Pregenerated sensors for ING1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045969Ensembl transcript IDs: ENSMUST00000054399.6, ENSMUST00000209565.2, ENSMUST00000209646.2, ENSMUST00000210041.2, ENSMUST00000210740.2, ENSMUST00000211007.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCCGAGGAGAGGAGGCACGGCTAACATTCTCTAAAATACTCATCTaGCTGCCCTCGGACTTCCACGAAGGCAGCGATACCATAAACACA | + |
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Preference number: 1 (lower is better) Translates to: IRGEEARLTFSKILI*LPSDFHEGSDTINT Trigger: TGTGTTTATGGTATCGCTGCCTTCGTGGAAGTCCGAGGGCAGTCAGATGAGTATTTTAGAGAATGTTAGCCGTGCCTCCTCTCCTCGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| 3UTR GCA 90 bp | TTATTTCTTGACGCAACATCTATACAGCTCACACACGCAGCAGGATaGACACCTTGGCTTCATAACAGCACCAGGCTGCACTTCCGGTTA | + |
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Preference number: 1 (lower is better) Translates to: LFLDATSIQLTHAAG*TPWLHNSTRLHFRL Trigger: TAACCGGAAGTGCAGCCTGGTGCTGTTATGAAGCCAAGGTGTGCATCCTGCTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAGAAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| 3UTR TCA 90 bp | TGCACACCTTGGCTTCATAACAGCACCAGGCTGCACTTCCGGTTATaGTACAGCAGGGGCAAGATGTACATTTATACACTTCATATAAGT | + |
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Preference number: 1 (lower is better) Translates to: CTPWLHNSTRLHFRL*YSRGKMYIYTLHIS Trigger: ACTTATATGAAGTGTATAAATGTACATCTTGCCCCTGCTGTATCATAACCGGAAGTGCAGCCTGGTGCTGTTATGAAGCCAAGGTGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAGACCCAGTCTGGGAACAAGGTACACCATGAAGACGCAGGCTGTCTCCGCCTGGTGGCTGTGTCACTaGCCACGGGTGAGTGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: CRPSLGTRYTMKTQAVSAWWLCH*PRVSVH Trigger: GTGGACACTCACCCGTGGTCAGTGACACAGCCACCA...GGCGGAGACAGCCTGCGTCTTCATGGTGTACCTTGTTCCCAGACTGGGTCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCTTGACGCAACATCTATACAGCTCACACACGCAGCAGGATGCACACCTTGGTGGTGGCTGTGTCACTaGCCACGGGTGAGTGTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: FLDATSIQLTHAAGCTPWWWLCH*PRVSVH Trigger: GTGGACACTCACCCGTGGTCAGTGACACAGCCACCA...CCAAGGTGTGCATCCTGCTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCCAAGTTTCATTTATTTCTTGACGCAACATCTATACAGCTCACACACGCAGTGGTGGCTGTGTCACTaGCCACGGGTGAGTGTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: WPSFIYFLTQHLYSSHTQWWLCH*PRVSVH Trigger: GTGGACACTCACCCGTGGTCAGTGACACAGCCACCA...CTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAGAAATAAATGAAACTTGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGACGCAACATCTATACAGCTCACACACGCAGCAGGATGCACACCTTGGCTTTCTAAAATACTCATCTaGCTGCCCTCGGACTTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LDATSIQLTHAAGCTPWLSKILI*LPSDFH Trigger: GTGGAAGTCCGAGGGCAGTCAGATGAGTATTTTAGA...AAGCCAAGGTGTGCATCCTGCTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAACAAACTGGCCAAGTTTCATTTATTTCTTGACGCAACATCTATACAGCTCACACACGCAGCAGGATaGACACCTTGGCTTCATAAC | + |
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Preference number: 2 (lower is better) Translates to: RNKLAKFHLFLDATSIQLTHAAG*TPWLHN Trigger: GTTATGAAGCCAAGGTGTGCATCCTGCTGCGTGTGT...GAGCTGTATAGATGTTGCGTCAAGAAATAAATGAAACTTGGCCAGTTTGTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAAAATGTACCCAGTCATTAAAAATGGCCAGTTAGGGAATAGGCCATGTATATCTAAAATACTCATCTaGCTGCCCTCGGACTTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LKMYPVIKNGQLGNRPCISKILI*LPSDFH Trigger: GTGGAAGTCCGAGGGCAGTCAGATGAGTATTTTAGA...TATACATGGCCTATTCCCTAACTGGCCATTTTTAATGACTGGGTACATTTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| 3UTR TCA 72 bp | GGCTCTGCAGACCCAGTCTGGGAACAAGGTACACCATaGAGACGCAGGCTGTCTCCGCCATCCGAGGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSADPVWEQGTP*RRRLSPPSEER Trigger: CCTCTCCTCGGATGGCGGAGACAGCCTGCGTCTTCATGGTGTACCTTGTTCCCAGACTGGGTCTGCAGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| 3UTR GCA 72 bp | GACGCAACATCTATACAGCTCACACACGCAGCAGGATaGACACCTTGGCTTCATAACAGCACCAGGCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: DATSIQLTHAAG*TPWLHNSTRLH Trigger: GTGCAGCCTGGTGCTGTTATGAAGCCAAGGTGTGCATCCTGCTGCGTGTGTGAGCTGTATAGATGTTGCGTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| 3UTR TCA 72 bp | GAGGAGGCACGGCTAACATTCTCTAAAATACTCATCTaGCTGCCCTCGGACTTCCACGAAGGCAGCGATACC | + |
