Pregenerated sensors for INAVA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041605Ensembl transcript IDs: ENSMUST00000120339.8, ENSMUST00000144464.7, ENSMUST00000150163.8, ENSMUST00000153910.2, ENSMUST00000195177.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCGCCGGACCTTGGGGGCCTTCTCACCAGGCTTAAGGGGATACTCTaGCGGCAAAGTCCCAGTCAGCTCCGCCTCCCTCAGGCAGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: APDLGGLLTRLKGIL*RQSPSQLRLPQAES Trigger: AGACTCTGCCTGAGGGAGGCGGAGCTGACTGGGACTTTGCCGGCAGAGTATCCCCTTAAGCCTGGTGAGAAGGCCCCCAAGGTCCGGCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153910.2 |
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| 3UTR TCA 90 bp | ACTGTAGGGTATGGGAAGAACACCATGACAGAAATGCCTGTGCCCTaGAGGGGAGAGGAGAGTTCTGCCCAGCATCTGGGAAACAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: TVGYGKNTMTEMPVP*RGEESSAQHLGNKG Trigger: TCCCTTGTTTCCCAGATGCTGGGCAGAACTCTCCTCTCCCCTTCAGGGCACAGGCATTTCTGTCATGGTGTTCTTCCCATACCCTACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| 3UTR CCA 90 bp | GCCTTAAGAAGCAACAGGTATCTCAGAAAGAGGGCCCAGAGCATATaGGACGTCTCAAGGGGCCCTCTATGCCACTTGTCCTACATAAGG | + |
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Preference number: 1 (lower is better) Translates to: ALRSNRYLRKRAQSI*DVSRGPLCHLSYIR Trigger: CCTTATGTAGGACAAGTGGCATAGAGGGCCCCTTGAGACGTCCCATATGCTCTGGGCCCTCTTTCTGAGATACCTGTTGCTTCTTAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAGCAACAGGTATCTCAGAAAGAGGGCCCAGAGCATATGGGACGTCTCAAGGTCTGCATCATCGGCCTaGGATGAGGGGAGGGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: RSNRYLRKRAQSIWDVSRSASSA*DEGRGD Trigger: ATCTCCCCTCCCCTCATCGCAGGCCGATGATGCAGA...CCTTGAGACGTCCCATATGCTCTGGGCCCTCTTTCTGAGATACCTGTTGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| 3UTR-3UTR GCA 90 bp | TACAATATGGCAAGTGGAGGTTGGGACTACTGTAGGGTATGGGAAGAACACCATGGGAGAGGAGAGTTCTaGCCAGCATCTGGGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: YNMASGGWDYCRVWEEHHGRGEF*PASGKQ Trigger: TTGTTTCCCAGATGCTGGGCAGAACTCTCCTCTCCC...ATGGTGTTCTTCCCATACCCTACAGTAGTCCCAACCTCCACTTGCCATATTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| 3UTR-3UTR CAA 90 bp | GCAAAGTCCCAGTCAGCTCCGCCTCCCTCAGGCAGAGTCTGCGCAGCTCCTCCAAGAGCCCTCTGCTGCTaGCGTACTGCATTGGTCAGC | + |
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Preference number: 3 (lower is better) Translates to: AKSQSAPPPSGRVCAAPPRALCC*RTALVS Trigger: GCTGACCAATGCAGTACGCAAGCAGCAGAGGGCTCT...TGGAGGAGCTGCGCAGACTCTGCCTGAGGGAGGCGGAGCTGACTGGGACTTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153910.2 |
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| 3UTR GCA 72 bp | CTTGGGGGCCTTCTCACCAGGCTTAAGGGGATACTCTaGCGGCAAAGTCCCAGTCAGCTCCGCCTCCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: LGGLLTRLKGIL*RQSPSQLRLPQ Trigger: CTGAGGGAGGCGGAGCTGACTGGGACTTTGCCGGCAGAGTATCCCCTTAAGCCTGGTGAGAAGGCCCCCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153910.2 |
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| 3UTR CCA 72 bp | AGCAACAGGTATCTCAGAAAGAGGGCCCAGAGCATATaGGACGTCTCAAGGGGCCCTCTATGCCACTTGTCC | + |
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Preference number: 3 (lower is better) Translates to: SNRYLRKRAQSI*DVSRGPLCHLS Trigger: GGACAAGTGGCATAGAGGGCCCCTTGAGACGTCCCATATGCTCTGGGCCCTCTTTCTGAGATACCTGTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| 3UTR GCA 72 bp | GCCCAGAGCATATGGGACGTCTCAAGGGGCCCTCTATaGCACTTGTCCTACATAAGGAGACAAATGCTGTCG | + |
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Preference number: 3 (lower is better) Translates to: AQSIWDVSRGPL*HLSYIRRQMLS Trigger: CGACAGCATTTGTCTCCTTATGTAGGACAAGTGGCATAGAGGGCCCCTTGAGACGTCCCATATGCTCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| 3UTR CCA 72 bp | GGGGCTCAGAAGCCATACAATATGGCAAGTGGAGGTTaGGACTACTGTAGGGTATGGGAAGAACACCATGAC | + |
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Preference number: 3 (lower is better) Translates to: GAQKPYNMASGG*DYCRVWEEHHD Trigger: GTCATGGTGTTCTTCCCATACCCTACAGTAGTCCCAACCTCCACTTGCCATATTGTATGGCTTCTGAGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR CCA 90 bp | TCCCAGTCAGCTCCGCCTCCCTCAGGCAGAGTCTGCGCAGCTCCTCCAGGCAGGAGCTTCAGGACCTGTTaGTCCCGCCCATCTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SQSAPPPSGRVCAAPPGRSFRTC*SRPSSL Trigger: GAGGGAAGATGGGCGGGACCAACAGGTCCTGAAGCT...CCTGCCTGGAGGAGCTGCGCAGACTCTGCCTGAGGGAGGCGGAGCTGACTGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153910.2 |
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| CDS-3UTR GCA 90 bp | GCCTGTGCCCTGAAGGGGAGAGGAGAGTTCTGCCCAGCATCTGGGAAACAAGGGCCCTCAGGCAGAGTCTaGGCAGCTCCTCCAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ACALKGRGEFCPASGKQGPSGRV*AAPPGR Trigger: CCTGCCTGGAGGAGCTGCGCAGACTCTGCCTGAGGG...CCCTTGTTTCCCAGATGCTGGGCAGAACTCTCCTCTCCCCTTCAGGGCACAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR GCA 90 bp | CCACATCCGGCCTCCAGCCTTAAGAAGCAACAGGTATCTCAGAAAGAGGGCCCATGGCTGGGGCACTGGTaGGGCCCTGACGCTGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: PHPASSLKKQQVSQKEGPWLGHW*GPDAGR Trigger: CCGGCCAGCGTCAGGGCCGCACCAGTGCCCCAGCCA...TGGGCCCTCTTTCTGAGATACCTGTTGCTTCTTAAGGCTGGAGGCCGGATGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR GCA 90 bp | GCCTGTGCCCTGAAGGGGAGAGGAGAGTTCTGCCCAGCATCTGGGAAACAAGGGGTGACTGGCCCCTCCTaGCCTGCATCTCAGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ACALKGRGEFCPASGKQGVTGPS*PASQGW Trigger: CCACCCCTGAGATGCAGGGCAGGAGGGGCCAGTCAC...CCCTTGTTTCCCAGATGCTGGGCAGAACTCTCCTCTCCCCTTCAGGGCACAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR CCA 90 bp | ATGCTCAGGTGTGGGGAGGCACTAGCACTCAGAAGTCTCTCAGCTCTGTGGCTCCCCCAGGCCCCACGGTaGCGAGGTGGCTCAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: MLRCGEALALRSLSALWLPQAPR*RGGSGR Trigger: TCTCCCTGAGCCACCTCGCCACCGTGGGGCCTGGGG...GAGCCACAGAGCTGAGAGACTTCTGAGTGCTAGTGCCTCCCCACACCTGAGCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR TCA 90 bp | CCGGACCTTGGGGGCCTTCTCACCAGGCTTAAGGGGATACTCTGCCGGCAAAGTGGCCAGACTGCAGGATaGTGCCGCTGTCGGAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: PDLGGLLTRLKGILCRQSGQTAG*CRCRSH Trigger: GTGACTCCGACAGCGGCATCATCCTGCAGTCTGGCC...ACTTTGCCGGCAGAGTATCCCCTTAAGCCTGGTGAGAAGGCCCCCAAGGTCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153910.2 |
