Pregenerated sensors for ING4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030330Ensembl transcript IDs: ENSMUST00000032480.14, ENSMUST00000112417.9, ENSMUST00000140131.8
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGGAGGAGAGCACATACCGTCACTGGCTGCAGCACCCTCCCTACTaGGGTTTGGATGCAGCCTCAGCACCGAGTGGGGAGGAGGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: REESTYRHWLQHPPY*GLDAASAPSGEEGE Trigger: CTCTCCCTCCTCCCCACTCGGTGCTGAGGCTGCATCCAAACCCCAGTAGGGAGGGTGCTGCAGCCAGTGACGGTATGTGCTCTCCTCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| 3UTR GCA 90 bp | CTTCCCTCTGGGAGAGGCGGGAGGAGAGCACATACCGTCACTGGCTaGAGCACCCTCCCTACTGGGGTTTGGATGCAGCCTCAGCACCGA | + |
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Preference number: 1 (lower is better) Translates to: LPSGRGGRRAHTVTG*STLPTGVWMQPQHR Trigger: TCGGTGCTGAGGCTGCATCCAAACCCCAGTAGGGAGGGTGCTGCAGCCAGTGACGGTATGTGCTCTCCTCCCGCCTCTCCCAGAGGGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| 3UTR CCA 90 bp | GCAGCACCCTCCCTACTGGGGTTTGGATGCAGCCTCAGCACCGAGTaGGGAGGAGGGAGAGGGATGACGGTACCGCACTGTCCACATCTC | + |
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Preference number: 1 (lower is better) Translates to: AAPSLLGFGCSLSTE*GGGRGMTVPHCPHL Trigger: GAGATGTGGACAGTGCGGTACCGTCATCCCTCTCCCTCCTCCCCACTCGGTGCTGAGGCTGCATCCAAACCCCAGTAGGGAGGGTGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| 3UTR GCA 90 bp | CACATACCGTCACTGGCTGCAGCACCCTCCCTACTGGGGTTTGGATaGAGCCTCAGCACCGAGTGGGGAGGAGGGAGAGGGATGACGGTA | + |
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Preference number: 1 (lower is better) Translates to: HIPSLAAAPSLLGFG*SLSTEWGGGRGMTV Trigger: TACCGTCATCCCTCTCCCTCCTCCCCACTCGGTGCTGAGGCTGCATCCAAACCCCAGTAGGGAGGGTGCTGCAGCCAGTGACGGTATGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| 3UTR CCA 90 bp | ATTACTTCCCTCTGGGAGAGGCGGGAGGAGAGCACATACCGTCACTaGCTGCAGCACCCTCCCTACTGGGGTTTGGATGCAGCCTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: ITSLWERREESTYRH*LQHPPYWGLDAASA Trigger: TGCTGAGGCTGCATCCAAACCCCAGTAGGGAGGGTGCTGCAGCCAGTGACGGTATGTGCTCTCCTCCCGCCTCTCCCAGAGGGAAGTAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| 3UTR CCA 90 bp | CCTCACCAAGGAGGCAAAAGGACAGTGAGTGAGATTACTTCCCTCTaGGAGAGGCGGGAGGAGAGCACATACCGTCACTGGCTGCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: PHQGGKRTVSEITSL*ERREESTYRHWLQH Trigger: GTGCTGCAGCCAGTGACGGTATGTGCTCTCCTCCCGCCTCTCCCAGAGGGAAGTAATCTCACTCACTGTCCTTTTGCCTCCTTGGTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| 3UTR CCA 90 bp | ACCACAGGACAGGACCATTTTGGGTTTTATGTCTTGTCCTATTTCTaGCAAGCCATCTTCCTGCCTCTCATCCAATCCAGAGGATGCGAA | + |
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Preference number: 1 (lower is better) Translates to: TTGQDHFGFYVLSYF*QAIFLPLIQSRGCE Trigger: TTCGCATCCTCTGGATTGGATGAGAGGCAGGAAGATGGCTTGCCAGAAATAGGACAAGACATAAAACCCAAAATGGTCCTGTCCTGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
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| 3UTR CCA 90 bp | AAGTCTGTAATGGAATCCAGGGAAACCTATTTCTTCTTCCGTTCTTaGGAGCAGCGTGGGCAAAACCATTTCCCTCGAGGTTTGGTTGTC | + |
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Preference number: 1 (lower is better) Translates to: KSVMESRETYFFFRS*EQRGQNHFPRGLVV Trigger: GACAACCAAACCTCGAGGGAAATGGTTTTGCCCACGCTGCTCCCAAGAACGGAAGAAGAAATAGGTTTCCCTGGATTCCATTACAGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112417.9 |
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| 3UTR GCA 90 bp | TATTTCTGGCAAGCCATCTTCCTGCCTCTCATCCAATCCAGAGGATaGGAAAAGAATGCTTACCACATATACTTAAACAGTCTCTACAAT | + |
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Preference number: 1 (lower is better) Translates to: YFWQAIFLPLIQSRG*EKNAYHIYLNSLYN Trigger: ATTGTAGAGACTGTTTAAGTATATGTGGTAAGCATTCTTTTCGCATCCTCTGGATTGGATGAGAGGCAGGAAGATGGCTTGCCAGAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
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| 3UTR-3UTR TCA 90 bp | GTCACTGGCTGCAGCACCCTCCCTACTGGGGTTTGGATGCAGCCTCAGCACCGAGAGGAGGGAGAGGGATaGCGGTACCGCACTGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: VTGCSTLPTGVWMQPQHREEGEG*RYRTVH Trigger: GTGGACAGTGCGGTACCGTCATCCCTCTCCCTCCTC...TCGGTGCTGAGGCTGCATCCAAACCCCAGTAGGGAGGGTGCTGCAGCCAGTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| 3UTR-3UTR GCA 90 bp | AGACCCCTCCCCATGGAGAACAGGAAGAGTGCAGAGAAGGCAGTCTGTCCTGCCAGGGGACTGGGAAAGTaGCCCACTCCACTGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: RPLPMENRKSAEKAVCPARGLGK*PTPLPQ Trigger: CTGGGGCAGTGGAGTGGGGCACTTTCCCAGTCCCCT...GGCAGGACAGACTGCCTTCTCTGCACTCTTCCTGTTCTCCATGGGGAGGGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGAGCACATACCGTCACTGGCTGCAGCACCCTCCCTACTGGGGTTTGGATAGCACATACCGTCACTaGCTGCAGCACCCTCCCTAC | + |