|
Preference number: 3 (lower is better) Translates to: EEARLTFSKILI*LPSDFHEGSDT Trigger: GGTATCGCTGCCTTCGTGGAAGTCCGAGGGCAGTCAGATGAGTATTTTAGAGAATGTTAGCCGTGCCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| 3UTR CCA 72 bp | TCTATACAGCTCACACACGCAGCAGGATGCACACCTTaGCTTCATAACAGCACCAGGCTGCACTTCCGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: SIQLTHAAGCTP*LHNSTRLHFRL Trigger: TAACCGGAAGTGCAGCCTGGTGCTGTTATGAAGCCAAGGTGTGCATCCTGCTGCGTGTGTGAGCTGTATAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCTTGACGCAACATCTATACAGCTCACACACGCAGCAGGATGCACACCTTGGCAAGAAGCACGCTTGTaGTACTTCAGCAACCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: FLDATSIQLTHAAGCTPWQEARL*YFSNLA Trigger: AGCCAGGTTGCTGAAGTACAACAAGCGTGCTTCTTG...CCAAGGTGTGCATCCTGCTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| 3UTR TCA 72 bp | TGGCTTCATAACAGCACCAGGCTGCACTTCCGGTTATaGTACAGCAGGGGCAAGATGTACATTTATACACTT | + |
|
Preference number: 3 (lower is better) Translates to: WLHNSTRLHFRL*YSRGKMYIYTL Trigger: AAGTGTATAAATGTACATCTTGCCCCTGCTGTATCATAACCGGAAGTGCAGCCTGGTGCTGTTATGAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| 3UTR TCA 72 bp | TTATACACTTCATATAAGTTAAAGGTGGCTACACCATaGCCTAGGGTAGCAAAGGCAAGACTCGGACCCACT | + |
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Preference number: 3 (lower is better) Translates to: LYTSYKLKVATP*PRVAKARLGPT Trigger: AGTGGGTCCGAGTCTTGCCTTTGCTACCCTAGGTCATGGTGTAGCCACCTTTAACTTATATGAAGTGTATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAACAAACTGGCCAAGTTTCATTTATTTCTTGACGCAACATCTATACAGCTCCAAGAAGCACGCTTGTaGTACTTCAGCAACCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: RNKLAKFHLFLDATSIQLQEARL*YFSNLA Trigger: AGCCAGGTTGCTGAAGTACAACAAGCGTGCTTCTTG...GAGCTGTATAGATGTTGCGTCAAGAAATAAATGAAACTTGGCCAGTTTGTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| 3UTR TCA 72 bp | CTAAAGAAACAAACTGGCCAAGTTTCATTTATTTCTTaGCGCAACATCTATACAGCTCACACACGCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LKKQTGQVSFIS*RNIYTAHTRSR Trigger: CCTGCTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAGAAATAAATGAAACTTGGCCAGTTTGTTTCTTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR CCA 90 bp | TGCAGACCCAGTCTGGGAACAAGGTACACCATGAAGACGCAGGCTGTCTCCGCCGCTCGTTGGGGTCGATaGGAAGGTCGGCAGGAGACG | + |
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Preference number: 4 (lower is better) Translates to: CRPSLGTRYTMKTQAVSAARWGR*EGRQET Trigger: CGTCTCCTGCCGACCTTCCCATCGACCCCAACGAGC...GGCGGAGACAGCCTGCGTCTTCATGGTGTACCTTGTTCCCAGACTGGGTCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR CCA 90 bp | GCTCTGCAGACCCAGTCTGGGAACAAGGTACACCATGAAGACGCAGGCTGTCTCGCTCGTTGGGGTCGATaGGAAGGTCGGCAGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: ALQTQSGNKVHHEDAGCLARWGR*EGRQET Trigger: CGTCTCCTGCCGACCTTCCCATCGACCCCAACGAGC...GAGACAGCCTGCGTCTTCATGGTGTACCTTGTTCCCAGACTGGGTCTGCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR CCA 90 bp | TGCAGACCCAGTCTGGGAACAAGGTACACCATGAAGACGCAGGCTGTCTCCGCCCCAGGGCTTTGTCCATaGTCTTCTCGCTCTCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: CRPSLGTRYTMKTQAVSAPGLCP*SSRSPH Trigger: GTGGGGAGAGCGAGAAGACCATGGACAAAGCCCTGG...GGCGGAGACAGCCTGCGTCTTCATGGTGTACCTTGTTCCCAGACTGGGTCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR TCA 90 bp | CCACGAAGGCAGCGATACCATAAACACACTGGTGGCTGTGTCACTGACCACGGGTCGAAGAGCTCCACGTaGCTGTCCACCTGTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PRRQRYHKHTGGCVTDHGSKSST*LSTCLL Trigger: CAGCAGACAGGTGGACAGTCACGTGGAGCTCTTCGA...CCCGTGGTCAGTGACACAGCCACCAGTGTGTTTATGGTATCGCTGCCTTCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR CCA 90 bp | GGACTTCCACGAAGGCAGCGATACCATAAACACACTGGTGGCTGTGTCACTGACGCTCGTTGGGGTCGATaGGAAGGTCGGCAGGAGACG | + |
