RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IMPG2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035270

Ensembl transcript IDs: ENSMUST00000069936.8, ENSMUST00000160116.8

Found 312 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TATGTTTGGCCCAGGGAGTGGCACTATTTGAAAGTATGGCCTTGTTaGAGTAGGTGTGGCCTTGTTAGAGTAGGTGTGTCACTGTGGGCA +
Preference number: 1 (lower is better)
Translates to: YVWPREWHYLKVWPC*SRCGLVRVGVSLWA
Trigger: TGCCCACAGTGACACACCTACTCTAACAAGGCCACACCTACTCCAACAAGGCCATACTTTCAAATAGTGCCACTCCCTGGGCCAAACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR TCA 90 bp CTTCCTTTAGATGAAGATGAAGAACTCTCAGCTCCTCCAGTGCCTTaGCTGCCTGGATGCTGCCATGCTTCCAGCTTTGATGATAATGGA +
Preference number: 1 (lower is better)
Translates to: LPLDEDEELSAPPVP*LPGCCHASSFDDNG
Trigger: TCCATTATCATCAAAGCTGGAAGCATGGCAGCATCCAGGCAGTCAAGGCACTGGAGGAGCTGAGAGTTCTTCATCTTCATCTAAAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR CCA 90 bp TGGTGTAAATATGTTTGGCCCAGGGAGTGGCACTATTTGAAAGTATaGCCTTGTTGGAGTAGGTGTGGCCTTGTTAGAGTAGGTGTGTCA +
Preference number: 1 (lower is better)
Translates to: WCKYVWPREWHYLKV*PCWSRCGLVRVGVS
Trigger: TGACACACCTACTCTAACAAGGCCACACCTACTCCAACAAGGCCATACTTTCAAATAGTGCCACTCCCTGGGCCAAACATATTTACACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR CCA 90 bp GTTGAGAGACGTGTTTTAGTCAGTGGCTTAGTATCCAGTGGGGAGTaGCTTCACTTGTCTCTTGTTGACTTATTAGAACAGTCTACACAT +
Preference number: 1 (lower is better)
Translates to: VERRVLVSGLVSSGE*LHLSLVDLLEQSTH
Trigger: ATGTGTAGACTGTTCTAATAAGTCAACAAGAGACAAGTGAAGCCACTCCCCACTGGATACTAAGCCACTGACTAAAACACGTCTCTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR CCA 90 bp GACAGGAGTTTGAAGAAGAAACCACAAAGGAAAGTGCTTATTGGCTaGCTTCTTGTAGCTGGCTTTACCTTTCTTTTGCAACTTAACTCC +
Preference number: 1 (lower is better)
Translates to: DRSLKKKPQRKVLIG*LLVAGFTFLLQLNS
Trigger: GGAGTTAAGTTGCAAAAGAAAGGTAAAGCCAGCTACAAGAAGCCAGCCAATAAGCACTTTCCTTTGTGGTTTCTTCTTCAAACTCCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR CCA 90 bp TTGCTTTCTCTGTTATCACTAAGCAAAAGCACCTTTGAGAAGGTATaGTGGTGTAAATATGTTTGGCCCAGGGAGTGGCACTATTTGAAA +
Preference number: 1 (lower is better)
Translates to: LLSLLSLSKSTFEKV*WCKYVWPREWHYLK
Trigger: TTTCAAATAGTGCCACTCCCTGGGCCAAACATATTTACACCACCATACCTTCTCAAAGGTGCTTTTGCTTAGTGATAACAGAGAAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR TCA 90 bp CAAGCTTTAGACAAAGAAGCAACAAATGATATCACTGACATTATGTaGGGTAGGTATGTGCTGTTTTCAAAATTCCTACACCAGGAACTA +
Preference number: 1 (lower is better)
Translates to: QALDKEATNDITDIM*GRYVLFSKFLHQEL
Trigger: TAGTTCCTGGTGTAGGAATTTTGAAAACAGCACATACCTACCTCACATAATGTCAGTGATATCATTTGTTGCTTCTTTGTCTAAAGCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR-3UTR GCA 90 bp ATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCTCCAGTGCCTTGACTaGCTGGATGCTGCCATGCTT +
Preference number: 2 (lower is better)
Translates to: ISSHLPTSGQGTLRTQCSLQCLD*LDAAML
Trigger: AAGCATGGCAGCATCCAGGCAGTCAAGGCACTGGAG...AGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR-3UTR GCA 90 bp CATCACCAACTATGTTATAATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACCAGAGTCAGAGGCACTaGAGCCCCAACTCCAAGGTC +
Preference number: 2 (lower is better)
Translates to: HHQLCYNILPSPHLWAGYQSQRH*SPNSKV
Trigger: GACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTG...GTACCCTGCCCAGAGGTGGGGAGATGGGAGGATATTATAACATAGTTGGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR-3UTR TCA 90 bp ATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTTCTCCTCCAAGCTTCTaGTTGGTGTCAAGAATCAGG +
Preference number: 2 (lower is better)
Translates to: ISSHLPTSGQGTLRTQCSSPPSF*LVSRIR
Trigger: CCTGATTCTTGACACCAATCAGAAGCTTGGAGGAGA...AGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR-3UTR GCA 90 bp CCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCAGTTTAAACCACAAAGGAAAGTaGTTATTGGCTGGCTTCTTG +
Preference number: 2 (lower is better)
Translates to: PISPPLGRVLCVHNALSLNHKGK*LLAGFL
