Pregenerated sensors for INHA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032968Ensembl transcript IDs: ENSMUST00000037330.5
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GGAAGTGGAAACTGTCTACTTTCCACACTCTGTCCTCCTCCTAGCTaGGGACCCTGGGGTGGTGAATTGACTGTGGCCATCGGCTATGGG | + |
Preference number: 1 (lower is better) Translates to: GSGNCLLSTLCPPPS*GPWGGELTVAIGYG Trigger: CCCATAGCCGATGGCCACAGTCAATTCACCACCCCAGGGTCCTCAGCTAGGAGGAGGACAGAGTGTGGAAAGTAGACAGTTTCCACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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3UTR-3UTR CCA 90 bp | CTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAAGTGTGGCCATCGGCTATaGGAGGAGGAGGCGGAGGTG | + |
Preference number: 2 (lower is better) Translates to: LGGAGYGSLILKDVGKRKCGHRL*EEEAEV Trigger: CACCTCCGCCTCCTCCTCCCATAGCCGATGGCCACA...CTTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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3UTR-3UTR TCA 90 bp | AAAGATGTAGGGAAAAGGAAGTGGAAACTGTCTACTTTCCACACTCTGTCCTCCAGGACCCTGGGGTGGTaGATTGACTGTGGCCATCGG | + |
Preference number: 2 (lower is better) Translates to: KDVGKRKWKLSTFHTLSSRTLGW*IDCGHR Trigger: CCGATGGCCACAGTCAATTCACCACCCCAGGGTCCT...GGAGGACAGAGTGTGGAAAGTAGACAGTTTCCACTTCCTTTTCCCTACATCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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3UTR-3UTR TCA 90 bp | AAAGATGTAGGGAAAAGGAAGTGGAAACTGTCTACTTTCCACACTCTGTCCTCCCCTGGGGTGGTGAATTaGCTGTGGCCATCGGCTATG | + |
Preference number: 2 (lower is better) Translates to: KDVGKRKWKLSTFHTLSSPGVVN*LWPSAM Trigger: CATAGCCGATGGCCACAGTCAATTCACCACCCCAGG...GGAGGACAGAGTGTGGAAAGTAGACAGTTTCCACTTCCTTTTCCCTACATCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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3UTR TCA 72 bp | GTCCTCCTCCTAGCTGAGGACCCTGGGGTGGTGAATTaGCTGTGGCCATCGGCTATGGGAGGAGGAGGCGGA | + |
Preference number: 3 (lower is better) Translates to: VLLLAEDPGVVN*LWPSAMGGGGG Trigger: TCCGCCTCCTCCTCCCATAGCCGATGGCCACAGTCAATTCACCACCCCAGGGTCCTCAGCTAGGAGGAGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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3UTR CCA 72 bp | TTATTGTTATCCACAGGACCTGGGTGGAGCAGGATATaGATCCCTCATACTGAAAGATGTAGGGAAAAGGAA | + |
Preference number: 3 (lower is better) Translates to: LLLSTGPGWSRI*IPHTERCREKE Trigger: TTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGGTCCTGTGGATAACAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CCA 90 bp | GAAACTGTCTACTTTCCACACTCTGTCCTCCTCCTAGCTGAGGACCCTGGGGTGCCTGGGCAAGCCCTCTaGCAGCTGGCTGGTCCTCAC | + |
Preference number: 4 (lower is better) Translates to: ETVYFPHSVLLLAEDPGVPGQAL*QLAGPH Trigger: GTGAGGACCAGCCAGCTGCCAGAGGGCTTGCCCAGG...CACCCCAGGGTCCTCAGCTAGGAGGAGGACAGAGTGTGGAAAGTAGACAGTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CCA 90 bp | GTCTACTTTCCACACTCTGTCCTCCTCCTAGCTGAGGACCCTGGGGTGGTGAATAAGCCCTCTGGCAGCTaGCTGGTCCTCACAGGTGGC | + |
