Pregenerated sensors for ING2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063049Ensembl transcript IDs: ENSMUST00000080353.3
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAAACAGCATGAGAGTTGAAGGTGGGGGTGGAATAGGCGTGGCTTaGGAAGCTGCTTGCAGTTCGTTCATACGCCTCTCTGCCTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: PNSMRVEGGGGIGVA*EAACSSFIRLSACS Trigger: GGAGCAGGCAGAGAGGCGTATGAACGAACTGCAAGCAGCTTCCCAAGCCACGCCTATTCCACCCCCACCTTCAACTCTCATGCTGTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR GCA 90 bp | AGGCGTGGCTTGGGAAGCTGCTTGCAGTTCGTTCATACGCCTCTCTaGCTGCTCCTTTCATTAGGTCCTCACAGAGACTACCTGGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: RRGLGSCLQFVHTPL*LLLSLGPHRDYLAE Trigger: TTCAGCCAGGTAGTCTCTGTGAGGACCTAATGAAAGGAGCAGGCAGAGAGGCGTATGAACGAACTGCAAGCAGCTTCCCAAGCCACGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR CCA 90 bp | CGCAGTGGACACTCCAGGAAGAGCGCACTAGTCCATGTGGGAGCATaGGTACTGTTGTCTCTAGTTCCTGGAATTTCTGGGAGACTAGAG | + |
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Preference number: 1 (lower is better) Translates to: RSGHSRKSALVHVGA*VLLSLVPGISGRLE Trigger: CTCTAGTCTCCCAGAAATTCCAGGAACTAGAGACAACAGTACCCATGCTCCCACATGGACTAGTGCGCTCTTCCTGGAGTGTCCACTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR CCA 90 bp | ACGCTACAACTGACAGGTAACAAAAGCTACCAAGAAAATACGCAGTaGACACTCCAGGAAGAGCGCACTAGTCCATGTGGGAGCATGGGT | + |
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Preference number: 1 (lower is better) Translates to: TLQLTGNKSYQENTQ*TLQEERTSPCGSMG Trigger: ACCCATGCTCCCACATGGACTAGTGCGCTCTTCCTGGAGTGTCCACTGCGTATTTTCTTGGTAGCTTTTGTTACCTGTCAGTTGTAGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR TCA 90 bp | AAGCAAGCCATTTCATTGTTAAAATCGTTCACCACGGCACAACACTaGAATTTCAAAAGGCCCTTGCAGATGGTTAAGCCAACTCATTTT | + |
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Preference number: 1 (lower is better) Translates to: KQAISLLKSFTTAQH*NFKRPLQMVKPTHF Trigger: AAAATGAGTTGGCTTAACCATCTGCAAGGGCCTTTTGAAATTTCAGTGTTGTGCCGTGGTGAACGATTTTAACAATGAAATGGCTTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR-3UTR CCA 90 bp | CTAGTCCGTCTGCTGCTCTCCATAACCAAAAACTGCTCCCACACATGGTCACAGGGAATAGGCGTGGCTTaGGAAGCTGCTTGCAGTTCG | + |
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Preference number: 2 (lower is better) Translates to: LVRLLLSITKNCSHTWSQGIGVA*EAACSS Trigger: CGAACTGCAAGCAGCTTCCCAAGCCACGCCTATTCC...CTGTGACCATGTGTGGGAGCAGTTTTTGGTTATGGAGAGCAGCAGACGGACTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR-3UTR CCA 90 bp | GGACTAGTCCGTCTGCTGCTCTCCATAACCAAAAACTGCTCCCACACATGGTCACAAGAAAATACGCAGTaGACACTCCAGGAAGAGCGC | + |
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Preference number: 2 (lower is better) Translates to: GLVRLLLSITKNCSHTWSQENTQ*TLQEER Trigger: GCGCTCTTCCTGGAGTGTCCACTGCGTATTTTCTTG...TGACCATGTGTGGGAGCAGTTTTTGGTTATGGAGAGCAGCAGACGGACTAGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR-3UTR TCA 90 bp | AAAGGACTAGTCCGTCTGCTGCTCTCCATAACCAAAAACTGCTCCCACACATGGGAGGTGTGTCTGTTCTaGAGAAGCAGGGGCTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: KGLVRLLLSITKNCSHTWEVCLF*RSRGFY Trigger: GTAAAAGCCCCTGCTTCTTCAGAACAGACACACCTC...CCATGTGTGGGAGCAGTTTTTGGTTATGGAGAGCAGCAGACGGACTAGTCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR-3UTR TCA 90 bp | AAAGGACTAGTCCGTCTGCTGCTCTCCATAACCAAAAACTGCTCCCACACATGGGATTTAACAAGTGTCTaGAGACATGGAGGCAATAAG | + |
