Pregenerated sensors for INA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034336Ensembl transcript IDs: ENSMUST00000037636.4
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGATTTGGCACATGAGGCAGACTGGTCGTGTGGATGCCGCAGTTaGGTGCAGAAAGAGCTGACTTTCCAGCCTGCCTCCGTGAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: PDLAHEADWSCGCRS*VQKELTFQPASVRW Trigger: CCACCTCACGGAGGCAGGCTGGAAAGTCAGCTCTTTCTGCACCCAACTGCGGCATCCACACGACCAGTCTGCCTCATGTGCCAAATCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR CCA 90 bp | TTCCAGCCTGCCTCCGTGAGGTGGGAGAAGTGTGTATACCCCTCCTaGATCCTGAATGTTTCTGCCTTTCCTTTGGGGGAGGGACACCCA | + |
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Preference number: 1 (lower is better) Translates to: FQPASVRWEKCVYPS*ILNVSAFPLGEGHP Trigger: TGGGTGTCCCTCCCCCAAAGGAAAGGCAGAAACATTCAGGATCCAGGAGGGGTATACACACTTCTCCCACCTCACGGAGGCAGGCTGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR GCA 90 bp | GTGAGAAAGCTGTGTTCTTGGAGAACTCCTCCTCTGCTCCAGGACTaGAGCTTGCGCCCGTCTACAGTGGCCTTCCTACTGGAGAACGTA | + |
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Preference number: 1 (lower is better) Translates to: VRKLCSWRTPPLLQD*SLRPSTVAFLLENV Trigger: TACGTTCTCCAGTAGGAAGGCCACTGTAGACGGGCGCAAGCTGCAGTCCTGGAGCAGAGGAGGAGTTCTCCAAGAACACAGCTTTCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR GCA 90 bp | AATGTGAGTTCAACAGATGCGTCATGTCCTTGGCAGCACAGAGCTTaGGATGGAGTGGGCGGGGACAGGACAGACAGTTCCAGAGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: NVSSTDASCPWQHRA*DGVGGDRTDSSRAL Trigger: CAGAGCTCTGGAACTGTCTGTCCTGTCCCCGCCCACTCCATCGCAAGCTCTGTGCTGCCAAGGACATGACGCATCTGTTGAACTCACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR CCA 90 bp | GTGAGCAGAGACAGGGCAAAGCCTGATTTGGCACATGAGGCAGACTaGTCGTGTGGATGCCGCAGTTGGGTGCAGAAAGAGCTGACTTTC | + |
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Preference number: 1 (lower is better) Translates to: VSRDRAKPDLAHEAD*SCGCRSWVQKELTF Trigger: GAAAGTCAGCTCTTTCTGCACCCAACTGCGGCATCCACACGACCAGTCTGCCTCATGTGCCAAATCAGGCTTTGCCCTGTCTCTGCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR GCA 90 bp | TTCCTTGAGCTATTGAAGCACGTGCTAGAATGTGAGTTCAACAGATaGGTCATGTCCTTGGCAGCACAGAGCTTGCGATGGAGTGGGCGG | + |
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Preference number: 1 (lower is better) Translates to: FLELLKHVLECEFNR*VMSLAAQSLRWSGR Trigger: CCGCCCACTCCATCGCAAGCTCTGTGCTGCCAAGGACATGACGCATCTGTTGAACTCACATTCTAGCACGTGCTTCAATAGCTCAAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR TCA 90 bp | GGCGGGGTCCAGTGGATAAACATAGGTTTCCGTTTCAGCTCCCAGTaGGGGATGAGCAGATTTAGCACCTTCATTTGCACTTCCTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: GGVQWINIGFRFSSQ*GMSRFSTFICTSSA Trigger: TGCAGAGGAAGTGCAAATGAAGGTGCTAAATCTGCTCATCCCTCACTGGGAGCTGAAACGGAAACCTATGTTTATCCACTGGACCCCGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR CCA 90 bp | GCGTGGCTAGAAGGGGATGCTACACTAAACTCTGTTCCTTCCTCTTaGGTGCGAGAAAGGAATTATGGGATTGAAGAGTGGAAGGCATGT | + |
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Preference number: 1 (lower is better) Translates to: AWLEGDATLNSVPSS*VRERNYGIEEWKAC Trigger: ACATGCCTTCCACTCTTCAATCCCATAATTCCTTTCTCGCACCCAAGAGGAAGGAACAGAGTTTAGTGTAGCATCCCCTTCTAGCCACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR CCA 90 bp | CCACAGAGTGAAGAAGAGCTAGCTAAAGGGCATACGTTCTATGCGTaGCTAGAAGGGGATGCTACACTAAACTCTGTTCCTTCCTCTTGG | + |
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Preference number: 1 (lower is better) Translates to: PQSEEELAKGHTFYA*LEGDATLNSVPSSW Trigger: CCAAGAGGAAGGAACAGAGTTTAGTGTAGCATCCCCTTCTAGCCACGCATAGAACGTATGCCCTTTAGCTAGCTCTTCTTCACTCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR TCA 90 bp | GTCATGTCCTTGGCAGCACAGAGCTTGCGATGGAGTGGGCGGGGACAGGACAGAGGGTGCAGAAAGAGCTaGCTTTCCAGCCTGCCTCCG | + |
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Preference number: 2 (lower is better) Translates to: VMSLAAQSLRWSGRGQDRGCRKS*LSSLPP Trigger: CGGAGGCAGGCTGGAAAGTCAGCTCTTTCTGCACCC...TCTGTCCTGTCCCCGCCCACTCCATCGCAAGCTCTGTGCTGCCAAGGACATGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR TCA 90 bp | CAGATGCGTCATGTCCTTGGCAGCACAGAGCTTGCGATGGAGTGGGCGGGGACACACTTCCTCTGCACCTaGGTCACCTGTCACCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: QMRHVLGSTELAMEWAGTHFLCT*VTCHQE Trigger: TTCCTGGTGACAGGTGACTCAGGTGCAGAGGAAGTG...TGTCCCCGCCCACTCCATCGCAAGCTCTGTGCTGCCAAGGACATGACGCATCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR CAA 90 bp | TCCAGAGCTCTGGTGGAAGTGAGCAGAGACAGGGCAAAGCCTGATTaGGCACATGAGGCAGACTGGTCGTGTGGATGCCGCAGTTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: SRALVEVSRDRAKPD*AHEADWSCGCRSWV Trigger: CACCCAACTGCGGCATCCACACGACCAGTCTGCCTCATGTGCCAAATCAGGCTTTGCCCTGTCTCTGCTCACTTCCACCAGAGCTCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR TCA 90 bp | CAGATGCGTCATGTCCTTGGCAGCACAGAGCTTGCGATGGAGTGGGCGGGGACAGCTCCCAGTGAGGGATaGGCAGATTTAGCACCTTCA | + |