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Preference number: 4 (lower is better) Translates to: GLPRRQRYHKHTGGCVTDARWGR*EGRQET Trigger: CGTCTCCTGCCGACCTTCCCATCGACCCCAACGAGC...GTCAGTGACACAGCCACCAGTGTGTTTATGGTATCGCTGCCTTCGTGGAAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR CCA 90 bp | AGTCTGGGAACAAGGTACACCATGAAGACGCAGGCTGTCTCCGCCATCCGAGGATGCACAGACAGTACGTaGGCTCGTTGGGGTCGATGG | + |
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Preference number: 4 (lower is better) Translates to: SLGTRYTMKTQAVSAIRGCTDST*ARWGRW Trigger: CCATCGACCCCAACGAGCCCACGTACTGTCTGTGCA...TCCTCGGATGGCGGAGACAGCCTGCGTCTTCATGGTGTACCTTGTTCCCAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR CCA 90 bp | CTTGACGCAACATCTATACAGCTCACACACGCAGCAGGATGCACACCTTGGCTTGCTCGTTGGGGTCGATaGGAAGGTCGGCAGGAGACG | + |
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Preference number: 4 (lower is better) Translates to: LDATSIQLTHAAGCTPWLARWGR*EGRQET Trigger: CGTCTCCTGCCGACCTTCCCATCGACCCCAACGAGC...AAGCCAAGGTGTGCATCCTGCTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR TCA 90 bp | AGTCTGGGAACAAGGTACACCATGAAGACGCAGGCTGTCTCCGCCATCCGAGGACCTTTGGTTTATGGTTaGGCCCCACGCAGGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: SLGTRYTMKTQAVSAIRGPLVYG*APRRRS Trigger: ACTTCTCCTGCGTGGGGCTCAACCATAAACCAAAGG...TCCTCGGATGGCGGAGACAGCCTGCGTCTTCATGGTGTACCTTGTTCCCAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR TCA 90 bp | CCACGAAGGCAGCGATACCATAAACACACTGGTGGCTGTGTCACTGACCACGGGCCTTTGGTTTATGGTTaGGCCCCACGCAGGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: PRRQRYHKHTGGCVTDHGPLVYG*APRRRS Trigger: ACTTCTCCTGCGTGGGGCTCAACCATAAACCAAAGG...CCCGTGGTCAGTGACACAGCCACCAGTGTGTTTATGGTATCGCTGCCTTCGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR CCA 90 bp | GGACTTCCACGAAGGCAGCGATACCATAAACACACTGGTGGCTGTGTCACTGACTGCACAGACAGTACGTaGGCTCGTTGGGGTCGATGG | + |
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Preference number: 4 (lower is better) Translates to: GLPRRQRYHKHTGGCVTDCTDST*ARWGRW Trigger: CCATCGACCCCAACGAGCCCACGTACTGTCTGTGCA...GTCAGTGACACAGCCACCAGTGTGTTTATGGTATCGCTGCCTTCGTGGAAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR TCA 90 bp | CTTGACGCAACATCTATACAGCTCACACACGCAGCAGGATGCACACCTTGGCTTTCGAAGAGCTCCACGTaGCTGTCCACCTGTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LDATSIQLTHAAGCTPWLSKSST*LSTCLL Trigger: CAGCAGACAGGTGGACAGTCACGTGGAGCTCTTCGA...AAGCCAAGGTGTGCATCCTGCTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR CCA 90 bp | CTTGACGCAACATCTATACAGCTCACACACGCAGCAGGATGCACACCTTGGCTTCCAGGGCTTTGTCCATaGTCTTCTCGCTCTCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LDATSIQLTHAAGCTPWLPGLCP*SSRSPH Trigger: GTGGGGAGAGCGAGAAGACCATGGACAAAGCCCTGG...AAGCCAAGGTGTGCATCCTGCTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR CCA 90 bp | TGCAGACCCAGTCTGGGAACAAGGTACACCATGAAGACGCAGGCTGTCTCCGCCAAGCCCTCTCTTTCTTaGACTTCTCCAGGGCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: CRPSLGTRYTMKTQAVSAKPSLS*TSPGLC Trigger: ACAAAGCCCTGGAGAAGTCCAAGAAAGAGAGGGCTT...GGCGGAGACAGCCTGCGTCTTCATGGTGTACCTTGTTCCCAGACTGGGTCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR TCA 90 bp | GGACTTCCACGAAGGCAGCGATACCATAAACACACTGGTGGCTGTGTCACTGACCCTTTGGTTTATGGTTaGGCCCCACGCAGGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: GLPRRQRYHKHTGGCVTDPLVYG*APRRRS Trigger: ACTTCTCCTGCGTGGGGCTCAACCATAAACCAAAGG...GTCAGTGACACAGCCACCAGTGTGTTTATGGTATCGCTGCCTTCGTGGAAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR GCA 90 bp | GGACTTCCACGAAGGCAGCGATACCATAAACACACTGGTGGCTGTGTCACTGACAGACGCTTCCCTCTCTaGTTTGGCCTTGGAGCGTTT | + |