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Preference number: 2 (lower is better) Translates to: KGLVRLLLSITKNCSHTWDLTSV*RHGGNK Trigger: CTTATTGCCTCCATGTCTTCAGACACTTGTTAAATC...CCATGTGTGGGAGCAGTTTTTGGTTATGGAGAGCAGCAGACGGACTAGTCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR-3UTR CCA 90 bp | GGAAGCTGCTTGCAGTTCGTTCATACGCCTCTCTGCCTGCTCCTTTCATTAGGTCTCACAGAGACTACCTaGCTGAAAATATTTGGTAAT | + |
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Preference number: 2 (lower is better) Translates to: GSCLQFVHTPLCLLLSLGLTETT*LKIFGN Trigger: ATTACCAAATATTTTCAGCCAGGTAGTCTCTGTGAG...ACCTAATGAAAGGAGCAGGCAGAGAGGCGTATGAACGAACTGCAAGCAGCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGGACTAGTCCGTCTGCTGCTCTCCATAACCAAAAACTGCTCCCACACATGGAGTTCCTGGAATTTCTaGGAGACTAGAGATTTAACA | + |
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Preference number: 2 (lower is better) Translates to: KGLVRLLLSITKNCSHTWSSWNF*ETRDLT Trigger: TGTTAAATCTCTAGTCTCCCAGAAATTCCAGGAACT...CCATGTGTGGGAGCAGTTTTTGGTTATGGAGAGCAGCAGACGGACTAGTCCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR-3UTR GCA 90 bp | ATTGTTAAAATCGTTCACCACGGCACAACACTGAAATTTCAAAAGGCCCTTGCATCCATAACCAAAAACTaGTCCCACACATGGTCACAG | + |
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Preference number: 2 (lower is better) Translates to: IVKIVHHGTTLKFQKALASITKN*SHTWSQ Trigger: CTGTGACCATGTGTGGGAGCAGTTTTTGGTTATGGA...TGCAAGGGCCTTTTGAAATTTCAGTGTTGTGCCGTGGTGAACGATTTTAACAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR CCA 72 bp | ATGAGAGTTGAAGGTGGGGGTGGAATAGGCGTGGCTTaGGAAGCTGCTTGCAGTTCGTTCATACGCCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: MRVEGGGGIGVA*EAACSSFIRLS Trigger: AGAGAGGCGTATGAACGAACTGCAAGCAGCTTCCCAAGCCACGCCTATTCCACCCCCACCTTCAACTCTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR GCA 72 bp | GGACTAGTCCGTCTGCTGCTCTCCATAACCAAAAACTaGTCCCACACATGGTCACAGCTCCACCAAGATGCT | + |
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Preference number: 3 (lower is better) Translates to: GLVRLLLSITKN*SHTWSQLHQDA Trigger: AGCATCTTGGTGGAGCTGTGACCATGTGTGGGAGCAGTTTTTGGTTATGGAGAGCAGCAGACGGACTAGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR CCA 72 bp | CACTCCAGGAAGAGCGCACTAGTCCATGTGGGAGCATaGGTACTGTTGTCTCTAGTTCCTGGAATTTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: HSRKSALVHVGA*VLLSLVPGISG Trigger: CCCAGAAATTCCAGGAACTAGAGACAACAGTACCCATGCTCCCACATGGACTAGTGCGCTCTTCCTGGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR-3UTR CAA 90 bp | AAAGGACTAGTCCGTCTGCTGCTCTCCATAACCAAAAACTGCTCCCACACATGGTGGAATAGGCGTGGCTaGGGAAGCTGCTTGCAGTTC | + |
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Preference number: 3 (lower is better) Translates to: KGLVRLLLSITKNCSHTWWNRRG*GSCLQF Trigger: GAACTGCAAGCAGCTTCCCAAGCCACGCCTATTCCA...CCATGTGTGGGAGCAGTTTTTGGTTATGGAGAGCAGCAGACGGACTAGTCCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR GCA 72 bp | TTGGGAAGCTGCTTGCAGTTCGTTCATACGCCTCTCTaGCTGCTCCTTTCATTAGGTCCTCACAGAGACTAC | + |