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| CDS-3UTR GCA 90 bp | ACCAGGCTTAAGGGGATACTCTGCCGGCAAAGTCCCAGTCAGCTCCGCCTCCCTCTGTCCGGGCCAGACTaGAGGATGATGCCGCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: TRLKGILCRQSPSQLRLPLSGPD*RMMPLS Trigger: CGACAGCGGCATCATCCTGCAGTCTGGCCCGGACAG...AGGGAGGCGGAGCTGACTGGGACTTTGCCGGCAGAGTATCCCCTTAAGCCTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153910.2 |
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| CDS-3UTR CCA 90 bp | ATGCACTGGGGAAGGGGCTCAGAAGCCATACAATATGGCAAGTGGAGGTTGGGAGGGTGGCTGGGGCACTaGTGCGGCCCTGACGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: MHWGRGSEAIQYGKWRLGGWLGH*CGPDAG Trigger: GCCAGCGTCAGGGCCGCACCAGTGCCCCAGCCACCC...TCCCAACCTCCACTTGCCATATTGTATGGCTTCTGAGCCCCTTCCCCAGTGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR TCA 90 bp | GCCTGTGCCCTGAAGGGGAGAGGAGAGTTCTGCCCAGCATCTGGGAAACAAGGGTGTCGTCAGAGGCACTaGGTTCTCTGCCCAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ACALKGRGEFCPASGKQGCRQRH*VLCPGR Trigger: CCTCCCTGGGCAGAGAACTCAGTGCCTCTGACGACA...CCCTTGTTTCCCAGATGCTGGGCAGAACTCTCCTCTCCCCTTCAGGGCACAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR GCA 90 bp | AAGGGGAGAGGAGAGTTCTGCCCAGCATCTGGGAAACAAGGGAAGAGTCCCTGTACGCTGCTCCGATCCTaGGCCGGACCTTGGGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: KGRGEFCPASGKQGKSPCTLLRS*AGPWGP Trigger: AGGCCCCCAAGGTCCGGCGCAGGATCGGAGCAGCGT...ACAGGGACTCTTCCCTTGTTTCCCAGATGCTGGGCAGAACTCTCCTCTCCCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR CCA 90 bp | TGGGAAACAAGGGAAGAGTCCCTGTTGAGGGAGTCCCACATCCGGCCTCCAGCCAGGGGTGGTCCAGGCTaGTCTCCTTCCAGGGACTGT | + |
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Preference number: 4 (lower is better) Translates to: WETREESLLRESHIRPPARGGPG*SPSRDC Trigger: ACAGTCCCTGGAAGGAGACCAGCCTGGACCACCCCT...GGCTGGAGGCCGGATGTGGGACTCCCTCAACAGGGACTCTTCCCTTGTTTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR CCA 90 bp | CCACATCCGGCCTCCAGCCTTAAGAAGCAACAGGTATCTCAGAAAGAGGGCCCACCTGCATCTCAGGGGTaGCTGGGGCACTGGTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: PHPASSLKKQQVSQKEGPPASQG*LGHWCG Trigger: GCCGCACCAGTGCCCCAGCCACCCCTGAGATGCAGG...TGGGCCCTCTTTCTGAGATACCTGTTGCTTCTTAAGGCTGGAGGCCGGATGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR CCA 90 bp | AGGGAGTCCCACATCCGGCCTCCAGCCTTAAGAAGCAACAGGTATCTCAGAAAGCTCTCTGCCACAGGCTaGGCCCCAGGCCCCACGGTG | + |
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Preference number: 4 (lower is better) Translates to: RESHIRPPALRSNRYLRKLSATG*APGPTV Trigger: CACCGTGGGGCCTGGGGCCCAGCCTGTGGCAGAGAG...CTTTCTGAGATACCTGTTGCTTCTTAAGGCTGGAGGCCGGATGTGGGACTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR TCA 90 bp | GGAGGCACTAGCACTCAGAAGTCTCTCAGCTCTGTGGCTCAGGATCTAAGGCACCACCCTCAGAGACTGTaGCTGGCCCCTCCTGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: GGTSTQKSLSSVAQDLRHHPQRL*LAPPAL Trigger: CAGGGCAGGAGGGGCCAGTCACAGTCTCTGAGGGTG...GTGCCTTAGATCCTGAGCCACAGAGCTGAGAGACTTCTGAGTGCTAGTGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR TCA 90 bp | GGAGTCCCACATCCGGCCTCCAGCCTTAAGAAGCAACAGGTATCTCAGAAAGAGAGACTGCTGCCTTGCTaGGTCCCCGGCCCGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: GVPHPASSLKKQQVSQKERLLPC*VPGPQD Trigger: GTCCTGCGGGCCGGGGACTCAGCAAGGCAGCAGTCT...CTCTTTCTGAGATACCTGTTGCTTCTTAAGGCTGGAGGCCGGATGTGGGACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR GCA 90 bp | ACAGGTATCTCAGAAAGAGGGCCCAGAGCATATGGGACGTCTCAAGGGGCCCTCCTGTCCGGGCCAGACTaGAGGATGATGCCGCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: TGISERGPRAYGTSQGALLSGPD*RMMPLS Trigger: CGACAGCGGCATCATCCTGCAGTCTGGCCCGGACAG...GAGGGCCCCTTGAGACGTCCCATATGCTCTGGGCCCTCTTTCTGAGATACCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR GCA 90 bp | CCACATCCGGCCTCCAGCCTTAAGAAGCAACAGGTATCTCAGAAAGAGGGCCCAGCAGCGTGCTTCCGCTaGCTGCGTGCCTGTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PHPASSLKKQQVSQKEGPAACFR*LRACLL Trigger: CAGCAGACAGGCACGCAGGCAGCGGAAGCACGCTGC...TGGGCCCTCTTTCTGAGATACCTGTTGCTTCTTAAGGCTGGAGGCCGGATGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR GCA 90 bp | GGAGGCACTAGCACTCAGAAGTCTCTCAGCTCTGTGGCTCAGGATCTAAGGCACGGCAGCACCCACGGCTaGACGACACAGCTCCCACTC | + |
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Preference number: 4 (lower is better) Translates to: GGTSTQKSLSSVAQDLRHGSTHG*TTQLPL Trigger: GAGTGGGAGCTGTGTCGTGCAGCCGTGGGTGCTGCC...GTGCCTTAGATCCTGAGCCACAGAGCTGAGAGACTTCTGAGTGCTAGTGCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR CCA 90 bp | CGGCCTCCAGCCTTAAGAAGCAACAGGTATCTCAGAAAGAGGGCCCAGAGCATACATCTCAGGGGTGGCTaGGGCACTGGTGCGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: RPPALRSNRYLRKRAQSIHLRGG*GTGAAL Trigger: CAGGGCCGCACCAGTGCCCCAGCCACCCCTGAGATG...TATGCTCTGGGCCCTCTTTCTGAGATACCTGTTGCTTCTTAAGGCTGGAGGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR TCA 90 bp | GCATCTATGCACTGGGGAAGGGGCTCAGAAGCCATACAATATGGCAAGTGGAGGGCACTGGTGCGGCCCTaGCGCTGGCCGGGAACATTT | + |