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Preference number: 2 (lower is better) Translates to: QMRHVLGSTELAMEWAGTAPSEG*ADLAPS Trigger: TGAAGGTGCTAAATCTGCTCATCCCTCACTGGGAGC...TGTCCCCGCCCACTCCATCGCAAGCTCTGTGCTGCCAAGGACATGACGCATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAAAGCCTGATTTGGCACATGAGGCAGACTGGTCGTGTGGATGCCGCAGTTACAGTAAGGTTCTATaGCTGGGGCCTGGCGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: RAKPDLAHEADWSCGCRSYSKVL*LGPGGV Trigger: GACCCCGCCAGGCCCCAGCCATAGAACCTTACTGTA...ACTGCGGCATCCACACGACCAGTCTGCCTCATGTGCCAAATCAGGCTTTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR CAA 90 bp | AAGCTGTGTTCTTGGAGAACTCCTCCTCTGCTCCAGGACTGCAGCTaGCGCCCGTCTACAGTGGCCTTCCTACTGGAGAACGTAAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: KLCSWRTPPLLQDCS*RPSTVAFLLENVRG Trigger: ACCCCTTACGTTCTCCAGTAGGAAGGCCACTGTAGACGGGCGCAAGCTGCAGTCCTGGAGCAGAGGAGGAGTTCTCCAAGAACACAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR TCA 90 bp | GTCATGTCCTTGGCAGCACAGAGCTTGCGATGGAGTGGGCGGGGACAGGACAGAAGCCTGAACTGTGGGTaGGAAAGCTGTGTTCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: VMSLAAQSLRWSGRGQDRSLNCG*ESCVLG Trigger: TCCAAGAACACAGCTTTCTCACCCACAGTTCAGGCT...TCTGTCCTGTCCCCGCCCACTCCATCGCAAGCTCTGTGCTGCCAAGGACATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR GCA 90 bp | CTACGCCACTACATGGAACCCAACACAGAGGAGACCTTGTTCTTCCCCTTCAGACCTCTGCTCCAGGACTaGAGCTTGCGCCCGTCTACA | + |
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Preference number: 2 (lower is better) Translates to: LRHYMEPNTEETLFFPFRPLLQD*SLRPST Trigger: TGTAGACGGGCGCAAGCTGCAGTCCTGGAGCAGAGG...TCTGAAGGGGAAGAACAAGGTCTCCTCTGTGTTGGGTTCCATGTAGTGGCGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR CCA 90 bp | ATGCGTCATGTCCTTGGCAGCACAGAGCTTGCGATGGAGTGGGCGGGGACAGGATATGGGATTGAAGAGTaGAAGGCATGTGCCCATGAG | + |
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Preference number: 2 (lower is better) Translates to: MRHVLGSTELAMEWAGTGYGIEE*KACAHE Trigger: CTCATGGGCACATGCCTTCCACTCTTCAATCCCATA...TCCTGTCCCCGCCCACTCCATCGCAAGCTCTGTGCTGCCAAGGACATGACGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR CAA 90 bp | TTGAAGCACGTGCTAGAATGTGAGTTCAACAGATGCGTCATGTCCTaGGCAGCACAGAGCTTGCGATGGAGTGGGCGGGGACAGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: LKHVLECEFNRCVMS*AAQSLRWSGRGQDR Trigger: TCTGTCCTGTCCCCGCCCACTCCATCGCAAGCTCTGTGCTGCCAAGGACATGACGCATCTGTTGAACTCACATTCTAGCACGTGCTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR CCA 90 bp | ACGCCACTACATGGAACCCAACACAGAGGAGACCTTGTTCTTCCCCTTCAGAGATGCGCCCGTCTACAGTaGCCTTCCTACTGGAGAACG | + |
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Preference number: 2 (lower is better) Translates to: TPLHGTQHRGDLVLPLQRCARLQ*PSYWRT Trigger: CGTTCTCCAGTAGGAAGGCCACTGTAGACGGGCGCA...TCTCTGAAGGGGAAGAACAAGGTCTCCTCTGTGTTGGGTTCCATGTAGTGGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR GCA 90 bp | CTAGAAGGGGATGCTACACTAAACTCTGTTCCTTCCTCTTGGGTGCGAGAAAGGGGAGAACTCCTCCTCTaGTCCAGGACTGCAGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: LEGDATLNSVPSSWVRERGELLL*SRTAAC Trigger: GCAAGCTGCAGTCCTGGAGCAGAGGAGGAGTTCTCC...CCTTTCTCGCACCCAAGAGGAAGGAACAGAGTTTAGTGTAGCATCCCCTTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAAAGCCTGATTTGGCACATGAGGCAGACTGGTCGTGTGGATGCCGCAGTTTCTACGCCACTACATaGAACCCAACACAGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: RAKPDLAHEADWSCGCRSFYATT*NPTQRR Trigger: TCTCCTCTGTGTTGGGTTCCATGTAGTGGCGTAGAA...ACTGCGGCATCCACACGACCAGTCTGCCTCATGTGCCAAATCAGGCTTTGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR TCA 90 bp | ACGCCACTACATGGAACCCAACACAGAGGAGACCTTGTTCTTCCCCTTCAGAGATGTCACCAGGAAGCCTaGACTGTGGGTGAGAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: TPLHGTQHRGDLVLPLQRCHQEA*TVGEKA Trigger: AGCTTTCTCACCCACAGTTCAGGCTTCCTGGTGACA...TCTCTGAAGGGGAAGAACAAGGTCTCCTCTGTGTTGGGTTCCATGTAGTGGCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR GCA 90 bp | GCAGACTGGTCGTGTGGATGCCGCAGTTGGGTGCAGAAAGAGCTGACTTTCCAGTTCCTTCCTCTTGGGTaGGAGAAAGGAATTATGGGA | + |
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Preference number: 2 (lower is better) Translates to: ADWSCGCRSWVQKELTFQFLPLG*EKGIMG Trigger: TCCCATAATTCCTTTCTCGCACCCAAGAGGAAGGAA...CTGGAAAGTCAGCTCTTTCTGCACCCAACTGCGGCATCCACACGACCAGTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR TCA 90 bp | CTAGAAGGGGATGCTACACTAAACTCTGTTCCTTCCTCTTGGGTGCGAGAAAGGCGTTTCAGCTCCCAGTaGGGGATGAGCAGATTTAGC | + |