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Preference number: 3 (lower is better) Translates to: LGSCLQFVHTPL*LLLSLGPHRDY Trigger: GTAGTCTCTGTGAGGACCTAATGAAAGGAGCAGGCAGAGAGGCGTATGAACGAACTGCAAGCAGCTTCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR CCA 72 bp | CTGACAGGTAACAAAAGCTACCAAGAAAATACGCAGTaGACACTCCAGGAAGAGCGCACTAGTCCATGTGGG | + |
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Preference number: 3 (lower is better) Translates to: LTGNKSYQENTQ*TLQEERTSPCG Trigger: CCCACATGGACTAGTGCGCTCTTCCTGGAGTGTCCACTGCGTATTTTCTTGGTAGCTTTTGTTACCTGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR TCA 72 bp | ATTTCATTGTTAAAATCGTTCACCACGGCACAACACTaGAATTTCAAAAGGCCCTTGCAGATGGTTAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: ISLLKSFTTAQH*NFKRPLQMVKP Trigger: TGGCTTAACCATCTGCAAGGGCCTTTTGAAATTTCAGTGTTGTGCCGTGGTGAACGATTTTAACAATGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR CAA 72 bp | AGGTGGGGGTGGAATAGGCGTGGCTTGGGAAGCTGCTaGCAGTTCGTTCATACGCCTCTCTGCCTGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: RWGWNRRGLGSC*QFVHTPLCLLL Trigger: AAGGAGCAGGCAGAGAGGCGTATGAACGAACTGCAAGCAGCTTCCCAAGCCACGCCTATTCCACCCCCACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CCA 90 bp | CCAAACAGCATGAGAGTTGAAGGTGGGGGTGGAATAGGCGTGGCTTGGGAAGCTTTCCTCTGCATGTCGTaGGGCAGCGACTCCACACAC | + |
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Preference number: 4 (lower is better) Translates to: PNSMRVEGGGGIGVAWEAFLCMS*GSDSTH Trigger: GTGTGTGGAGTCGCTGCCCCACGACATGCAGAGGAA...AGCTTCCCAAGCCACGCCTATTCCACCCCCACCTTCAACTCTCATGCTGTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR GCA 90 bp | GGAAGCTGCTTGCAGTTCGTTCATACGCCTCTCTGCCTGCTCCTTTCATTAGGTGACGAGTACAGCTGCTaGTGCTGCTGCTGCCCTAAC | + |
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Preference number: 4 (lower is better) Translates to: GSCLQFVHTPLCLLLSLGDEYSC*CCCCPN Trigger: GTTAGGGCAGCAGCAGCAGCAGCAGCTGTACTCGTC...ACCTAATGAAAGGAGCAGGCAGAGAGGCGTATGAACGAACTGCAAGCAGCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR GCA 90 bp | AAAGGACTAGTCCGTCTGCTGCTCTCCATAACCAAAAACTGCTCCCACACATGGACCGACACGTTCCTCTaGATGTCGTGGGGCAGCGAC | + |
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Preference number: 4 (lower is better) Translates to: KGLVRLLLSITKNCSHTWTDTFL*MSWGSD Trigger: GTCGCTGCCCCACGACATGCAGAGGAACGTGTCGGT...CCATGTGTGGGAGCAGTTTTTGGTTATGGAGAGCAGCAGACGGACTAGTCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR GCA 90 bp | GGACTAGTCCGTCTGCTGCTCTCCATAACCAAAAACTGCTCCCACACATGGTCAAAACTCGACAGGGGATaGCTCCCTCTCCTGCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: GLVRLLLSITKNCSHTWSKLDRG*LPLLLG Trigger: GCCAAGCAGGAGAGGGAGGCATCCCCTGTCGAGTTT...TGACCATGTGTGGGAGCAGTTTTTGGTTATGGAGAGCAGCAGACGGACTAGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR TCA 90 bp | CCAAACAGCATGAGAGTTGAAGGTGGGGGTGGAATAGGCGTGGCTTGGGAAGCTGAAGATCTTTCCGGTTaGCTGGAATCCATCTTCGAC | + |