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Preference number: 2 (lower is better) Translates to: EESTYRHWLQHPPYWGLDSTYRH*LQHPPY Trigger: GTAGGGAGGGTGCTGCAGCCAGTGACGGTATGTGCT...ATCCAAACCCCAGTAGGGAGGGTGCTGCAGCCAGTGACGGTATGTGCTCTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAGGCAGTCTGTCCTGCCTAGCTCCCAATGGGGGAAGGAGGAGTGAGGGGGAAGACCCCTCCCCATaGAGAACAGGAAGAGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: REGSLSCLAPNGGRRSEGEDPSP*RTGRVQ Trigger: CTGCACTCTTCCTGTTCTCCATGGGGAGGGGTCTTC...CCCCTCACTCCTCCTTCCCCCATTGGGAGCTAGGCAGGACAGACTGCCTTCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCCAGGTGGAGAAGCTGTGGACACCACAGGACAGGACCATTTTGGGTTTTGAGGAGGGAGAGGGATaGCGGTACCGCACTGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LLQVEKLWTPQDRTILGFEEGEG*RYRTVH Trigger: GTGGACAGTGCGGTACCGTCATCCCTCTCCCTCCTC...AAAACCCAAAATGGTCCTGTCCTGTGGTGTCCACAGCTTCTCCACCTGGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
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| 3UTR-3UTR CCA 90 bp | AGCACATACCGTCACTGGCTGCAGCACCCTCCCTACTGGGGTTTGGATGCAGCCTTCTTGGGAGCAGCGTaGGCAAAACCATTTCCCTCG | + |
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Preference number: 2 (lower is better) Translates to: STYRHWLQHPPYWGLDAAFLGAA*AKPFPS Trigger: CGAGGGAAATGGTTTTGCCCACGCTGCTCCCAAGAA...GGCTGCATCCAAACCCCAGTAGGGAGGGTGCTGCAGCCAGTGACGGTATGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112417.9 |
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| 3UTR-3UTR TCA 90 bp | TCCTATTTCTGGCAAGCCATCTTCCTGCCTCTCATCCAATCCAGAGGATGCGAAGAGGAGGGAGAGGGATaGCGGTACCGCACTGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SYFWQAIFLPLIQSRGCEEEGEG*RYRTVH Trigger: GTGGACAGTGCGGTACCGTCATCCCTCTCCCTCCTC...TTCGCATCCTCTGGATTGGATGAGAGGCAGGAAGATGGCTTGCCAGAAATAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
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| 3UTR-3UTR TCA 90 bp | CACCAAGGAGGCAAAAGGACAGTGAGTGAGATTACTTCCCTCTGGGAGAGGCGGAGAGGACCCTCCCTCTaGAATACAGCACCAACCTCA | + |
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Preference number: 2 (lower is better) Translates to: HQGGKRTVSEITSLWERRRGPSL*NTAPTS Trigger: TGAGGTTGGTGCTGTATTTCAGAGGGAGGGTCCTCT...CCGCCTCTCCCAGAGGGAAGTAATCTCACTCACTGTCCTTTTGCCTCCTTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| 3UTR-3UTR GCA 90 bp | ATTTACCTACCCCAACTCCTTTTACATGTGAGTAACCTGCGGTCTACCTTGCCCAGGGGACTGGGAAAGTaGCCCACTCCACTGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: IYLPQLLLHVSNLRSTLPRGLGK*PTPLPQ Trigger: CTGGGGCAGTGGAGTGGGGCACTTTCCCAGTCCCCT...GGGCAAGGTAGACCGCAGGTTACTCACATGTAAAAGGAGTTGGGGTAGGTAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAATGAAGAGGACCCTCCCTCTGAAATACAGCACCAACCTCACCAAGGAGGCATTTCCCTCGAGGTTTaGTTGTCAGCCCCACACAGG | + |
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Preference number: 2 (lower is better) Translates to: GNEEDPPSEIQHQPHQGGISLEV*LSAPHR Trigger: CCTGTGTGGGGCTGACAACCAAACCTCGAGGGAAAT...GCCTCCTTGGTGAGGTTGGTGCTGTATTTCAGAGGGAGGGTCCTCTTCATTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112417.9 |
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| 3UTR-3UTR CCA 90 bp | TGCAAGGCACTCCTCCAGGTGGAGAAGCTGTGGACACCACAGGACAGGACCATTTTCTTCTTCCGTTCTTaGGAGCAGCGTGGGCAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: CKALLQVEKLWTPQDRTIFFFRS*EQRGQN Trigger: GTTTTGCCCACGCTGCTCCCAAGAACGGAAGAAGAA...AATGGTCCTGTCCTGTGGTGTCCACAGCTTCTCCACCTGGAGGAGTGCCTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112417.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCCTATTTCTGGCAAGCCATCTTCCTGCCTCTCATCCAATCCAGAGGATGCGGAAGACCCCTCCCCATaGAGAACAGGAAGAGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: CPISGKPSSCLSSNPEDAEDPSP*RTGRVQ Trigger: CTGCACTCTTCCTGTTCTCCATGGGGAGGGGTCTTC...CGCATCCTCTGGATTGGATGAGAGGCAGGAAGATGGCTTGCCAGAAATAGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
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| 3UTR-3UTR GCA 90 bp | GTTTTATGTCTTGTCCTATTTCTGGCAAGCCATCTTCCTGCCTCTCATCCAATCAGGGGACTGGGAAAGTaGCCCACTCCACTGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VLCLVLFLASHLPASHPIRGLGK*PTPLPQ Trigger: CTGGGGCAGTGGAGTGGGGCACTTTCCCAGTCCCCT...GATTGGATGAGAGGCAGGAAGATGGCTTGCCAGAAATAGGACAAGACATAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
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| 3UTR CAA 90 bp | CTCCTCCAGGTGGAGAAGCTGTGGACACCACAGGACAGGACCATTTaGGGTTTTATGTCTTGTCCTATTTCTGGCAAGCCATCTTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: LLQVEKLWTPQDRTI*GFMSCPISGKPSSC Trigger: GCAGGAAGATGGCTTGCCAGAAATAGGACAAGACATAAAACCCAAAATGGTCCTGTCCTGTGGTGTCCACAGCTTCTCCACCTGGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