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Preference number: 4 (lower is better) Translates to: ASMHWGRGSEAIQYGKWRALVRP*RWPGTF Trigger: AAATGTTCCCGGCCAGCGTCAGGGCCGCACCAGTGC...CCTCCACTTGCCATATTGTATGGCTTCTGAGCCCCTTCCCCAGTGCATAGATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR CCA 90 bp | ATCTATGCACTGGGGAAGGGGCTCAGAAGCCATACAATATGGCAAGTGGAGGTTGGGGCACCTGTGTCCTaGGTCCTGAGGCCCGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: IYALGKGLRSHTIWQVEVGAPVS*VLRPAR Trigger: TCGGGCGGGCCTCAGGACCCAGGACACAGGTGCCCC...AACCTCCACTTGCCATATTGTATGGCTTCTGAGCCCCTTCCCCAGTGCATAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR TCA 90 bp | GCATCTATGCACTGGGGAAGGGGCTCAGAAGCCATACAATATGGCAAGTGGAGGGGCCAGACTGCAGGATaGTGCCGCTGTCGGAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: ASMHWGRGSEAIQYGKWRGQTAG*CRCRSH Trigger: GTGACTCCGACAGCGGCATCATCCTGCAGTCTGGCC...CCTCCACTTGCCATATTGTATGGCTTCTGAGCCCCTTCCCCAGTGCATAGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR TCA 90 bp | AGGGAGTCCCACATCCGGCCTCCAGCCTTAAGAAGCAACAGGTATCTCAGAAAGGCCGCCTCGGTGATCTaGAGCTGCAGAGCCAACTGG | + |
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Preference number: 4 (lower is better) Translates to: RESHIRPPALRSNRYLRKAASVI*SCRANW Trigger: CCAGTTGGCTCTGCAGCTTCAGATCACCGAGGCGGC...CTTTCTGAGATACCTGTTGCTTCTTAAGGCTGGAGGCCGGATGTGGGACTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR TCA 90 bp | AAGCAACAGGTATCTCAGAAAGAGGGCCCAGAGCATATGGGACGTCTCAAGGGGCGAAGGTGGTGCCGGTaGCTCTGGGGGAGGTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: KQQVSQKEGPEHMGRLKGRRWCR*LWGRFW Trigger: CCAAAACCTCCCCCAGAGTCACCGGCACCACCTTCG...CCCCTTGAGACGTCCCATATGCTCTGGGCCCTCTTTCTGAGATACCTGTTGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR GCA 90 bp | ATTGAAGTATTTGGCACAAGGTTGCCCTGTAACGGAGGGCACCGCCACGGTGCAGCTGAGGTTCTCCTCTaGACACAGCCTTCGAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: IEVFGTRLPCNGGHRHGAAEVLL*TQPSSR Trigger: GCGGCTCGAAGGCTGTGTGCAGAGGAGAACCTCAGC...TGCACCGTGGCGGTGCCCTCCGTTACAGGGCAACCTTGTGCCAAATACTTCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR GCA 90 bp | ATTGAAGTATTTGGCACAAGGTTGCCCTGTAACGGAGGGCACCGCCACGGTGCATGTCTGGACTGCTGCTaGCAGGTGAGGTGGGATGGG | + |
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Preference number: 4 (lower is better) Translates to: IEVFGTRLPCNGGHRHGACLDCC*QVRWDG Trigger: CCCATCCCACCTCACCTGGCAGCAGCAGTCCAGACA...TGCACCGTGGCGGTGCCCTCCGTTACAGGGCAACCTTGTGCCAAATACTTCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR GCA 90 bp | ACAGGTATCTCAGAAAGAGGGCCCAGAGCATATGGGACGTCTCAAGGGGCCCTCAGGAGATGTCTGGACTaGTGCTGCCAGGTGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TGISERGPRAYGTSQGALRRCLD*CCQVRW Trigger: CCACCTCACCTGGCAGCAGCAGTCCAGACATCTCCT...GAGGGCCCCTTGAGACGTCCCATATGCTCTGGGCCCTCTTTCTGAGATACCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR CCA 90 bp | TCCCACATCCGGCCTCCAGCCTTAAGAAGCAACAGGTATCTCAGAAAGAGGGCCTCACTGTGTAATGAGTaGGGCGGCGGCGGGGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: SHIRPPALRSNRYLRKRASLCNE*GGGGER Trigger: CCTTTCCCCGCCGCCGCCCCACTCATTACACAGTGA...GGCCCTCTTTCTGAGATACCTGTTGCTTCTTAAGGCTGGAGGCCGGATGTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR CCA 90 bp | GGTTGGGACTACTGTAGGGTATGGGAAGAACACCATGACAGAAATGCCTGTGCCGGCAGGGTGTGGCAGTaGGGGCTTGCCGGGTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: GWDYCRVWEEHHDRNACAGRVWQ*GLAGCE Trigger: TTCACACCCGGCAAGCCCCCACTGCCACACCCTGCC...GGCACAGGCATTTCTGTCATGGTGTTCTTCCCATACCCTACAGTAGTCCCAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| 3UTR CAA 72 bp | CTGCCCAGCATCTGGGAAACAAGGGAAGAGTCCCTGTaGAGGGAGTCCCACATCCGGCCTCCAGCCTTAAGA | + |
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Preference number: 4 (lower is better) Translates to: LPSIWETREESL*RESHIRPPALR Trigger: TCTTAAGGCTGGAGGCCGGATGTGGGACTCCCTCAACAGGGACTCTTCCCTTGTTTCCCAGATGCTGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR TCA 90 bp | ACCTTGGGGGCCTTCTCACCAGGCTTAAGGGGATACTCTGCCGGCAAAGTCCCACGCTGTCGGAGTCACTaGCTTCATCCTTACTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TLGAFSPGLRGYSAGKVPRCRSH*LHPYSP Trigger: TGGAGAGTAAGGATGAAGTCAGTGACTCCGACAGCG...TGGGACTTTGCCGGCAGAGTATCCCCTTAAGCCTGGTGAGAAGGCCCCCAAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153910.2 |
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| CDS-3UTR GCA 90 bp | ATTTTATTGAAGTATTTGGCACAAGGTTGCCCTGTAACGGAGGGCACCGCCACGAGAGGAAGGAGGGGCTaGACTGGTCCCAGCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: ILLKYLAQGCPVTEGTATRGRRG*TGPSLG Trigger: GCCCAGGCTGGGACCAGTGCAGCCCCTCCTTCCTCT...CGTGGCGGTGCCCTCCGTTACAGGGCAACCTTGTGCCAAATACTTCAATAAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR GCA 90 bp | CAAGTGGAGGTTGGGACTACTGTAGGGTATGGGAAGAACACCATGACAGAAATGTCCTGCAGCGCAGCGTaGTTCCGCTGCCTGCGTGCC | + |
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Preference number: 4 (lower is better) Translates to: QVEVGTTVGYGKNTMTEMSCSAA*FRCLRA Trigger: GGCACGCAGGCAGCGGAAGCACGCTGCGCTGCAGGA...CATTTCTGTCATGGTGTTCTTCCCATACCCTACAGTAGTCCCAACCTCCACTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR GCA 90 bp | GCATCTATGCACTGGGGAAGGGGCTCAGAAGCCATACAATATGGCAAGTGGAGGAGGGTGTGCGCACAATaGGGCTGTGGGAGGGTACCA | + |