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Preference number: 4 (lower is better) Translates to: PNSMRVEGGGGIGVAWEAEDLSG*LESIFD Trigger: GTCGAAGATGGATTCCAGTCAACCGGAAAGATCTTC...AGCTTCCCAAGCCACGCCTATTCCACCCCCACCTTCAACTCTCATGCTGTTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR TCA 90 bp | CCAAACAGCATGAGAGTTGAAGGTGGGGGTGGAATAGGCGTGGCTTGGGAAGCTCCAATTCTTGGCTATTaGTTAACGCTCTCTGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: PNSMRVEGGGGIGVAWEAPILGY*LTLSGD Trigger: ATCTCCAGAGAGCGTTAATCAATAGCCAAGAATTGG...AGCTTCCCAAGCCACGCCTATTCCACCCCCACCTTCAACTCTCATGCTGTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR TCA 90 bp | GGACTAGTCCGTCTGCTGCTCTCCATAACCAAAAACTGCTCCCACACATGGTCAATCCCGTTTGTCATGTaGCATAAGTCACGGCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: GLVRLLLSITKNCSHTWSIPFVM*HKSRLS Trigger: TGAGAGCCGTGACTTATGTCACATGACAAACGGGAT...TGACCATGTGTGGGAGCAGTTTTTGGTTATGGAGAGCAGCAGACGGACTAGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CCA 90 bp | GTTCATACGCCTCTCTGCCTGCTCCTTTCATTAGGTCCTCACAGAGACTACCTGTTGATTAACGCTCTCTaGAGATGCTGCTGTAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: VHTPLCLLLSLGPHRDYLLINAL*RCCCRR Trigger: ACGCCTACAGCAGCATCTCCAGAGAGCGTTAATCAA...CAGGTAGTCTCTGTGAGGACCTAATGAAAGGAGCAGGCAGAGAGGCGTATGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CCA 90 bp | CCAAACAGCATGAGAGTTGAAGGTGGGGGTGGAATAGGCGTGGCTTGGGAAGCTATCTTTCCGGTTGACTaGAATCCATCTTCGACTTGT | + |
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Preference number: 4 (lower is better) Translates to: PNSMRVEGGGGIGVAWEAIFPVD*NPSSTC Trigger: ACAAGTCGAAGATGGATTCCAGTCAACCGGAAAGAT...AGCTTCCCAAGCCACGCCTATTCCACCCCCACCTTCAACTCTCATGCTGTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| 3UTR CAA 72 bp | AAGAGCGCACTAGTCCATGTGGGAGCATGGGTACTGTaGTCTCTAGTTCCTGGAATTTCTGGGAGACTAGAG | + |
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Preference number: 4 (lower is better) Translates to: KSALVHVGAWVL*SLVPGISGRLE Trigger: CTCTAGTCTCCCAGAAATTCCAGGAACTAGAGACAACAGTACCCATGCTCCCACATGGACTAGTGCGCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR GCA 90 bp | GGACTAGTCCGTCTGCTGCTCTCCATAACCAAAAACTGCTCCCACACATGGTCATGGAAACACTGTGAATaGAGCTCCATTTGTCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: GLVRLLLSITKNCSHTWSWKHCE*SSICLA Trigger: AGCGAGACAAATGGAGCTGCATTCACAGTGTTTCCA...TGACCATGTGTGGGAGCAGTTTTTGGTTATGGAGAGCAGCAGACGGACTAGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CCA 90 bp | AAAGGACTAGTCCGTCTGCTGCTCTCCATAACCAAAAACTGCTCCCACACATGGCTTTCAGCAGGATCCTaGAAACACTGTGAATGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KGLVRLLLSITKNCSHTWLSAGS*KHCECS Trigger: GCTGCATTCACAGTGTTTCCAGGATCCTGCTGAAAG...CCATGTGTGGGAGCAGTTTTTGGTTATGGAGAGCAGCAGACGGACTAGTCCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CCA 90 bp | GTTCATACGCCTCTCTGCCTGCTCCTTTCATTAGGTCCTCACAGAGACTACCTGCGGTACTTTTGTCCATaGTTTTCTCATTGTCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: VHTPLCLLLSLGPHRDYLRYFCP*FSHCLP Trigger: GGGGAGACAATGAGAAAACCATGGACAAAAGTACCG...CAGGTAGTCTCTGTGAGGACCTAATGAAAGGAGCAGGCAGAGAGGCGTATGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR TCA 90 bp | GGAAGCTGCTTGCAGTTCGTTCATACGCCTCTCTGCCTGCTCCTTTCATTAGGTTTTTCTTTCGGTGGTTaGTCATCACAGTCGTCAATC | + |
