RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for INHA (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032968

Ensembl transcript IDs: ENSMUST00000037330.5

Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAAGTGGAAACTGTCTACTTTCCACACTCTGTCCTCCTCCTAGCTaGGGACCCTGGGGTGGTGAATTGACTGTGGCCATCGGCTATGGG +
Preference number: 1 (lower is better)
Translates to: GSGNCLLSTLCPPPS*GPWGGELTVAIGYG
Trigger: CCCATAGCCGATGGCCACAGTCAATTCACCACCCCAGGGTCCTCAGCTAGGAGGAGGACAGAGTGTGGAAAGTAGACAGTTTCCACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
3UTR-3UTR CCA 90 bp CTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAAGTGTGGCCATCGGCTATaGGAGGAGGAGGCGGAGGTG +
Preference number: 2 (lower is better)
Translates to: LGGAGYGSLILKDVGKRKCGHRL*EEEAEV
Trigger: CACCTCCGCCTCCTCCTCCCATAGCCGATGGCCACA...CTTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
3UTR-3UTR TCA 90 bp AAAGATGTAGGGAAAAGGAAGTGGAAACTGTCTACTTTCCACACTCTGTCCTCCAGGACCCTGGGGTGGTaGATTGACTGTGGCCATCGG +
Preference number: 2 (lower is better)
Translates to: KDVGKRKWKLSTFHTLSSRTLGW*IDCGHR
Trigger: CCGATGGCCACAGTCAATTCACCACCCCAGGGTCCT...GGAGGACAGAGTGTGGAAAGTAGACAGTTTCCACTTCCTTTTCCCTACATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
3UTR-3UTR TCA 90 bp AAAGATGTAGGGAAAAGGAAGTGGAAACTGTCTACTTTCCACACTCTGTCCTCCCCTGGGGTGGTGAATTaGCTGTGGCCATCGGCTATG +
Preference number: 2 (lower is better)
Translates to: KDVGKRKWKLSTFHTLSSPGVVN*LWPSAM
Trigger: CATAGCCGATGGCCACAGTCAATTCACCACCCCAGG...GGAGGACAGAGTGTGGAAAGTAGACAGTTTCCACTTCCTTTTCCCTACATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
3UTR TCA 72 bp GTCCTCCTCCTAGCTGAGGACCCTGGGGTGGTGAATTaGCTGTGGCCATCGGCTATGGGAGGAGGAGGCGGA +
Preference number: 3 (lower is better)
Translates to: VLLLAEDPGVVN*LWPSAMGGGGG
Trigger: TCCGCCTCCTCCTCCCATAGCCGATGGCCACAGTCAATTCACCACCCCAGGGTCCTCAGCTAGGAGGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
3UTR CCA 72 bp TTATTGTTATCCACAGGACCTGGGTGGAGCAGGATATaGATCCCTCATACTGAAAGATGTAGGGAAAAGGAA +
Preference number: 3 (lower is better)
Translates to: LLLSTGPGWSRI*IPHTERCREKE
Trigger: TTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGGTCCTGTGGATAACAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CCA 90 bp GAAACTGTCTACTTTCCACACTCTGTCCTCCTCCTAGCTGAGGACCCTGGGGTGCCTGGGCAAGCCCTCTaGCAGCTGGCTGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: ETVYFPHSVLLLAEDPGVPGQAL*QLAGPH
Trigger: GTGAGGACCAGCCAGCTGCCAGAGGGCTTGCCCAGG...CACCCCAGGGTCCTCAGCTAGGAGGAGGACAGAGTGTGGAAAGTAGACAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CCA 90 bp GTCTACTTTCCACACTCTGTCCTCCTCCTAGCTGAGGACCCTGGGGTGGTGAATAAGCCCTCTGGCAGCTaGCTGGTCCTCACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: VYFPHSVLLLAEDPGVVNKPSGS*LVLTGG