Trigger: CAAGAAGCCAGCCAATAAGCACTTTCCTTTGTGGTT...TAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR-3UTR CCA 90 bp CATCACCAACTATGTTATAATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACCCAGAGGGTCTGTCCTaGTATTTACCTAACACTCAG +
Preference number: 2 (lower is better)
Translates to: HHQLCYNILPSPHLWAGYPEGLS*YLPNTQ
Trigger: CTGAGTGTTAGGTAAATACCAGGACAGACCCTCTGG...GTACCCTGCCCAGAGGTGGGGAGATGGGAGGATATTATAACATAGTTGGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR-3UTR TCA 90 bp CCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCAGTTTATTGATGATAATGGACTaGACCTCAATCTACAAGCCA +
Preference number: 2 (lower is better)
Translates to: PISPPLGRVLCVHNALSLLMIMD*TSIYKP
Trigger: TGGCTTGTAGATTGAGGTTCAGTCCATTATCATCAA...TAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR-3UTR CCA 90 bp ATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTTTAAAAGAGTTGCCTTaGTCACAACAATGGAAACCC +
Preference number: 2 (lower is better)
Translates to: ISSHLPTSGQGTLRTQCSLKELP*SQQWKP
Trigger: GGGTTTCCATTGTTGTGACCAAGGCAACTCTTTTAA...AGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR-3UTR GCA 90 bp CCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCAGTTTACCAGGTATTTTATCCTaGTGCCATTTTATACTTGGT +
Preference number: 2 (lower is better)
Translates to: PISPPLGRVLCVHNALSLPGILS*CHFILG
Trigger: ACCAAGTATAAAATGGCAGCAGGATAAAATACCTGG...TAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR CAA 90 bp TATGTTATAATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTaGCGTACACAATGCTCTCAGTTTAAGGACTGTAACCTTTACATC +
Preference number: 2 (lower is better)
Translates to: YVIISSHLPTSGQGT*RTQCSQFKDCNLYI
Trigger: GATGTAAAGGTTACAGTCCTTAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATATTATAACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR-3UTR GCA 90 bp CATCACCAACTATGTTATAATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACAATAATTCCTCAATTTaGTTCCTCTTAAGGGTGCCT +
Preference number: 2 (lower is better)
Translates to: HHQLCYNILPSPHLWAGYNNSSI*FLLRVP
Trigger: AGGCACCCTTAAGAGGAAGCAAATTGAGGAATTATT...GTACCCTGCCCAGAGGTGGGGAGATGGGAGGATATTATAACATAGTTGGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR-3UTR CCA 90 bp GTATGGTGGTGTAAATATGTTTGGCCCAGGGAGTGGCACTATTTGAAAGTATGGATTAAGCTGCAGTGTTaGAATGAGAAGTGCGTCCCA +
Preference number: 2 (lower is better)
Translates to: VWWCKYVWPREWHYLKVWIKLQC*NEKCVP
Trigger: TGGGACGCACTTCTCATTCCAACACTGCAGCTTAAT...CCATACTTTCAAATAGTGCCACTCCCTGGGCCAAACATATTTACACCACCATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR-3UTR CCA 90 bp GTATGGTGGTGTAAATATGTTTGGCCCAGGGAGTGGCACTATTTGAAAGTATGGAAAGTGCTTATTGGCTaGCTTCTTGTAGCTGGCTTT +
Preference number: 2 (lower is better)
Translates to: VWWCKYVWPREWHYLKVWKVLIG*LLVAGF
Trigger: AAAGCCAGCTACAAGAAGCCAGCCAATAAGCACTTT...CCATACTTTCAAATAGTGCCACTCCCTGGGCCAAACATATTTACACCACCATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR-3UTR CCA 90 bp GGCCTTTCTACATCAATTAATAATCAAGAAAAAGGCCCACTGGTATGTCCACAACTCCAAGCTTCTGATTaGTGTCAAGAATCAGGCATT +
Preference number: 2 (lower is better)
Translates to: GLSTSINNQEKGPLVCPQLQASD*CQESGI
Trigger: AATGCCTGATTCTTGACACCAATCAGAAGCTTGGAG...TTGTGGACATACCAGTGGGCCTTTTTCTTGATTATTAATTGATGTAGAAAGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR-3UTR CCA 90 bp TTCAATACAAACTCTTCTTCTGGATTAGTTAAACAGCAGAGAGAACAAGCCTTCCTCCAAGCTTCTGATTaGTGTCAAGAATCAGGCATT +
Preference number: 2 (lower is better)
Translates to: FNTNSSSGLVKQQREQAFLQASD*CQESGI
Trigger: AATGCCTGATTCTTGACACCAATCAGAAGCTTGGAG...GAAGGCTTGTTCTCTCTGCTGTTTAACTAATCCAGAAGAAGAGTTTGTATTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
3UTR TCA 72 bp GATGAAGATGAAGAACTCTCAGCTCCTCCAGTGCCTTaGCTGCCTGGATGCTGCCATGCTTCCAGCTTTGAT +
Preference number: 3 (lower is better)
Translates to: DEDEELSAPPVP*LPGCCHASSFD
Trigger: ATCAAAGCTGGAAGCATGGCAGCATCCAGGCAGTCAAGGCACTGGAGGAGCTGAGAGTTCTTCATCTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR GCA 72 bp TATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTTaGGTACACAATGCTCTCAGTTTAAGGACTGTAACC +
Preference number: 3 (lower is better)