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Preference number: 4 (lower is better) Translates to: ASMHWGRGSEAIQYGKWRRVCAQ*GCGRVP Trigger: TGGTACCCTCCCACAGCCGCATTGTGCGCACACCCT...CCTCCACTTGCCATATTGTATGGCTTCTGAGCCCCTTCCCCAGTGCATAGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR CCA 90 bp | GGAGGCACTAGCACTCAGAAGTCTCTCAGCTCTGTGGCTCAGGATCTAAGGCACAGCTTCAGGACCTGTTaGTCCCGCCCATCTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: GGTSTQKSLSSVAQDLRHSFRTC*SRPSSL Trigger: GAGGGAAGATGGGCGGGACCAACAGGTCCTGAAGCT...GTGCCTTAGATCCTGAGCCACAGAGCTGAGAGACTTCTGAGTGCTAGTGCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR GCA 90 bp | AGAAGCAACAGGTATCTCAGAAAGAGGGCCCAGAGCATATGGGACGTCTCAAGGAGCTTCTTCTCCTCCTaGAGCGCAGCGTGCTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: RSNRYLRKRAQSIWDVSRSFFSS*SAACFR Trigger: GCGGAAGCACGCTGCGCTGCAGGAGGAGAAGAAGCT...CCTTGAGACGTCCCATATGCTCTGGGCCCTCTTTCTGAGATACCTGTTGCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR CCA 90 bp | AAGGGGAGAGGAGAGTTCTGCCCAGCATCTGGGAAACAAGGGAAGAGTCCCTGTGGAGGTTTTGGCGCTTaGGAGTCTTCTTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGRGEFCPASGKQGKSPCGGFGA*ESSSSR Trigger: CCTGGAGGAAGAAGACTCCCAAGCGCCAAAACCTCC...ACAGGGACTCTTCCCTTGTTTCCCAGATGCTGGGCAGAACTCTCCTCTCCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGTATCTCAGAAAGAGGGCCCAGAGCATATGGGACGTCTCAAGGGGCCCTCGCTCAGAAGACTTCCTaGGCTTCTCATAGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGISERGPRAYGTSQGALAQKTS*ASHRGG Trigger: ACCACCCCTATGAGAAGCCCAGGAAGTCTTCTGAGC...GAGGGCCCCTTGAGACGTCCCATATGCTCTGGGCCCTCTTTCTGAGATACCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAACAGGTATCTCAGAAAGAGGGCCCAGAGCATATGGGACGTCTCAAGGGGTGCTGCCAGGTGAGGTaGGATGGGAGATGCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQQVSQKEGPEHMGRLKGCCQVR*DGRCWR Trigger: TCTCCAGCATCTCCCATCCCACCTCACCTGGCAGCA...CCCCTTGAGACGTCCCATATGCTCTGGGCCCTCTTTCTGAGATACCTGTTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR TCA 90 bp | TCCCACATCCGGCCTCCAGCCTTAAGAAGCAACAGGTATCTCAGAAAGAGGGCCCGCTGTCGGAGTCACTaGCTTCATCCTTACTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SHIRPPALRSNRYLRKRARCRSH*LHPYSP Trigger: TGGAGAGTAAGGATGAAGTCAGTGACTCCGACAGCG...GGCCCTCTTTCTGAGATACCTGTTGCTTCTTAAGGCTGGAGGCCGGATGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR TCA 90 bp | TGGGACTACTGTAGGGTATGGGAAGAACACCATGACAGAAATGCCTGTGCCCTGTGCGTGCCTGTCTGCTaGGGTTCTCCTCTGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: WDYCRVWEEHHDRNACALCVPVC*GSPLHT Trigger: TGTGTGCAGAGGAGAACCTCAGCAGACAGGCACGCA...CAGGGCACAGGCATTTCTGTCATGGTGTTCTTCCCATACCCTACAGTAGTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGTTGGGACTACTGTAGGGTATGGGAAGAACACCATGACAGAAATGCCTGTTCACCCAGGCAACGCTaGAGGTCCCGCAGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGWDYCRVWEEHHDRNACSPRQR*RSRSFF Trigger: GAAGAAGCTGCGGGACCTTCAGCGTTGCCTGGGTGA...ACAGGCATTTCTGTCATGGTGTTCTTCCCATACCCTACAGTAGTCCCAACCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR TCA 90 bp | GCATCTATGCACTGGGGAAGGGGCTCAGAAGCCATACAATATGGCAAGTGGAGGTGCTGGACTCGCTACTaGGCTCAGAAGACTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASMHWGRGSEAIQYGKWRCWTRY*AQKTSW Trigger: CCAGGAAGTCTTCTGAGCTCAGTAGCGAGTCCAGCA...CCTCCACTTGCCATATTGTATGGCTTCTGAGCCCCTTCCCCAGTGCATAGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAGTCAGCTCCGCCTCCCTCAGGCAGAGTCTGCGCAGCTCCTCCAGGCAGGTTTAACTTCGGCATTTaGAGCATCCCAAATGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQSAPPPSGRVCAAPPGRFNFGI*SIPNVK Trigger: TTTAACATTTGGGATGCTGCAAATGCCGAAGTTAAA...CCTGCCTGGAGGAGCTGCGCAGACTCTGCCTGAGGGAGGCGGAGCTGACTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153910.2 |
||
| CDS-3UTR GCA 90 bp | ATTTTATTGAAGTATTTGGCACAAGGTTGCCCTGTAACGGAGGGCACCGCCACGACTGGCGCTCTAGGCTaGTCAGGGGGTCCTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILLKYLAQGCPVTEGTATTGALG*SGGPLC Trigger: ACAGAGAGGACCCCCTGAGCAGCCTAGAGCGCCAGT...CGTGGCGGTGCCCTCCGTTACAGGGCAACCTTGTGCCAAATACTTCAATAAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR GCA 90 bp | ATGCACTGGGGAAGGGGCTCAGAAGCCATACAATATGGCAAGTGGAGGTTGGGAAGGTGGGATGGGAGATaGTGGAGACATCAGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: MHWGRGSEAIQYGKWRLGRWDGR*WRHQSH Trigger: GTGGCTCTGATGTCTCCAGCATCTCCCATCCCACCT...TCCCAACCTCCACTTGCCATATTGTATGGCTTCTGAGCCCCTTCCCCAGTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGGAGAGGAGAGTTCTGCCCAGCATCTGGGAAACAAGGGAAGAGTCCCTGTTCCATGATGAGTTTCTaGGAAGAGGGGGCACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGRGEFCPASGKQGKSPCSMMSF*EEGAQR Trigger: CCTCTGTGCCCCCTCTTCCCAGAAACTCATCATGGA...ACAGGGACTCTTCCCTTGTTTCCCAGATGCTGGGCAGAACTCTCCTCTCCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGTTGGGACTACTGTAGGGTATGGGAAGAACACCATGACAGAAATGCCTGTCTCAGAGACTGTGACTaGCCCCTCCTGCCCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: GGWDYCRVWEEHHDRNACLRDCD*PLLPCI Trigger: GATGCAGGGCAGGAGGGGCCAGTCACAGTCTCTGAG...ACAGGCATTTCTGTCATGGTGTTCTTCCCATACCCTACAGTAGTCCCAACCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR GCA 90 bp | ACAATATGGCAAGTGGAGGTTGGGACTACTGTAGGGTATGGGAAGAACACCATGCTTCCGCTGCCTGCGTaGCTGTCTGCTGAGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TIWQVEVGTTVGYGKNTMLPLPA*LSAEVL Trigger: GAGAACCTCAGCAGACAGGCACGCAGGCAGCGGAAG...CATGGTGTTCTTCCCATACCCTACAGTAGTCCCAACCTCCACTTGCCATATTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR GCA 90 bp | ACAATATGGCAAGTGGAGGTTGGGACTACTGTAGGGTATGGGAAGAACACCATGTCAGGCACAAAGACTTaGACTGGGGCCCCGTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: TIWQVEVGTTVGYGKNTMSGTKT*TGAPSV Trigger: GACGGACGGGGCCCCAGTGCAAGTCTTTGTGCCTGA...CATGGTGTTCTTCCCATACCCTACAGTAGTCCCAACCTCCACTTGCCATATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR CCA 