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Preference number: 2 (lower is better) Translates to: LEGDATLNSVPSSWVRERRFSSQ*GMSRFS Trigger: GCTAAATCTGCTCATCCCTCACTGGGAGCTGAAACG...CCTTTCTCGCACCCAAGAGGAAGGAACAGAGTTTAGTGTAGCATCCCCTTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTGGGTGCGAGAAAGGAATTATGGGATTGAAGAGTGGAAGGCATGTGCCCAGAAAGCTGTGTTCTTaGAGAACTCCTCCTCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: PLGCEKGIMGLKSGRHVPRKLCS*RTPPLL Trigger: GAGCAGAGGAGGAGTTCTCCAAGAACACAGCTTTCT...GGGCACATGCCTTCCACTCTTCAATCCCATAATTCCTTTCTCGCACCCAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR CCA 90 bp | CTACGCCACTACATGGAACCCAACACAGAGGAGACCTTGTTCTTCCCCTTCAGAAGGAAGCCTGAACTGTaGGTGAGAAAGCTGTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: LRHYMEPNTEETLFFPFRRKPEL*VRKLCS Trigger: AGAACACAGCTTTCTCACCCACAGTTCAGGCTTCCT...TCTGAAGGGGAAGAACAAGGTCTCCTCTGTGTTGGGTTCCATGTAGTGGCGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR TCA 90 bp | ATCCTGAATGTTTCTGCCTTTCCTTTGGGGGAGGGACACCCACCAACTGAAGCATTAAAGCTACAGATGTaGAAGGACATGAAATGGGCA | + |
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Preference number: 2 (lower is better) Translates to: ILNVSAFPLGEGHPPTEALKLQM*KDMKWA Trigger: TGCCCATTTCATGTCCTTTCACATCTGTAGCTTTAA...TGCTTCAGTTGGTGGGTGTCCCTCCCCCAAAGGAAAGGCAGAAACATTCAGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR TCA 90 bp | AGTTACACAAATCACAGGGATGGCCAGCATGCAGCTAATTTTACCCACAGAGTGAAGGAATTATGGGATTaGAGAGTGGAAGGCATGTGC | + |
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Preference number: 2 (lower is better) Translates to: SYTNHRDGQHAANFTHRVKELWD*RVEGMC Trigger: GCACATGCCTTCCACTCTTCAATCCCATAATTCCTT...CACTCTGTGGGTAAAATTAGCTGCATGCTGGCCATCCCTGTGATTTGTGTAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR CCA 72 bp | CGTCATGTCCTTGGCAGCACAGAGCTTGCGATGGAGTaGGCGGGGACAGGACAGACAGTTCCAGAGCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: RHVLGSTELAME*AGTGQTVPELW Trigger: CCAGAGCTCTGGAACTGTCTGTCCTGTCCCCGCCCACTCCATCGCAAGCTCTGTGCTGCCAAGGACATGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR GCA 72 bp | CTTGGAGAACTCCTCCTCTGCTCCAGGACTGCAGCTTaGGCCCGTCTACAGTGGCCTTCCTACTGGAGAACG | + |
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Preference number: 3 (lower is better) Translates to: LGELLLCSRTAA*ARLQWPSYWRT Trigger: CGTTCTCCAGTAGGAAGGCCACTGTAGACGGGCGCAAGCTGCAGTCCTGGAGCAGAGGAGGAGTTCTCCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR GCA 72 bp | CTGTGTTCTTGGAGAACTCCTCCTCTGCTCCAGGACTaGAGCTTGCGCCCGTCTACAGTGGCCTTCCTACTG | + |
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Preference number: 3 (lower is better) Translates to: LCSWRTPPLLQD*SLRPSTVAFLL Trigger: CAGTAGGAAGGCCACTGTAGACGGGCGCAAGCTGCAGTCCTGGAGCAGAGGAGGAGTTCTCCAAGAACACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR GCA 72 bp | CCGCAGTTGGGTGCAGAAAGAGCTGACTTTCCAGCCTaGCTCCGTGAGGTGGGAGAAGTGTGTATACCCCTC | + |
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Preference number: 3 (lower is better) Translates to: PQLGAERADFPA*LREVGEVCIPL Trigger: GAGGGGTATACACACTTCTCCCACCTCACGGAGGCAGGCTGGAAAGTCAGCTCTTTCTGCACCCAACTGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR GCA 72 bp | CCTGATTTGGCACATGAGGCAGACTGGTCGTGTGGATaGCGCAGTTGGGTGCAGAAAGAGCTGACTTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: PDLAHEADWSCG*RSWVQKELTFQ Trigger: CTGGAAAGTCAGCTCTTTCTGCACCCAACTGCGGCATCCACACGACCAGTCTGCCTCATGTGCCAAATCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR CCA 72 bp | GCCTCCGTGAGGTGGGAGAAGTGTGTATACCCCTCCTaGATCCTGAATGTTTCTGCCTTTCCTTTGGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: ASVRWEKCVYPS*ILNVSAFPLGE Trigger: CTCCCCCAAAGGAAAGGCAGAAACATTCAGGATCCAGGAGGGGTATACACACTTCTCCCACCTCACGGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR CCA 72 bp | CAGAAAGAGCTGACTTTCCAGCCTGCCTCCGTGAGGTaGGAGAAGTGTGTATACCCCTCCTGGATCCTGAAT | + |
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Preference number: 3 (lower is better) Translates to: QKELTFQPASVR*EKCVYPSWILN Trigger: ATTCAGGATCCAGGAGGGGTATACACACTTCTCCCACCTCACGGAGGCAGGCTGGAAAGTCAGCTCTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR CAA 90 bp | AGAGACAGGGCAAAGCCTGATTTGGCACATGAGGCAGACTGGTCGTGTGGATGCGTCTGGAGCACTAGCTaGTCCTCTGCAGTGATTGTA | + |
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Preference number: 3 (lower is better) Translates to: RDRAKPDLAHEADWSCGCVWSTS*SSAVIV Trigger: TACAATCACTGCAGAGGACAAGCTAGTGCTCCAGAC...GCATCCACACGACCAGTCTGCCTCATGTGCCAAATCAGGCTTTGCCCTGTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR CAA 90 bp | AGGGCAAAGCCTGATTTGGCACATGAGGCAGACTGGTCGTGTGGATGCCGCAGTCTCTGTTCCTTCCTCTaGGGTGCGAGAAAGGAATTA | + |
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Preference number: 3 (lower is better) Translates to: RAKPDLAHEADWSCGCRSLCSFL*GARKEL Trigger: TAATTCCTTTCTCGCACCCAAGAGGAAGGAACAGAG...ACTGCGGCATCCACACGACCAGTCTGCCTCATGTGCCAAATCAGGCTTTGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR-3UTR CAA 90 bp | AGGGCAAAGCCTGATTTGGCACATGAGGCAGACTGGTCGTGTGGATGCCGCAGTAAAGGAATTATGGGATaGAAGAGTGGAAGGCATGTG | + |