Trigger: GCCACCTGTGAGGACCAGCCAGCTGCCAGAGGGCTT...ATTCACCACCCCAGGGTCCTCAGCTAGGAGGAGGACAGAGTGTGGAAAGTAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR GCA 90 bp GTCTACTTTCCACACTCTGTCCTCCTCCTAGCTGAGGACCCTGGGGTGGTGAATTATTGGCGGCTGCTGTaGTCTTCCTGCCTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VYFPHSVLLLAEDPGVVNYWRLL*SSCLGL
Trigger: CAGGCCTAGGCAGGAAGAGCACAGCAGCCGCCAATA...ATTCACCACCCCAGGGTCCTCAGCTAGGAGGAGGACAGAGTGTGGAAAGTAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CCA 90 bp GAAACTGTCTACTTTCCACACTCTGTCCTCCTCCTAGCTGAGGACCCTGGGGTGGTGTGGAACCACAGCTaGGCTGAAGTCACCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ETVYFPHSVLLLAEDPGVVWNHS*AEVTWW
Trigger: CCACCAGGTGACTTCAGCCCAGCTGTGGTTCCACAC...CACCCCAGGGTCCTCAGCTAGGAGGAGGACAGAGTGTGGAAAGTAGACAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CCA 90 bp CCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAACCTCTGGCAGCTGGCTaGTCCTCACAGGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: PGWSRIWIPHTERCREKEPLAAG*SSQVAP
Trigger: AGGTGCCACCTGTGAGGACCAGCCAGCTGCCAGAGG...TTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CCA 90 bp CTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAAGGGGGCGCAGAGCTATTaGCGGCTGCTGTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LGGAGYGSLILKDVGKRKGAQSY*RLLCSS
Trigger: GGAAGAGCACAGCAGCCGCCAATAGCTCTGCGCCCC...CTTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CCA 90 bp TTGTTATCCACAGGACCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGAGCAGCAACACCAGGATaGGGTGGGTCAGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LLSTGPGWSRIWIPHTERAATPG*GGSAEG
Trigger: TCCCTCTGCTGACCCACCCCATCCTGGTGTTGCTGC...TCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGGTCCTGTGGATAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CCA 90 bp GGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAAGTGGGGGCAGGTCAGATGTaGGCATCCCGCAGCTACCAT +
Preference number: 4 (lower is better)
Translates to: GWSRIWIPHTERCREKEVGAGQM*ASRSYH
Trigger: ATGGTAGCTGCGGGATGCCCACATCTGACCTGCCCC...CACTTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR TCA 90 bp CCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAACAGAGGTCCTGTGCATaGAACCCCCAACGGCATGTC +
Preference number: 4 (lower is better)
Translates to: PGWSRIWIPHTERCREKEQRSCA*NPQRHV
Trigger: GACATGCCGTTGGGGGTTTCATGCACAGGACCTCTG...TTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR TCA 90 bp AAAGATGTAGGGAAAAGGAAGTGGAAACTGTCTACTTTCCACACTCTGTCCTCCGAACCACAGCTGGGCTaGAGTCACCTGGTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: KDVGKRKWKLSTFHTLSSEPQLG*SHLVAA
Trigger: CGCAGCCACCAGGTGACTTCAGCCCAGCTGTGGTTC...GGAGGACAGAGTGTGGAAAGTAGACAGTTTCCACTTCCTTTTCCCTACATCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CCA 90 bp CCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAACTGCCTAGGCCTGTGTaGAACCACAGCTGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: PGWSRIWIPHTERCREKELPRPV*NHSWAE
Trigger: TTCAGCCCAGCTGTGGTTCCACACAGGCCTAGGCAG...TTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CCA 90 bp GGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAAGTGCGAGCAGGAACAGAGTaGGCATCGCAGCAGCAACAC +