Preference number: 4 (lower is better) Translates to: VYFPHSVLLLAEDPGVVNKPSGS*LVLTGG Trigger: GCCACCTGTGAGGACCAGCCAGCTGCCAGAGGGCTT...ATTCACCACCCCAGGGTCCTCAGCTAGGAGGAGGACAGAGTGTGGAAAGTAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR GCA 90 bp | GTCTACTTTCCACACTCTGTCCTCCTCCTAGCTGAGGACCCTGGGGTGGTGAATTATTGGCGGCTGCTGTaGTCTTCCTGCCTAGGCCTG | + |
Preference number: 4 (lower is better) Translates to: VYFPHSVLLLAEDPGVVNYWRLL*SSCLGL Trigger: CAGGCCTAGGCAGGAAGAGCACAGCAGCCGCCAATA...ATTCACCACCCCAGGGTCCTCAGCTAGGAGGAGGACAGAGTGTGGAAAGTAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CCA 90 bp | GAAACTGTCTACTTTCCACACTCTGTCCTCCTCCTAGCTGAGGACCCTGGGGTGGTGTGGAACCACAGCTaGGCTGAAGTCACCTGGTGG | + |
Preference number: 4 (lower is better) Translates to: ETVYFPHSVLLLAEDPGVVWNHS*AEVTWW Trigger: CCACCAGGTGACTTCAGCCCAGCTGTGGTTCCACAC...CACCCCAGGGTCCTCAGCTAGGAGGAGGACAGAGTGTGGAAAGTAGACAGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CCA 90 bp | CCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAACCTCTGGCAGCTGGCTaGTCCTCACAGGTGGCACCT | + |
Preference number: 4 (lower is better) Translates to: PGWSRIWIPHTERCREKEPLAAG*SSQVAP Trigger: AGGTGCCACCTGTGAGGACCAGCCAGCTGCCAGAGG...TTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CCA 90 bp | CTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAAGGGGGCGCAGAGCTATTaGCGGCTGCTGTGCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: LGGAGYGSLILKDVGKRKGAQSY*RLLCSS Trigger: GGAAGAGCACAGCAGCCGCCAATAGCTCTGCGCCCC...CTTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CCA 90 bp | TTGTTATCCACAGGACCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGAGCAGCAACACCAGGATaGGGTGGGTCAGCAGAGGGA | + |
Preference number: 4 (lower is better) Translates to: LLSTGPGWSRIWIPHTERAATPG*GGSAEG Trigger: TCCCTCTGCTGACCCACCCCATCCTGGTGTTGCTGC...TCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGGTCCTGTGGATAACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CCA 90 bp | GGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAAGTGGGGGCAGGTCAGATGTaGGCATCCCGCAGCTACCAT | + |
Preference number: 4 (lower is better) Translates to: GWSRIWIPHTERCREKEVGAGQM*ASRSYH Trigger: ATGGTAGCTGCGGGATGCCCACATCTGACCTGCCCC...CACTTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR TCA 90 bp | CCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAACAGAGGTCCTGTGCATaGAACCCCCAACGGCATGTC | + |
Preference number: 4 (lower is better) Translates to: PGWSRIWIPHTERCREKEQRSCA*NPQRHV Trigger: GACATGCCGTTGGGGGTTTCATGCACAGGACCTCTG...TTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR TCA 90 bp | AAAGATGTAGGGAAAAGGAAGTGGAAACTGTCTACTTTCCACACTCTGTCCTCCGAACCACAGCTGGGCTaGAGTCACCTGGTGGCTGCG | + |
Preference number: 4 (lower is better) Translates to: KDVGKRKWKLSTFHTLSSEPQLG*SHLVAA Trigger: CGCAGCCACCAGGTGACTTCAGCCCAGCTGTGGTTC...GGAGGACAGAGTGTGGAAAGTAGACAGTTTCCACTTCCTTTTCCCTACATCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CCA 90 bp | CCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAACTGCCTAGGCCTGTGTaGAACCACAGCTGGGCTGAA | + |