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Preference number: 3 (lower is better) Translates to: RAKPDLAHEADWSCGCRSKGIMG*KSGRHV Trigger: CACATGCCTTCCACTCTTCAATCCCATAATTCCTTT...ACTGCGGCATCCACACGACCAGTCTGCCTCATGTGCCAAATCAGGCTTTGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR TCA 72 bp | TTCTGCCTTTCCTTTGGGGGAGGGACACCCACCAACTaGAGCAATGTAACCCTGTTGGGGAAAGACTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: FCLSFGGGTPTN*SNVTLLGKDSE Trigger: TTCAGAGTCTTTCCCCAACAGGGTTACATTGCTTCAGTTGGTGGGTGTCCCTCCCCCAAAGGAAAGGCAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| 3UTR CCA 72 bp | GAAGGGGATGCTACACTAAACTCTGTTCCTTCCTCTTaGGTGCGAGAAAGGAATTATGGGATTGAAGAGTGG | + |
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Preference number: 3 (lower is better) Translates to: EGDATLNSVPSS*VRERNYGIEEW Trigger: CCACTCTTCAATCCCATAATTCCTTTCTCGCACCCAAGAGGAAGGAACAGAGTTTAGTGTAGCATCCCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS-3UTR GCA 90 bp | CTGCAGCTTGCGCCCGTCTACAGTGGCCTTCCTACTGGAGAACGTAAGGGGTCGCGCGCCCGCAGTCGCTaGACCTCCTCGGCCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LQLAPVYSGLPTGERKGSRARSR*TSSASP Trigger: TGGGCTGGCCGAGGAGGTGCAGCGACTGCGGGCGCG...CGACCCCTTACGTTCTCCAGTAGGAAGGCCACTGTAGACGGGCGCAAGCTGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS-3UTR GCA 90 bp | TTGGGTGCAGAAAGAGCTGACTTTCCAGCCTGCCTCCGTGAGGTGGGAGAAGTGCCGTCCACGTCGCGCTaGTGCGCCTTCAGGGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: LGAERADFPACLREVGEVPSTSR*CAFRAR Trigger: GCGCGCCCTGAAGGCGCAGCAGCGCGACGTGGACGG...CACTTCTCCCACCTCACGGAGGCAGGCTGGAAAGTCAGCTCTTTCTGCACCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS-3UTR CCA 90 bp | ATGCGTCATGTCCTTGGCAGCACAGAGCTTGCGATGGAGTGGGCGGGGACAGGACTCGGCTGGCTCGGATaGCTTCGGTGCTGCGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: MRHVLGSTELAMEWAGTGLGWLG*LRCCAQ Trigger: CTGCGCGCAGCACCGAAGCCATCCGAGCCAGCCGAG...TCCTGTCCCCGCCCACTCCATCGCAAGCTCTGTGCTGCCAAGGACATGACGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS-3UTR GCA 90 bp | AGAGACAGGGCAAAGCCTGATTTGGCACATGAGGCAGACTGGTCGTGTGGATGCACTGCGAGCGGAAGCTaGCCGAGCCTCCCGGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: RDRAKPDLAHEADWSCGCTASGS*PSLPAR Trigger: CCGGGCCGGGAGGCTCGGGCAGCTTCCGCTCGCAGT...GCATCCACACGACCAGTCTGCCTCATGTGCCAAATCAGGCTTTGCCCTGTCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS-3UTR GCA 90 bp | GCTCCAGGACTGCAGCTTGCGCCCGTCTACAGTGGCCTTCCTACTGGAGAACGTCCGTGGAGGCCACATTaGTGCGGGACAGCGACTGCG | + |
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Preference number: 4 (lower is better) Translates to: APGLQLAPVYSGLPTGERPWRPH*CGTATA Trigger: CGCAGTCGCTGTCCCGCAGCAATGTGGCCTCCACGG...ACGTTCTCCAGTAGGAAGGCCACTGTAGACGGGCGCAAGCTGCAGTCCTGGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS-3UTR GCA 90 bp | CTGGTGGAAGTGAGCAGAGACAGGGCAAAGCCTGATTTGGCACATGAGGCAGACCTCGCCTCCTCCAGCTaGGCGCGCAGCTCGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LVEVSRDRAKPDLAHEADLASSS*ARSSRS Trigger: GCTGCGCGAGCTGCGCGCGCAGCTGGAGGAGGCGAG...GTCTGCCTCATGTGCCAAATCAGGCTTTGCCCTGTCTCTGCTCACTTCCACCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS-3UTR GCA 90 bp | CAGATGCGTCATGTCCTTGGCAGCACAGAGCTTGCGATGGAGTGGGCGGGGACATGGAGGCCACATTGCTaGGGGACAGCGACTGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QMRHVLGSTELAMEWAGTWRPHC*GTATAS Trigger: GCTCGCAGTCGCTGTCCCGCAGCAATGTGGCCTCCA...TGTCCCCGCCCACTCCATCGCAAGCTCTGTGCTGCCAAGGACATGACGCATCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR GCA 90 bp | ATGCGTCATGTCCTTGGCAGCACAGAGCTTGCGATGGAGTGGGCGGGGACAGGATCGAGCGCACGGTTCTaGGTCTCCAGCTGGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: MRHVLGSTELAMEWAGTGSSARF*VSSWCT Trigger: GGTGCACCAGCTGGAGACGCAGAACCGTGCGCTCGA...TCCTGTCCCCGCCCACTCCATCGCAAGCTCTGTGCTGCCAAGGACATGACGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CCA 90 bp | CTGGTGGAAGTGAGCAGAGACAGGGCAAAGCCTGATTTGGCACATGAGGCAGACAGGAGCAGGCGGCCGTaGAGGCCACATTGCTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVEVSRDRAKPDLAHEADRSRRP*RPHCCG Trigger: CCCGCAGCAATGTGGCCTCCACGGCCGCCTGCTCCT...GTCTGCCTCATGTGCCAAATCAGGCTTTGCCCTGTCTCTGCTCACTTCCACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR GCA 90 bp | ACGCCACTACATGGAACCCAACACAGAGGAGACCTTGTTCTTCCCCTTCAGAGATCCACGTCGCGCTGCTaGGCCTTCAGGGCGCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TPLHGTQHRGDLVLPLQRSTSRC*AFRARS Trigger: CGAGCGCGCCCTGAAGGCGCAGCAGCGCGACGTGGA...TCTCTGAAGGGGAAGAACAAGGTCTCCTCTGTGTTGGGTTCCATGTAGTGGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CCA 90 bp | CATGAGGCAGACTGGTCGTGTGGATGCCGCAGTTGGGTGCAGAAAGAGCTGACTTCCTCGTCGTGGACCTaGCGCACGAAAGCCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HEADWSCGCRSWVQKELTSSSWT*RTKASS Trigger: CGAGCTGGCTTTCGTGCGCCAGGTCCACGACGAGGA...AGTCAGCTCTTTCTGCACCCAACTGCGGCATCCACACGACCAGTCTGCCTCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CCA 90 bp | CATGAGGCAGACTGGTCGTGTGGATGCCGCAGTTGGGTGCAGAAAGAGCTGACTGTACGTGCCTGGAGCTaGCGCCGGTACTCGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HEADWSCGCRSWVQKELTVRAWS*RRYSWI Trigger: GATCCACGAGTACCGGCGCCAGCTCCAGGCACGTAC...AGTCAGCTCTTTCTGCACCCAACTGCGGCATCCACACGACCAGTCTGCCTCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR GCA 90 bp | ATCCTGAATGTTTCTGCCTTTCCTTTGGGGGAGGGACACCCACCAACTGAAGCACTGCGGGACAGCGACTaGGAGCGGAAGCTGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILNVSAFPLGEGHPPTEALRDSD*ERKLPE Trigger: CTCGGGCAGCTTCCGCTCGCAGTCGCTGTCCCGCAG...TGCTTCAGTTGGTGGGTGTCCCTCCCCCAAAGGAAAGGCAGAAACATTCAGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR GCA 90 bp | CTGGTGGAAGTGAGCAGAGACAGGGCAAAGCCTGATTTGGCACATGAGGCAGACCACTCCTCGGCGGACTaGAGGTTCTTAGCGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVEVSRDRAKPDLAHEADHSSAD*RFLAAR Trigger: CCTGGCCGCTAAGAACCTGCAGTCCGCCGAGGAGTG...GTCTGCCTCATGTGCCAAATCAGGCTTTGCCCTGTCTCTGCTCACTTCCACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR GCA 90 bp | AGGGCAAAGCCTGATTTGGCACATGAGGCAGACTGGTCGTGTGGATGCCGCAGTGGATGGCTTCGGTGCTaGGCGCAGCCTGCTCGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RAKPDLAHEADWSCGCRSGWLRC*AQPARL Trigger: TAAACGAGCAGGCTGCGCGCAGCACCGAAGCCATCC...ACTGCGGCATCCACACGACCAGTCTGCCTCATGTGCCAAATCAGGCTTTGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR GCA 90 bp | CCTGAGTCACCTGTCACCAGGAAGCCTGAACTGTGGGTGAGAAAGCTGTGTTCTGCCACCTCAGCGCTGTaGCGCTCCTCCAGTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PESPVTRKPELWVRKLCSATSAL*RSSSSK Trigger: CTTGGAACTGGAGGAGCGGCACAGCGCTGAGGTGGC...AGAACACAGCTTTCTCACCCACAGTTCAGGCTTCCTGGTGACAGGTGACTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CCA 90 bp | GTGCGAGAAAGGAATTATGGGATTGAAGAGTGGAAGGCATGTGCCCATGAGAGATCGCGCAGCTCGCGCTaGAAGAGCTCGCCGACGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VRERNYGIEEWKACAHERSRSSR*KSSPTR Trigger: GCGCGTCGGCGAGCTCTTCCAGCGCGAGCTGCGCGA...TCTCTCATGGGCACATGCCTTCCACTCTTCAATCCCATAATTCCTTTCTCGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| 3UTR CAA 72 bp | TCTTGGAGAACTCCTCCTCTGCTCCAGGACTGCAGCTaGCGCCCGTCTACAGTGGCCTTCCTACTGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SWRTPPLLQDCS*RPSTVAFLLEN Trigger: GTTCTCCAGTAGGAAGGCCACTGTAGACGGGCGCAAGCTGCAGTCCTGGAGCAGAGGAGGAGTTCTCCAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| 3UTR CAA 72 bp | CTGGTGGAAGTGAGCAGAGACAGGGCAAAGCCTGATTaGGCACATGAGGCAGACTGGTCGTGTGGATGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LVEVSRDRAKPD*AHEADWSCGCR Trigger: GCGGCATCCACACGACCAGTCTGCCTCATGTGCCAAATCAGGCTTTGCCCTGTCTCTGCTCACTTCCACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR GCA 90 bp | CTACGCCACTACATGGAACCCAACACAGAGGAGACCTTGTTCTTCCCCTTCAGATGTCCCCGAACACCTTaGGGTAGGAGGAGGCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRHYMEPNTEETLFFPFRCPRTP*GRRRRS Trigger: GCTCCGCCTCCTCCTACCGCAAGGTGTTCGGGGACA...TCTGAAGGGGAAGAACAAGGTCTCCTCTGTGTTGGGTTCCATGTAGTGGCGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CCA 90 bp | CTGCAGCTTGCGCCCGTCTACAGTGGCCTTCCTACTGGAGAACGTAAGGGGTCGACATTGAGCAAGTCCTaGTATTCCCGAAGGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LQLAPVYSGLPTGERKGSTLSKS*YSRRWR Trigger: ACGCCACCTTCGGGAATACCAGGACTTGCTCAATGT...CGACCCCTTACGTTCTCCAGTAGGAAGGCCACTGTAGACGGGCGCAAGCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR GCA 90 bp | AGAGACAGGGCAAAGCCTGATTTGGCACATGAGGCAGACTGGTCGTGTGGATGCTGCGTCTCCAGCTGGTaGACCTTCTCGATGAACACG | + |
|
Preference number: 4 (lower is better) Translates to: RDRAKPDLAHEADWSCGCCVSSW*TFSMNT Trigger: CGTGTTCATCGAGAAGGTGCACCAGCTGGAGACGCA...GCATCCACACGACCAGTCTGCCTCATGTGCCAAATCAGGCTTTGCCCTGTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR GCA 90 bp | CTAGAAGGGGATGCTACACTAAACTCTGTTCCTTCCTCTTGGGTGCGAGAAAGGGCCAGGGACTCATACTaGGCGCGGATCTCCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEGDATLNSVPSSWVRERARDSY*ARISLS Trigger: GCTGAGGGAGATCCGCGCGCAGTATGAGTCCCTGGC...CCTTTCTCGCACCCAAGAGGAAGGAACAGAGTTTAGTGTAGCATCCCCTTCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CCA 90 bp | ATCCTGAATGTTTCTGCCTTTCCTTTGGGGGAGGGACACCCACCAACTGAAGCATCAATGGTACGTGCCTaGAGCTGGCGCCGGTACTCG | + |
|
Preference number: 4 (lower is better) Translates to: ILNVSAFPLGEGHPPTEASMVRA*SWRRYS Trigger: CGAGTACCGGCGCCAGCTCCAGGCACGTACCATTGA...TGCTTCAGTTGGTGGGTGTCCCTCCCCCAAAGGAAAGGCAGAAACATTCAGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CCA 90 bp | GCAGACTGGTCGTGTGGATGCCGCAGTTGGGTGCAGAAAGAGCTGACTTTCCAGGCAAATAACTGGGATTaGGCAGTGGATTCAGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ADWSCGCRSWVQKELTFQANNWD*AVDSAP Trigger: CGGGGCTGAATCCACTGCCCAATCCCAGTTATTTGC...CTGGAAAGTCAGCTCTTTCTGCACCCAACTGCGGCATCCACACGACCAGTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| 3UTR CAA 72 bp | GTGCTAGAATGTGAGTTCAACAGATGCGTCATGTCCTaGGCAGCACAGAGCTTGCGATGGAGTGGGCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLECEFNRCVMS*AAQSLRWSGRG