Translates to: YPPISPPLGRVL*VHNALSLRTVT
Trigger: GGTTACAGTCCTTAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR CCA 72 bp CCCAGGGAGTGGCACTATTTGAAAGTATGGCCTTGTTaGAGTAGGTGTGGCCTTGTTAGAGTAGGTGTGTCA +
Preference number: 3 (lower is better)
Translates to: PREWHYLKVWPC*SRCGLVRVGVS
Trigger: TGACACACCTACTCTAACAAGGCCACACCTACTCCAACAAGGCCATACTTTCAAATAGTGCCACTCCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR-3UTR CAA 90 bp ATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCTTAAAAGAGTTGCCTaGGTCACAACAATGGAAACC +
Preference number: 3 (lower is better)
Translates to: ISSHLPTSGQGTLRTQCSLKRVA*VTTMET
Trigger: GGTTTCCATTGTTGTGACCAAGGCAACTCTTTTAAG...AGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR TCA 72 bp GGTGTAAATATGTTTGGCCCAGGGAGTGGCACTATTTaGAAGTATGGCCTTGTTGGAGTAGGTGTGGCCTTG +
Preference number: 3 (lower is better)
Translates to: GVNMFGPGSGTI*KYGLVGVGVAL
Trigger: CAAGGCCACACCTACTCCAACAAGGCCATACTTTCAAATAGTGCCACTCCCTGGGCCAAACATATTTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR GCA 72 bp CTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATaGTCTCAGTTTAAGGACTGTAACCTTTACATCATT +
Preference number: 3 (lower is better)
Translates to: LPTSGQGTLRTQ*SQFKDCNLYII
Trigger: AATGATGTAAAGGTTACAGTCCTTAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR CCA 72 bp TATGTTTGGCCCAGGGAGTGGCACTATTTGAAAGTATaGCCTTGTTGGAGTAGGTGTGGCCTTGTTAGAGTA +
Preference number: 3 (lower is better)
Translates to: YVWPREWHYLKV*PCWSRCGLVRV
Trigger: TACTCTAACAAGGCCACACCTACTCCAACAAGGCCATACTTTCAAATAGTGCCACTCCCTGGGCCAAACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR CCA 72 bp CAACTATGTTATAATATCCTCCCATCTCCCCACCTCTaGGCAGGGTACTTTGCGTACACAATGCTCTCAGTT +
Preference number: 3 (lower is better)
Translates to: QLCYNILPSPHL*AGYFAYTMLSV
Trigger: AACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATATTATAACATAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR CCA 72 bp AAGGTATGGTGGTGTAAATATGTTTGGCCCAGGGAGTaGCACTATTTGAAAGTATGGCCTTGTTGGAGTAGG +
Preference number: 3 (lower is better)
Translates to: KVWWCKYVWPRE*HYLKVWPCWSR
Trigger: CCTACTCCAACAAGGCCATACTTTCAAATAGTGCCACTCCCTGGGCCAAACATATTTACACCACCATACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR TCA 72 bp GATGCTGCCATGCTTCCAGCTTTGATGATAATGGACTaGACCTCAATCTACAAGCCAGCCTCGATTAAATGT +
Preference number: 3 (lower is better)
Translates to: DAAMLPALMIMD*TSIYKPASIKC
Trigger: ACATTTAATCGAGGCTGGCTTGTAGATTGAGGTTCAGTCCATTATCATCAAAGCTGGAAGCATGGCAGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR CCA 72 bp CGTGTTTTAGTCAGTGGCTTAGTATCCAGTGGGGAGTaGCTTCACTTGTCTCTTGTTGACTTATTAGAACAG +
Preference number: 3 (lower is better)
Translates to: RVLVSGLVSSGE*LHLSLVDLLEQ
Trigger: CTGTTCTAATAAGTCAACAAGAGACAAGTGAAGCCACTCCCCACTGGATACTAAGCCACTGACTAAAACACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR-3UTR CAA 90 bp GTATCCAGTGGGGAGTGGCTTCACTTGTCTCTTGTTGACTTATTAGAACAGTCTTTGTCCTTAAAAGAGTaGCCTTGGTCACAACAATGG +
Preference number: 3 (lower is better)
Translates to: VSSGEWLHLSLVDLLEQSLSLKE*PWSQQW
Trigger: CCATTGTTGTGACCAAGGCAACTCTTTTAAGGACAA...AGACTGTTCTAATAAGTCAACAAGAGACAAGTGAAGCCACTCCCCACTGGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR CCA 72 bp TTATCACTAAGCAAAAGCACCTTTGAGAAGGTATGGTaGTGTAAATATGTTTGGCCCAGGGAGTGGCACTAT +
Preference number: 3 (lower is better)
Translates to: LSLSKSTFEKVW*CKYVWPREWHY
Trigger: ATAGTGCCACTCCCTGGGCCAAACATATTTACACCACCATACCTTCTCAAAGGTGCTTTTGCTTAGTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR CCA 72 bp AACCCCTGCCTAAGGATAGTACCACCCATAGTGAGCTaGGCCTTTCTACATCAATTAATAATCAAGAAAAAG +
Preference number: 3 (lower is better)
Translates to: NPCLRIVPPIVS*AFLHQLIIKKK
Trigger: CTTTTTCTTGATTATTAATTGATGTAGAAAGGCCCAGCTCACTATGGGTGGTACTATCCTTAGGCAGGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR CCA 72 bp TTGAAGAAGAAACCACAAAGGAAAGTGCTTATTGGCTaGCTTCTTGTAGCTGGCTTTACCTTTCTTTTGCAA +
Preference number: 3 (lower is better)
Translates to: LKKKPQRKVLIG*LLVAGFTFLLQ