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Preference number: 4 (lower is better) Translates to: GSCLQFVHTPLCLLLSLGFSFGG*SSQSSI Trigger: GATTGACGACTGTGATGATCAACCACCGAAAGAAAA...ACCTAATGAAAGGAGCAGGCAGAGAGGCGTATGAACGAACTGCAAGCAGCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CCA 90 bp | GGAAGCTGCTTGCAGTTCGTTCATACGCCTCTCTGCCTGCTCCTTTCATTAGGTTCTCTTTTCTTTCGGTaGTTGATCATCACAGTCGTC | + |
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Preference number: 4 (lower is better) Translates to: GSCLQFVHTPLCLLLSLGSLFFR*LIITVV Trigger: GACGACTGTGATGATCAACCACCGAAAGAAAAGAGA...ACCTAATGAAAGGAGCAGGCAGAGAGGCGTATGAACGAACTGCAAGCAGCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR TCA 90 bp | GGAAGCTGCTTGCAGTTCGTTCATACGCCTCTCTGCCTGCTCCTTTCATTAGGTCCTTGGGTTTATAGGTaGGTGAAACACATGAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: GSCLQFVHTPLCLLLSLGPWVYR*VKHMKS Trigger: ACTTTTCATGTGTTTCACTCACCTATAAACCCAAGG...ACCTAATGAAAGGAGCAGGCAGAGAGGCGTATGAACGAACTGCAAGCAGCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CCA 90 bp | CTAGTCCGTCTGCTGCTCTCCATAACCAAAAACTGCTCCCACACATGGTCACAGTCCTTTAACGTTTCTTaGTATTTGTTGTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LVRLLLSITKNCSHTWSQSFNVS*YLLSSS Trigger: GGAGCTGGACAACAAATACCAAGAAACGTTAAAGGA...CTGTGACCATGTGTGGGAGCAGTTTTTGGTTATGGAGAGCAGCAGACGGACTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CCA 90 bp | GGACTAGTCCGTCTGCTGCTCTCCATAACCAAAAACTGCTCCCACACATGGTCATCATCTCCCAATTCTTaGCTATTGATTAACGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: GLVRLLLSITKNCSHTWSSSPNS*LLINAL Trigger: GAGAGCGTTAATCAATAGCCAAGAATTGGGAGATGA...TGACCATGTGTGGGAGCAGTTTTTGGTTATGGAGAGCAGCAGACGGACTAGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR TCA 90 bp | AAAGGACTAGTCCGTCTGCTGCTCTCCATAACCAAAAACTGCTCCCACACATGGGAAACACATGAAAAGTaGAACCATTCAATGGGACAC | + |
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Preference number: 4 (lower is better) Translates to: KGLVRLLLSITKNCSHTWETHEK*NHSMGH Trigger: GTGTCCCATTGAATGGTTTCACTTTTCATGTGTTTC...CCATGTGTGGGAGCAGTTTTTGGTTATGGAGAGCAGCAGACGGACTAGTCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CCA 90 bp | ATTGTTAAAATCGTTCACCACGGCACAACACTGAAATTTCAAAAGGCCCTTGCAAGTAGGTGGGCTCATTaGGATCGATGGCAAACTCGA | + |
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Preference number: 4 (lower is better) Translates to: IVKIVHHGTTLKFQKALASRWAH*DRWQTR Trigger: TCGAGTTTGCCATCGATCCCAATGAGCCCACCTACT...TGCAAGGGCCTTTTGAAATTTCAGTGTTGTGCCGTGGTGAACGATTTTAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CCA 90 bp | ATTGTTAAAATCGTTCACCACGGCACAACACTGAAATTTCAAAAGGCCCTTGCAAGCGCTTCTTCTTCTTaGCGGACTTGGATCTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: IVKIVHHGTTLKFQKALASASSS*RTWISF Trigger: AAAAGAGATCCAAGTCCGCCAAGAAGAAGAAGCGCT...TGCAAGGGCCTTTTGAAATTTCAGTGTTGTGCCGTGGTGAACGATTTTAACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS CCA 90 bp | TCTCCCCGTAGGACACTTGGTTACACAAGCAGTAGGTGGGCTCATTaGGATCGATGGCAAACTCGACAGGGGATGCCTCCCTCTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: SPRRTLGYTSSRWAH*DRWQTRQGMPPSPA Trigger: AGCAGGAGAGGGAGGCATCCCCTGTCGAGTTTGCCATCGATCCCAATGAGCCCACCTACTGCTTGTGTAACCAAGTGTCCTACGGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CAA 90 bp | CCAAACAGCATGAGAGTTGAAGGTGGGGGTGGAATAGGCGTGGCTTGGGAAGCTGTTTCTTGGTATTTGTaGTCCAGCTCCCGCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: PNSMRVEGGGGIGVAWEAVSWYL*SSSRST Trigger: GGTGCTGCGGGAGCTGGACAACAAATACCAAGAAAC...AGCTTCCCAAGCCACGCCTATTCCACCCCCACCTTCAACTCTCATGCTGTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS GCA 90 bp | TCTGAGGCTCGCTCACTTTCAGCAGGATCCTGGAAACACTGTGAATaGAGCTCCATTTGTCTCGCTCGGTTCTCCACCAATTCGAGCATC | + |
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Preference number: 5 (lower is better) Translates to: SEARSLSAGSWKHCE*SSICLARFSTNSSI Trigger: GATGCTCGAATTGGTGGAGAACCGAGCGAGACAAATGGAGCTGCATTCACAGTGTTTCCAGGATCCTGCTGAAAGTGAGCGAGCCTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS CCA 90 bp | TCCATCTTCGACTTGTCTGAGGCTCGCTCACTTTCAGCAGGATCCTaGAAACACTGTGAATGCAGCTCCATTTGTCTCGCTCGGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SIFDLSEARSLSAGS*KHCECSSICLARFS Trigger: GGAGAACCGAGCGAGACAAATGGAGCTGCATTCACAGTGTTTCCAGGATCCTGCTGAAAGTGAGCGAGCCTCAGACAAGTCGAAGATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CAA 90 bp | GGAAGCTGCTTGCAGTTCGTTCATACGCCTCTCTGCCTGCTCCTTTCATTAGGTAACGTTTCTTGGTATTaGTTGTCCAGCTCCCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: GSCLQFVHTPLCLLLSLGNVSWY*LSSSRS Trigger: GCTGCGGGAGCTGGACAACAAATACCAAGAAACGTT...ACCTAATGAAAGGAGCAGGCAGAGAGGCGTATGAACGAACTGCAAGCAGCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CAA 90 bp | GTTCATACGCCTCTCTGCCTGCTCCTTTCATTAGGTCCTCACAGAGACTACCTGGAATCCATCTTCGACTaGTCTGAGGCTCGCTCACTT | + |
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Preference number: 5 (lower is better) Translates to: VHTPLCLLLSLGPHRDYLESIFD*SEARSL Trigger: AAGTGAGCGAGCCTCAGACAAGTCGAAGATGGATTC...CAGGTAGTCTCTGTGAGGACCTAATGAAAGGAGCAGGCAGAGAGGCGTATGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CAA 90 bp | GGACTAGTCCGTCTGCTGCTCTCCATAACCAAAAACTGCTCCCACACATGGTCATGTCTCCCCTACACTTaGGGCAATACCATTTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: GLVRLLLSITKNCSHTWSCLPYT*GNTISP Trigger: AGGGGAAATGGTATTGCCCAAAGTGTAGGGGAGACA...TGACCATGTGTGGGAGCAGTTTTTGGTTATGGAGAGCAGCAGACGGACTAGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS TCA 90 bp | TCACTGGTCCTCTGTCTTCGAGGTCTTCTAGAAGATCTTTCCGGTTaGCTGGAATCCATCTTCGACTTGTCTGAGGCTCGCTCACTTTCA | + |
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Preference number: 5 (lower is better) Translates to: SLVLCLRGLLEDLSG*LESIFDLSEARSLS Trigger: TGAAAGTGAGCGAGCCTCAGACAAGTCGAAGATGGATTCCAGTCAACCGGAAAGATCTTCTAGAAGACCTCGAAGACAGAGGACCAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CAA 90 bp | GTTCATACGCCTCTCTGCCTGCTCCTTTCATTAGGTCCTCACAGAGACTACCTGAGAAGATCTTTCCGGTaGACTGGAATCCATCTTCGA | + |