Trigger: TCCCCGCCCACTCCATCGCAAGCTCTGTGCTGCCAAGGACATGACGCATCTGTTGAACTCACATTCTAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR GCA 90 bp | CTAGAAGGGGATGCTACACTAAACTCTGTTCCTTCCTCTTGGGTGCGAGAAAGGGTGCTGCGCGCAGCCTaGTCGTTTAGGTTGGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LEGDATLNSVPSSWVRERVLRAA*SFRLAN Trigger: GTTCGCCAACCTAAACGAGCAGGCTGCGCGCAGCAC...CCTTTCTCGCACCCAAGAGGAAGGAACAGAGTTTAGTGTAGCATCCCCTTCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CCA 90 bp | AAAGGAATTATGGGATTGAAGAGTGGAAGGCATGTGCCCATGAGAGACGTGTGTGCCACCTCCTCGTCGTaGACCTGGCGCACGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KGIMGLKSGRHVPMRDVCATSSS*TWRTKA Trigger: GGCTTTCGTGCGCCAGGTCCACGACGAGGAGGTGGC...ACACACGTCTCTCATGGGCACATGCCTTCCACTCTTCAATCCCATAATTCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CCA 90 bp | AGGGCAAAGCCTGATTTGGCACATGAGGCAGACTGGTCGTGTGGATGCCGCAGTTGGTATTCCCGAAGGTaGCGTGCCATCTCGCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RAKPDLAHEADWSCGCRSWYSRR*RAISLF Trigger: AAAAAGCGAGATGGCACGCCACCTTCGGGAATACCA...ACTGCGGCATCCACACGACCAGTCTGCCTCATGTGCCAAATCAGGCTTTGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CCA 90 bp | CTACGCCACTACATGGAACCCAACACAGAGGAGACCTTGTTCTTCCCCTTCAGAACTGGGATTGGGCAGTaGATTCAGCCCCGAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRHYMEPNTEETLFFPFRTGIGQ*IQPRDA Trigger: AGCATCTCGGGGCTGAATCCACTGCCCAATCCCAGT...TCTGAAGGGGAAGAACAAGGTCTCCTCTGTGTTGGGTTCCATGTAGTGGCGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CCA 90 bp | TTGGGTGCAGAAAGAGCTGACTTTCCAGCCTGCCTCCGTGAGGTGGGAGAAGTGGAGGGAGCAAATAACTaGGATTGGGCAGTGGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGAERADFPACLREVGEVEGANN*DWAVDS Trigger: TGAATCCACTGCCCAATCCCAGTTATTTGCTCCCTC...CACTTCTCCCACCTCACGGAGGCAGGCTGGAAAGTCAGCTCTTTCTGCACCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR GCA 90 bp | CTACGCCACTACATGGAACCCAACACAGAGGAGACCTTGTTCTTCCCCTTCAGATTCCCGAAGGTGGCGTaGCATCTCGCTTTTTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LRHYMEPNTEETLFFPFRFPKVA*HLAFCV Trigger: AACACAAAAAGCGAGATGGCACGCCACCTTCGGGAA...TCTGAAGGGGAAGAACAAGGTCTCCTCTGTGTTGGGTTCCATGTAGTGGCGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CCA 90 bp | ACGCCACTACATGGAACCCAACACAGAGGAGACCTTGTTCTTCCCCTTCAGAGATTAGGTTGGCGAACTTaGACTTGTACCACTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TPLHGTQHRGDLVLPLQRLGWRT*TCTTPR Trigger: CCGAGGAGTGGTACAAGTCCAAGTTCGCCAACCTAA...TCTCTGAAGGGGAAGAACAAGGTCTCCTCTGTGTTGGGTTCCATGTAGTGGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CCA 90 bp | CTACGCCACTACATGGAACCCAACACAGAGGAGACCTTGTTCTTCCCCTTCAGACCTGCTCGTTTAGGTTaGCGAACTTGGACTTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LRHYMEPNTEETLFFPFRPARLG*RTWTCT Trigger: GGTACAAGTCCAAGTTCGCCAACCTAAACGAGCAGG...TCTGAAGGGGAAGAACAAGGTCTCCTCTGTGTTGGGTTCCATGTAGTGGCGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| 3UTR CAA 72 bp | TTCCTTCCTCTTGGGTGCGAGAAAGGAATTATGGGATaGAAGAGTGGAAGGCATGTGCCCATGAGAGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLPLGCEKGIMG*KSGRHVPMRDV Trigger: CACGTCTCTCATGGGCACATGCCTTCCACTCTTCAATCCCATAATTCCTTTCTCGCACCCAAGAGGAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| 3UTR CAA 72 bp | AGGAAAAGCAAAGTGTCTTTTCGGTTCCTTGAGCTATaGAAGCACGTGCTAGAATGTGAGTTCAACAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RKSKVSFRFLEL*KHVLECEFNRC Trigger: GCATCTGTTGAACTCACATTCTAGCACGTGCTTCAATAGCTCAAGGAACCGAAAAGACACTTTGCTTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS CCA 90 bp | TCGCGCTGGAAGAGCTCGCCGACGCGCGACGGCTCGGCGTGGCGCTaGCGCAGCGCGGCCAGCTCGGCCTCGAGCGCACGGTTCTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRWKSSPTRDGSAWR*RSAASSASSARFCV Trigger: GACGCAGAACCGTGCGCTCGAGGCCGAGCTGGCCGCGCTGCGCCAGCGCCACGCCGAGCCGTCGCGCGTCGGCGAGCTCTTCCAGCGCGA 77% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS GCA 90 bp | GAGGAGCAGGCGGCCGTGGAGGCCACATTGCTGCGGGACAGCGACTaGGAGCGGAAGCTGCCCGAGCCTCCCGGCCCGGACAGGCGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: EEQAAVEATLLRDSD*ERKLPEPPGPDRRA Trigger: CGCGCGCCTGTCCGGGCCGGGAGGCTCGGGCAGCTTCCGCTCGCAGTCGCTGTCCCGCAGCAATGTGGCCTCCACGGCCGCCTGCTCCTC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS GCA 90 bp | GTCAGGTCTGGTTTAGCCACGGCCACGTCCACCTCGGCGGCGGCTTaGGAAGACGCCTGCAACGTGGCCAGGAGCTCGGCCACCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VRSGLATATSTSAAA*EDACNVARSSATSS Trigger: CGAGGAGGTGGCCGAGCTCCTGGCCACGTTGCAGGCGTCTTCGCAAGCCGCCGCCGAGGTGGACGTGGCCGTGGCTAAACCAGACCTGAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS GCA 90 bp | GCCCGGACAGGCGCGCGGAGAGGCGCGAGCTGTCCCCGAACACCTTaGGGTAGGAGGAGGCGGAGCACAAATAGTGCTCCGATCCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ARTGARRGASCPRTP*GRRRRSTNSAPIRS Trigger: GCTTCGGATCGGAGCACTATTTGTGCTCCGCCTCCTCCTACCGCAAGGTGTTCGGGGACAGCTCGCGCCTCTCCGCGCGCCTGTCCGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS GCA 90 bp | ATCTCCTCTCGGCTGGCTCGGATGGCTTCGGTGCTGCGCGCAGCCTaGTCGTTTAGGTTGGCGAACTTGGACTTGTACCACTCCTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ISSRLARMASVLRAA*SFRLANLDLYHSSA Trigger: CGCCGAGGAGTGGTACAAGTCCAAGTTCGCCAACCTAAACGAGCAGGCTGCGCGCAGCACCGAAGCCATCCGAGCCAGCCGAGAGGAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS GCA 90 bp | GCCGGTACTCGTGGATCTCCTCTCGGCTGGCTCGGATGGCTTCGGTaGTGCGCGCAGCCTGCTCGTTTAGGTTGGCGAACTTGGACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AGTRGSPLGWLGWLR*CAQPARLGWRTWTC Trigger: ACAAGTCCAAGTTCGCCAACCTAAACGAGCAGGCTGCGCGCAGCACCGAAGCCATCCGAGCCAGCCGAGAGGAGATCCACGAGTACCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CAA 90 bp | CAGATGCGTCATGTCCTTGGCAGCACAGAGCTTGCGATGGAGTGGGCGGGGACAATGATCTTGTACTCGTaGGTGCGCGCCGCCGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QMRHVLGSTELAMEWAGTMILYS*VRAAAW Trigger: CCAGGCGGCGGCGCGCACCAACGAGTACAAGATCAT...TGTCCCCGCCCACTCCATCGCAAGCTCTGTGCTGCCAAGGACATGACGCATCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS GCA 90 bp | GGTACTCGTGGATCTCCTCTCGGCTGGCTCGGATGGCTTCGGTGCTaGGCGCAGCCTGCTCGTTTAGGTTGGCGAACTTGGACTTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: GTRGSPLGWLGWLRC*AQPARLGWRTWTCT Trigger: GGTACAAGTCCAAGTTCGCCAACCTAAACGAGCAGGCTGCGCGCAGCACCGAAGCCATCCGAGCCAGCCGAGAGGAGATCCACGAGTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CAA 90 bp | ATCCTGAATGTTTCTGCCTTTCCTTTGGGGGAGGGACACCCACCAACTGAAGCAGCCGTGGAGGCCACATaGCTGCGGGACAGCGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: ILNVSAFPLGEGHPPTEAAVEAT*LRDSDC Trigger: GCAGTCGCTGTCCCGCAGCAATGTGGCCTCCACGGC...TGCTTCAGTTGGTGGGTGTCCCTCCCCCAAAGGAAAGGCAGAAACATTCAGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CAA 90 bp | GCAGACTGGTCGTGTGGATGCCGCAGTTGGGTGCAGAAAGAGCTGACTTTCCAGTTGGCGAACTTGGACTaGTACCACTCCTCGGCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ADWSCGCRSWVQKELTFQLANLD*YHSSAD Trigger: GTCCGCCGAGGAGTGGTACAAGTCCAAGTTCGCCAA...CTGGAAAGTCAGCTCTTTCTGCACCCAACTGCGGCATCCACACGACCAGTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CAA 90 bp | AGAGACAGGGCAAAGCCTGATTTGGCACATGAGGCAGACTGGTCGTGTGGATGCTTAGTGCGGATGATCTaGTACTCGTTGGTGCGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RDRAKPDLAHEADWSCGCLVRMI*YSLVRA Trigger: GGCGCGCACCAACGAGTACAAGATCATCCGCACTAA...GCATCCACACGACCAGTCTGCCTCATGTGCCAAATCAGGCTTTGCCCTGTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CAA 90 bp | AGGGCAAAGCCTGATTTGGCACATGAGGCAGACTGGTCGTGTGGATGCCGCAGTGCCTGCTCGTTTAGGTaGGCGAACTTGGACTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RAKPDLAHEADWSCGCRSACSFR*ANLDLY Trigger: GTACAAGTCCAAGTTCGCCAACCTAAACGAGCAGGC...ACTGCGGCATCCACACGACCAGTCTGCCTCATGTGCCAAATCAGGCTTTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CAA 90 bp | CCTGAGTCACCTGTCACCAGGAAGCCTGAACTGTGGGTGAGAAAGCTGTGTTCTTTTAGGTTGGCGAACTaGGACTTGTACCACTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PESPVTRKPELWVRKLCSFRLAN*DLYHSS Trigger: CGAGGAGTGGTACAAGTCCAAGTTCGCCAACCTAAA...AGAACACAGCTTTCTCACCCACAGTTCAGGCTTCCTGGTGACAGGTGACTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS-3UTR CAA 90 bp | ACGCCACTACATGGAACCCAACACAGAGGAGACCTTGTTCTTCCCCTTCAGAGAGTGCCATCTCGCTTTTaGTGTTCCTCAGGTCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: TPLHGTQHRGDLVLPLQRVPSRF*CSSGHF Trigger: AAAGTGACCTGAGGAACACAAAAAGCGAGATGGCAC...TCTCTGAAGGGGAAGAACAAGGTCTCCTCTGTGTTGGGTTCCATGTAGTGGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS CCA 72 bp | AAGAGCTCGCCGACGCGCGACGGCTCGGCGTGGCGCTaGCGCAGCGCGGCCAGCTCGGCCTCGAGCGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: KSSPTRDGSAWR*RSAASSASSAR Trigger: CCGTGCGCTCGAGGCCGAGCTGGCCGCGCTGCGCCAGCGCCACGCCGAGCCGTCGCGCGTCGGCGAGCTCTT 79% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS CCA 72 bp | CGCTGGAAGAGCTCGCCGACGCGCGACGGCTCGGCGTaGCGCTGGCGCAGCGCGGCCAGCTCGGCCTCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RWKSSPTRDGSA*RWRSAASSASS Trigger: GCTCGAGGCCGAGCTGGCCGCGCTGCGCCAGCGCCACGCCGAGCCGTCGCGCGTCGGCGAGCTCTTCCAGCG 79% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
||
| CDS GCA 72 bp | CCGCGGCTCTCCTCCTCGCAGCGCGCCCGCAGTCGCTaGACCTCCTCGGCCAGCCCATCGCGCTCCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PRLSSSQRARSR*TSSASPSRSSR Trigger: CCTGCTGGAGCGCGATGGGCTGGCCGAGGAGGTGCAGCGACTGCGGGCGCGCTGCGAGGAGGAGAGCCGCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS GCA 72 bp | GCGGCCGTGGAGGCCACATTGCTGCGGGACAGCGACTaGGAGCGGAAGCTGCCCGAGCCTCCCGGCCCGGAC | + |
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Preference number: 6 (lower is better) Translates to: AAVEATLLRDSD*ERKLPEPPGPD Trigger: GTCCGGGCCGGGAGGCTCGGGCAGCTTCCGCTCGCAGTCGCTGTCCCGCAGCAATGTGGCCTCCACGGCCGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS GCA 72 bp | AGGCCGAGGAGCAGGCGGCCGTGGAGGCCACATTGCTaGGGGACAGCGACTGCGAGCGGAAGCTGCCCGAGC | + |