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| 3UTR-3UTR GCA 90 bp | CCTATTTCTGGCAAGCCATCTTCCTGCCTCTCATCCAATCCAGAGGATGCGAAAGGAGAACAGGAAGAGTaGAGAGAAGGCAGTCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: PISGKPSSCLSSNPEDAKGEQEE*REGSLS Trigger: GGACAGACTGCCTTCTCTGCACTCTTCCTGTTCTCC...TTTCGCATCCTCTGGATTGGATGAGAGGCAGGAAGATGGCTTGCCAGAAATAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
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| 3UTR CAA 90 bp | GAAGCTGTGGACACCACAGGACAGGACCATTTTGGGTTTTATGTCTaGTCCTATTTCTGGCAAGCCATCTTCCTGCCTCTCATCCAATCC | + |
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Preference number: 2 (lower is better) Translates to: EAVDTTGQDHFGFYV*SYFWQAIFLPLIQS Trigger: GGATTGGATGAGAGGCAGGAAGATGGCTTGCCAGAAATAGGACAAGACATAAAACCCAAAATGGTCCTGTCCTGTGGTGTCCACAGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
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| 3UTR CAA 90 bp | GAAGTCTGTAATGGAATCCAGGGAAACCTATTTCTTCTTCCGTTCTaGGGAGCAGCGTGGGCAAAACCATTTCCCTCGAGGTTTGGTTGT | + |
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Preference number: 2 (lower is better) Translates to: EVCNGIQGNLFLLPF*GAAWAKPFPSRFGC Trigger: ACAACCAAACCTCGAGGGAAATGGTTTTGCCCACGCTGCTCCCAAGAACGGAAGAAGAAATAGGTTTCCCTGGATTCCATTACAGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112417.9 |
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| 3UTR-3UTR GCA 90 bp | ACCACAGGACAGGACCATTTTGGGTTTTATGTCTTGTCCTATTTCTGGCAAGCCATCCAATCCAGAGGATaGGAAAAGAATGCTTACCAC | + |
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Preference number: 2 (lower is better) Translates to: TTGQDHFGFYVLSYFWQAIQSRG*EKNAYH Trigger: GTGGTAAGCATTCTTTTCGCATCCTCTGGATTGGAT...GGCTTGCCAGAAATAGGACAAGACATAAAACCCAAAATGGTCCTGTCCTGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
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| 3UTR-3UTR TCA 90 bp | ATATACTTAAACAGTCTCTACAATAAACACAGCAGGCTAGCATGGATAGCTTTTGAGGCAAAAGGACAGTaGGTGAGATTACTTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: IYLNSLYNKHSRLAWIAFEAKGQ*VRLLPS Trigger: AGAGGGAAGTAATCTCACTCACTGTCCTTTTGCCTC...AAAAGCTATCCATGCTAGCCTGCTGTGTTTATTGTAGAGACTGTTTAAGTATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
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| 3UTR GCA 72 bp | TCACTGGCTGCAGCACCCTCCCTACTGGGGTTTGGATaGAGCCTCAGCACCGAGTGGGGAGGAGGGAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: SLAAAPSLLGFG*SLSTEWGGGRG Trigger: CCCTCTCCCTCCTCCCCACTCGGTGCTGAGGCTGCATCCAAACCCCAGTAGGGAGGGTGCTGCAGCCAGTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| 3UTR GCA 72 bp | GGGAGAGGCGGGAGGAGAGCACATACCGTCACTGGCTaGAGCACCCTCCCTACTGGGGTTTGGATGCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: GRGGRRAHTVTG*STLPTGVWMQP Trigger: AGGCTGCATCCAAACCCCAGTAGGGAGGGTGCTGCAGCCAGTGACGGTATGTGCTCTCCTCCCGCCTCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| 3UTR CCA 72 bp | CTCTGGGAGAGGCGGGAGGAGAGCACATACCGTCACTaGCTGCAGCACCCTCCCTACTGGGGTTTGGATGCA | + |
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Preference number: 3 (lower is better) Translates to: LWERREESTYRH*LQHPPYWGLDA Trigger: TGCATCCAAACCCCAGTAGGGAGGGTGCTGCAGCCAGTGACGGTATGTGCTCTCCTCCCGCCTCTCCCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| 3UTR-3UTR CAA 90 bp | GTCACTGGCTGCAGCACCCTCCCTACTGGGGTTTGGATGCAGCCTCAGCACCGACATTTCCCTCGAGGTTaGGTTGTCAGCCCCACACAG | + |
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Preference number: 3 (lower is better) Translates to: VTGCSTLPTGVWMQPQHRHFPRG*VVSPTQ Trigger: CTGTGTGGGGCTGACAACCAAACCTCGAGGGAAATG...TCGGTGCTGAGGCTGCATCCAAACCCCAGTAGGGAGGGTGCTGCAGCCAGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112417.9 |
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| 3UTR GCA 72 bp | GGAGAACAGGAAGAGTGCAGAGAAGGCAGTCTGTCCTaGCTAGCTCCCAATGGGGGAAGGAGGAGTGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: GEQEECREGSLS*LAPNGGRRSEG Trigger: CCCCTCACTCCTCCTTCCCCCATTGGGAGCTAGGCAGGACAGACTGCCTTCTCTGCACTCTTCCTGTTCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| 3UTR TCA 72 bp | GCACCAACCTCACCAAGGAGGCAAAAGGACAGTGAGTaGGATTACTTCCCTCTGGGAGAGGCGGGAGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: APTSPRRQKDSE*DYFPLGEAGGE Trigger: CTCTCCTCCCGCCTCTCCCAGAGGGAAGTAATCTCACTCACTGTCCTTTTGCCTCCTTGGTGAGGTTGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| 3UTR CCA 72 bp | GGCCACTGCCCAAATGACCTAGAAGACCCCTCCCCATaGAGAACAGGAAGAGTGCAGAGAAGGCAGTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: GHCPNDLEDPSP*RTGRVQRRQSV Trigger: GACAGACTGCCTTCTCTGCACTCTTCCTGTTCTCCATGGGGAGGGGTCTTCTAGGTCATTTGGGCAGTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| 3UTR CCA 72 bp | AATTCTGAGTCCCCCGATGCAAGGCACTCCTCCAGGTaGAGAAGCTGTGGACACCACAGGACAGGACCATTT | + |