Preference number: 4 (lower is better) Translates to: PGWSRIWIPHTERCREKELPRPV*NHSWAE Trigger: TTCAGCCCAGCTGTGGTTCCACACAGGCCTAGGCAG...TTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CCA 90 bp | GGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAAGTGCGAGCAGGAACAGAGTaGGCATCGCAGCAGCAACAC | + |
Preference number: 4 (lower is better) Translates to: GWSRIWIPHTERCREKEVRAGTE*ASQQQH Trigger: GTGTTGCTGCTGCGATGCCCACTCTGTTCCTGCTCG...CACTTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CCA 90 bp | CCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAATGGGCTGAAGTCACCTaGTGGCTGCGTATGTGTTGG | + |
Preference number: 4 (lower is better) Translates to: PGWSRIWIPHTERCREKEWAEVT*WLRMCW Trigger: CCAACACATACGCAGCCACCAGGTGACTTCAGCCCA...TTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CCA 90 bp | TATTGTTATCCACAGGACCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAACAGCACAGCAGGGCTTaGCCCCTGGCACCAAAAACA | + |
Preference number: 4 (lower is better) Translates to: YCYPQDLGGAGYGSLILKQHSRA*PLAPKT Trigger: TGTTTTTGGTGCCAGGGGCCAAGCCCTGCTGTGCTG...TTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGGTCCTGTGGATAACAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR TCA 90 bp | CTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAAGGCCGGAATACATAAGTaGAGAGGCCTTCCTCAGCCT | + |
Preference number: 4 (lower is better) Translates to: LGGAGYGSLILKDVGKRKAGIHK*RGLPQP Trigger: AGGCTGAGGAAGGCCTCTTCACTTATGTATTCCGGC...CTTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CCA 90 bp | AAGGAAGTGGAAACTGTCTACTTTCCACACTCTGTCCTCCTCCTAGCTGAGGACGGGAAAAGGATAGCCTaGGAGACATCTTCCTCCTCT | + |
Preference number: 4 (lower is better) Translates to: KEVETVYFPHSVLLLAEDGKRIA*ETSSSS Trigger: AGAGGAGGAAGATGTCTCCCAGGCTATCCTTTTCCC...GTCCTCAGCTAGGAGGAGGACAGAGTGTGGAAAGTAGACAGTTTCCACTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CCA 90 bp | CCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAATCCCAGCCCAGCTCTTaGAAGGAGATATTGAGAGCA | + |
Preference number: 4 (lower is better) Translates to: PGWSRIWIPHTERCREKESQPSS*KEILRA Trigger: TGCTCTCAATATCTCCTTCCAAGAGCTGGGCTGGGA...TTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CCA 90 bp | TATTGTTATCCACAGGACCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGACATCTTCCTCCTCTaGTTCAGAGGTCCTGTGCAT | + |
Preference number: 4 (lower is better) Translates to: YCYPQDLGGAGYGSLILKDIFLL*FRGPVH Trigger: ATGCACAGGACCTCTGAACCAGAGGAGGAAGATGTC...TTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGGTCCTGTGGATAACAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR TCA 90 bp | AAAGATGTAGGGAAAAGGAAGTGGAAACTGTCTACTTTCCACACTCTGTCCTCCCTTGGAAGGAGATATTaGGAGCAGCTCGATGGCAGA | + |
Preference number: 4 (lower is better) Translates to: KDVGKRKWKLSTFHTLSSLGRRY*EQLDGR Trigger: TCTGCCATCGAGCTGCTCTCAATATCTCCTTCCAAG...GGAGGACAGAGTGTGGAAAGTAGACAGTTTCCACTTCCTTTTCCCTACATCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR TCA 90 bp | CTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAAGGTACCATCTCATACTTaGAAGAGTAACCTCCATCTG | + |