Preference number: 4 (lower is better)
Translates to: GWSRIWIPHTERCREKEVRAGTE*ASQQQH
Trigger: GTGTTGCTGCTGCGATGCCCACTCTGTTCCTGCTCG...CACTTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CCA 90 bp CCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAATGGGCTGAAGTCACCTaGTGGCTGCGTATGTGTTGG +
Preference number: 4 (lower is better)
Translates to: PGWSRIWIPHTERCREKEWAEVT*WLRMCW
Trigger: CCAACACATACGCAGCCACCAGGTGACTTCAGCCCA...TTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CCA 90 bp TATTGTTATCCACAGGACCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAACAGCACAGCAGGGCTTaGCCCCTGGCACCAAAAACA +
Preference number: 4 (lower is better)
Translates to: YCYPQDLGGAGYGSLILKQHSRA*PLAPKT
Trigger: TGTTTTTGGTGCCAGGGGCCAAGCCCTGCTGTGCTG...TTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGGTCCTGTGGATAACAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR TCA 90 bp CTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAAGGCCGGAATACATAAGTaGAGAGGCCTTCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LGGAGYGSLILKDVGKRKAGIHK*RGLPQP
Trigger: AGGCTGAGGAAGGCCTCTTCACTTATGTATTCCGGC...CTTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CCA 90 bp AAGGAAGTGGAAACTGTCTACTTTCCACACTCTGTCCTCCTCCTAGCTGAGGACGGGAAAAGGATAGCCTaGGAGACATCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KEVETVYFPHSVLLLAEDGKRIA*ETSSSS
Trigger: AGAGGAGGAAGATGTCTCCCAGGCTATCCTTTTCCC...GTCCTCAGCTAGGAGGAGGACAGAGTGTGGAAAGTAGACAGTTTCCACTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CCA 90 bp CCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAATCCCAGCCCAGCTCTTaGAAGGAGATATTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PGWSRIWIPHTERCREKESQPSS*KEILRA
Trigger: TGCTCTCAATATCTCCTTCCAAGAGCTGGGCTGGGA...TTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CCA 90 bp TATTGTTATCCACAGGACCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGACATCTTCCTCCTCTaGTTCAGAGGTCCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: YCYPQDLGGAGYGSLILKDIFLL*FRGPVH
Trigger: ATGCACAGGACCTCTGAACCAGAGGAGGAAGATGTC...TTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGGTCCTGTGGATAACAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR TCA 90 bp AAAGATGTAGGGAAAAGGAAGTGGAAACTGTCTACTTTCCACACTCTGTCCTCCCTTGGAAGGAGATATTaGGAGCAGCTCGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: KDVGKRKWKLSTFHTLSSLGRRY*EQLDGR
Trigger: TCTGCCATCGAGCTGCTCTCAATATCTCCTTCCAAG...GGAGGACAGAGTGTGGAAAGTAGACAGTTTCCACTTCCTTTTCCCTACATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR TCA 90 bp CTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAAGGTACCATCTCATACTTaGAAGAGTAACCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: LGGAGYGSLILKDVGKRKVPSHT*KSNLHL