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Preference number: 4 (lower is better) Translates to: GLPRRQRYHKHTGGCVTDRRFPL*FGLGAF Trigger: AAACGCTCCAAGGCCAAAGCAGAGAGGGAAGCGTCT...GTCAGTGACACAGCCACCAGTGTGTTTATGGTATCGCTGCCTTCGTGGAAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR CCA 90 bp | CACGAAGGCAGCGATACCATAAACACACTGGTGGCTGTGTCACTGACCACGGGTGGATCTCTTGGTATTTaGCGTCGATCTCCCGCATCA | + |
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Preference number: 4 (lower is better) Translates to: HEGSDTINTLVAVSLTTGGSLGI*RRSPAS Trigger: TGATGCGGGAGATCGACGCCAAATACCAAGAGATCC...ACCCGTGGTCAGTGACACAGCCACCAGTGTGTTTATGGTATCGCTGCCTTCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054399.6 |
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| CDS-3UTR CCA 90 bp | CCACGAAGGCAGCGATACCATAAACACACTGGTGGCTGTGTCACTGACCACGGGAAGCCCTCTCTTTCTTaGACTTCTCCAGGGCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: PRRQRYHKHTGGCVTDHGKPSLS*TSPGLC Trigger: ACAAAGCCCTGGAGAAGTCCAAGAAAGAGAGGGCTT...CCCGTGGTCAGTGACACAGCCACCAGTGTGTTTATGGTATCGCTGCCTTCGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR GCA 90 bp | CTTGACGCAACATCTATACAGCTCACACACGCAGCAGGATGCACACCTTGGCTTAGACGCTTCCCTCTCTaGTTTGGCCTTGGAGCGTTT | + |
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Preference number: 4 (lower is better) Translates to: LDATSIQLTHAAGCTPWLRRFPL*FGLGAF Trigger: AAACGCTCCAAGGCCAAAGCAGAGAGGGAAGCGTCT...AAGCCAAGGTGTGCATCCTGCTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR GCA 90 bp | TGGCCAAGTTTCATTTATTTCTTGACGCAACATCTATACAGCTCACACACGCAGGCCCTCTGGATGCAGTaGAGTACCCGGCGCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: WPSFIYFLTQHLYSSHTQALWMQ*STRRFW Trigger: CCAGAAGCGCCGGGTACTGCACTGCATCCAGAGGGC...CTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAGAAATAAATGAAACTTGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054399.6 |
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| CDS-3UTR CCA 90 bp | GGACTTCCACGAAGGCAGCGATACCATAAACACACTGGTGGCTGTGTCACTGACAAGCCCTCTCTTTCTTaGACTTCTCCAGGGCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: GLPRRQRYHKHTGGCVTDKPSLS*TSPGLC Trigger: ACAAAGCCCTGGAGAAGTCCAAGAAAGAGAGGGCTT...GTCAGTGACACAGCCACCAGTGTGTTTATGGTATCGCTGCCTTCGTGGAAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR CCA 90 bp | AGACCACCAACTTGTCGTGTGGATATACATTATGGTAGCAAGAAGCACGCTTGTCCAGGGCTTTGTCCATaGTCTTCTCGCTCTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RPPTCRVDIHYGSKKHACPGLCP*SSRSPH Trigger: GTGGGGAGAGCGAGAAGACCATGGACAAAGCCCTGG...ACAAGCGTGCTTCTTGCTACCATAATGTATATCCACACGACAAGTTGGTGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR GCA 90 bp | AGACCACCAACTTGTCGTGTGGATATACATTATGGTAGCAAGAAGCACGCTTGTAGCGAGACGTTCCTCTaGAGGTCGAAAGGCAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RPPTCRVDIHYGSKKHACSETFL*RSKGSD Trigger: GTCACTGCCTTTCGACCTGCAGAGGAACGTCTCGCT...ACAAGCGTGCTTCTTGCTACCATAATGTATATCCACACGACAAGTTGGTGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054399.6 |
||
| CDS-3UTR GCA 90 bp | TTTCTTGACGCAACATCTATACAGCTCACACACGCAGCAGGATGCACACCTTGGGTTATTCGGCTTATCTaGCTGTGTGATGGCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: FLDATSIQLTHAAGCTPWVIRLI*LCDGLT Trigger: AGTGAGGCCATCACACAGGCAGATAAGCCGAATAAC...CCAAGGTGTGCATCCTGCTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR TCA 90 bp | TTAGACTTTAGACCACCAACTTGTCGTGTGGATATACATTATGGTAGCAAGAAGTCGAAGAGCTCCACGTaGCTGTCCACCTGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LDFRPPTCRVDIHYGSKKSKSST*LSTCLL Trigger: CAGCAGACAGGTGGACAGTCACGTGGAGCTCTTCGA...CTTCTTGCTACCATAATGTATATCCACACGACAAGTTGGTGGTCTAAAGTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCAAGTTTCATTTATTTCTTGACGCAACATCTATACAGCTCACACACGCAGAGACGCTTCCCTCTCTaGTTTGGCCTTGGAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WPSFIYFLTQHLYSSHTQRRFPL*FGLGAF Trigger: AAACGCTCCAAGGCCAAAGCAGAGAGGGAAGCGTCT...CTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAGAAATAAATGAAACTTGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CCA 90 bp | TTAGACTTTAGACCACCAACTTGTCGTGTGGATATACATTATGGTAGCAAGAAGTGCACAGACAGTACGTaGGCTCGTTGGGGTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LDFRPPTCRVDIHYGSKKCTDST*ARWGRW