Preference number: 4 (lower is better) Translates to: LGGAGYGSLILKDVGKRKVPSHT*KSNLHL Trigger: CAGATGGAGGTTACTCTTTCAAGTATGAGATGGTAC...CTTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR TCA 90 bp | TTGTTATCCACAGGACCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGAATACAAGCACAGTGTTaGGTAATAAGGTTGGGTACC | + |
Preference number: 4 (lower is better) Translates to: LLSTGPGWSRIWIPHTERIQAQC*VIRLGT Trigger: GGTACCCAACCTTATTACTCAACACTGTGCTTGTAT...TCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGGTCCTGTGGATAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CCA 90 bp | GAACGCCGGGCCCTCTCCCCCGCACTGGGTGCTCGAGCCCTAGTGTaGGCTACCAGGAAAGGAGTGGTCTCAGGCCGGCCCGAGCAGGAA | + |
Preference number: 5 (lower is better) Translates to: ERRALSPALGARALV*ATRKGVVSGRPEQE Trigger: TTCCTGCTCGGGCCGGCCTGAGACCACTCCTTTCCTGGTAGCCCACACTAGGGCTCGAGCACCCAGTGCGGGGGAGAGGGCCCGGCGTTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS TCA 90 bp | CAAGCGCAAAGCCGCAGGAGACCAAGGCCAAGGCACGGAGGGAGTTaGACGCCGGGCCCTCTCCCCCGCACTGGGTGCTCGAGCCCTAGT | + |
Preference number: 5 (lower is better) Translates to: QAQSRRRPRPRHGGS*TPGPLPRTGCSSPS Trigger: ACTAGGGCTCGAGCACCCAGTGCGGGGGAGAGGGCCCGGCGTTCAACTCCCTCCGTGCCTTGGCCTTGGTCTCCTGCGGCTTTGCGCTTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS GCA 90 bp | ACCAGGATGGGGTGGGTCAGCAGAGGGAAAGCAGACGCCGCCAGGTaGAGTACAGCCCAGCGTGGCGGGCCCTGTCCCAAGGACACAGGC | + |
Preference number: 5 (lower is better) Translates to: TRMGWVSRGKADAAR*STAQRGGPCPKDTG Trigger: GCCTGTGTCCTTGGGACAGGGCCCGCCACGCTGGGCTGTACTGCACCTGGCGGCGTCTGCTTTCCCTCTGCTGACCCACCCCATCCTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CCA 90 bp | GCGGCTGCTGTGCTCTTCCTGCCTAGGCCTGTGTGGAACCACAGCTaGGCTGAAGTCACCTGGTGGCTGCGTATGTGTTGGGATGGCCGG | + |
Preference number: 5 (lower is better) Translates to: AAAVLFLPRPVWNHS*AEVTWWLRMCWDGR Trigger: CCGGCCATCCCAACACATACGCAGCCACCAGGTGACTTCAGCCCAGCTGTGGTTCCACACAGGCCTAGGCAGGAAGAGCACAGCAGCCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CCA 90 bp | CGGTCCCAGCCCAGCTCTTGGAAGGAGATATTGAGAGCAGCTCGATaGCAGAAGGCATGCGCAGCGGGTTCCTCGGGAGGCCTCTGCAGC | + |
Preference number: 5 (lower is better) Translates to: RSQPSSWKEILRAAR*QKACAAGSSGGLCS Trigger: GCTGCAGAGGCCTCCCGAGGAACCCGCTGCGCATGCCTTCTGCCATCGAGCTGCTCTCAATATCTCCTTCCAAGAGCTGGGCTGGGACCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CCA 90 bp | GCCTTCACCTTGGCCAGGACGAGCTCCCGGACAAGTTCGGGTCCCTaGCAGCTGTCCACATCCCGTAGGGTCAACAGCAAAAGGAGCAGC | + |
Preference number: 5 (lower is better) Translates to: AFTLARTSSRTSSGP*QLSTSRRVNSKRSS Trigger: GCTGCTCCTTTTGCTGTTGACCCTACGGGATGTGGACAGCTGCCAGGGACCCGAACTTGTCCGGGAGCTCGTCCTGGCCAAGGTGAAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CCA 90 bp | CCATTGCTGGGGGCCCCAAGGCATCTAGGAATAGAGCCTTCACCTTaGCCAGGACGAGCTCCCGGACAAGTTCGGGTCCCTGGCAGCTGT | + |
Preference number: 5 (lower is better) Translates to: PLLGAPRHLGIEPSP*PGRAPGQVRVPGSC Trigger: ACAGCTGCCAGGGACCCGAACTTGTCCGGGAGCTCGTCCTGGCCAAGGTGAAGGCTCTATTCCTAGATGCCTTGGGGCCCCCAGCAATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CCA 90 bp | AAGAGGCCTTCCTCAGCCTCCTGGGCAAGCCCTCTGGCAGCTGGCTaGTCCTCACAGGTGGCACCTGTAGCTGGGAAAAGGATAGCCTGG | + |