Trigger: TTGCAAAAGAAAGGTAAAGCCAGCTACAAGAAGCCAGCCAATAAGCACTTTCCTTTGTGGTTTCTTCTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR GCA 72 bp CAAATGATATCACTGACATTATGTGAGGTAGGTATGTaGTGTTTTCAAAATTCCTACACCAGGAACTACAGT +
Preference number: 3 (lower is better)
Translates to: QMISLTLCEVGM*CFQNSYTRNYS
Trigger: ACTGTAGTTCCTGGTGTAGGAATTTTGAAAACAGCACATACCTACCTCACATAATGTCAGTGATATCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR TCA 72 bp ATGACTAGAAATGTTCAAGAGAGTAGTATAGTAAATTaGCTTTGTTTGACCCCACATTGGATAAACTGCCAT +
Preference number: 3 (lower is better)
Translates to: MTRNVQESSIVN*LCLTPHWINCH
Trigger: ATGGCAGTTTATCCAATGTGGGGTCAAACAAAGTCAATTTACTATACTACTCTCTTGAACATTTCTAGTCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTTGTCAGGGTGCCTGCTaGAGCTGGTGGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFCQGAC*SWWASA
Trigger: GGCAGAGGCCCACCAGCTCCAGCAGGCACCCTGACA...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTGACAGACTGTCAGGGTaGCTGCTGGAGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFDRLSG*LLELVG
Trigger: GCCCACCAGCTCCAGCAGGCACCCTGACAGTCTGTC...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp CATCACCAACTATGTTATAATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTGTCAGGGTGCCTGCTaGAGCTGGTGGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: HHQLCYNILPSPHLWAGYCQGAC*SWWASA
Trigger: GGCAGAGGCCCACCAGCTCCAGCAGGCACCCTGACA...GTACCCTGCCCAGAGGTGGGGAGATGGGAGGATATTATAACATAGTTGGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp ATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTTTCCCTGCCAGTGGCTaGGGGAGAACTGGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: ISSHLPTSGQGTLRTQCSFPASG*GRTGAE
Trigger: TTCAGCTCCAGTTCTCCCTCAGCCACTGGCAGGGAA...AGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR GCA 90 bp CCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCAGTTTAGTGACTGGAGTTCCCTaGCAGTGGCTGAGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: PISPPLGRVLCVHNALSLVTGVP*QWLREN
Trigger: GTTCTCCCTCAGCCACTGGCAGGGAACTCCAGTCAC...TAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp CATCACCAACTATGTTATAATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACGCCTGCTGGAGCTGGTaGGCCTCTGCCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: HHQLCYNILPSPHLWAGYACWSW*ASAFLS
Trigger: GGAGAGAAAGGCAGAGGCCCACCAGCTCCAGCAGGC...GTACCCTGCCCAGAGGTGGGGAGATGGGAGGATATTATAACATAGTTGGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTACAGGCAGGTCAGGCTaGAGCACTGCTGGGGTAACA +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFTGRSG*STAGVT
Trigger: TGTTACCCCAGCAGTGCTTCAGCCTGACCTGCCTGT...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR GCA 90 bp CCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCAGTTTAGTGGCATCCAAAAGCTaGCTCTTCCTGGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PISPPLGRVLCVHNALSLVASKS*LFLVGR
Trigger: CCTGCCTACCAGGAAGAGGCAGCTTTTGGATGCCAC...TAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp ATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTTCCTCCCAGTCTCCGTaGCATCCAAAAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: ISSHLPTSGQGTLRTQCSSSQSP*HPKAAS
Trigger: AGAGGCAGCTTTTGGATGCCACGGAGACTGGGAGGA...AGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAAGCCTGCTGGAGCTGGTaGGCCTCTGCCTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQEACWSW*ASAFLS
Trigger: GGAGAGAAAGGCAGAGGCCCACCAGCTCCAGCAGGC...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAAGGTGCCTGCTGGAGCTaGTGGGCCTCTGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQEGACWS*WASAFL
Trigger: GAGAAAGGCAGAGGCCCACCAGCTCCAGCAGGCACC...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp CCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCAGTTTACTGCATATCTGGCCTTaGCACTGGAACCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: PISPPLGRVLCVHNALSLLHIWP*HWNLTV
Trigger: GACAGTGAGGTTCCAGTGTCAAGGCCAGATATGCAG...TAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTGGTGGAGTGGGTGGTTaGAGGCAATTCAGTGGACTG +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFGGVGG*RQFSGL