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Preference number: 5 (lower is better) Translates to: VHTPLCLLLSLGPHRDYLRRSFR*TGIHLR Trigger: TCGAAGATGGATTCCAGTCAACCGGAAAGATCTTCT...CAGGTAGTCTCTGTGAGGACCTAATGAAAGGAGCAGGCAGAGAGGCGTATGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CAA 90 bp | GTTCATACGCCTCTCTGCCTGCTCCTTTCATTAGGTCCTCACAGAGACTACCTGAGTCGTCAATCCCGTTaGTCATGTGACATAAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: VHTPLCLLLSLGPHRDYLSRQSR*SCDISH Trigger: GTGACTTATGTCACATGACAAACGGGATTGACGACT...CAGGTAGTCTCTGTGAGGACCTAATGAAAGGAGCAGGCAGAGAGGCGTATGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CAA 90 bp | AAAGGACTAGTCCGTCTGCTGCTCTCCATAACCAAAAACTGCTCCCACACATGGATGGGACACTGTTCATaGTCACAGCCTATCATCTCC | + |
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Preference number: 5 (lower is better) Translates to: KGLVRLLLSITKNCSHTWMGHCS*SQPIIS Trigger: GGAGATGATAGGCTGTGACAATGAACAGTGTCCCAT...CCATGTGTGGGAGCAGTTTTTGGTTATGGAGAGCAGCAGACGGACTAGTCCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CAA 90 bp | GTTCATACGCCTCTCTGCCTGCTCCTTTCATTAGGTCCTCACAGAGACTACCTGCTTTTCTTTCGGTGGTaGATCATCACAGTCGTCAAT | + |
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Preference number: 5 (lower is better) Translates to: VHTPLCLLLSLGPHRDYLLFFRW*IITVVN Trigger: ATTGACGACTGTGATGATCAACCACCGAAAGAAAAG...CAGGTAGTCTCTGTGAGGACCTAATGAAAGGAGCAGGCAGAGAGGCGTATGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CAA 90 bp | GGAAGCTGCTTGCAGTTCGTTCATACGCCTCTCTGCCTGCTCCTTTCATTAGGTGTCTTTTCGGTACTTTaGTCCATGGTTTTCTCATTG | + |
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Preference number: 5 (lower is better) Translates to: GSCLQFVHTPLCLLLSLGVFSVL*SMVFSL Trigger: CAATGAGAAAACCATGGACAAAAGTACCGAAAAGAC...ACCTAATGAAAGGAGCAGGCAGAGAGGCGTATGAACGAACTGCAAGCAGCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CAA 90 bp | ATTGTTAAAATCGTTCACCACGGCACAACACTGAAATTTCAAAAGGCCCTTGCAGAGCGCTTCTTCTTCTaGGCGGACTTGGATCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: IVKIVHHGTTLKFQKALAERFFF*ADLDLF Trigger: AAAGAGATCCAAGTCCGCCAAGAAGAAGAAGCGCTC...TGCAAGGGCCTTTTGAAATTTCAGTGTTGTGCCGTGGTGAACGATTTTAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS-3UTR CAA 90 bp | ATTGTTAAAATCGTTCACCACGGCACAACACTGAAATTTCAAAAGGCCCTTGCACCCAATTCTTGGCTATaGATTAACGCTCTCTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: IVKIVHHGTTLKFQKALAPNSWL*INALWR Trigger: TCTCCAGAGAGCGTTAATCAATAGCCAAGAATTGGG...TGCAAGGGCCTTTTGAAATTTCAGTGTTGTGCCGTGGTGAACGATTTTAACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS GCA 72 bp | TTGTTGTCCAGCTCCCGCAGCACCGACACGTTCCTCTaGATGTCGTGGGGCAGCGACTCCACACACTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LLSSSRSTDTFL*MSWGSDSTHSR Trigger: CCTGGAGTGTGTGGAGTCGCTGCCCCACGACATGCAGAGGAACGTGTCGGTGCTGCGGGAGCTGGACAACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS CCA 72 bp | AGGACACTTGGTTACACAAGCAGTAGGTGGGCTCATTaGGATCGATGGCAAACTCGACAGGGGATGCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RTLGYTSSRWAH*DRWQTRQGMPP Trigger: GGGAGGCATCCCCTGTCGAGTTTGCCATCGATCCCAATGAGCCCACCTACTGCTTGTGTAACCAAGTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS CCA 72 bp | TCTCCCCGTAGGACACTTGGTTACACAAGCAGTAGGTaGGCTCATTGGGATCGATGGCAAACTCGACAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SPRRTLGYTSSR*AHWDRWQTRQG Trigger: CCCCTGTCGAGTTTGCCATCGATCCCAATGAGCCCACCTACTGCTTGTGTAACCAAGTGTCCTACGGGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS GCA 72 bp | CGCTCACTTTCAGCAGGATCCTGGAAACACTGTGAATaGAGCTCCATTTGTCTCGCTCGGTTCTCCACCAAT | + |