Trigger: CAGATGGAGGTTACTCTTTCAAGTATGAGATGGTAC...CTTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR TCA 90 bp TTGTTATCCACAGGACCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGAATACAAGCACAGTGTTaGGTAATAAGGTTGGGTACC +
Preference number: 4 (lower is better)
Translates to: LLSTGPGWSRIWIPHTERIQAQC*VIRLGT
Trigger: GGTACCCAACCTTATTACTCAACACTGTGCTTGTAT...TCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGGTCCTGTGGATAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CCA 90 bp GAACGCCGGGCCCTCTCCCCCGCACTGGGTGCTCGAGCCCTAGTGTaGGCTACCAGGAAAGGAGTGGTCTCAGGCCGGCCCGAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: ERRALSPALGARALV*ATRKGVVSGRPEQE
Trigger: TTCCTGCTCGGGCCGGCCTGAGACCACTCCTTTCCTGGTAGCCCACACTAGGGCTCGAGCACCCAGTGCGGGGGAGAGGGCCCGGCGTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS TCA 90 bp CAAGCGCAAAGCCGCAGGAGACCAAGGCCAAGGCACGGAGGGAGTTaGACGCCGGGCCCTCTCCCCCGCACTGGGTGCTCGAGCCCTAGT +
Preference number: 5 (lower is better)
Translates to: QAQSRRRPRPRHGGS*TPGPLPRTGCSSPS
Trigger: ACTAGGGCTCGAGCACCCAGTGCGGGGGAGAGGGCCCGGCGTTCAACTCCCTCCGTGCCTTGGCCTTGGTCTCCTGCGGCTTTGCGCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS GCA 90 bp ACCAGGATGGGGTGGGTCAGCAGAGGGAAAGCAGACGCCGCCAGGTaGAGTACAGCCCAGCGTGGCGGGCCCTGTCCCAAGGACACAGGC +
Preference number: 5 (lower is better)
Translates to: TRMGWVSRGKADAAR*STAQRGGPCPKDTG
Trigger: GCCTGTGTCCTTGGGACAGGGCCCGCCACGCTGGGCTGTACTGCACCTGGCGGCGTCTGCTTTCCCTCTGCTGACCCACCCCATCCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CCA 90 bp GCGGCTGCTGTGCTCTTCCTGCCTAGGCCTGTGTGGAACCACAGCTaGGCTGAAGTCACCTGGTGGCTGCGTATGTGTTGGGATGGCCGG +
Preference number: 5 (lower is better)
Translates to: AAAVLFLPRPVWNHS*AEVTWWLRMCWDGR
Trigger: CCGGCCATCCCAACACATACGCAGCCACCAGGTGACTTCAGCCCAGCTGTGGTTCCACACAGGCCTAGGCAGGAAGAGCACAGCAGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CCA 90 bp CGGTCCCAGCCCAGCTCTTGGAAGGAGATATTGAGAGCAGCTCGATaGCAGAAGGCATGCGCAGCGGGTTCCTCGGGAGGCCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: RSQPSSWKEILRAAR*QKACAAGSSGGLCS
Trigger: GCTGCAGAGGCCTCCCGAGGAACCCGCTGCGCATGCCTTCTGCCATCGAGCTGCTCTCAATATCTCCTTCCAAGAGCTGGGCTGGGACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CCA 90 bp GCCTTCACCTTGGCCAGGACGAGCTCCCGGACAAGTTCGGGTCCCTaGCAGCTGTCCACATCCCGTAGGGTCAACAGCAAAAGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: AFTLARTSSRTSSGP*QLSTSRRVNSKRSS
Trigger: GCTGCTCCTTTTGCTGTTGACCCTACGGGATGTGGACAGCTGCCAGGGACCCGAACTTGTCCGGGAGCTCGTCCTGGCCAAGGTGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CCA 90 bp CCATTGCTGGGGGCCCCAAGGCATCTAGGAATAGAGCCTTCACCTTaGCCAGGACGAGCTCCCGGACAAGTTCGGGTCCCTGGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: PLLGAPRHLGIEPSP*PGRAPGQVRVPGSC
Trigger: ACAGCTGCCAGGGACCCGAACTTGTCCGGGAGCTCGTCCTGGCCAAGGTGAAGGCTCTATTCCTAGATGCCTTGGGGCCCCCAGCAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CCA 90 bp AAGAGGCCTTCCTCAGCCTCCTGGGCAAGCCCTCTGGCAGCTGGCTaGTCCTCACAGGTGGCACCTGTAGCTGGGAAAAGGATAGCCTGG +