Trigger: CAGTCCACTGAATTGCCTTCAACCACCCACTCCACC...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTGAGCTGGTGGGCCTCTaGCTTTCTCTCCTGACATTC +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFELVGL*LSLLTF
Trigger: GAATGTCAGGAGAGAAAGGCAGAGGCCCACCAGCTC...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTTCCTCCCAGTCTCCGTaGCATCCAAAAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFSSQSP*HPKAAS
Trigger: AGAGGCAGCTTTTGGATGCCACGGAGACTGGGAGGA...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp ATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCAAATGGTGAAATGGTaGTGGTGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ISSHLPTSGQGTLRTQCSQMVKW*WWWWWW
Trigger: CCACCACCACCACCACCACCACCATTTCACCATTTG...AGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTGCTGGGTGGAGTGGGTaGTTGAAGGCAATTCAGTGG +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFAGWSG*LKAIQW
Trigger: CCACTGAATTGCCTTCAACCACCCACTCCACCCAGC...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGGTGCCTGCTGGAGCTaGTGGGCCTCTGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGGACWS*WASAFL
Trigger: GAGAAAGGCAGAGGCCCACCAGCTCCAGCAGGCACC...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTTCAGGCCCACAGGACTaGTCCTTGCAGGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGSGPQD*SLQELL
Trigger: GAGCAGCTCCTGCAAGGATCAGTCCTGTGGGCCTGA...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTTGGAGTGAAGGCTTATaGGGTCCCAGGTGGTATTGC +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFWSEGL*GPRWYC
Trigger: GCAATACCACCTGGGACCTCATAAGCCTTCACTCCA...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp ATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTAGCATTCTCAACAGATaGCAGACTGTCAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ISSHLPTSGQGTLRTQCSSILNR*QTVRVP
Trigger: AGGCACCCTGACAGTCTGTCATCTGTTGAGAATGCT...AGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR GCA 90 bp CCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCAGTTTAAACCACCAATGCTCCTaGAGTCTGGGTGTGACTCAA +
Preference number: 4 (lower is better)
Translates to: PISPPLGRVLCVHNALSLNHQCS*SLGVTQ
Trigger: TTGAGTCACACCCAGACTGCAGGAGCATTGGTGGTT...TAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR GCA 90 bp ATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTACCCAGGGTAGCATTTaGACTTTGCTTCTCCACTCC +
Preference number: 4 (lower is better)
Translates to: ISSHLPTSGQGTLRTQCSTQGSI*TLLLHS
Trigger: GGAGTGGAGAAGCAAAGTGCAAATGCTACCCTGGGT...AGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp CCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCAGTTTAAATCTGTTCAGCAGCTaGTTGTGTGGGCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PISPPLGRVLCVHNALSLNLFSS*LCGLLC
Trigger: ACAGAGGAGCCCACACAACCAGCTGCTGAACAGATT...TAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGGAGTTCCCTGCCAGTaGCTGAGGGAGAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGGVPCQ*LRENWS
Trigger: GCTCCAGTTCTCCCTCAGCCACTGGCAGGGAACTCC...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp GTATGGTGGTGTAAATATGTTTGGCCCAGGGAGTGGCACTATTTGAAAGTATGGTCAGGCCCACAGGACTaGTCCTTGCAGGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VWWCKYVWPREWHYLKVWSGPQD*SLQELL
Trigger: GAGCAGCTCCTGCAAGGATCAGTCCTGTGGGCCTGA...CCATACTTTCAAATAGTGCCACTCCCTGGGCCAAACATATTTACACCACCATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp CCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCAGTTTACCAGAAGTTGGATGCTaGATTCCGCAATCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: PISPPLGRVLCVHNALSLPEVGC*IPQSVQ
Trigger: CTGAACAGATTGCGGAATTCAGCATCCAACTTCTGG...TAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp ATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTAGGGAGAACTGGAGCTaGAACCAAATGGTGAAATGG +
Preference number: 4 (lower is better)
Translates to: ISSHLPTSGQGTLRTQCSRENWS*NQMVKW
Trigger: CCATTTCACCATTTGGTTTCAGCTCCAGTTCTCCCT...AGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTCACTTCCAACTGGTCTaGGATGTTGGAAGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFHFQLV*DVGSQG