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Preference number: 3 (lower is better) Translates to: NSESPDARHSSR*RSCGHHRTGPF Trigger: AAATGGTCCTGTCCTGTGGTGTCCACAGCTTCTCCACCTGGAGGAGTGCCTTGCATCGGGGGACTCAGAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
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| 3UTR-3UTR CAA 90 bp | CCACTCTGTCCACTAGCCCAGGTCAGGGGGATGCAGAAGTCTGTAATGGAATCCTTTCTTCTTCCGTTCTaGGGAGCAGCGTGGGCAAAA | + |
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Preference number: 3 (lower is better) Translates to: PLCPLAQVRGMQKSVMESFLLPF*GAAWAK Trigger: TTTTGCCCACGCTGCTCCCAAGAACGGAAGAAGAAA...GGATTCCATTACAGACTTCTGCATCCCCCTGACCTGGGCTAGTGGACAGAGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112417.9 |
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| 3UTR CCA 72 bp | ATGGAATCCAGGGAAACCTATTTCTTCTTCCGTTCTTaGGAGCAGCGTGGGCAAAACCATTTCCCTCGAGGT | + |
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Preference number: 3 (lower is better) Translates to: MESRETYFFFRS*EQRGQNHFPRG Trigger: ACCTCGAGGGAAATGGTTTTGCCCACGCTGCTCCCAAGAACGGAAGAAGAAATAGGTTTCCCTGGATTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112417.9 |
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| 3UTR-3UTR CAA 90 bp | ATATACTTAAACAGTCTCTACAATAAACACAGCAGGCTAGCATGGATAGCTTTTTCCCTCGAGGTTTGGTaGTCAGCCCCACACAGGCGA | + |
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Preference number: 3 (lower is better) Translates to: IYLNSLYNKHSRLAWIAFSLEVW*SAPHRR Trigger: TCGCCTGTGTGGGGCTGACAACCAAACCTCGAGGGA...AAAAGCTATCCATGCTAGCCTGCTGTGTTTATTGTAGAGACTGTTTAAGTATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112417.9 |
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| 3UTR GCA 72 bp | TTTATGTCTTGTCCTATTTCTGGCAAGCCATCTTCCTaGCTCTCATCCAATCCAGAGGATGCGAAAAGAATG | + |
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Preference number: 3 (lower is better) Translates to: FMSCPISGKPSS*LSSNPEDAKRM Trigger: CATTCTTTTCGCATCCTCTGGATTGGATGAGAGGCAGGAAGATGGCTTGCCAGAAATAGGACAAGACATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
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| 3UTR GCA 72 bp | CAAGCCATCTTCCTGCCTCTCATCCAATCCAGAGGATaGGAAAAGAATGCTTACCACATATACTTAAACAGT | + |
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Preference number: 3 (lower is better) Translates to: QAIFLPLIQSRG*EKNAYHIYLNS Trigger: ACTGTTTAAGTATATGTGGTAAGCATTCTTTTCGCATCCTCTGGATTGGATGAGAGGCAGGAAGATGGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
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| CDS-3UTR CCA 90 bp | GCAGCACCCTCCCTACTGGGGTTTGGATGCAGCCTCAGCACCGAGTGGGGAGGAATTTCCCTCGAGGTTTaGTTGTCAGCCCCACACAGG | + |
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Preference number: 4 (lower is better) Translates to: AAPSLLGFGCSLSTEWGGISLEV*LSAPHR Trigger: CCTGTGTGGGGCTGACAACCAAACCTCGAGGGAAAT...TCCTCCCCACTCGGTGCTGAGGCTGCATCCAAACCCCAGTAGGGAGGGTGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000140131.8 |
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| CDS-3UTR GCA 90 bp | AGAGAAGGCAGTCTGTCCTGCCTAGCTCCCAATGGGGGAAGGAGGAGTGAGGGGCCTCGGAGCTCAGGCTaGGGGCGCTACTCATATATT | + |
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Preference number: 4 (lower is better) Translates to: REGSLSCLAPNGGRRSEGPRSSG*GRYSYI Trigger: AATATATGAGTAGCGCCCGCAGCCTGAGCTCCGAGG...CCCCTCACTCCTCCTTCCCCCATTGGGAGCTAGGCAGGACAGACTGCCTTCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| CDS-3UTR CCA 90 bp | CGAGTGGGGAGGAGGGAGAGGGATGACGGTACCGCACTGTCCACATCTCCCTGGGACAAAGGCAATATGTaGGTTCGTTGGGATCCACAG | + |
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Preference number: 4 (lower is better) Translates to: RVGRRERDDGTALSTSPWDKGNM*VRWDPQ Trigger: CTGTGGATCCCAACGAACCCACATATTGCCTTTGTC...CCAGGGAGATGTGGACAGTGCGGTACCGTCATCCCTCTCCCTCCTCCCCACTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000140131.8 |
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| CDS-3UTR CCA 90 bp | AGAGAAGGCAGTCTGTCCTGCCTAGCTCCCAATGGGGGAAGGAGGAGTGAGGGGTTCTTGGGAGCAGCGTaGGCAAAACCATTTCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: REGSLSCLAPNGGRRSEGFLGAA*AKPFPS Trigger: CGAGGGAAATGGTTTTGCCCACGCTGCTCCCAAGAA...CCCCTCACTCCTCCTTCCCCCATTGGGAGCTAGGCAGGACAGACTGCCTTCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000140131.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAAGGCAGTCTGTCCTGCCTAGCTCCCAATGGGGGAAGGAGGAGTGAGGGGGGGGGCTTCTTCATCTaGGTTTTTCCCTTTGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: REGSLSCLAPNGGRRSEGGGFFI*VFPFGT Trigger: CGTTCCAAAGGGAAAAACTCAGATGAAGAAGCCCCC...CCCCTCACTCCTCCTTCCCCCATTGGGAGCTAGGCAGGACAGACTGCCTTCTCT 57% GC, longest homopolymer 9 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
||