Preference number: 5 (lower is better)
Translates to: KRPSSASWASPLAAG*SSQVAPVAGKRIAW
Trigger: CCAGGCTATCCTTTTCCCAGCTACAGGTGCCACCTGTGAGGACCAGCCAGCTGCCAGAGGGCTTGCCCAGGAGGCTGAGGAAGGCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS TCA 90 bp GGTGTACGATCCAGCGGTCCCAGCCCAGCTCTTGGAAGGAGATATTaGGAGCAGCTCGATGGCAGAAGGCATGCGCAGCGGGTTCCTCGG +
Preference number: 5 (lower is better)
Translates to: GVRSSGPSPALGRRY*EQLDGRRHAQRVPR
Trigger: CCGAGGAACCCGCTGCGCATGCCTTCTGCCATCGAGCTGCTCTCAATATCTCCTTCCAAGAGCTGGGCTGGGACCGCTGGATCGTACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS GCA 90 bp GCACCAGAAGATCTAGCAGGGGCGCAGAGCTATTGGCGGCTGCTGTaGTCTTCCTGCCTAGGCCTGTGTGGAACCACAGCTGGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: APEDLAGAQSYWRLL*SSCLGLCGTTAGLK
Trigger: CTTCAGCCCAGCTGTGGTTCCACACAGGCCTAGGCAGGAAGAGCACAGCAGCCGCCAATAGCTCTGCGCCCCTGCTAGATCTTCTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS GCA 90 bp AGCTCTTGGAAGGAGATATTGAGAGCAGCTCGATGGCAGAAGGCATaGGCAGCGGGTTCCTCGGGAGGCCTCTGCAGCAAGCGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: SSWKEILRAARWQKA*AAGSSGGLCSKRKA
Trigger: GGCTTTGCGCTTGCTGCAGAGGCCTCCCGAGGAACCCGCTGCGCATGCCTTCTGCCATCGAGCTGCTCTCAATATCTCCTTCCAAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CCA 90 bp GCAGAGCTATTGGCGGCTGCTGTGCTCTTCCTGCCTAGGCCTGTGTaGAACCACAGCTGGGCTGAAGTCACCTGGTGGCTGCGTATGTGT +
Preference number: 5 (lower is better)
Translates to: AELLAAAVLFLPRPV*NHSWAEVTWWLRMC
Trigger: ACACATACGCAGCCACCAGGTGACTTCAGCCCAGCTGTGGTTCCACACAGGCCTAGGCAGGAAGAGCACAGCAGCCGCCAATAGCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS TCA 90 bp TCACCTGGTGGCTGCGTATGTGTTGGGATGGCCGGAATACATAAGTaGAGAGGCCTTCCTCAGCCTCCTGGGCAAGCCCTCTGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: SPGGCVCVGMAGIHK*RGLPQPPGQALWQL
Trigger: CAGCTGCCAGAGGGCTTGCCCAGGAGGCTGAGGAAGGCCTCTTCACTTATGTATTCCGGCCATCCCAACACATACGCAGCCACCAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CCA 90 bp CCCCAGATGATAGCACCAGAAGATCTAGCAGGGGCGCAGAGCTATTaGCGGCTGCTGTGCTCTTCCTGCCTAGGCCTGTGTGGAACCACA +
Preference number: 5 (lower is better)
Translates to: PQMIAPEDLAGAQSY*RLLCSSCLGLCGTT
Trigger: TGTGGTTCCACACAGGCCTAGGCAGGAAGAGCACAGCAGCCGCCAATAGCTCTGCGCCCCTGCTAGATCTTCTGGTGCTATCATCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CCA 90 bp ATGAAACTGGGAGGGTGTACGATCCAGCGGTCCCAGCCCAGCTCTTaGAAGGAGATATTGAGAGCAGCTCGATGGCAGAAGGCATGCGCA +
Preference number: 5 (lower is better)
Translates to: MKLGGCTIQRSQPSS*KEILRAARWQKACA
Trigger: TGCGCATGCCTTCTGCCATCGAGCTGCTCTCAATATCTCCTTCCAAGAGCTGGGCTGGGACCGCTGGATCGTACACCCTCCCAGTTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CCA 90 bp GGCTGGTCCTCACAGGTGGCACCTGTAGCTGGGAAAAGGATAGCCTaGGAGACATCTTCCTCCTCTGGTTCAGAGGTCCTGTGCATGAAA +
Preference number: 5 (lower is better)
Translates to: GWSSQVAPVAGKRIA*ETSSSSGSEVLCMK