Trigger: TCCTTGGCTTCCAACATCTCAGACCAGTTGGAAGTG...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAAGTTGGCCTCATCACCTaGTTCCACGTCCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQEVGLIT*FHVQGV
Trigger: TACTCCCTGGACGTGGAATCAGGTGATGAGGCCAAC...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp ATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTTCTGCCTTTCTCTCCTaGCATTCTGAGCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: ISSHLPTSGQGTLRTQCSSAFLS*HSELEA
Trigger: TGCTTCAAGCTCAGAATGTCAGGAGAGAAAGGCAGA...AGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTAGCATTCTCAACAGATaGCAGACTGTCAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFSILNR*QTVRVP
Trigger: AGGCACCCTGACAGTCTGTCATCTGTTGAGAATGCT...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp CATCACCAACTATGTTATAATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACGTTTGCCACAGCCTCTaGAACGGTTTCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: HHQLCYNILPSPHLWAGYVCHSL*NGFTGA
Trigger: TGCTCCAGTGAAACCGTTGCAGAGGCTGTGGCAAAC...GTACCCTGCCCAGAGGTGGGGAGATGGGAGGATATTATAACATAGTTGGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp ATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCCCATCAAAAAGTTCTaGTGCAGCGTCTCAGCGATA +
Preference number: 4 (lower is better)
Translates to: ISSHLPTSGQGTLRTQCSPIKKF*CSVSAI
Trigger: TATCGCTGAGACGCTGCACCAGAACTTTTTGATGGG...AGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTTCTAGCTGGGTGGAGTaGGTGGTTGAAGGCAATTCA +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFSSWVE*VVEGNS
Trigger: TGAATTGCCTTCAACCACCCACTCCACCCAGCTAGA...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTTCTCAATTTCATTGCTaGTACTCTCCTGCGGTGACG +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFSQFHC*YSPAVT
Trigger: CGTCACCGCAGGAGAGTATCAGCAATGAAATTGAGA...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp ATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTTGTCACCTGAAGACTTaGACTTTGGGTGTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: ISSHLPTSGQGTLRTQCSCHLKT*TLGVPN
Trigger: GTTTGGAACACCCAAAGTTCAAGTCTTCAGGTGACA...AGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAAGCTGGGGTAACAGAATaGAGAGTCAAGCTGCTACCC +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQEAGVTE*RVKLLP
Trigger: GGGTAGCAGCTTGACTCTTCATTCTGTTACCCCAGC...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGGTGGAGTGGGTGGTTaGAGGCAATTCAGTGGACTG +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGGGVGG*RQFSGL
Trigger: CAGTCCACTGAATTGCCTTCAACCACCCACTCCACC...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp ATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCAATGCTGCCGTTTCTaGAACTCAGGATTTCTAGGT +
Preference number: 4 (lower is better)
Translates to: ISSHLPTSGQGTLRTQCSQCCRF*NSGFLG
Trigger: ACCTAGAAATCCTGAGTTTCAGAAACGGCAGCATTG...AGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTTGGCCTCATCACCTaGTTCCACGTCCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGVGLIT*FHVQGV
Trigger: TACTCCCTGGACGTGGAATCAGGTGATGAGGCCAAC...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTTCTGCCTTTCTCTCCTaGCATTCTGAGCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFSAFLS*HSELEA
Trigger: TGCTTCAAGCTCAGAATGTCAGGAGAGAAAGGCAGA...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTGCTCTCTGGTGTACTTaGCAATGTGTCTCTGGACAA +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFALWCT*QCVSGQ
Trigger: TTGTCCAGAGACACATTGGCAAGTACACCAGAGAGC...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTCCCATCAAAAAGTTCTaGTGCAGCGTCTCAGCGATA +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFPIKKF*CSVSAI
Trigger: TATCGCTGAGACGCTGCACCAGAACTTTTTGATGGG...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTCTCACATTGATGAGCTaGAGAGACTTGGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFLTLMS*RDLGSG
Trigger: TCCAGATCCCAAGTCTCTCCAGCTCATCAATGTGAG...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTAGGCTGAAGCACTGCTaGGGTAACAGAATGAAGAGT +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFRLKHC*GNRMKS