Trigger: CCATCGACCCCAACGAGCCCACGTACTGTCTGTGCA...CTTCTTGCTACCATAATGTATATCCACACGACAAGTTGGTGGTCTAAAGTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR TCA 90 bp | CCACTTGTGTCTGACCTATTAAAAATGTACCCAGTCATTAAAAATGGCCAGTTATCGAAGAGCTCCACGTaGCTGTCCACCTGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLVSDLLKMYPVIKNGQLSKSST*LSTCLL Trigger: CAGCAGACAGGTGGACAGTCACGTGGAGCTCTTCGA...TAACTGGCCATTTTTAATGACTGGGTACATTTTTAATAGGTCAGACACAAGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR GCA 90 bp | CCACTTGTGTCTGACCTATTAAAAATGTACCCAGTCATTAAAAATGGCCAGTTATTCACCAGGTGGATCTaGTCCCCGTTGGCAGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: PLVSDLLKMYPVIKNGQLFTRWI*SPLAGL Trigger: GAGTCCTGCCAACGGGGAGCAGATCCACCTGGTGAA...TAACTGGCCATTTTTAATGACTGGGTACATTTTTAATAGGTCAGACACAAGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000054399.6 |
||
| CDS-3UTR CCA 90 bp | AGAAACAAACTGGCCAAGTTTCATTTATTTCTTGACGCAACATCTATACAGCTCTGCACAGACAGTACGTaGGCTCGTTGGGGTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: RNKLAKFHLFLDATSIQLCTDST*ARWGRW Trigger: CCATCGACCCCAACGAGCCCACGTACTGTCTGTGCA...GAGCTGTATAGATGTTGCGTCAAGAAATAAATGAAACTTGGCCAGTTTGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACAAACTGGCCAAGTTTCATTTATTTCTTGACGCAACATCTATACAGCTCCCAGGGCTTTGTCCATaGTCTTCTCGCTCTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RNKLAKFHLFLDATSIQLPGLCP*SSRSPH Trigger: GTGGGGAGAGCGAGAAGACCATGGACAAAGCCCTGG...GAGCTGTATAGATGTTGCGTCAAGAAATAAATGAAACTTGGCCAGTTTGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR TCA 90 bp | TTAAAAATGTACCCAGTCATTAAAAATGGCCAGTTAGGGAATAGGCCATGTATATCGAAGAGCTCCACGTaGCTGTCCACCTGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKMYPVIKNGQLGNRPCISKSST*LSTCLL Trigger: CAGCAGACAGGTGGACAGTCACGTGGAGCTCTTCGA...TATACATGGCCTATTCCCTAACTGGCCATTTTTAATGACTGGGTACATTTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCAAGTTTCATTTATTTCTTGACGCAACATCTATACAGCTCACACACGCAGGTTATTCGGCTTATCTaGCTGTGTGATGGCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: WPSFIYFLTQHLYSSHTQVIRLI*LCDGLT Trigger: AGTGAGGCCATCACACAGGCAGATAAGCCGAATAAC...CTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAGAAATAAATGAAACTTGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCAAGTTTCATTTATTTCTTGACGCAACATCTATACAGCTCACACACGCAGAAGCCCTCTCTTTCTTaGACTTCTCCAGGGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: WPSFIYFLTQHLYSSHTQKPSLS*TSPGLC Trigger: ACAAAGCCCTGGAGAAGTCCAAGAAAGAGAGGGCTT...CTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAGAAATAAATGAAACTTGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR TCA 90 bp | AGAAACAAACTGGCCAAGTTTCATTTATTTCTTGACGCAACATCTATACAGCTCCCTTTGGTTTATGGTTaGGCCCCACGCAGGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RNKLAKFHLFLDATSIQLPLVYG*APRRRS Trigger: ACTTCTCCTGCGTGGGGCTCAACCATAAACCAAAGG...GAGCTGTATAGATGTTGCGTCAAGAAATAAATGAAACTTGGCCAGTTTGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR GCA 90 bp | AGAAACAAACTGGCCAAGTTTCATTTATTTCTTGACGCAACATCTATACAGCTCAGACGCTTCCCTCTCTaGTTTGGCCTTGGAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RNKLAKFHLFLDATSIQLRRFPL*FGLGAF Trigger: AAACGCTCCAAGGCCAAAGCAGAGAGGGAAGCGTCT...GAGCTGTATAGATGTTGCGTCAAGAAATAAATGAAACTTGGCCAGTTTGTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR TCA 90 bp | TTAAAAATGTACCCAGTCATTAAAAATGGCCAGTTAGGGAATAGGCCATGTATACCTTTGGTTTATGGTTaGGCCCCACGCAGGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LKMYPVIKNGQLGNRPCIPLVYG*APRRRS Trigger: ACTTCTCCTGCGTGGGGCTCAACCATAAACCAAAGG...TATACATGGCCTATTCCCTAACTGGCCATTTTTAATGACTGGGTACATTTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR GCA 90 bp | TTAAAAATGTACCCAGTCATTAAAAATGGCCAGTTAGGGAATAGGCCATGTATAAGACGCTTCCCTCTCTaGTTTGGCCTTGGAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKMYPVIKNGQLGNRPCIRRFPL*FGLGAF Trigger: AAACGCTCCAAGGCCAAAGCAGAGAGGGAAGCGTCT...TATACATGGCCTATTCCCTAACTGGCCATTTTTAATGACTGGGTACATTTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| 3UTR CAA 72 bp | GCTAAAGAAACAAACTGGCCAAGTTTCATTTATTTCTaGACGCAACATCTATACAGCTCACACACGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AKETNWPSFIYF*TQHLYSSHTQQ Trigger: CTGCTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAGAAATAAATGAAACTTGGCCAGTTTGTTTCTTTAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS TCA 90 bp | TCGACTTGTCCTGGCCCGCCTTGCCGCTGCCACCAGTGCCGTCACTaGTGTCCTGGTGTGCTTCGAAGAGCTCCACGTGACTGTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: STCPGPPCRCHQCRH*CPGVLRRAPRDCPP Trigger: AGGTGGACAGTCACGTGGAGCTCTTCGAAGCACACCAGGACATCAGTGACGGCACTGGTGGCAGCGGCAAGGCGGGCCAGGACAAGTCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000209646.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CAA 90 bp | CCACGAAGGCAGCGATACCATAAACACACTGGTGGCTGTGTCACTGACCACGGGCTCTCCCCACGGCACTaGGGGCAGTACCACTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PRRQRYHKHTGGCVTDHGLSPRH*GQYHLP Trigger: GGGCAAGTGGTACTGCCCCAAGTGCCGTGGGGAGAG...CCCGTGGTCAGTGACACAGCCACCAGTGTGTTTATGGTATCGCTGCCTTCGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS TCA 90 bp | TTCGCTGCCTCCTGGACCGCTTGTTATTCGGCTTATCTGCCTGTGTaGTGGCCTCACTCTTCGACTTGTCCTGGCCCGCCTTGCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FAASWTACYSAYLPV*WPHSSTCPGPPCRC Trigger: GCAGCGGCAAGGCGGGCCAGGACAAGTCGAAGAGTGAGGCCATCACACAGGCAGATAAGCCGAATAACAAGCGGTCCAGGAGGCAGCGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000209646.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGACCCAGTCTGGGAACAAGGTACACCATGAAGACGCAGGCTGTCTCCGCCGCTTCCCTCTCTGCTTaGGCCTTGGAGCGTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CRPSLGTRYTMKTQAVSAASLSA*ALERFF Trigger: GAAGAAACGCTCCAAGGCCAAAGCAGAGAGGGAAGC...GGCGGAGACAGCCTGCGTCTTCATGGTGTACCTTGTTCCCAGACTGGGTCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGACCCAGTCTGGGAACAAGGTACACCATGAAGACGCAGGCTGTCTCCGCCATGGGGCATTCGTCGTaGTCACAGCCGATCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CRPSLGTRYTMKTQAVSAMGHSS*SQPIIS Trigger: GGAGATGATCGGCTGTGACAACGACGAATGCCCCAT...GGCGGAGACAGCCTGCGTCTTCATGGTGTACCTTGTTCCCAGACTGGGTCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTGCAGACCCAGTCTGGGAACAAGGTACACCATGAAGACGCAGGCTGTCTCGCTTCCCTCTCTGCTTaGGCCTTGGAGCGTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ALQTQSGNKVHHEDAGCLASLSA*ALERFF Trigger: GAAGAAACGCTCCAAGGCCAAAGCAGAGAGGGAAGC...GAGACAGCCTGCGTCTTCATGGTGTACCTTGTTCCCAGACTGGGTCTGCAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CAA 90 bp | CCACGAAGGCAGCGATACCATAAACACACTGGTGGCTGTGTCACTGACCACGGGGCTTCCCTCTCTGCTTaGGCCTTGGAGCGTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PRRQRYHKHTGGCVTDHGASLSA*ALERFF Trigger: GAAGAAACGCTCCAAGGCCAAAGCAGAGAGGGAAGC...CCCGTGGTCAGTGACACAGCCACCAGTGTGTTTATGGTATCGCTGCCTTCGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CAA 90 bp | AGTCTGGGAACAAGGTACACCATGAAGACGCAGGCTGTCTCCGCCATCCGAGGAATGGGGCATTCGTCGTaGTCACAGCCGATCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLGTRYTMKTQAVSAIRGMGHSS*SQPIIS Trigger: GGAGATGATCGGCTGTGACAACGACGAATGCCCCAT...TCCTCGGATGGCGGAGACAGCCTGCGTCTTCATGGTGTACCTTGTTCCCAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CAA 90 bp | CCACGAAGGCAGCGATACCATAAACACACTGGTGGCTGTGTCACTGACCACGGGATGGGGCATTCGTCGTaGTCACAGCCGATCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRRQRYHKHTGGCVTDHGMGHSS*SQPIIS Trigger: GGAGATGATCGGCTGTGACAACGACGAATGCCCCAT...CCCGTGGTCAGTGACACAGCCACCAGTGTGTTTATGGTATCGCTGCCTTCGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTTGACGCAACATCTATACAGCTCACACACGCAGCAGGATGCACACCTTGGCTCTCCCCACGGCACTaGGGGCAGTACCACTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FLDATSIQLTHAAGCTPWLSPRH*GQYHLP Trigger: GGGCAAGTGGTACTGCCCCAAGTGCCGTGGGGAGAG...CCAAGGTGTGCATCCTGCTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CAA 90 bp | CCACGAAGGCAGCGATACCATAAACACACTGGTGGCTGTGTCACTGACCACGGGGACTTCTCCAGGGCTTaGTCCATGGTCTTCTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PRRQRYHKHTGGCVTDHGDFSRA*SMVFSL Trigger: GAGCGAGAAGACCATGGACAAAGCCCTGGAGAAGTC...CCCGTGGTCAGTGACACAGCCACCAGTGTGTTTATGGTATCGCTGCCTTCGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGACCCAGTCTGGGAACAAGGTACACCATGAAGACGCAGGCTGTCTCCGCCTTTGCTTTCTTCTCCTaGGGCGTTCCTGAGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: CRPSLGTRYTMKTQAVSAFAFFS*GVPEVM Trigger: CATCACCTCAGGAACGCCCAAGGAGAAGAAAGCAAA...GGCGGAGACAGCCTGCGTCTTCATGGTGTACCTTGTTCCCAGACTGGGTCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CAA 90 bp | CACGAAGGCAGCGATACCATAAACACACTGGTGGCTGTGTCACTGACCACGGGTGCTTCCCTCTCTGCTTaGGCCTTGGAGCGTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HEGSDTINTLVAVSLTTGASLSA*ALERFF Trigger: GAAGAAACGCTCCAAGGCCAAAGCAGAGAGGGAAGC...ACCCGTGGTCAGTGACACAGCCACCAGTGTGTTTATGGTATCGCTGCCTTCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTGCAGACCCAGTCTGGGAACAAGGTACACCATGAAGACGCAGGCTGTCTCTTCTCTCGATTCTCATaGTTTCGCTGCCTCCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ALQTQSGNKVHHEDAGCLFSRFS*FRCLLD Trigger: GTCCAGGAGGCAGCGAAACAATGAGAATCGAGAGAA...GAGACAGCCTGCGTCTTCATGGTGTACCTTGTTCCCAGACTGGGTCTGCAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CAA 90 bp | CCACGAAGGCAGCGATACCATAAACACACTGGTGGCTGTGTCACTGACCACGGGTTTGCTTTCTTCTCCTaGGGCGTTCCTGAGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PRRQRYHKHTGGCVTDHGFAFFS*GVPEVM Trigger: CATCACCTCAGGAACGCCCAAGGAGAAGAAAGCAAA...CCCGTGGTCAGTGACACAGCCACCAGTGTGTTTATGGTATCGCTGCCTTCGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CAA 90 bp | GGACTTCCACGAAGGCAGCGATACCATAAACACACTGGTGGCTGTGTCACTGACGACTTCTCCAGGGCTTaGTCCATGGTCTTCTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLPRRQRYHKHTGGCVTDDFSRA*SMVFSL Trigger: GAGCGAGAAGACCATGGACAAAGCCCTGGAGAAGTC...GTCAGTGACACAGCCACCAGTGTGTTTATGGTATCGCTGCCTTCGTGGAAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CAA 90 bp | GGACTTCCACGAAGGCAGCGATACCATAAACACACTGGTGGCTGTGTCACTGACTTTGCTTTCTTCTCCTaGGGCGTTCCTGAGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GLPRRQRYHKHTGGCVTDFAFFS*GVPEVM Trigger: CATCACCTCAGGAACGCCCAAGGAGAAGAAAGCAAA...GTCAGTGACACAGCCACCAGTGTGTTTATGGTATCGCTGCCTTCGTGGAAGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCAAGTTTCATTTATTTCTTGACGCAACATCTATACAGCTCACACACGCAGCTCTCCCCACGGCACTaGGGGCAGTACCACTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WPSFIYFLTQHLYSSHTQLSPRH*GQYHLP Trigger: GGGCAAGTGGTACTGCCCCAAGTGCCGTGGGGAGAG...CTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAGAAATAAATGAAACTTGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
||
| CDS-3UTR CAA 90 bp | CTTGACGCAACATCTATACAGCTCACACACGCAGCAGGATGCACACCTTGGCTTTTCTCTCGATTCTCATaGTTTCGCTGCCTCCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LDATSIQLTHAAGCTPWLFSRFS*FRCLLD Trigger: GTCCAGGAGGCAGCGAAACAATGAGAATCGAGAGAA...AAGCCAAGGTGTGCATCCTGCTGCGTGTGTGAGCTGTATAGATGTTGCGTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR CAA 90 bp | TTAGACTTTAGACCACCAACTTGTCGTGTGGATATACATTATGGTAGCAAGAAGATGGGGCATTCGTCGTaGTCACAGCCGATCATCTCC | + |
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Preference number: 5 (lower is better) Translates to: LDFRPPTCRVDIHYGSKKMGHSS*SQPIIS Trigger: GGAGATGATCGGCTGTGACAACGACGAATGCCCCAT...CTTCTTGCTACCATAATGTATATCCACACGACAAGTTGGTGGTCTAAAGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR CAA 90 bp | TTAGACTTTAGACCACCAACTTGTCGTGTGGATATACATTATGGTAGCAAGAAGAGGATCTCTTGGTATTaGGCGTCGATCTCCCGCATC | + |
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Preference number: 5 (lower is better) Translates to: LDFRPPTCRVDIHYGSKKRISWY*ASISRI Trigger: GATGCGGGAGATCGACGCCAAATACCAAGAGATCCT...CTTCTTGCTACCATAATGTATATCCACACGACAAGTTGGTGGTCTAAAGTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054399.6 |
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| CDS-3UTR CAA 90 bp | CCACTTGTGTCTGACCTATTAAAAATGTACCCAGTCATTAAAAATGGCCAGTTAGACTTCTCCAGGGCTTaGTCCATGGTCTTCTCGCTC | + |