Trigger: TTTCATGCACAGGACCTCTGAACCAGAGGAGGAAGATGTCTCCCAGGCTATCCTTTTCCCAGCTACAGGTGCCACCTGTGAGGACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS GCA 90 bp AGGATAGCCTGGGAGACATCTTCCTCCTCTGGTTCAGAGGTCCTGTaGATGAAACCCCCAACGGCATGTCTTCGAGGCAGACGCCTTATT +
Preference number: 5 (lower is better)
Translates to: RIAWETSSSSGSEVL*MKPPTACLRGRRLI
Trigger: AATAAGGCGTCTGCCTCGAAGACATGCCGTTGGGGGTTTCATGCACAGGACCTCTGAACCAGAGGAGGAAGATGTCTCCCAGGCTATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CCA 90 bp ACCTGTAGCTGGGAAAAGGATAGCCTGGGAGACATCTTCCTCCTCTaGTTCAGAGGTCCTGTGCATGAAACCCCCAACGGCATGTCTTCG +
Preference number: 5 (lower is better)
Translates to: TCSWEKDSLGDIFLL*FRGPVHETPNGMSS
Trigger: CGAAGACATGCCGTTGGGGGTTTCATGCACAGGACCTCTGAACCAGAGGAGGAAGATGTCTCCCAGGCTATCCTTTTCCCAGCTACAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CAA 90 bp CCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAAAGGGGCGCAGAGCTATaGGCGGCTGCTGTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: PGWSRIWIPHTERCREKERGAEL*AAAVLF
Trigger: GAAGAGCACAGCAGCCGCCAATAGCTCTGCGCCCCT...TTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CAA 90 bp GGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAAGTGGCAGCACAGCAGGGCTaGGCCCCTGGCACCAAAAAC +
Preference number: 5 (lower is better)
Translates to: GWSRIWIPHTERCREKEVAAQQG*APGTKN
Trigger: GTTTTTGGTGCCAGGGGCCAAGCCCTGCTGTGCTGC...CACTTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CAA 90 bp AAAGATGTAGGGAAAAGGAAGTGGAAACTGTCTACTTTCCACACTCTGTCCTCCAATAGAGCCTTCACCTaGGCCAGGACGAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: KDVGKRKWKLSTFHTLSSNRAFT*ARTSSR
Trigger: CCGGGAGCTCGTCCTGGCCAAGGTGAAGGCTCTATT...GGAGGACAGAGTGTGGAAAGTAGACAGTTTCCACTTCCTTTTCCCTACATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CAA 90 bp AAAGATGTAGGGAAAAGGAAGTGGAAACTGTCTACTTTCCACACTCTGTCCTCCGTCCCAGCCCAGCTCTaGGAAGGAGATATTGAGAGC +
Preference number: 5 (lower is better)
Translates to: KDVGKRKWKLSTFHTLSSVPAQL*EGDIES
Trigger: GCTCTCAATATCTCCTTCCAAGAGCTGGGCTGGGAC...GGAGGACAGAGTGTGGAAAGTAGACAGTTTCCACTTCCTTTTCCCTACATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS-3UTR CAA 90 bp TTGTTATCCACAGGACCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGAGATACAAGCACAGTGTaGAGTAATAAGGTTGGGTAC +
Preference number: 5 (lower is better)
Translates to: LLSTGPGWSRIWIPHTERDTSTV*SNKVGY
Trigger: GTACCCAACCTTATTACTCAACACTGTGCTTGTATC...TCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGGTCCTGTGGATAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS TCA 72 bp AGCCGCAGGAGACCAAGGCCAAGGCACGGAGGGAGTTaGACGCCGGGCCCTCTCCCCCGCACTGGGTGCTCG +
Preference number: 6 (lower is better)
Translates to: SRRRPRPRHGGS*TPGPLPRTGCS
Trigger: CGAGCACCCAGTGCGGGGGAGAGGGCCCGGCGTTCAACTCCCTCCGTGCCTTGGCCTTGGTCTCCTGCGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS GCA 72 bp GGGTGGGTCAGCAGAGGGAAAGCAGACGCCGCCAGGTaGAGTACAGCCCAGCGTGGCGGGCCCTGTCCCAAG +
Preference number: 6 (lower is better)