Preference number: 5 (lower is better) Translates to: KRPSSASWASPLAAG*SSQVAPVAGKRIAW Trigger: CCAGGCTATCCTTTTCCCAGCTACAGGTGCCACCTGTGAGGACCAGCCAGCTGCCAGAGGGCTTGCCCAGGAGGCTGAGGAAGGCCTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS TCA 90 bp | GGTGTACGATCCAGCGGTCCCAGCCCAGCTCTTGGAAGGAGATATTaGGAGCAGCTCGATGGCAGAAGGCATGCGCAGCGGGTTCCTCGG | + |
Preference number: 5 (lower is better) Translates to: GVRSSGPSPALGRRY*EQLDGRRHAQRVPR Trigger: CCGAGGAACCCGCTGCGCATGCCTTCTGCCATCGAGCTGCTCTCAATATCTCCTTCCAAGAGCTGGGCTGGGACCGCTGGATCGTACACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS GCA 90 bp | GCACCAGAAGATCTAGCAGGGGCGCAGAGCTATTGGCGGCTGCTGTaGTCTTCCTGCCTAGGCCTGTGTGGAACCACAGCTGGGCTGAAG | + |
Preference number: 5 (lower is better) Translates to: APEDLAGAQSYWRLL*SSCLGLCGTTAGLK Trigger: CTTCAGCCCAGCTGTGGTTCCACACAGGCCTAGGCAGGAAGAGCACAGCAGCCGCCAATAGCTCTGCGCCCCTGCTAGATCTTCTGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS GCA 90 bp | AGCTCTTGGAAGGAGATATTGAGAGCAGCTCGATGGCAGAAGGCATaGGCAGCGGGTTCCTCGGGAGGCCTCTGCAGCAAGCGCAAAGCC | + |
Preference number: 5 (lower is better) Translates to: SSWKEILRAARWQKA*AAGSSGGLCSKRKA Trigger: GGCTTTGCGCTTGCTGCAGAGGCCTCCCGAGGAACCCGCTGCGCATGCCTTCTGCCATCGAGCTGCTCTCAATATCTCCTTCCAAGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CCA 90 bp | GCAGAGCTATTGGCGGCTGCTGTGCTCTTCCTGCCTAGGCCTGTGTaGAACCACAGCTGGGCTGAAGTCACCTGGTGGCTGCGTATGTGT | + |
Preference number: 5 (lower is better) Translates to: AELLAAAVLFLPRPV*NHSWAEVTWWLRMC Trigger: ACACATACGCAGCCACCAGGTGACTTCAGCCCAGCTGTGGTTCCACACAGGCCTAGGCAGGAAGAGCACAGCAGCCGCCAATAGCTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS TCA 90 bp | TCACCTGGTGGCTGCGTATGTGTTGGGATGGCCGGAATACATAAGTaGAGAGGCCTTCCTCAGCCTCCTGGGCAAGCCCTCTGGCAGCTG | + |
Preference number: 5 (lower is better) Translates to: SPGGCVCVGMAGIHK*RGLPQPPGQALWQL Trigger: CAGCTGCCAGAGGGCTTGCCCAGGAGGCTGAGGAAGGCCTCTTCACTTATGTATTCCGGCCATCCCAACACATACGCAGCCACCAGGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CCA 90 bp | CCCCAGATGATAGCACCAGAAGATCTAGCAGGGGCGCAGAGCTATTaGCGGCTGCTGTGCTCTTCCTGCCTAGGCCTGTGTGGAACCACA | + |
Preference number: 5 (lower is better) Translates to: PQMIAPEDLAGAQSY*RLLCSSCLGLCGTT Trigger: TGTGGTTCCACACAGGCCTAGGCAGGAAGAGCACAGCAGCCGCCAATAGCTCTGCGCCCCTGCTAGATCTTCTGGTGCTATCATCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CCA 90 bp | ATGAAACTGGGAGGGTGTACGATCCAGCGGTCCCAGCCCAGCTCTTaGAAGGAGATATTGAGAGCAGCTCGATGGCAGAAGGCATGCGCA | + |
Preference number: 5 (lower is better) Translates to: MKLGGCTIQRSQPSS*KEILRAARWQKACA Trigger: TGCGCATGCCTTCTGCCATCGAGCTGCTCTCAATATCTCCTTCCAAGAGCTGGGCTGGGACCGCTGGATCGTACACCCTCCCAGTTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CCA 90 bp | GGCTGGTCCTCACAGGTGGCACCTGTAGCTGGGAAAAGGATAGCCTaGGAGACATCTTCCTCCTCTGGTTCAGAGGTCCTGTGCATGAAA | + |