Trigger: ACTCTTCATTCTGTTACCCCAGCAGTGCTTCAGCCT...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp CATCACCAACTATGTTATAATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACGGGATCACTTCCAACTaGTCTGAGATGTTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: HHQLCYNILPSPHLWAGYGITSN*SEMLEA
Trigger: GGCTTCCAACATCTCAGACCAGTTGGAAGTGATCCC...GTACCCTGCCCAGAGGTGGGGAGATGGGAGGATATTATAACATAGTTGGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR CAA 72 bp ATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTaGCGTACACAATGCTCTCAGTTTAAGGACTGTAAC +
Preference number: 4 (lower is better)
Translates to: ISSHLPTSGQGT*RTQCSQFKDCN
Trigger: GTTACAGTCCTTAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGATCCCAAAACGTCCTaGAGGCTTCCCAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGDPKTS*RLPRWL
Trigger: AAGCCATCTGGGAAGCCTTCAGGACGTTTTGGGATC...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGATCCTTGCAGGAGCTaGTCTCAGCTTCCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGDPCRS*SQLPLC
Trigger: ACACAAGGGAAGCTGAGAGCAGCTCCTGCAAGGATC...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTCACAGGACTGATCCTTaGAGGAGCTGCTCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGHRTDP*RSCSQL
Trigger: AAGCTGAGAGCAGCTCCTGCAAGGATCAGTCCTGTG...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAAACCCAGGGTAGCATTTaGACTTTGCTTCTCCACTCC +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQETQGSI*TLLLHS
Trigger: GGAGTGGAGAAGCAAAGTGCAAATGCTACCCTGGGT...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp CCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCAGTTTACAAGTGGCTCTCATATaGAGGGTTATACTTCATAGC +
Preference number: 4 (lower is better)
Translates to: PISPPLGRVLCVHNALSLQVALI*RVILHS
Trigger: GCTATGAAGTATAACCCTGCATATGAGAGCCACTTG...TAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR GCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAAGTCAGGCTGAAGCACTaGATTGATGAGCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQEVRLKH*IDELER
Trigger: TCTCTCCAGCTCATCAATGCAGTGCTTCAGCCTGAC...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAAAATCTGTTCAGCAGCTaGTTGTGTGGGCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQENLFSS*LCGLLC
Trigger: ACAGAGGAGCCCACACAACCAGCTGCTGAACAGATT...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAAAAAGCACTTTGTGACTaGAGTTCCCTGCCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQEKALCD*SSLPVA
Trigger: AGCCACTGGCAGGGAACTCCAGTCACAAAGTGCTTT...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAAAGAAGAGGTCAGATGTaGTGTGGACAAGAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQERRGQM*CGQESR
Trigger: ACGGCTCTCTTGTCCACACCACATCTGACCTCTTCT...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAAACTGGTCTGAGATGTTaGAAGCCAAGGACTCCAAGC +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQETGLRC*KPRTPS
Trigger: GCTTGGAGTCCTTGGCTTCCAACATCTCAGACCAGT...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAAGGGATCACTTCCAACTaGTCTGAGATGTTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQEGITSN*SEMLEA
Trigger: GGCTTCCAACATCTCAGACCAGTTGGAAGTGATCCC...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAATCTAGCTGGGTGGAGTaGGTGGTTGAAGGCAATTCA +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQESSWVE*VVEGNS
Trigger: TGAATTGCCTTCAACCACCCACTCCACCCAGCTAGA...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp CCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCAGTTTATGGTTTGGTAGGCAGTaGTACAAAAGTCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PISPPLGRVLCVHNALSLWFGRQ*YKSLPE
Trigger: TTCTGGAAGACTTTTGTACCACTGCCTACCAAACCA...TAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAACCAGAAGTTGGATGCTaGATTCCGCAATCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQEPEVGC*IPQSVQ
Trigger: CTGAACAGATTGCGGAATTCAGCATCCAACTTCTGG...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp ATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTTGCTTTTTCAACCTCTaGAATAAACTCTTCCACGAG +