Translates to: GWVSRGKADAAR*STAQRGGPCPK
Trigger: CTTGGGACAGGGCCCGCCACGCTGGGCTGTACTGCACCTGGCGGCGTCTGCTTTCCCTCTGCTGACCCACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CAA 72 bp AAGCCGCAGGAGACCAAGGCCAAGGCACGGAGGGAGTaGAACGCCGGGCCCTCTCCCCCGCACTGGGTGCTC +
Preference number: 6 (lower is better)
Translates to: KPQETKAKARRE*NAGPSPPHWVL
Trigger: GAGCACCCAGTGCGGGGGAGAGGGCCCGGCGTTCAACTCCCTCCGTGCCTTGGCCTTGGTCTCCTGCGGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CCA 72 bp GAAAGCAGACGCCGCCAGGTGCAGTACAGCCCAGCGTaGCGGGCCCTGTCCCAAGGACACAGGCACAGCCAT +
Preference number: 6 (lower is better)
Translates to: ESRRRQVQYSPA*RALSQGHRHSH
Trigger: ATGGCTGTGCCTGTGTCCTTGGGACAGGGCCCGCCACGCTGGGCTGTACTGCACCTGGCGGCGTCTGCTTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS GCA 72 bp CAGAAGGCATGCGCAGCGGGTTCCTCGGGAGGCCTCTaGAGCAAGCGCAAAGCCGCAGGAGACCAAGGCCAA +
Preference number: 6 (lower is better)
Translates to: QKACAAGSSGGL*SKRKAAGDQGQ
Trigger: TTGGCCTTGGTCTCCTGCGGCTTTGCGCTTGCTGCAGAGGCCTCCCGAGGAACCCGCTGCGCATGCCTTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS GCA 72 bp CTCCATCTGAGGTGGTTCGGACGCGTAGGGACCTCATaGTCCCCGGAAGAGCAGCACAGCAGGGCTTGGCCC +
Preference number: 6 (lower is better)
Translates to: LHLRWFGRVGTS*SPEEQHSRAWP
Trigger: GGGCCAAGCCCTGCTGTGCTGCTCTTCCGGGGAGCATGAGGTCCCTACGCGTCCGAACCACCTCAGATGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CAA 90 bp TCCATTGCTGGGGGCCCCAAGGCATCTAGGAATAGAGCCTTCACCTaGGCCAGGACGAGCTCCCGGACAAGTTCGGGTCCCTGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: SIAGGPKASRNRAFT*ARTSSRTSSGPWQL
Trigger: CAGCTGCCAGGGACCCGAACTTGTCCGGGAGCTCGTCCTGGCCAAGGTGAAGGCTCTATTCCTAGATGCCTTGGGGCCCCCAGCAATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CCA 72 bp GGGGCCCCAAGGCATCTAGGAATAGAGCCTTCACCTTaGCCAGGACGAGCTCCCGGACAAGTTCGGGTCCCT +
Preference number: 6 (lower is better)
Translates to: GAPRHLGIEPSP*PGRAPGQVRVP
Trigger: AGGGACCCGAACTTGTCCGGGAGCTCGTCCTGGCCAAGGTGAAGGCTCTATTCCTAGATGCCTTGGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CAA 90 bp GGGTGTACGATCCAGCGGTCCCAGCCCAGCTCTTGGAAGGAGATATaGAGAGCAGCTCGATGGCAGAAGGCATGCGCAGCGGGTTCCTCG +
Preference number: 6 (lower is better)
Translates to: GCTIQRSQPSSWKEI*RAARWQKACAAGSS
Trigger: CGAGGAACCCGCTGCGCATGCCTTCTGCCATCGAGCTGCTCTCAATATCTCCTTCCAAGAGCTGGGCTGGGACCGCTGGATCGTACACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS TCA 72 bp TCCAGCGGTCCCAGCCCAGCTCTTGGAAGGAGATATTaGGAGCAGCTCGATGGCAGAAGGCATGCGCAGCGG +
Preference number: 6 (lower is better)
Translates to: SSGPSPALGRRY*EQLDGRRHAQR
Trigger: CCGCTGCGCATGCCTTCTGCCATCGAGCTGCTCTCAATATCTCCTTCCAAGAGCTGGGCTGGGACCGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS GCA 72 bp GATCTAGCAGGGGCGCAGAGCTATTGGCGGCTGCTGTaGTCTTCCTGCCTAGGCCTGTGTGGAACCACAGCT +
Preference number: 6 (lower is better)
Translates to: DLAGAQSYWRLL*SSCLGLCGTTA