| CDS-3UTR TCA 90 bp | CAGCACAGGCCTTCCACTCTGTCCACTAGCCCAGGTCAGGGGGATGCAGAAGTCGGGGGCTTCTTCATCTaGGTTTTTCCCTTTGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: QHRPSTLSTSPGQGDAEVGGFFI*VFPFGT Trigger: CGTTCCAAAGGGAAAAACTCAGATGAAGAAGCCCCC...GACTTCTGCATCCCCCTGACCTGGGCTAGTGGACAGAGTGGAAGGCCTGTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
||
| CDS-3UTR TCA 90 bp | CGAGTGGGGAGGAGGGAGAGGGATGACGGTACCGCACTGTCCACATCTCCCTGGAGGTCCCTCATGAGCTaGAAGTTTCTCTGTAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVGRRERDDGTALSTSPWRSLMS*KFLCNS Trigger: TGAATTACAGAGAAACTTTCAGCTCATGAGGGACCT...CCAGGGAGATGTGGACAGTGCGGTACCGTCATCCCTCTCCCTCCTCCCCACTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
||
| CDS-3UTR GCA 90 bp | AGGACAGTGAGTGAGATTACTTCCCTCTGGGAGAGGCGGGAGGAGAGCACATACCCTCGGAGCTCAGGCTaGGGGCGCTACTCATATATT | + |
|
Preference number: 4 (lower is better) Translates to: RTVSEITSLWERREESTYPRSSG*GRYSYI Trigger: AATATATGAGTAGCGCCCGCAGCCTGAGCTCCGAGG...GTATGTGCTCTCCTCCCGCCTCTCCCAGAGGGAAGTAATCTCACTCACTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
||
| CDS-3UTR TCA 90 bp | GAAGACCCCTCCCCATGGAGAACAGGAAGAGTGCAGAGAAGGCAGTCTGTCCTGGGTCTAGGTCCCTCATaGGCTGAAAGTTTCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EDPSPWRTGRVQRRQSVLGLGPS*AESFSV Trigger: TACAGAGAAACTTTCAGCTCATGAGGGACCTAGACC...CAGGACAGACTGCCTTCTCTGCACTCTTCCTGTTCTCCATGGGGAGGGGTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
||
| CDS-3UTR CCA 90 bp | CACCAAGGAGGCAAAAGGACAGTGAGTGAGATTACTTCCCTCTGGGAGAGGCGGCTGAGTTTTTCCCTTTaGAACGGGCTCTGGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HQGGKRTVSEITSLWERRLSFSL*NGLWQL Trigger: AAGCTGCCAGAGCCCGTTCCAAAGGGAAAAACTCAG...CCGCCTCTCCCAGAGGGAAGTAATCTCACTCACTGTCCTTTTGCCTCCTTGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGAATGAAGAGGACCCTCCCTCTGAAATACAGCACCAACCTCACCAAGGAGTTCTTGGGAGCAGCGTaGGCAAAACCATTTCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RGMKRTLPLKYSTNLTKEFLGAA*AKPFPS Trigger: CGAGGGAAATGGTTTTGCCCACGCTGCTCCCAAGAA...CTCCTTGGTGAGGTTGGTGCTGTATTTCAGAGGGAGGGTCCTCTTCATTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000140131.8 |
||
| CDS-3UTR CCA 90 bp | GGGAATGAAGAGGACCCTCCCTCTGAAATACAGCACCAACCTCACCAAGGAGGCTTCTTCTTCCGTTCTTaGGAGCAGCGTGGGCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GNEEDPPSEIQHQPHQGGFFFRS*EQRGQN Trigger: GTTTTGCCCACGCTGCTCCCAAGAACGGAAGAAGAA...GCCTCCTTGGTGAGGTTGGTGCTGTATTTCAGAGGGAGGGTCCTCTTCATTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000140131.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTCCAGGTGGAGAAGCTGTGGACACCACAGGACAGGACCATTTTGGGTTTTGGGGGCTTCTTCATCTaGGTTTTTCCCTTTGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: LLQVEKLWTPQDRTILGFGGFFI*VFPFGT Trigger: CGTTCCAAAGGGAAAAACTCAGATGAAGAAGCCCCC...AAAACCCAAAATGGTCCTGTCCTGTGGTGTCCACAGCTTCTCCACCTGGAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
||
| CDS-3UTR CCA 90 bp | CACCAACCTCACCAAGGAGGCAAAAGGACAGTGAGTGAGATTACTTCCCTCTGGATTTCCCTCGAGGTTTaGTTGTCAGCCCCACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: HQPHQGGKRTVSEITSLWISLEV*LSAPHR Trigger: CCTGTGTGGGGCTGACAACCAAACCTCGAGGGAAAT...CCAGAGGGAAGTAATCTCACTCACTGTCCTTTTGCCTCCTTGGTGAGGTTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000140131.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGTGAGATTACTTCCCTCTGGGAGAGGCGGGAGGAGAGCACATACCGTCACAGGTCCCTCATGAGCTaGAAGTTTCTCTGTAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSEITSLWERREESTYRHRSLMS*KFLCNS Trigger: TGAATTACAGAGAAACTTTCAGCTCATGAGGGACCT...GTGACGGTATGTGCTCTCCTCCCGCCTCTCCCAGAGGGAAGTAATCTCACTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGGACCCTCCCTCTGAAATACAGCACCAACCTCACCAAGGAGGCAAAAGGACTGAGTTTTTCCCTTTaGAACGGGCTCTGGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRTLPLKYSTNLTKEAKGLSFSL*NGLWQL Trigger: AAGCTGCCAGAGCCCGTTCCAAAGGGAAAAACTCAG...TCCTTTTGCCTCCTTGGTGAGGTTGGTGCTGTATTTCAGAGGGAGGGTCCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
||
| CDS-3UTR CCA 90 bp | CCTATTTCTGGCAAGCCATCTTCCTGCCTCTCATCCAATCCAGAGGATGCGAAATTCTTCTTCCGTTCTTaGGAGCAGCGTGGGCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PISGKPSSCLSSNPEDAKFFFRS*EQRGQN Trigger: GTTTTGCCCACGCTGCTCCCAAGAACGGAAGAAGAA...TTTCGCATCCTCTGGATTGGATGAGAGGCAGGAAGATGGCTTGCCAGAAATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032480.14 |
||
| 3UTR CAA 72 bp | AATGGAATCCAGGGAAACCTATTTCTTCTTCCGTTCTaGGGAGCAGCGTGGGCAAAACCATTTCCCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NGIQGNLFLLPF*GAAWAKPFPSR Trigger: CCTCGAGGGAAATGGTTTTGCCCACGCTGCTCCCAAGAACGGAAGAAGAAATAGGTTTCCCTGGATTCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112417.9 |
||
| CDS-3UTR CCA 90 bp | AGGTGGAGAAGCTGTGGACACCACAGGACAGGACCATTTTGGGTTTTATGTCTTCTGAGTTTTTCCCTTTaGAACGGGCTCTGGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RWRSCGHHRTGPFWVLCLLSFSL*NGLWQL Trigger: AAGCTGCCAGAGCCCGTTCCAAAGGGAAAAACTCAG...AAGACATAAAACCCAAAATGGTCCTGTCCTGTGGTGTCCACAGCTTCTCCACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