90 bp | TACAATATGGCAAGTGGAGGTTGGGACTACTGTAGGGTATGGGAAGAACACCATCCAGCACCCACAGGCTaGAAGGGTTGGGCTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YNMASGGWDYCRVWEEHHPAPTG*KGWAGP Trigger: AGGACCAGCCCAACCCTTCCAGCCTGTGGGTGCTGG...ATGGTGTTCTTCCCATACCCTACAGTAGTCCCAACCTCCACTTGCCATATTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGCAACAGGTATCTCAGAAAGAGGGCCCAGAGCATATGGGACGTCTCAAGGCGGGAACATTTCGGATaGGGACCACGTGGTAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSNRYLRKRAQSIWDVSRREHFG*GPRGKR Trigger: CCTCTTACCACGTGGTCCCCATCCGAAATGTTCCCG...CCTTGAGACGTCCCATATGCTCTGGGCCCTCTTTCTGAGATACCTGTTGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR CCA 90 bp | GCATCTATGCACTGGGGAAGGGGCTCAGAAGCCATACAATATGGCAAGTGGAGGTGGGATGGGAGATGCTaGAGACATCAGAGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASMHWGRGSEAIQYGKWRWDGRC*RHQSHC Trigger: ACAGTGGCTCTGATGTCTCCAGCATCTCCCATCCCA...CCTCCACTTGCCATATTGTATGGCTTCTGAGCCCCTTCCCCAGTGCATAGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTATTGAAGTATTTGGCACAAGGTTGCCCTGTAACGGAGGGCACCGCCACGCTCTGGGGGAGGTTTTaGCGCTTGGGAGTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILLKYLAQGCPVTEGTATLWGRF*RLGVFF Trigger: GAAGAAGACTCCCAAGCGCCAAAACCTCCCCCAGAG...CGTGGCGGTGCCCTCCGTTACAGGGCAACCTTGTGCCAAATACTTCAATAAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGTTGGGACTACTGTAGGGTATGGGAAGAACACCATGACAGAAATGCCTGTTCTTCAGAGCAGGAATaGCAGGCAGGGTGTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGWDYCRVWEEHHDRNACSSEQE*QAGCGS Trigger: ACTGCCACACCCTGCCTGCCATTCCTGCTCTGAAGA...ACAGGCATTTCTGTCATGGTGTTCTTCCCATACCCTACAGTAGTCCCAACCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTGGAGGTTGGGACTACTGTAGGGTATGGGAAGAACACCATGACAGAAATGAGATGTCTGGACTGCTaGTGCCAGGTGAGGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QVEVGTTVGYGKNTMTEMRCLDC*CQVRWD Trigger: ATCCCACCTCACCTGGCAGCAGCAGTCCAGACATCT...CATTTCTGTCATGGTGTTCTTCCCATACCCTACAGTAGTCCCAACCTCCACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR CCA 90 bp | ACAATATGGCAAGTGGAGGTTGGGACTACTGTAGGGTATGGGAAGAACACCATGTTCCAGGGACTGTTTTaGATGGGAGCCCGTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TIWQVEVGTTVGYGKNTMFQGLF*MGARSW Trigger: CCAGGAACGGGCTCCCATCCAAAACAGTCCCTGGAA...CATGGTGTTCTTCCCATACCCTACAGTAGTCCCAACCTCCACTTGCCATATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR CCA 90 bp | GCATCTATGCACTGGGGAAGGGGCTCAGAAGCCATACAATATGGCAAGTGGAGGTGTGAAGCAGGAGTCTaGCACTGTCACTGTGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: ASMHWGRGSEAIQYGKWRCEAGV*HCHCVM Trigger: CATTACACAGTGACAGTGCCAGACTCCTGCTTCACA...CCTCCACTTGCCATATTGTATGGCTTCTGAGCCCCTTCCCCAGTGCATAGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR CCA 90 bp | ATCTATGCACTGGGGAAGGGGCTCAGAAGCCATACAATATGGCAAGTGGAGGTTGCTTGCGTACTGCATTaGTCAGCTCTTTCATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IYALGKGLRSHTIWQVEVACVLH*SALSLE Trigger: CTCCAATGAAAGAGCTGACCAATGCAGTACGCAAGC...AACCTCCACTTGCCATATTGTATGGCTTCTGAGCCCCTTCCCCAGTGCATAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| 3UTR CAA 72 bp | AGCATATGGGACGTCTCAAGGGGCCCTCTATGCCACTaGTCCTACATAAGGAGACAAATGCTGTCGATTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SIWDVSRGPLCH*SYIRRQMLSIS Trigger: ACTAATCGACAGCATTTGTCTCCTTATGTAGGACAAGTGGCATAGAGGGCCCCTTGAGACGTCCCATATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR GCA 90 bp | GCATCTATGCACTGGGGAAGGGGCTCAGAAGCCATACAATATGGCAAGTGGAGGTTTAACTTCGGCATTTaGAGCATCCCAAATGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASMHWGRGSEAIQYGKWRFNFGI*SIPNVK Trigger: TTTAACATTTGGGATGCTGCAAATGCCGAAGTTAAA...CCTCCACTTGCCATATTGTATGGCTTCTGAGCCCCTTCCCCAGTGCATAGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS GCA 90 bp | GCACTGTCACTGTGTAATGAGTGGGGCGGCGGCGGGGAAAGGCACTaGGACCTCGGCCCTCCGCGCCTGCTCGGAAGGAGTCCACCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ALSLCNEWGGGGERH*DLGPPRLLGRSPPS Trigger: TGAGGGTGGACTCCTTCCGAGCAGGCGCGGAGGGCCGAGGTCGCAGTGCCTTTCCCCGCCGCCGCCCCACTCATTACACAGTGACAGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS CCA 90 bp | GGATGGGGACCACGTGGTAAGAGGCAGCATCCAGCACCCACAGGCTaGAAGGGTTGGGCTGGTCCTGAGGAGTGGTGGCCGGGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GWGPRGKRQHPAPTG*KGWAGPEEWWPGCW Trigger: CCAGCAGCCCGGCCACCACTCCTCAGGACCAGCCCAACCCTTCCAGCCTGTGGGTGCTGGATGCTGCCTCTTACCACGTGGTCCCCATCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS CCA 90 bp | CTGGGGCACTGGTGCGGCCCTGACGCTGGCCGGGAACATTTCGGATaGGGACCACGTGGTAAGAGGCAGCATCCAGCACCCACAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGHWCGPDAGREHFG*GPRGKRQHPAPTGW Trigger: CCAGCCTGTGGGTGCTGGATGCTGCCTCTTACCACGTGGTCCCCATCCGAAATGTTCCCGGCCAGCGTCAGGGCCGCACCAGTGCCCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS GCA 90 bp | CAGGGGGTCCTCTCTGTGGAGGGCCCACTCATCCAGCTTGTACGCTaGTCCGATCCTGCGCCGGACCTTGGGGGCCTTCTCACCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QGVLSVEGPLIQLVR*SDPAPDLGGLLTRL Trigger: AAGCCTGGTGAGAAGGCCCCCAAGGTCCGGCGCAGGATCGGAGCAGCGTACAAGCTGGATGAGTGGGCCCTCCACAGAGAGGACCCCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 |
||
| CDS GCA 90 bp | GTCCCCGGCCCGCAGGACTGTCCTTTAGTGAGGGTGTGCGCACAATaGGGCTGTGGGAGGGTACCAGTCGCTGGTAACGCAGGGGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VPGPQDCPLVRVCAQ*GCGRVPVAGNAGVH Trigger: GTGCACCCCTGCGTTACCAGCGACTGGTACCCTCCCACAGCCGCATTGTGCGCACACCCTCACTAAAGGACAGTCCTGCGGGCCGGGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCAGTCAGCTCCGCCTCCCTCAGGCAGAGTCTGCGCAGCTCCTCCAGGCAGCAGCTTCAGGACCTGTaGGTCCCGCCCATCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VPVSSASLRQSLRSSSRQQLQDL*VPPIFP Trigger: AGGGAAGATGGGCGGGACCAACAGGTCCTGAAGCTG...CTGCCTGGAGGAGCTGCGCAGACTCTGCCTGAGGGAGGCGGAGCTGACTGGGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153910.2 |