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Preference number: 5 (lower is better) Translates to: PLVSDLLKMYPVIKNGQLDFSRA*SMVFSL Trigger: GAGCGAGAAGACCATGGACAAAGCCCTGGAGAAGTC...TAACTGGCCATTTTTAATGACTGGGTACATTTTTAATAGGTCAGACACAAGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR CAA 90 bp | TTAGACTTTAGACCACCAACTTGTCGTGTGGATATACATTATGGTAGCAAGAAGTTTGCTTTCTTCTCCTaGGGCGTTCCTGAGGTGATG | + |
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Preference number: 5 (lower is better) Translates to: LDFRPPTCRVDIHYGSKKFAFFS*GVPEVM Trigger: CATCACCTCAGGAACGCCCAAGGAGAAGAAAGCAAA...CTTCTTGCTACCATAATGTATATCCACACGACAAGTTGGTGGTCTAAAGTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR CAA 90 bp | CCACTTGTGTCTGACCTATTAAAAATGTACCCAGTCATTAAAAATGGCCAGTTATTCTCTCGATTCTCATaGTTTCGCTGCCTCCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: PLVSDLLKMYPVIKNGQLFSRFS*FRCLLD Trigger: GTCCAGGAGGCAGCGAAACAATGAGAATCGAGAGAA...TAACTGGCCATTTTTAATGACTGGGTACATTTTTAATAGGTCAGACACAAGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR CAA 90 bp | AGAAACAAACTGGCCAAGTTTCATTTATTTCTTGACGCAACATCTATACAGCTCTTCTCTCGATTCTCATaGTTTCGCTGCCTCCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: RNKLAKFHLFLDATSIQLFSRFS*FRCLLD Trigger: GTCCAGGAGGCAGCGAAACAATGAGAATCGAGAGAA...GAGCTGTATAGATGTTGCGTCAAGAAATAAATGAAACTTGGCCAGTTTGTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS-3UTR CAA 90 bp | CCACTTGTGTCTGACCTATTAAAAATGTACCCAGTCATTAAAAATGGCCAGTTATTTGCTTTCTTCTCCTaGGGCGTTCCTGAGGTGATG | + |
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Preference number: 5 (lower is better) Translates to: PLVSDLLKMYPVIKNGQLFAFFS*GVPEVM Trigger: CATCACCTCAGGAACGCCCAAGGAGAAGAAAGCAAA...TAACTGGCCATTTTTAATGACTGGGTACATTTTTAATAGGTCAGACACAAGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS CAA 72 bp | GGCTTATCTGCCTGTGTGATGGCCTCACTCTTCGACTaGTCCTGGCCCGCCTTGCCGCTGCCACCAGTGCCG | + |
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Preference number: 6 (lower is better) Translates to: GLSACVMASLFD*SWPALPLPPVP Trigger: CGGCACTGGTGGCAGCGGCAAGGCGGGCCAGGACAAGTCGAAGAGTGAGGCCATCACACAGGCAGATAAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000209646.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS GCA 72 bp | GCCGCTGCCACCAGTGCCGTCACTGATGTCCTGGTGTaGTTCGAAGAGCTCCACGTGACTGTCCACCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: AAATSAVTDVLV*FEELHVTVHLS Trigger: AGACAGGTGGACAGTCACGTGGAGCTCTTCGAAGCACACCAGGACATCAGTGACGGCACTGGTGGCAGCGGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000209646.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS GCA 72 bp | TTGGCGTCGATCTCCCGCATCAGCGAGACGTTCCTCTaGAGGTCGAAAGGCAGTGACTCGATTGAGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LASISRISETFL*RSKGSDSIESR Trigger: CCTGGACTCAATCGAGTCACTGCCTTTCGACCTGCAGAGGAACGTCTCGCTGATGCGGGAGATCGACGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054399.6 |
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| CDS GCA 72 bp | TCGCTGCCTCCTGGACCGCTTGTTATTCGGCTTATCTaGCTGTGTGATGGCCTCACTCTTCGACTTGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SLPPGPLVIRLI*LCDGLTLRLVL Trigger: CAGGACAAGTCGAAGAGTGAGGCCATCACACAGGCAGATAAGCCGAATAACAAGCGGTCCAGGAGGCAGCGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000209646.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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| CDS CAA 72 bp | TCTCGATTCTCATTGTTTCGCTGCCTCCTGGACCGCTaGTTATTCGGCTTATCTGCCTGTGTGATGGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SRFSLFRCLLDR*LFGLSACVMAS Trigger: TGAGGCCATCACACAGGCAGATAAGCCGAATAACAAGCGGTCCAGGAGGCAGCGAAACAATGAGAATCGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000054399.6 ENSMUST00000209565.2 ENSMUST00000209646.2 ENSMUST00000210041.2 ENSMUST00000210740.2 ENSMUST00000211007.2 |
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