||
| 3UTR CAA 72 bp | GACACCACAGGACAGGACCATTTTGGGTTTTATGTCTaGTCCTATTTCTGGCAAGCCATCTTCCTGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DTTGQDHFGFYV*SYFWQAIFLPL Trigger: GAGAGGCAGGAAGATGGCTTGCCAGAAATAGGACAAGACATAAAACCCAAAATGGTCCTGTCCTGTGGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
||
| 3UTR CAA 72 bp | GTGGAGAAGCTGTGGACACCACAGGACAGGACCATTTaGGGTTTTATGTCTTGTCCTATTTCTGGCAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VEKLWTPQDRTI*GFMSCPISGKP Trigger: TGGCTTGCCAGAAATAGGACAAGACATAAAACCCAAAATGGTCCTGTCCTGTGGTGTCCACAGCTTCTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
||
| CDS-3UTR TCA 90 bp | GTGGAGAAGCTGTGGACACCACAGGACAGGACCATTTTGGGTTTTATGTCTTGTGGTCTAGGTCCCTCATaGGCTGAAAGTTTCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VEKLWTPQDRTILGFMSCGLGPS*AESFSV Trigger: TACAGAGAAACTTTCAGCTCATGAGGGACCTAGACC...ACAAGACATAAAACCCAAAATGGTCCTGTCCTGTGGTGTCCACAGCTTCTCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
||
| CDS-3UTR GCA 90 bp | AGGTGGAGAAGCTGTGGACACCACAGGACAGGACCATTTTGGGTTTTATGTCTTCAAATTCCTTGCACTTaGCATAGGCCTCCTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: RWRSCGHHRTGPFWVLCLQIPCT*HRPPGS Trigger: AGATCCAGGAGGCCTATGGCAAGTGCAAGGAATTTG...AAGACATAAAACCCAAAATGGTCCTGTCCTGTGGTGTCCACAGCTTCTCCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTTGTCCTATTTCTGGCAAGCCATCTTCCTGCCTCTCATCCAATCCAGAGGAGCTGTCATAGTCACTaGACTCGATCTGTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CLVLFLASHLPASHPIQRSCHSH*TRSVSP Trigger: AGGAGAAACAGATCGAGTCCAGTGACTATGACAGCT...CCTCTGGATTGGATGAGAGGCAGGAAGATGGCTTGCCAGAAATAGGACAAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
||
| CDS-3UTR CCA 90 bp | ATACAGCACCAACCTCACCAAGGAGGCAAAAGGACAGTGAGTGAGATTACTTCCGACAAAGGCAATATGTaGGTTCGTTGGGATCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: IQHQPHQGGKRTVSEITSDKGNM*VRWDPQ Trigger: CTGTGGATCCCAACGAACCCACATATTGCCTTTGTC...GGAAGTAATCTCACTCACTGTCCTTTTGCCTCCTTGGTGAGGTTGGTGCTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000140131.8 |
||
| CDS-3UTR TCA 90 bp | CCTATTTCTGGCAAGCCATCTTCCTGCCTCTCATCCAATCCAGAGGATGCGAAAAGGTCCCTCATGAGCTaGAAGTTTCTCTGTAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: PISGKPSSCLSSNPEDAKRSLMS*KFLCNS Trigger: TGAATTACAGAGAAACTTTCAGCTCATGAGGGACCT...TTTCGCATCCTCTGGATTGGATGAGAGGCAGGAAGATGGCTTGCCAGAAATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
||
| CDS-3UTR GCA 90 bp | CAACCTCACCAAGGAGGCAAAAGGACAGTGAGTGAGATTACTTCCCTCTGGGAGCATACTCAGGACTTGTaGGCACAAGTTTTAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPHQGGKRTVSEITSLWEHTQDL*AQVLTS Trigger: AGAAGTTAAAACTTGTGCGCACAAGTCCTGAGTATG...CTCCCAGAGGGAAGTAATCTCACTCACTGTCCTTTTGCCTCCTTGGTGAGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000140131.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGAGGCAAAAGGACAGTGAGTGAGATTACTTCCCTCTGGGAGAGGCGGGAGTACTCATATATTCAGTaGCCAACTTGTCAATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGGKRTVSEITSLWERREYSYIQ*PTCQFQ Trigger: CTGAAATTGACAAGTTGGCCACTGAATATATGAGTA...CTCCCGCCTCTCCCAGAGGGAAGTAATCTCACTCACTGTCCTTTTGCCTCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAATCCAGAGGATGCGAAAAGAATGCTTACCACATATACTTAAACAGTCTCCCTCGGAGCTCAGGCTaGGGGCGCTACTCATATATT | + |
|
Preference number: 4 (lower is better) Translates to: IQSRGCEKNAYHIYLNSLPRSSG*GRYSYI Trigger: AATATATGAGTAGCGCCCGCAGCCTGAGCTCCGAGG...GAGACTGTTTAAGTATATGTGGTAAGCATTCTTTTCGCATCCTCTGGATTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
||
| CDS-3UTR GCA 90 bp | GGTTTTATGTCTTGTCCTATTTCTGGCAAGCCATCTTCCTGCCTCTCATCCAATCAAATTCCTTGCACTTaGCATAGGCCTCCTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: GFMSCPISGKPSSCLSSNQIPCT*HRPPGS Trigger: AGATCCAGGAGGCCTATGGCAAGTGCAAGGAATTTG...ATTGGATGAGAGGCAGGAAGATGGCTTGCCAGAAATAGGACAAGACATAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGCTGTGGACACCACAGGACAGGACCATTTTGGGTTTTATGTCTTGTCCTAAGCTGTCATAGTCACTaGACTCGATCTGTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSCGHHRTGPFWVLCLVLSCHSH*TRSVSP Trigger: AGGAGAAACAGATCGAGTCCAGTGACTATGACAGCT...TAGGACAAGACATAAAACCCAAAATGGTCCTGTCCTGTGGTGTCCACAGCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGGACCCTCCCTCTGAAATACAGCACCAACCTCACCAAGGAGGCAAAAGGATACTCATATATTCAGTaGCCAACTTGTCAATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRTLPLKYSTNLTKEAKGYSYIQ*PTCQFQ Trigger: CTGAAATTGACAAGTTGGCCACTGAATATATGAGTA...TCCTTTTGCCTCCTTGGTGAGGTTGGTGCTGTATTTCAGAGGGAGGGTCCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTTTTATGTCTTGTCCTATTTCTGGCAAGCCATCTTCCTGCCTCTCATCCACATACTCAGGACTTGTaGGCACAAGTTTTAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WVLCLVLFLASHLPASHPHTQDL*AQVLTS Trigger: AGAAGTTAAAACTTGTGCGCACAAGTCCTGAGTATG...TGGATGAGAGGCAGGAAGATGGCTTGCCAGAAATAGGACAAGACATAAAACCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032480.14 |