||
| CDS GCA 90 bp | CAGCTTCTTCTCCTCCTGCAGCGCAGCGTGCTTCCGCTGCCTGCGTaGCTGTCTGCTGAGGTTCTCCTCTGCACACAGCCTTCGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QLLLLLQRSVLPLPA*LSAEVLLCTQPSSR Trigger: GCGGCTCGAAGGCTGTGTGCAGAGGAGAACCTCAGCAGACAGGCACGCAGGCAGCGGAAGCACGCTGCGCTGCAGGAGGAGAAGAAGCTG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 |
||
| CDS TCA 90 bp | CTGAGGTTCTCCTCTGCACACAGCCTTCGAGCCGCCTCGGTGATCTaGAGCTGCAGAGCCAACTGGCGCTCTAGGCTGCTCAGGGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRFSSAHSLRAASVI*SCRANWRSRLLRGS Trigger: GGACCCCCTGAGCAGCCTAGAGCGCCAGTTGGCTCTGCAGCTTCAGATCACCGAGGCGGCTCGAAGGCTGTGTGCAGAGGAGAACCTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 |
||
| CDS TCA 90 bp | TGGGCTGGTCCTGAGGAGTGGTGGCCGGGCTGCTGGACTCGCTACTaGGCTCAGAAGACTTCCTGGGCTTCTCATAGGGGTGGTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: WAGPEEWWPGCWTRY*AQKTSWASHRGGPG Trigger: GCCTGGACCACCCCTATGAGAAGCCCAGGAAGTCTTCTGAGCTCAGTAGCGAGTCCAGCAGCCCGGCCACCACTCCTCAGGACCAGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS GCA 90 bp | AGCGTGCTTCCGCTGCCTGCGTGCCTGTCTGCTGAGGTTCTCCTCTaGACACAGCCTTCGAGCCGCCTCGGTGATCTGAAGCTGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVLPLPACLSAEVLL*TQPSSRLGDLKLQS Trigger: GCTCTGCAGCTTCAGATCACCGAGGCGGCTCGAAGGCTGTGTGCAGAGGAGAACCTCAGCAGACAGGCACGCAGGCAGCGGAAGCACGCT 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 |
||
| CDS GCA 90 bp | GCAGGCCTCCAGCCTCGCTTCCAGAGCCCTCTGCTGCTTGCGTACTaGATTGGTCAGCTCTTTCATTGGAGAGACAGGGCTGTCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGLQPRFQSPLLLAY*IGQLFHWRDRAVRA Trigger: GGCCCGGACAGCCCTGTCTCTCCAATGAAAGAGCTGACCAATGCAGTACGCAAGCAGCAGAGGGCTCTGGAAGCGAGGCTGGAGGCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 ENSMUST00000195177.2 |
||
| CDS CCA 90 bp | AGGCTGGTCTCCTTCCAGGGACTGTTTTGGATGGGAGCCCGTTCCTaGCCGCCAGACTCAGGTCCTGTTGGCTGTAGGCCCTCAAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RLVSFQGLFWMGARS*PPDSGPVGCRPSRL Trigger: GAGCCTTGAGGGCCTACAGCCAACAGGACCTGAGTCTGGCGGCCAGGAACGGGCTCCCATCCAAAACAGTCCCTGGAAGGAGACCAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS CCA 90 bp | CATAGGGGTGGTCCAGGCTGGTCTCCTTCCAGGGACTGTTTTGGATaGGAGCCCGTTCCTGGCCGCCAGACTCAGGTCCTGTTGGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: HRGGPGWSPSRDCFG*EPVPGRQTQVLLAV Trigger: TACAGCCAACAGGACCTGAGTCTGGCGGCCAGGAACGGGCTCCCATCCAAAACAGTCCCTGGAAGGAGACCAGCCTGGACCACCCCTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS CCA 90 bp | CCTCCAGCCTCGCTTCCAGAGCCCTCTGCTGCTTGCGTACTGCATTaGTCAGCTCTTTCATTGGAGAGACAGGGCTGTCCGGGCCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: PPASLPEPSAACVLH*SALSLERQGCPGQT Trigger: AGTCTGGCCCGGACAGCCCTGTCTCTCCAATGAAAGAGCTGACCAATGCAGTACGCAAGCAGCAGAGGGCTCTGGAAGCGAGGCTGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 ENSMUST00000195177.2 |
||
| CDS CCA 90 bp | GGGGCCTCAGAAAGGAGATGTCTGGACTGCTGCTGCCAGGTGAGGTaGGATGGGAGATGCTGGAGACATCAGAGCCACTGTCTTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GASERRCLDCCCQVR*DGRCWRHQSHCLQS Trigger: GCTCTGAAGACAGTGGCTCTGATGTCTCCAGCATCTCCCATCCCACCTCACCTGGCAGCAGCAGTCCAGACATCTCCTTTCTGAGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR CAA 90 bp | ACAAGGGAAGAGTCCCTGTTGAGGGAGTCCCACATCCGGCCTCCAGCCTTAAGACAGCTTCAGGACCTGTaGGTCCCGCCCATCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TREESLLRESHIRPPALRQLQDL*VPPIFP Trigger: AGGGAAGATGGGCGGGACCAACAGGTCCTGAAGCTG...TCTTAAGGCTGGAGGCCGGATGTGGGACTCCCTCAACAGGGACTCTTCCCTTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS TCA 90 bp | ACAGAGGGGCCTCAGAAAGGAGATGTCTGGACTGCTGCTGCCAGGTaGGGTGGGATGGGAGATGCTGGAGACATCAGAGCCACTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TEGPQKGDVWTAAAR*GGMGDAGDIRATVF Trigger: GAAGACAGTGGCTCTGATGTCTCCAGCATCTCCCATCCCACCTCACCTGGCAGCAGCAGTCCAGACATCTCCTTTCTGAGGCCCCTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS CCA 90 bp | AGATGTCTGGACTGCTGCTGCCAGGTGAGGTGGGATGGGAGATGCTaGAGACATCAGAGCCACTGTCTTCAGAGCAGGAATGGCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RCLDCCCQVRWDGRC*RHQSHCLQSRNGRQ Trigger: CTGCCTGCCATTCCTGCTCTGAAGACAGTGGCTCTGATGTCTCCAGCATCTCCCATCCCACCTCACCTGGCAGCAGCAGTCCAGACATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR CAA 90 bp | ACAAGGGAAGAGTCCCTGTTGAGGGAGTCCCACATCCGGCCTCCAGCCTTAAGAAGAGCCCTCTGCTGCTaGCGTACTGCATTGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TREESLLRESHIRPPALRRALCC*RTALVS Trigger: GCTGACCAATGCAGTACGCAAGCAGCAGAGGGCTCT...TCTTAAGGCTGGAGGCCGGATGTGGGACTCCCTCAACAGGGACTCTTCCCTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAACAGGTATCTCAGAAAGAGGGCCCAGAGCATATGGGACGTCTCAAGGGGGCCCACTCATCCAGCTaGTACGCTGCTCCGATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KQQVSQKEGPEHMGRLKGAHSSS*YAAPIL Trigger: CAGGATCGGAGCAGCGTACAAGCTGGATGAGTGGGC...CCCCTTGAGACGTCCCATATGCTCTGGGCCCTCTTTCTGAGATACCTGTTGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR CAA 90 bp | GCATCTATGCACTGGGGAAGGGGCTCAGAAGCCATACAATATGGCAAGTGGAGGCAGACTCAGGTCCTGTaGGCTGTAGGCCCTCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: ASMHWGRGSEAIQYGKWRQTQVL*AVGPQG Trigger: GCCTTGAGGGCCTACAGCCAACAGGACCTGAGTCTG...CCTCCACTTGCCATATTGTATGGCTTCTGAGCCCCTTCCCCAGTGCATAGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS GCA 90 bp | TTGGTCAGCTCTTTCATTGGAGAGACAGGGCTGTCCGGGCCAGACTaGAGGATGATGCCGCTGTCGGAGTCACTGACTTCATCCTTACTC | + |