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Preference number: 6 (lower is better) Translates to: RPRSRRPWRPHC*GTATASGSCPS Trigger: GCTCGGGCAGCTTCCGCTCGCAGTCGCTGTCCCGCAGCAATGTGGCCTCCACGGCCGCCTGCTCCTCGGCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS GCA 72 bp | ACGAGGCCGAGGAGCAGGCGGCCGTGGAGGCCACATTaGTGCGGGACAGCGACTGCGAGCGGAAGCTGCCCG | + |
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Preference number: 6 (lower is better) Translates to: TRPRSRRPWRPH*CGTATASGSCP Trigger: CGGGCAGCTTCCGCTCGCAGTCGCTGTCCCGCAGCAATGTGGCCTCCACGGCCGCCTGCTCCTCGGCCTCGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS CCA 72 bp | CGGATGATCTTGTACTCGTTGGTGCGCGCCGCCGCCTaGCTCAGGTCCAGCCCGTCGGAGGCCGGCAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: RMILYSLVRAAA*LRSSPSEAGRR Trigger: CCGCCTGCCGGCCTCCGACGGGCTGGACCTGAGCCAGGCGGCGGCGCGCACCAACGAGTACAAGATCATCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS GCA 72 bp | GGTTTAGCCACGGCCACGTCCACCTCGGCGGCGGCTTaGGAAGACGCCTGCAACGTGGCCAGGAGCTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: GLATATSTSAAA*EDACNVARSSA Trigger: GGCCGAGCTCCTGGCCACGTTGCAGGCGTCTTCGCAAGCCGCCGCCGAGGTGGACGTGGCCGTGGCTAAACC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS CAA 72 bp | TGGTTTAGCCACGGCCACGTCCACCTCGGCGGCGGCTaGCGAAGACGCCTGCAACGTGGCCAGGAGCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: WFSHGHVHLGGG*RRRLQRGQELG Trigger: GCCGAGCTCCTGGCCACGTTGCAGGCGTCTTCGCAAGCCGCCGCCGAGGTGGACGTGGCCGTGGCTAAACCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS CAA 90 bp | AGTCAGGTCTGGTTTAGCCACGGCCACGTCCACCTCGGCGGCGGCTaGCGAAGACGCCTGCAACGTGGCCAGGAGCTCGGCCACCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SQVWFSHGHVHLGGG*RRRLQRGQELGHLL Trigger: GAGGAGGTGGCCGAGCTCCTGGCCACGTTGCAGGCGTCTTCGCAAGCCGCCGCCGAGGTGGACGTGGCCGTGGCTAAACCAGACCTGACT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS GCA 72 bp | GGCGCGCGGAGAGGCGCGAGCTGTCCCCGAACACCTTaGGGTAGGAGGAGGCGGAGCACAAATAGTGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: GARRGASCPRTP*GRRRRSTNSAP Trigger: CGGAGCACTATTTGTGCTCCGCCTCCTCCTACCGCAAGGTGTTCGGGGACAGCTCGCGCCTCTCCGCGCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS CCA 72 bp | GCCGGTACTCGTGGATCTCCTCTCGGCTGGCTCGGATaGCTTCGGTGCTGCGCGCAGCCTGCTCGTTTAGGT | + |
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Preference number: 6 (lower is better) Translates to: AGTRGSPLGWLG*LRCCAQPARLG Trigger: ACCTAAACGAGCAGGCTGCGCGCAGCACCGAAGCCATCCGAGCCAGCCGAGAGGAGATCCACGAGTACCGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS GCA 72 bp | GGATCTCCTCTCGGCTGGCTCGGATGGCTTCGGTGCTaGGCGCAGCCTGCTCGTTTAGGTTGGCGAACTTGG | + |
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Preference number: 6 (lower is better) Translates to: GSPLGWLGWLRC*AQPARLGWRTW Trigger: CCAAGTTCGCCAACCTAAACGAGCAGGCTGCGCGCAGCACCGAAGCCATCCGAGCCAGCCGAGAGGAGATCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS GCA 72 bp | CGTGGATCTCCTCTCGGCTGGCTCGGATGGCTTCGGTaGTGCGCGCAGCCTGCTCGTTTAGGTTGGCGAACT | + |
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Preference number: 6 (lower is better) Translates to: RGSPLGWLGWLR*CAQPARLGWRT Trigger: AGTTCGCCAACCTAAACGAGCAGGCTGCGCGCAGCACCGAAGCCATCCGAGCCAGCCGAGAGGAGATCCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS GCA 72 bp | CGGCTGGCTCGGATGGCTTCGGTGCTGCGCGCAGCCTaGTCGTTTAGGTTGGCGAACTTGGACTTGTACCAC | + |
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Preference number: 6 (lower is better) Translates to: RLARMASVLRAA*SFRLANLDLYH Trigger: GTGGTACAAGTCCAAGTTCGCCAACCTAAACGAGCAGGCTGCGCGCAGCACCGAAGCCATCCGAGCCAGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS CCA 72 bp | TGGCTTCGGTGCTGCGCGCAGCCTGCTCGTTTAGGTTaGCGAACTTGGACTTGTACCACTCCTCGGCGGACT | + |
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Preference number: 6 (lower is better) Translates to: WLRCCAQPARLG*RTWTCTTPRRT Trigger: AGTCCGCCGAGGAGTGGTACAAGTCCAAGTTCGCCAACCTAAACGAGCAGGCTGCGCGCAGCACCGAAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS CAA 72 bp | ATGGCTTCGGTGCTGCGCGCAGCCTGCTCGTTTAGGTaGGCGAACTTGGACTTGTACCACTCCTCGGCGGAC | + |
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Preference number: 6 (lower is better) Translates to: MASVLRAACSFR*ANLDLYHSSAD Trigger: GTCCGCCGAGGAGTGGTACAAGTCCAAGTTCGCCAACCTAAACGAGCAGGCTGCGCGCAGCACCGAAGCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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| CDS CAA 72 bp | TCCTCCTTTTTCAGGGACAGCCCGGCAGAGGAGACTTaGGAGGCTGTAGAGCTAAGGATTCTGGGAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SSFFRDSPAEET*EAVELRILGGS Trigger: GCTCCCTCCCAGAATCCTTAGCTCTACAGCCTCCAAAGTCTCCTCTGCCGGGCTGTCCCTGAAAAAGGAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037636.4 |
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