||
| CDS-3UTR CCA 90 bp | GTGGAGAAGCTGTGGACACCACAGGACAGGACCATTTTGGGTTTTATGTCTTGTTACTCATATATTCAGTaGCCAACTTGTCAATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VEKLWTPQDRTILGFMSCYSYIQ*PTCQFQ Trigger: CTGAAATTGACAAGTTGGCCACTGAATATATGAGTA...ACAAGACATAAAACCCAAAATGGTCCTGTCCTGTGGTGTCCACAGCTTCTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
||
| CDS-3UTR CAA 90 bp | CGTCCCCAGCACAGGCCTTCCACTCTGTCCACTAGCCCAGGTCAGGGGGATGCATCCCTCGAGGTTTGGTaGTCAGCCCCACACAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RPQHRPSTLSTSPGQGDASLEVW*SAPHRR Trigger: TCGCCTGTGTGGGGCTGACAACCAAACCTCGAGGGA...TGCATCCCCCTGACCTGGGCTAGTGGACAGAGTGGAAGGCCTGTGCTGGGGACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000140131.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGCACATACCGTCACTGGCTGCAGCACCCTCCCTACTGGGGTTTGGATGCATCCCTCGAGGTTTGGTaGTCAGCCCCACACAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: ESTYRHWLQHPPYWGLDASLEVW*SAPHRR Trigger: TCGCCTGTGTGGGGCTGACAACCAAACCTCGAGGGA...TGCATCCAAACCCCAGTAGGGAGGGTGCTGCAGCCAGTGACGGTATGTGCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000140131.8 |
||
| CDS-3UTR CAA 90 bp | CGTCCCCAGCACAGGCCTTCCACTCTGTCCACTAGCCCAGGTCAGGGGGATGCACAATATGTGGGTTCGTaGGGATCCACAGGCATATCC | + |
|
Preference number: 5 (lower is better) Translates to: RPQHRPSTLSTSPGQGDAQYVGS*GSTGIS Trigger: GGATATGCCTGTGGATCCCAACGAACCCACATATTG...TGCATCCCCCTGACCTGGGCTAGTGGACAGAGTGGAAGGCCTGTGCTGGGGACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000140131.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAGCACCCTCCCTACTGGGGTTTGGATGCAGCCTCAGCACCGAGTGGGGAGTTTCTTCTTCCGTTCTaGGGAGCAGCGTGGGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQHPPYWGLDAASAPSGEFLLPF*GAAWAK Trigger: TTTTGCCCACGCTGCTCCCAAGAACGGAAGAAGAAA...CTCCCCACTCGGTGCTGAGGCTGCATCCAAACCCCAGTAGGGAGGGTGCTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000140131.8 |
||
| CDS-3UTR CAA 90 bp | AGCACCGAGTGGGGAGGAGGGAGAGGGATGACGGTACCGCACTGTCCACATCTCTTTCTTCTTCCGTTCTaGGGAGCAGCGTGGGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: STEWGGGRGMTVPHCPHLFLLPF*GAAWAK Trigger: TTTTGCCCACGCTGCTCCCAAGAACGGAAGAAGAAA...GAGATGTGGACAGTGCGGTACCGTCATCCCTCTCCCTCCTCCCCACTCGGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000140131.8 |
||
| CDS-3UTR CAA 90 bp | CGTCCCCAGCACAGGCCTTCCACTCTGTCCACTAGCCCAGGTCAGGGGGATGCATATTCAGTGGCCAACTaGTCAATTTCAGCCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPQHRPSTLSTSPGQGDAYSVAN*SISAFR Trigger: CCTGAAGGCTGAAATTGACAAGTTGGCCACTGAATA...TGCATCCCCCTGACCTGGGCTAGTGGACAGAGTGGAAGGCCTGTGCTGGGGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAGCACCCTCCCTACTGGGGTTTGGATGCAGCCTCAGCACCGAGTGGGGAGTATTCAGTGGCCAACTaGTCAATTTCAGCCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQHPPYWGLDAASAPSGEYSVAN*SISAFR Trigger: CCTGAAGGCTGAAATTGACAAGTTGGCCACTGAATA...CTCCCCACTCGGTGCTGAGGCTGCATCCAAACCCCAGTAGGGAGGGTGCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
||
| CDS-3UTR CAA 90 bp | GAAGACCCCTCCCCATGGAGAACAGGAAGAGTGCAGAGAAGGCAGTCTGTCCTGCATTTCCCTCGAGGTTaGGTTGTCAGCCCCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: EDPSPWRTGRVQRRQSVLHFPRG*VVSPTQ Trigger: CTGTGTGGGGCTGACAACCAAACCTCGAGGGAAATG...CAGGACAGACTGCCTTCTCTGCACTCTTCCTGTTCTCCATGGGGAGGGGTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000140131.8 |
||
| CDS-3UTR CAA 90 bp | AGACCCCTCCCCATGGAGAACAGGAAGAGTGCAGAGAAGGCAGTCTGTCCTGCCCAATATGTGGGTTCGTaGGGATCCACAGGCATATCC | + |
|
Preference number: 5 (lower is better) Translates to: RPLPMENRKSAEKAVCPAQYVGS*GSTGIS Trigger: GGATATGCCTGTGGATCCCAACGAACCCACATATTG...GGCAGGACAGACTGCCTTCTCTGCACTCTTCCTGTTCTCCATGGGGAGGGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000140131.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGAATGAAGAGGACCCTCCCTCTGAAATACAGCACCAACCTCACCAAGGAGCATTTCCCTCGAGGTTaGGTTGTCAGCCCCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: RGMKRTLPLKYSTNLTKEHFPRG*VVSPTQ Trigger: CTGTGTGGGGCTGACAACCAAACCTCGAGGGAAATG...CTCCTTGGTGAGGTTGGTGCTGTATTTCAGAGGGAGGGTCCTCTTCATTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000140131.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGTGAGATTACTTCCCTCTGGGAGAGGCGGGAGGAGAGCACATACCGTCACGTCCGGCCTTTCTTTTaGCCTTTGCTAGAAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSEITSLWERREESTYRHVRPFF*PLLEEL Trigger: CAGCTCTTCTAGCAAAGGCAAAAAGAAAGGCCGGAC...GTGACGGTATGTGCTCTCCTCCCGCCTCTCCCAGAGGGAAGTAATCTCACTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140131.8 |
||