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Preference number: 5 (lower is better) Translates to: LVSSFIGETGLSGPD*RMMPLSESLTSSLL Trigger: GAGTAAGGATGAAGTCAGTGACTCCGACAGCGGCATCATCCTGCAGTCTGGCCCGGACAGCCCTGTCTCTCCAATGAAAGAGCTGACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 ENSMUST00000195177.2 |
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| CDS-3UTR CAA 90 bp | ATCTATGCACTGGGGAAGGGGCTCAGAAGCCATACAATATGGCAAGTGGAGGTTCTCAGGCACAAAGACTaGCACTGGGGCCCCGTCCGT | + |
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Preference number: 5 (lower is better) Translates to: IYALGKGLRSHTIWQVEVLRHKD*HWGPVR Trigger: ACGGACGGGGCCCCAGTGCAAGTCTTTGTGCCTGAG...AACCTCCACTTGCCATATTGTATGGCTTCTGAGCCCCTTCCCCAGTGCATAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR CAA 90 bp | TACAATATGGCAAGTGGAGGTTGGGACTACTGTAGGGTATGGGAAGAACACCATTGGTCAGCTCTTTCATaGGAGAGACAGGGCTGTCCG | + |
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Preference number: 5 (lower is better) Translates to: YNMASGGWDYCRVWEEHHWSALS*ERQGCP Trigger: CGGACAGCCCTGTCTCTCCAATGAAAGAGCTGACCA...ATGGTGTTCTTCCCATACCCTACAGTAGTCCCAACCTCCACTTGCCATATTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS-3UTR CAA 90 bp | AGAAGCAACAGGTATCTCAGAAAGAGGGCCCAGAGCATATGGGACGTCTCAAGGTGCTTGCGTACTGCATaGGTCAGCTCTTTCATTGGA | + |
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Preference number: 5 (lower is better) Translates to: RSNRYLRKRAQSIWDVSRCLRTA*VSSFIG Trigger: TCCAATGAAAGAGCTGACCAATGCAGTACGCAAGCA...CCTTGAGACGTCCCATATGCTCTGGGCCCTCTTTCTGAGATACCTGTTGCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS CAA 72 bp | AGGGGGTCCTCTCTGTGGAGGGCCCACTCATCCAGCTaGTACGCTGCTCCGATCCTGCGCCGGACCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: RGSSLWRAHSSS*YAAPILRRTLG Trigger: CCCCAAGGTCCGGCGCAGGATCGGAGCAGCGTACAAGCTGGATGAGTGGGCCCTCCACAGAGAGGACCCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 |
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| CDS CAA 90 bp | AGGCTGCTCAGGGGGTCCTCTCTGTGGAGGGCCCACTCATCCAGCTaGTACGCTGCTCCGATCCTGCGCCGGACCTTGGGGGCCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: RLLRGSSLWRAHSSS*YAAPILRRTLGAFS Trigger: TGAGAAGGCCCCCAAGGTCCGGCGCAGGATCGGAGCAGCGTACAAGCTGGATGAGTGGGCCCTCCACAGAGAGGACCCCCTGAGCAGCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 |
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| CDS GCA 72 bp | CTCTCTGTGGAGGGCCCACTCATCCAGCTTGTACGCTaGTCCGATCCTGCGCCGGACCTTGGGGGCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LSVEGPLIQLVR*SDPAPDLGGLL Trigger: GAGAAGGCCCCCAAGGTCCGGCGCAGGATCGGAGCAGCGTACAAGCTGGATGAGTGGGCCCTCCACAGAGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 |
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| CDS GCA 72 bp | CTCCTCCTGCAGCGCAGCGTGCTTCCGCTGCCTGCGTaGCTGTCTGCTGAGGTTCTCCTCTGCACACAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LLLQRSVLPLPA*LSAEVLLCTQP Trigger: AGGCTGTGTGCAGAGGAGAACCTCAGCAGACAGGCACGCAGGCAGCGGAAGCACGCTGCGCTGCAGGAGGAG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 |
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| CDS CCA 72 bp | TGGTGCGGCCCTGACGCTGGCCGGGAACATTTCGGATaGGGACCACGTGGTAAGAGGCAGCATCCAGCACCC | + |
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Preference number: 6 (lower is better) Translates to: WCGPDAGREHFG*GPRGKRQHPAP Trigger: GGGTGCTGGATGCTGCCTCTTACCACGTGGTCCCCATCCGAAATGTTCCCGGCCAGCGTCAGGGCCGCACCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS CCA 72 bp | TGGCAGTGGGGGCTTGCCGGGTGTGAAGCAGGAGTCTaGCACTGTCACTGTGTAATGAGTGGGGCGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: WQWGLAGCEAGV*HCHCVMSGAAA Trigger: CGCCGCCGCCCCACTCATTACACAGTGACAGTGCCAGACTCCTGCTTCACACCCGGCAAGCCCCCACTGCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS CAA 72 bp | GCCGCGAAGGTGGTGCCGGTGACTCTGGGGGAGGTTTaGGCGCTTGGGAGTCTTCTTCCTCCAGGAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: AAKVVPVTLGEV*ALGSLLPPGAA Trigger: GGCTGCTCCTGGAGGAAGAAGACTCCCAAGCGCCAAAACCTCCCCCAGAGTCACCGGCACCACCTTCGCGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120339.8 ENSMUST00000150163.8 |
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| CDS CCA 72 bp | GGTCCAGGCTGGTCTCCTTCCAGGGACTGTTTTGGATaGGAGCCCGTTCCTGGCCGCCAGACTCAGGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: GPGWSPSRDCFG*EPVPGRQTQVL Trigger: CAGGACCTGAGTCTGGCGGCCAGGAACGGGCTCCCATCCAAAACAGTCCCTGGAAGGAGACCAGCCTGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS CCA 72 bp | GGGTGGTCCAGGCTGGTCTCCTTCCAGGGACTGTTTTaGATGGGAGCCCGTTCCTGGCCGCCAGACTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: GWSRLVSFQGLF*MGARSWPPDSG Trigger: ACCTGAGTCTGGCGGCCAGGAACGGGCTCCCATCCAAAACAGTCCCTGGAAGGAGACCAGCCTGGACCACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS CAA 90 bp | GCCCACTCATCCAGCTTGTACGCTGCTCCGATCCTGCGCCGGACCTaGGGGGCCTTCTCACCAGGCTTAAGGGGATACTCTGCCGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: AHSSSLYAAPILRRT*GAFSPGLRGYSAGK Trigger: TTTGCCGGCAGAGTATCCCCTTAAGCCTGGTGAGAAGGCCCCCAAGGTCCGGCGCAGGATCGGAGCAGCGTACAAGCTGGATGAGTGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 |
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| CDS TCA 72 bp | GGTTCTCCTCTGCACACAGCCTTCGAGCCGCCTCGGTaGTCTGAAGCTGCAGAGCCAACTGGCGCTCTAGGC | + |
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Preference number: 6 (lower is better) Translates to: GSPLHTAFEPPR*SEAAEPTGALG Trigger: GCCTAGAGCGCCAGTTGGCTCTGCAGCTTCAGATCACCGAGGCGGCTCGAAGGCTGTGTGCAGAGGAGAACC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 |