Preference number: 5 (lower is better) Translates to: GWSSQVAPVAGKRIA*ETSSSSGSEVLCMK Trigger: TTTCATGCACAGGACCTCTGAACCAGAGGAGGAAGATGTCTCCCAGGCTATCCTTTTCCCAGCTACAGGTGCCACCTGTGAGGACCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS GCA 90 bp | AGGATAGCCTGGGAGACATCTTCCTCCTCTGGTTCAGAGGTCCTGTaGATGAAACCCCCAACGGCATGTCTTCGAGGCAGACGCCTTATT | + |
Preference number: 5 (lower is better) Translates to: RIAWETSSSSGSEVL*MKPPTACLRGRRLI Trigger: AATAAGGCGTCTGCCTCGAAGACATGCCGTTGGGGGTTTCATGCACAGGACCTCTGAACCAGAGGAGGAAGATGTCTCCCAGGCTATCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CCA 90 bp | ACCTGTAGCTGGGAAAAGGATAGCCTGGGAGACATCTTCCTCCTCTaGTTCAGAGGTCCTGTGCATGAAACCCCCAACGGCATGTCTTCG | + |
Preference number: 5 (lower is better) Translates to: TCSWEKDSLGDIFLL*FRGPVHETPNGMSS Trigger: CGAAGACATGCCGTTGGGGGTTTCATGCACAGGACCTCTGAACCAGAGGAGGAAGATGTCTCCCAGGCTATCCTTTTCCCAGCTACAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CAA 90 bp | CCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAAAGGGGCGCAGAGCTATaGGCGGCTGCTGTGCTCTTC | + |
Preference number: 5 (lower is better) Translates to: PGWSRIWIPHTERCREKERGAEL*AAAVLF Trigger: GAAGAGCACAGCAGCCGCCAATAGCTCTGCGCCCCT...TTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CAA 90 bp | GGGTGGAGCAGGATATGGATCCCTCATACTGAAAGATGTAGGGAAAAGGAAGTGGCAGCACAGCAGGGCTaGGCCCCTGGCACCAAAAAC | + |
Preference number: 5 (lower is better) Translates to: GWSRIWIPHTERCREKEVAAQQG*APGTKN Trigger: GTTTTTGGTGCCAGGGGCCAAGCCCTGCTGTGCTGC...CACTTCCTTTTCCCTACATCTTTCAGTATGAGGGATCCATATCCTGCTCCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CAA 90 bp | AAAGATGTAGGGAAAAGGAAGTGGAAACTGTCTACTTTCCACACTCTGTCCTCCAATAGAGCCTTCACCTaGGCCAGGACGAGCTCCCGG | + |
Preference number: 5 (lower is better) Translates to: KDVGKRKWKLSTFHTLSSNRAFT*ARTSSR Trigger: CCGGGAGCTCGTCCTGGCCAAGGTGAAGGCTCTATT...GGAGGACAGAGTGTGGAAAGTAGACAGTTTCCACTTCCTTTTCCCTACATCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CAA 90 bp | AAAGATGTAGGGAAAAGGAAGTGGAAACTGTCTACTTTCCACACTCTGTCCTCCGTCCCAGCCCAGCTCTaGGAAGGAGATATTGAGAGC | + |
Preference number: 5 (lower is better) Translates to: KDVGKRKWKLSTFHTLSSVPAQL*EGDIES Trigger: GCTCTCAATATCTCCTTCCAAGAGCTGGGCTGGGAC...GGAGGACAGAGTGTGGAAAGTAGACAGTTTCCACTTCCTTTTCCCTACATCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS-3UTR CAA 90 bp | TTGTTATCCACAGGACCTGGGTGGAGCAGGATATGGATCCCTCATACTGAAAGAGATACAAGCACAGTGTaGAGTAATAAGGTTGGGTAC | + |
Preference number: 5 (lower is better) Translates to: LLSTGPGWSRIWIPHTERDTSTV*SNKVGY Trigger: GTACCCAACCTTATTACTCAACACTGTGCTTGTATC...TCTTTCAGTATGAGGGATCCATATCCTGCTCCACCCAGGTCCTGTGGATAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS TCA 72 bp | AGCCGCAGGAGACCAAGGCCAAGGCACGGAGGGAGTTaGACGCCGGGCCCTCTCCCCCGCACTGGGTGCTCG | + |
Preference number: 6 (lower is better) Translates to: SRRRPRPRHGGS*TPGPLPRTGCS Trigger: CGAGCACCCAGTGCGGGGGAGAGGGCCCGGCGTTCAACTCCCTCCGTGCCTTGGCCTTGGTCTCCTGCGGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS GCA 72 bp | GGGTGGGTCAGCAGAGGGAAAGCAGACGCCGCCAGGTaGAGTACAGCCCAGCGTGGCGGGCCCTGTCCCAAG | + |