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Preference number: 6 (lower is better) Translates to: RSLSAGSWKHCE*SSICLARFSTN Trigger: ATTGGTGGAGAACCGAGCGAGACAAATGGAGCTGCATTCACAGTGTTTCCAGGATCCTGCTGAAAGTGAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS CCA 72 bp | GACTTGTCTGAGGCTCGCTCACTTTCAGCAGGATCCTaGAAACACTGTGAATGCAGCTCCATTTGTCTCGCT | + |
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Preference number: 6 (lower is better) Translates to: DLSEARSLSAGS*KHCECSSICLA Trigger: AGCGAGACAAATGGAGCTGCATTCACAGTGTTTCCAGGATCCTGCTGAAAGTGAGCGAGCCTCAGACAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS TCA 72 bp | TCTTTCCGGTTGACTGGAATCCATCTTCGACTTGTCTaGGGCTCGCTCACTTTCAGCAGGATCCTGGAAACA | + |
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Preference number: 6 (lower is better) Translates to: SFRLTGIHLRLV*GSLTFSRILET Trigger: TGTTTCCAGGATCCTGCTGAAAGTGAGCGAGCCTCAGACAAGTCGAAGATGGATTCCAGTCAACCGGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS TCA 72 bp | CTCTGTCTTCGAGGTCTTCTAGAAGATCTTTCCGGTTaGCTGGAATCCATCTTCGACTTGTCTGAGGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: LCLRGLLEDLSG*LESIFDLSEAR Trigger: GCGAGCCTCAGACAAGTCGAAGATGGATTCCAGTCAACCGGAAAGATCTTCTAGAAGACCTCGAAGACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS CAA 72 bp | CTTTCGGTGGTTGATCATCACAGTCGTCAATCCCGTTaGTCATGTGACATAAGTCACGGCTCTCACTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LSVVDHHSRQSR*SCDISHGSHWS Trigger: GGACCAGTGAGAGCCGTGACTTATGTCACATGACAAACGGGATTGACGACTGTGATGATCAACCACCGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS CAA 90 bp | ATCTCTTTTCTTTCGGTGGTTGATCATCACAGTCGTCAATCCCGTTaGTCATGTGACATAAGTCACGGCTCTCACTGGTCCTCTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ISFLSVVDHHSRQSR*SCDISHGSHWSSVF Trigger: GAAGACAGAGGACCAGTGAGAGCCGTGACTTATGTCACATGACAAACGGGATTGACGACTGTGATGATCAACCACCGAAAGAAAAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS CAA 72 bp | CTTCTTGGCGGACTTGGATCTCTTTTCTTTCGGTGGTaGATCATCACAGTCGTCAATCCCGTTTGTCATGTG | + |
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Preference number: 6 (lower is better) Translates to: LLGGLGSLFFRW*IITVVNPVCHV Trigger: CACATGACAAACGGGATTGACGACTGTGATGATCAACCACCGAAAGAAAAGAGATCCAAGTCCGCCAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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| CDS CCA 72 bp | CTTCTTCTTGGCGGACTTGGATCTCTTTTCTTTCGGTaGTTGATCATCACAGTCGTCAATCCCGTTTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: LLLGGLGSLFFR*LIITVVNPVCH Trigger: ATGACAAACGGGATTGACGACTGTGATGATCAACCACCGAAAGAAAAGAGATCCAAGTCCGCCAAGAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080353.3 |
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