| CDS CCA 90 bp | GCTTCTCCTCGGAGCTCAGGCTGCGGGCGCTACTCATATATTCAGTaGCCAACTTGTCAATTTCAGCCTTCAGGTCCTCTGTCCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ASPRSSGCGRYSYIQ*PTCQFQPSGPLSFG Trigger: ACCAAAGGACAGAGGACCTGAAGGCTGAAATTGACAAGTTGGCCACTGAATATATGAGTAGCGCCCGCAGCCTGAGCTCCGAGGAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| CDS-3UTR CAA 90 bp | AGGGGAATGAAGAGGACCCTCCCTCTGAAATACAGCACCAACCTCACCAAGGAGTGGGTCCGGCTCTTTTaGCCTTTGCTAGAAGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: RGMKRTLPLKYSTNLTKEWVRLF*PLLEEL Trigger: CAGCTCTTCTAGCAAAGGCAAAAAGAGCCGGACCCA...CTCCTTGGTGAGGTTGGTGCTGTATTTCAGAGGGAGGGTCCTCTTCATTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032480.14 |
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| CDS-3UTR CAA 90 bp | GGCCTTCCACTCTGTCCACTAGCCCAGGTCAGGGGGATGCAGAAGTCTGTAATGATGGAACAATCCGGGTaGTCACAGCCAATCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: GLPLCPLAQVRGMQKSVMMEQSG*SQPIIS Trigger: AGAGATGATTGGCTGTGACAACCCGGATTGTTCCAT...CATTACAGACTTCTGCATCCCCCTGACCTGGGCTAGTGGACAGAGTGGAAGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000140131.8 |
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| CDS-3UTR CAA 90 bp | CTCCTCCAGGTGGAGAAGCTGTGGACACCACAGGACAGGACCATTTTGGGTTTTATGGAACAATCCGGGTaGTCACAGCCAATCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: LLQVEKLWTPQDRTILGFMEQSG*SQPIIS Trigger: AGAGATGATTGGCTGTGACAACCCGGATTGTTCCAT...AAAACCCAAAATGGTCCTGTCCTGTGGTGTCCACAGCTTCTCCACCTGGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032480.14 |
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| CDS-3UTR CAA 90 bp | TGGAGAAGCTGTGGACACCACAGGACAGGACCATTTTGGGTTTTATGTCTTGTCTCTGAGTTTTTCCCTTaGGAACGGGCTCTGGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: WRSCGHHRTGPFWVLCLVSEFFP*ERALAA Trigger: AGCTGCCAGAGCCCGTTCCAAAGGGAAAAACTCAGA...GACAAGACATAAAACCCAAAATGGTCCTGTCCTGTGGTGTCCACAGCTTCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
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| CDS TCA 90 bp | TCAGCCTTCAGGTCCTCTGTCCTTTGGTCTAGGTCCCTCATGAGCTaGAAGTTTCTCTGTAATTCAAACGGGAGGTTTTCAATACTGTCC | + |
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Preference number: 5 (lower is better) Translates to: SAFRSSVLWSRSLMS*KFLCNSNGRFSILS Trigger: GGACAGTATTGAAAACCTCCCGTTTGAATTACAGAGAAACTTTCAGCTCATGAGGGACCTAGACCAAAGGACAGAGGACCTGAAGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| CDS TCA 90 bp | CAATTTCAGCCTTCAGGTCCTCTGTCCTTTGGTCTAGGTCCCTCATaGGCTGAAAGTTTCTCTGTAATTCAAACGGGAGGTTTTCAATAC | + |
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Preference number: 5 (lower is better) Translates to: QFQPSGPLSFGLGPS*AESFSVIQTGGFQY Trigger: GTATTGAAAACCTCCCGTTTGAATTACAGAGAAACTTTCAGCTCATGAGGGACCTAGACCAAAGGACAGAGGACCTGAAGGCTGAAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| CDS-3UTR CAA 90 bp | CACAGGACAGGACCATTTTGGGTTTTATGTCTTGTCCTATTTCTGGCAAGCCATTATTCAGTGGCCAACTaGTCAATTTCAGCCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: HRTGPFWVLCLVLFLASHYSVAN*SISAFR Trigger: CCTGAAGGCTGAAATTGACAAGTTGGCCACTGAATA...ATGGCTTGCCAGAAATAGGACAAGACATAAAACCCAAAATGGTCCTGTCCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 |
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| CDS CCA 72 bp | CGGAGCTCAGGCTGCGGGCGCTACTCATATATTCAGTaGCCAACTTGTCAATTTCAGCCTTCAGGTCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RSSGCGRYSYIQ*PTCQFQPSGPL Trigger: CAGAGGACCTGAAGGCTGAAATTGACAAGTTGGCCACTGAATATATGAGTAGCGCCCGCAGCCTGAGCTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| CDS CAA 90 bp | TCGGAGCTCAGGCTGCGGGCGCTACTCATATATTCAGTGGCCAACTaGTCAATTTCAGCCTTCAGGTCCTCTGTCCTTTGGTCTAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SELRLRALLIYSVAN*SISAFRSSVLWSRS Trigger: GGACCTAGACCAAAGGACAGAGGACCTGAAGGCTGAAATTGACAAGTTGGCCACTGAATATATGAGTAGCGCCCGCAGCCTGAGCTCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| CDS CAA 72 bp | AGGCTGCGGGCGCTACTCATATATTCAGTGGCCAACTaGTCAATTTCAGCCTTCAGGTCCTCTGTCCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: RLRALLIYSVAN*SISAFRSSVLW Trigger: CCAAAGGACAGAGGACCTGAAGGCTGAAATTGACAAGTTGGCCACTGAATATATGAGTAGCGCCCGCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| CDS TCA 72 bp | CCTTCAGGTCCTCTGTCCTTTGGTCTAGGTCCCTCATaGGCTGAAAGTTTCTCTGTAATTCAAACGGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: PSGPLSFGLGPS*AESFSVIQTGG Trigger: ACCTCCCGTTTGAATTACAGAGAAACTTTCAGCTCATGAGGGACCTAGACCAAAGGACAGAGGACCTGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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| CDS TCA 72 bp | AGGTCCTCTGTCCTTTGGTCTAGGTCCCTCATGAGCTaGAAGTTTCTCTGTAATTCAAACGGGAGGTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: RSSVLWSRSLMS*KFLCNSNGRFS Trigger: TGAAAACCTCCCGTTTGAATTACAGAGAAACTTTCAGCTCATGAGGGACCTAGACCAAAGGACAGAGGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032480.14 ENSMUST00000112417.9 ENSMUST00000140131.8 |
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