Preference number: 6 (lower is better) Translates to: GWVSRGKADAAR*STAQRGGPCPK Trigger: CTTGGGACAGGGCCCGCCACGCTGGGCTGTACTGCACCTGGCGGCGTCTGCTTTCCCTCTGCTGACCCACCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CAA 72 bp | AAGCCGCAGGAGACCAAGGCCAAGGCACGGAGGGAGTaGAACGCCGGGCCCTCTCCCCCGCACTGGGTGCTC | + |
Preference number: 6 (lower is better) Translates to: KPQETKAKARRE*NAGPSPPHWVL Trigger: GAGCACCCAGTGCGGGGGAGAGGGCCCGGCGTTCAACTCCCTCCGTGCCTTGGCCTTGGTCTCCTGCGGCTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CCA 72 bp | GAAAGCAGACGCCGCCAGGTGCAGTACAGCCCAGCGTaGCGGGCCCTGTCCCAAGGACACAGGCACAGCCAT | + |
Preference number: 6 (lower is better) Translates to: ESRRRQVQYSPA*RALSQGHRHSH Trigger: ATGGCTGTGCCTGTGTCCTTGGGACAGGGCCCGCCACGCTGGGCTGTACTGCACCTGGCGGCGTCTGCTTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS GCA 72 bp | CAGAAGGCATGCGCAGCGGGTTCCTCGGGAGGCCTCTaGAGCAAGCGCAAAGCCGCAGGAGACCAAGGCCAA | + |
Preference number: 6 (lower is better) Translates to: QKACAAGSSGGL*SKRKAAGDQGQ Trigger: TTGGCCTTGGTCTCCTGCGGCTTTGCGCTTGCTGCAGAGGCCTCCCGAGGAACCCGCTGCGCATGCCTTCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS GCA 72 bp | CTCCATCTGAGGTGGTTCGGACGCGTAGGGACCTCATaGTCCCCGGAAGAGCAGCACAGCAGGGCTTGGCCC | + |
Preference number: 6 (lower is better) Translates to: LHLRWFGRVGTS*SPEEQHSRAWP Trigger: GGGCCAAGCCCTGCTGTGCTGCTCTTCCGGGGAGCATGAGGTCCCTACGCGTCCGAACCACCTCAGATGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CAA 90 bp | TCCATTGCTGGGGGCCCCAAGGCATCTAGGAATAGAGCCTTCACCTaGGCCAGGACGAGCTCCCGGACAAGTTCGGGTCCCTGGCAGCTG | + |
Preference number: 6 (lower is better) Translates to: SIAGGPKASRNRAFT*ARTSSRTSSGPWQL Trigger: CAGCTGCCAGGGACCCGAACTTGTCCGGGAGCTCGTCCTGGCCAAGGTGAAGGCTCTATTCCTAGATGCCTTGGGGCCCCCAGCAATGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CCA 72 bp | GGGGCCCCAAGGCATCTAGGAATAGAGCCTTCACCTTaGCCAGGACGAGCTCCCGGACAAGTTCGGGTCCCT | + |
Preference number: 6 (lower is better) Translates to: GAPRHLGIEPSP*PGRAPGQVRVP Trigger: AGGGACCCGAACTTGTCCGGGAGCTCGTCCTGGCCAAGGTGAAGGCTCTATTCCTAGATGCCTTGGGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CAA 90 bp | GGGTGTACGATCCAGCGGTCCCAGCCCAGCTCTTGGAAGGAGATATaGAGAGCAGCTCGATGGCAGAAGGCATGCGCAGCGGGTTCCTCG | + |
Preference number: 6 (lower is better) Translates to: GCTIQRSQPSSWKEI*RAARWQKACAAGSS Trigger: CGAGGAACCCGCTGCGCATGCCTTCTGCCATCGAGCTGCTCTCAATATCTCCTTCCAAGAGCTGGGCTGGGACCGCTGGATCGTACACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS TCA 72 bp | TCCAGCGGTCCCAGCCCAGCTCTTGGAAGGAGATATTaGGAGCAGCTCGATGGCAGAAGGCATGCGCAGCGG | + |
Preference number: 6 (lower is better) Translates to: SSGPSPALGRRY*EQLDGRRHAQR Trigger: CCGCTGCGCATGCCTTCTGCCATCGAGCTGCTCTCAATATCTCCTTCCAAGAGCTGGGCTGGGACCGCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS GCA 72 bp | GATCTAGCAGGGGCGCAGAGCTATTGGCGGCTGCTGTaGTCTTCCTGCCTAGGCCTGTGTGGAACCACAGCT | + |
