCTTTTGGCAACTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042603.14 |
||
| CDS TCA 72 bp | TTGCCGTCGCACTCCAAGCCCCGCCTACGCCTGCGATaGGGGTGGTCTTCGGACTGCCTAGCCTGCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LPSHSKPRLRLR*GWSSDCLACSM Trigger: CATGCTGCAGGCTAGGCAGTCCGAAGACCACCCTCATCGCAGGCGTAGGCGGGGCTTGGAGTGCGACGGCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS CCA 72 bp | CTGATCGCGTTGAGAAGCGCCGCCTTGGGCACCGGCTaGGTGACATCGGGTCTCTTCTTCAAGTGCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LIALRSAALGTG*VTSGLFFKCSM Trigger: CATGCTGCACTTGAAGAAGAGACCCGATGTCACCCAGCCGGTGCCCAAGGCGGCGCTTCTCAACGCGATCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS CCA 72 bp | TCACAAGCAATCCGCACGTCCAGGGAACTCTTTCCCTaGTCCAGCAGGCGCTGGATGCTGCTGGACACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SQAIRTSRELFP*SSRRWMLLDTG Trigger: TCCAGTGTCCAGCAGCATCCAGCGCCTGCTGGACCAGGGAAAGAGTTCCCTGGACGTGCGGATTGCTTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS CAA 90 bp | TTGAGTGGAAGGAGAGCGAGGACCCAGAGGTGCCTGCTATGTGGCTaGGGCACTCCCCCTCACAATAATTGGCGTGATAGCCAGAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSGRRARTQRCLLCG*GTPPHNNWRDSQRE Trigger: CTCCCTCTGGCTATCACGCCAATTATTGTGAGGGGGAGTGCCCAAGCCACATAGCAGGCACCTCTGGGTCCTCGCTCTCCTTCCACTCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS TCA 72 bp | GCTGTGACCCCTCATGCGGTAGTGGTTAATGACTGTTaGGTGGAAGGAGAGCGAGGACCCAGAGGTGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AVTPHAVVVNDC*VEGERGPRGAC Trigger: GCAGGCACCTCTGGGTCCTCGCTCTCCTTCCACTCAACAGTCATTAACCACTACCGCATGAGGGGTCACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS GCA 72 bp | GGGAACTCTTTCCCTGGTCCAGCAGGCGCTGGATGCTaGTGGACACTGGAAAGATGTGCCAGGTACTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GNSFPGPAGAGC*WTLERCARYSS Trigger: GGAAGAGTACCTGGCACATCTTTCCAGTGTCCAGCAGCATCCAGCGCCTGCTGGACCAGGGAAAGAGTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS GCA 72 bp | CCAGGGAACTCTTTCCCTGGTCCAGCAGGCGCTGGATaGTGCTGGACACTGGAAAGATGTGCCAGGTACTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGNSFPGPAGAG*CWTLERCARYS Trigger: AGAGTACCTGGCACATCTTTCCAGTGTCCAGCAGCATCCAGCGCCTGCTGGACCAGGGAAAGAGTTCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS CCA 72 bp | TCCCTGGTCCAGCAGGCGCTGGATGCTGCTGGACACTaGAAAGATGTGCCAGGTACTCTTCCGAGCATCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SLVQQALDAAGH*KDVPGTLPSIN Trigger: GTTGATGCTCGGAAGAGTACCTGGCACATCTTTCCAGTGTCCAGCAGCATCCAGCGCCTGCTGGACCAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS CAA 72 bp | AGGAGAGCGAGGACCCAGAGGTGCCTGCTATGTGGCTaGGGCACTCCCCCTCACAATAATTGGCGTGATAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRARTQRCLLCG*GTPPHNNWRDS Trigger: GCTATCACGCCAATTATTGTGAGGGGGAGTGCCCAAGCCACATAGCAGGCACCTCTGGGTCCTCGCTCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS TCA 72 bp | CCCGTGTCCAAGCTGCCCTGTGGGTGCTTCTGCTGCTaGAATAGACGGATGGTGACTTTGGTCCTGGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PVSKLPCGCFCC*NRRMVTLVLVL Trigger: CAGAACCAGGACCAAAGTCACCATCCGTCTATTTCAGCAGCAGAAGCACCCACAGGGCAGCTTGGACACGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS GCA 72 bp | CCCAGAAGCACTAGACTGGCACCACTCTCCTGGCACTaGTCACAAGCAATCCGCACGTCCAGGGAACTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PRSTRLAPLSWH*SQAIRTSRELF Trigger: AAAGAGTTCCCTGGACGTGCGGATTGCTTGTGAGCAGTGCCAGGAGAGTGGTGCCAGTCTAGTGCTTCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS CCA 72 bp | AACTCTTTCCCTGGTCCAGCAGGCGCTGGATGCTGCTaGACACTGGAAAGATGTGCCAGGTACTCTTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: NSFPGPAGAGCC*TLERCARYSSE Trigger: CTCGGAAGAGTACCTGGCACATCTTTCCAGTGTCCAGCAGCATCCAGCGCCTGCTGGACCAGGGAAAGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS GCA 72 bp | GTGCCTGACTCGGCAAAGGTGATGATCTCCGAGGTCTaGTCCATGAGTTCATTCATTTCGGCCCTCCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VPDSAKVMISEV*SMSSFISALLP Trigger: TGGCAGGAGGGCCGAAATGAATGAACTCATGGAGCAGACCTCGGAGATCATCACCTTTGCCGAGTCAGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS CAA 90 bp | AGCCACACTTCTGCACGCTCCACTACTGACAGGTCACTGCCTTCCTaGGAAATCTCAAAGTGCAGTGTCTTCCTGGCTGTGCCTGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: SHTSARSTTDRSLPS*EISKCSVFLAVPDS Trigger: CGAGTCAGGCACAGCCAGGAAGACACTGCACTTTGAGATTTCCAAGGAAGGCAGTGACCTGTCAGTAGTGGAGCGTGCAGAAGTGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS TCA 72 bp | AAGATGTGCTTCTTGACAGCCTCTACCATCTCTGGCTaGGAGTTAGGTCCATCCTTCGGAAGGGTGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KMCFLTASTISG*ELGPSFGRVAS Trigger: GCTGGCCACCCTTCCGAAGGATGGACCTAACTCTCAGCCAGAGATGGTAGAGGCTGTCAAGAAGCACATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS TCA 72 bp | ATCTCCACATACCCGTTCTCCCCCACTTTACCCACATaGAGCTTTCTGATCGCGTTGAGAAGCGCCGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ISTYPFSPTLPT*SFLIALRSAAL Trigger: CAAGGCGGCGCTTCTCAACGCGATCAGAAAGCTTCATGTGGGTAAAGTGGGGGAGAACGGGTATGTGGAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS CAA 72 bp | CTGACAAAGAACTGTTTCTTACAGCAAATGTTGACCTaGCCGTCGCACTCCAAGCCCCGCCTACGCCTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LTKNCFLQQMLT*PSHSKPRLRLR Trigger: TCGCAGGCGTAGGCGGGGCTTGGAGTGCGACGGCAAGGTCAACATTTGCTGTAAGAAACAGTTCTTTGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
||
| CDS GCA 72 bp | GGCACCGGCTGGGTGACATCGGGTCTCTTCTTCAAGTaGAGCATGTTTAAGATGTGCTTCTTGACAGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GTGWVTSGLFFK*SMFKMCFLTAS Trigger: AGAGGCTGTCAAGAAGCACATCTTAAACATGCTGCACTTGAAGAAGAGACCCGATGTCACCCAGCCGGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
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| CDS GCA 72 bp | ACTGACAGGTCACTGCCTTCCTTGGAAATCTCAAAGTaGAGTGTCTTCCTGGCTGTGCCTGACTCGGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: TDRSLPSLEISK*SVFLAVPDSAK Trigger: CTTTGCCGAGTCAGGCACAGCCAGGAAGACACTGCACTTTGAGATTTCCAAGGAAGGCAGTGACCTGTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
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| CDS GCA 72 bp | GCCACACTTCTGCACGCTCCACTACTGACAGGTCACTaGCTTCCTTGGAAATCTCAAAGTGCAGTGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ATLLHAPLLTGH*LPWKSQSAVSS Trigger: GGAAGACACTGCACTTTGAGATTTCCAAGGAAGGCAGTGACCTGTCAGTAGTGGAGCGTGCAGAAGTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
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| CDS GCA 72 bp | AGCAGGCGCTGGATGCTGCTGGACACTGGAAAGATGTaGCAGGTACTCTTCCGAGCATCAACTACTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SRRWMLLDTGKM*QVLFRASTTFS Trigger: AGAGAAAGTAGTTGATGCTCGGAAGAGTACCTGGCACATCTTTCCAGTGTCCAGCAGCATCCAGCGCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
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| CDS CAA 90 bp | CCATCTTTCTTCTTCCCATCTCCATCCACCTCTTTCTTCTTCTTCTaGCCCAGAAGCACTAGACTGGCACCACTCTCCTGGCACTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: PSFFFPSPSTSFFFF*PRSTRLAPLSWHCS Trigger: TGAGCAGTGCCAGGAGAGTGGTGCCAGTCTAGTGCTTCTGGGCAAGAAGAAGAAGAAAGAGGTGGATGGAGATGGGAAGAAGAAAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
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| CDS GCA 72 bp | TGGGGTGGGGGAACTCCTCACTATAATCCAGCAACTTaGCAACAGAAATCCTCTCAGCCAAAGCAAGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: WGGGTPHYNPAT*QQKSSQPKQGH Trigger: ATGCCCTTGCTTTGGCTGAGAGGATTTCTGTTGGCAAGTTGCTGGATTATAGTGAGGAGTTCCCCCACCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
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| CDS CAA 72 bp | TTGAAGCTGACAAAGAACTGTTTCTTACAGCAAATGTaGACCTTGCCGTCGCACTCCAAGCCCCGCCTACGC | + |
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Preference number: 6 (lower is better) Translates to: LKLTKNCFLQQM*TLPSHSKPRLR Trigger: GCGTAGGCGGGGCTTGGAGTGCGACGGCAAGGTCAACATTTGCTGTAAGAAACAGTTCTTTGTCAGCTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042603.14 ENSMUST00000164993.2 |
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