Trigger: AGCTGTGGTTCCACACAGGCCTAGGCAGGAAGAGCACAGCAGCCGCCAATAGCTCTGCGCCCCTGCTAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CCA 72 bp CCCAGCTCTTGGAAGGAGATATTGAGAGCAGCTCGATaGCAGAAGGCATGCGCAGCGGGTTCCTCGGGAGGC +
Preference number: 6 (lower is better)
Translates to: PSSWKEILRAAR*QKACAAGSSGG
Trigger: GCCTCCCGAGGAACCCGCTGCGCATGCCTTCTGCCATCGAGCTGCTCTCAATATCTCCTTCCAAGAGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CAA 90 bp CCCCCAGATGATAGCACCAGAAGATCTAGCAGGGGCGCAGAGCTATaGGCGGCTGCTGTGCTCTTCCTGCCTAGGCCTGTGTGGAACCAC +
Preference number: 6 (lower is better)
Translates to: PPDDSTRRSSRGAEL*AAAVLFLPRPVWNH
Trigger: GTGGTTCCACACAGGCCTAGGCAGGAAGAGCACAGCAGCCGCCAATAGCTCTGCGCCCCTGCTAGATCTTCTGGTGCTATCATCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS GCA 72 bp AAGGAGATATTGAGAGCAGCTCGATGGCAGAAGGCATaGGCAGCGGGTTCCTCGGGAGGCCTCTGCAGCAAG +
Preference number: 6 (lower is better)
Translates to: KEILRAARWQKA*AAGSSGGLCSK
Trigger: CTTGCTGCAGAGGCCTCCCGAGGAACCCGCTGCGCATGCCTTCTGCCATCGAGCTGCTCTCAATATCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CCA 72 bp GTGCTCTTCCTGCCTAGGCCTGTGTGGAACCACAGCTaGGCTGAAGTCACCTGGTGGCTGCGTATGTGTTGG +
Preference number: 6 (lower is better)
Translates to: VLFLPRPVWNHS*AEVTWWLRMCW
Trigger: CCAACACATACGCAGCCACCAGGTGACTTCAGCCCAGCTGTGGTTCCACACAGGCCTAGGCAGGAAGAGCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CAA 72 bp GATAGCACCAGAAGATCTAGCAGGGGCGCAGAGCTATaGGCGGCTGCTGTGCTCTTCCTGCCTAGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: DSTRRSSRGAEL*AAAVLFLPRPV
Trigger: CACAGGCCTAGGCAGGAAGAGCACAGCAGCCGCCAATAGCTCTGCGCCCCTGCTAGATCTTCTGGTGCTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CAA 90 bp GATGAAACTGGGAGGGTGTACGATCCAGCGGTCCCAGCCCAGCTCTaGGAAGGAGATATTGAGAGCAGCTCGATGGCAGAAGGCATGCGC +
Preference number: 6 (lower is better)
Translates to: DETGRVYDPAVPAQL*EGDIESSSMAEGMR
Trigger: GCGCATGCCTTCTGCCATCGAGCTGCTCTCAATATCTCCTTCCAAGAGCTGGGCTGGGACCGCTGGATCGTACACCCTCCCAGTTTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CCA 72 bp ATAGCACCAGAAGATCTAGCAGGGGCGCAGAGCTATTaGCGGCTGCTGTGCTCTTCCTGCCTAGGCCTGTGT +
Preference number: 6 (lower is better)
Translates to: IAPEDLAGAQSY*RLLCSSCLGLC
Trigger: ACACAGGCCTAGGCAGGAAGAGCACAGCAGCCGCCAATAGCTCTGCGCCCCTGCTAGATCTTCTGGTGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS GCA 72 bp TGGGAGACATCTTCCTCCTCTGGTTCAGAGGTCCTGTaGATGAAACCCCCAACGGCATGTCTTCGAGGCAGA +
Preference number: 6 (lower is better)
Translates to: WETSSSSGSEVL*MKPPTACLRGR
Trigger: TCTGCCTCGAAGACATGCCGTTGGGGGTTTCATGCACAGGACCTCTGAACCAGAGGAGGAAGATGTCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5
CDS CCA 72 bp TGGGAAAAGGATAGCCTGGGAGACATCTTCCTCCTCTaGTTCAGAGGTCCTGTGCATGAAACCCCCAACGGC +
Preference number: 6 (lower is better)
Translates to: WEKDSLGDIFLL*FRGPVHETPNG
Trigger: GCCGTTGGGGGTTTCATGCACAGGACCTCTGAACCAGAGGAGGAAGATGTCTCCCAGGCTATCCTTTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037330.5