Preference number: 6 (lower is better) Translates to: DLAGAQSYWRLL*SSCLGLCGTTA Trigger: AGCTGTGGTTCCACACAGGCCTAGGCAGGAAGAGCACAGCAGCCGCCAATAGCTCTGCGCCCCTGCTAGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CCA 72 bp | CCCAGCTCTTGGAAGGAGATATTGAGAGCAGCTCGATaGCAGAAGGCATGCGCAGCGGGTTCCTCGGGAGGC | + |
Preference number: 6 (lower is better) Translates to: PSSWKEILRAAR*QKACAAGSSGG Trigger: GCCTCCCGAGGAACCCGCTGCGCATGCCTTCTGCCATCGAGCTGCTCTCAATATCTCCTTCCAAGAGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CAA 90 bp | CCCCCAGATGATAGCACCAGAAGATCTAGCAGGGGCGCAGAGCTATaGGCGGCTGCTGTGCTCTTCCTGCCTAGGCCTGTGTGGAACCAC | + |
Preference number: 6 (lower is better) Translates to: PPDDSTRRSSRGAEL*AAAVLFLPRPVWNH Trigger: GTGGTTCCACACAGGCCTAGGCAGGAAGAGCACAGCAGCCGCCAATAGCTCTGCGCCCCTGCTAGATCTTCTGGTGCTATCATCTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS GCA 72 bp | AAGGAGATATTGAGAGCAGCTCGATGGCAGAAGGCATaGGCAGCGGGTTCCTCGGGAGGCCTCTGCAGCAAG | + |
Preference number: 6 (lower is better) Translates to: KEILRAARWQKA*AAGSSGGLCSK Trigger: CTTGCTGCAGAGGCCTCCCGAGGAACCCGCTGCGCATGCCTTCTGCCATCGAGCTGCTCTCAATATCTCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CCA 72 bp | GTGCTCTTCCTGCCTAGGCCTGTGTGGAACCACAGCTaGGCTGAAGTCACCTGGTGGCTGCGTATGTGTTGG | + |
Preference number: 6 (lower is better) Translates to: VLFLPRPVWNHS*AEVTWWLRMCW Trigger: CCAACACATACGCAGCCACCAGGTGACTTCAGCCCAGCTGTGGTTCCACACAGGCCTAGGCAGGAAGAGCAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CAA 72 bp | GATAGCACCAGAAGATCTAGCAGGGGCGCAGAGCTATaGGCGGCTGCTGTGCTCTTCCTGCCTAGGCCTGTG | + |
Preference number: 6 (lower is better) Translates to: DSTRRSSRGAEL*AAAVLFLPRPV Trigger: CACAGGCCTAGGCAGGAAGAGCACAGCAGCCGCCAATAGCTCTGCGCCCCTGCTAGATCTTCTGGTGCTATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CAA 90 bp | GATGAAACTGGGAGGGTGTACGATCCAGCGGTCCCAGCCCAGCTCTaGGAAGGAGATATTGAGAGCAGCTCGATGGCAGAAGGCATGCGC | + |
Preference number: 6 (lower is better) Translates to: DETGRVYDPAVPAQL*EGDIESSSMAEGMR Trigger: GCGCATGCCTTCTGCCATCGAGCTGCTCTCAATATCTCCTTCCAAGAGCTGGGCTGGGACCGCTGGATCGTACACCCTCCCAGTTTCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CCA 72 bp | ATAGCACCAGAAGATCTAGCAGGGGCGCAGAGCTATTaGCGGCTGCTGTGCTCTTCCTGCCTAGGCCTGTGT | + |
Preference number: 6 (lower is better) Translates to: IAPEDLAGAQSY*RLLCSSCLGLC Trigger: ACACAGGCCTAGGCAGGAAGAGCACAGCAGCCGCCAATAGCTCTGCGCCCCTGCTAGATCTTCTGGTGCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS GCA 72 bp | TGGGAGACATCTTCCTCCTCTGGTTCAGAGGTCCTGTaGATGAAACCCCCAACGGCATGTCTTCGAGGCAGA | + |
Preference number: 6 (lower is better) Translates to: WETSSSSGSEVL*MKPPTACLRGR Trigger: TCTGCCTCGAAGACATGCCGTTGGGGGTTTCATGCACAGGACCTCTGAACCAGAGGAGGAAGATGTCTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |
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CDS CCA 72 bp | TGGGAAAAGGATAGCCTGGGAGACATCTTCCTCCTCTaGTTCAGAGGTCCTGTGCATGAAACCCCCAACGGC | + |
Preference number: 6 (lower is better) Translates to: WEKDSLGDIFLL*FRGPVHETPNG Trigger: GCCGTTGGGGGTTTCATGCACAGGACCTCTGAACCAGAGGAGGAAGATGTCTCCCAGGCTATCCTTTTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037330.5 |