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| CDS TCA 72 bp | GGCAGGCAGGGTGTGGCAGTGGGGGCTTGCCGGGTGTaGAGCAGGAGTCTGGCACTGTCACTGTGTAATGAG | + |
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Preference number: 6 (lower is better) Translates to: GRQGVAVGACRV*SRSLALSLCNE Trigger: CTCATTACACAGTGACAGTGCCAGACTCCTGCTTCACACCCGGCAAGCCCCCACTGCCACACCCTGCCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS CCA 72 bp | TCCTTCCAGGGACTGTTTTGGATGGGAGCCCGTTCCTaGCCGCCAGACTCAGGTCCTGTTGGCTGTAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SFQGLFWMGARS*PPDSGPVGCRP Trigger: GGGCCTACAGCCAACAGGACCTGAGTCTGGCGGCCAGGAACGGGCTCCCATCCAAAACAGTCCCTGGAAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS CAA 90 bp | GCCTCCAGCCTCGCTTCCAGAGCCCTCTGCTGCTTGCGTACTGCATaGGTCAGCTCTTTCATTGGAGAGACAGGGCTGTCCGGGCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: ASSLASRALCCLRTA*VSSFIGETGLSGPD Trigger: GTCTGGCCCGGACAGCCCTGTCTCTCCAATGAAAGAGCTGACCAATGCAGTACGCAAGCAGCAGAGGGCTCTGGAAGCGAGGCTGGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 ENSMUST00000195177.2 |
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| CDS TCA 72 bp | CCTGAGGAGTGGTGGCCGGGCTGCTGGACTCGCTACTaGGCTCAGAAGACTTCCTGGGCTTCTCATAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: PEEWWPGCWTRY*AQKTSWASHRG Trigger: ACCCCTATGAGAAGCCCAGGAAGTCTTCTGAGCTCAGTAGCGAGTCCAGCAGCCCGGCCACCACTCCTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS GCA 72 bp | CCGCAGGACTGTCCTTTAGTGAGGGTGTGCGCACAATaGGGCTGTGGGAGGGTACCAGTCGCTGGTAACGCA | + |
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Preference number: 6 (lower is better) Translates to: PQDCPLVRVCAQ*GCGRVPVAGNA Trigger: TGCGTTACCAGCGACTGGTACCCTCCCACAGCCGCATTGTGCGCACACCCTCACTAAAGGACAGTCCTGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS CAA 72 bp | TCCAGCTTGTACGCTGCTCCGATCCTGCGCCGGACCTaGGGGGCCTTCTCACCAGGCTTAAGGGGATACTCT | + |
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Preference number: 6 (lower is better) Translates to: SSLYAAPILRRT*GAFSPGLRGYS Trigger: AGAGTATCCCCTTAAGCCTGGTGAGAAGGCCCCCAAGGTCCGGCGCAGGATCGGAGCAGCGTACAAGCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 |
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| CDS GCA 72 bp | TGGCTGATAATCTCTCCGTTCTCAGGCACAAAGACTTaGACTGGGGCCCCGTCCGTCGACCTCCGGAGTACG | + |
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Preference number: 6 (lower is better) Translates to: WLIISPFSGTKT*TGAPSVDLRST Trigger: CGTACTCCGGAGGTCGACGGACGGGGCCCCAGTGCAAGTCTTTGTGCCTGAGAACGGAGAGATTATCAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS CAA 72 bp | TTGGCTGATAATCTCTCCGTTCTCAGGCACAAAGACTaGCACTGGGGCCCCGTCCGTCGACCTCCGGAGTAC | + |
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Preference number: 6 (lower is better) Translates to: LADNLSVLRHKD*HWGPVRRPPEY Trigger: GTACTCCGGAGGTCGACGGACGGGGCCCCAGTGCAAGTCTTTGTGCCTGAGAACGGAGAGATTATCAGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120339.8 |
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| CDS GCA 72 bp | TCTTTCATTGGAGAGACAGGGCTGTCCGGGCCAGACTaGAGGATGATGCCGCTGTCGGAGTCACTGACTTCA | + |
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Preference number: 6 (lower is better) Translates to: SFIGETGLSGPD*RMMPLSESLTS Trigger: TGAAGTCAGTGACTCCGACAGCGGCATCATCCTGCAGTCTGGCCCGGACAGCCCTGTCTCTCCAATGAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 ENSMUST00000195177.2 |
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| CDS GCA 72 bp | CAGCCTCGCTTCCAGAGCCCTCTGCTGCTTGCGTACTaGATTGGTCAGCTCTTTCATTGGAGAGACAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: QPRFQSPLLLAY*IGQLFHWRDRA Trigger: AGCCCTGTCTCTCCAATGAAAGAGCTGACCAATGCAGTACGCAAGCAGCAGAGGGCTCTGGAAGCGAGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 ENSMUST00000195177.2 |
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| CDS GCA 72 bp | AGGCCTCCAGCCTCGCTTCCAGAGCCCTCTGCTGCTTaGGTACTGCATTGGTCAGCTCTTTCATTGGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: RPPASLPEPSAA*VLHWSALSLER Trigger: TCTCTCCAATGAAAGAGCTGACCAATGCAGTACGCAAGCAGCAGAGGGCTCTGGAAGCGAGGCTGGAGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 ENSMUST00000195177.2 |
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| CDS CCA 72 bp | TCGCTTCCAGAGCCCTCTGCTGCTTGCGTACTGCATTaGTCAGCTCTTTCATTGGAGAGACAGGGCTGTCCG | + |
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Preference number: 6 (lower is better) Translates to: SLPEPSAACVLH*SALSLERQGCP Trigger: CGGACAGCCCTGTCTCTCCAATGAAAGAGCTGACCAATGCAGTACGCAAGCAGCAGAGGGCTCTGGAAGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 ENSMUST00000195177.2 |
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| CDS CAA 72 bp | TCTGCTGCTTGCGTACTGCATTGGTCAGCTCTTTCATaGGAGAGACAGGGCTGTCCGGGCCAGACTGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SAACVLHWSALS*ERQGCPGQTAG Trigger: TCCTGCAGTCTGGCCCGGACAGCCCTGTCTCTCCAATGAAAGAGCTGACCAATGCAGTACGCAAGCAGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 ENSMUST00000195177.2 |
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| CDS CAA 72 bp | CTCGCTTCCAGAGCCCTCTGCTGCTTGCGTACTGCATaGGTCAGCTCTTTCATTGGAGAGACAGGGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LASRALCCLRTA*VSSFIGETGLS Trigger: GGACAGCCCTGTCTCTCCAATGAAAGAGCTGACCAATGCAGTACGCAAGCAGCAGAGGGCTCTGGAAGCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000120339.8 ENSMUST00000144464.7 ENSMUST00000150163.8 ENSMUST00000195177.2 |
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