Preference number: 4 (lower is better)
Translates to: ISSHLPTSGQGTLRTQCSCFFNL*NKLFHE
Trigger: CTCGTGGAAGAGTTTATTTCAGAGGTTGAAAAAGCA...AGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp ATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTGAGAGCCATTCAGCTTaGAGGGTATTATCCAAAATA +
Preference number: 4 (lower is better)
Translates to: ISSHLPTSGQGTLRTQCSESHSA*RVLSKI
Trigger: TATTTTGGATAATACCCTTCAAGCTGAATGGCTCTC...AGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp GTATCCAGTGGGGAGTGGCTTCACTTGTCTCTTGTTGACTTATTAGAACAGTCTTTGTCACGCGGAGGCTaGAGAAAACCACCAATGCTC +
Preference number: 4 (lower is better)
Translates to: VSSGEWLHLSLVDLLEQSLSRGG*RKPPML
Trigger: GAGCATTGGTGGTTTTCTTCAGCCTCCGCGTGACAA...AGACTGTTCTAATAAGTCAACAAGAGACAAGTGAAGCCACTCCCCACTGGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp CATCACCAACTATGTTATAATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACAGATCACAGAGACTTTaGCAAGGCAGTTCATCCACA +
Preference number: 4 (lower is better)
Translates to: HHQLCYNILPSPHLWAGYRSQRL*QGSSST
Trigger: TGTGGATGAACTGCCTTGTCAAAGTCTCTGTGATCT...GTACCCTGCCCAGAGGTGGGGAGATGGGAGGATATTATAACATAGTTGGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR GCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAAATACTTCACATGGTTTaGCACAGCCTCTGCAACGGT +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQEILHMV*HSLCNG
Trigger: ACCGTTGCAGAGGCTGTGGCAAACCATGTGAAGTAT...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTATGGTCCACACAGGCTaGATATCTGGCCTTGACACT +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGMVHTG*ISGLDT
Trigger: AGTGTCAAGGCCAGATATGCAGCCTGTGTGGACCAT...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGAAGAAAACCACCAATaGTCCTGCAGTCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGEENHQ*SCSLGV
Trigger: CACACCCAGACTGCAGGAGCATTGGTGGTTTTCTTC...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCGACAGACTGTCAGGGTaGCTGCTGGAGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLDRLSG*LLELVG
Trigger: GCCCACCAGCTCCAGCAGGCACCCTGACAGTCTGTC...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAACAGTGGACTGTGTCATaGAAGCTTTCAACCAGAGTC +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQEQWTVS*KLSTRV
Trigger: GACTCTGGTTGAAAGCTTCCATGACACAGTCCACTG...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTTCTCAATTTCATTGCTaGTACTCTCCTGCGGTGACG +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGSQFHC*YSPAVT
Trigger: CGTCACCGCAGGAGAGTATCAGCAATGAAATTGAGA...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp GTATCCAGTGGGGAGTGGCTTCACTTGTCTCTTGTTGACTTATTAGAACAGTCTCACTTCCAACTGGTCTaGGATGTTGGAAGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: VSSGEWLHLSLVDLLEQSHFQLV*DVGSQG
Trigger: TCCTTGGCTTCCAACATCTCAGACCAGTTGGAAGTG...AGACTGTTCTAATAAGTCAACAAGAGACAAGTGAAGCCACTCCCCACTGGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAATGTCCAAACTGTATCTaGTTCTGGCAACATGGTCCA +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQECPNCI*FWQHGP
Trigger: TGGACCATGTTGCCAGAATCAGATACAGTTTGGACA...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTAATTCATTACAGGCCTaGAACTTGCAAGGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGNSLQA*NLQGLA
Trigger: GGCCAACCCTTGCAAGTTTCAGGCCTGTAATGAATT...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTATCCTCATTCTCTCTTaGATTTCCTCTTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFILILS*ISSLER
Trigger: CCTTTCCAAAGAGGAAATTCAAGAGAGAATGAGGAT...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTCTTCTAATTCTTCAGTaGTGGCTAACCCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: KSESEALQPQLQGLALSFLLILQ*WLTHLL
Trigger: TAGAAGATGGGTTAGCCAGCACTGAAGAATTAGAAG...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp GTATGGTGGTGTAAATATGTTTGGCCCAGGGAGTGGCACTATTTGAAAGTATGGATGGTCCACACAGGCTaGATATCTGGCCTTGACACT +
Preference number: 4 (lower is better)
Translates to: VWWCKYVWPREWHYLKVWMVHTG*ISGLDT
Trigger: AGTGTCAAGGCCAGATATGCAGCCTGTGTGGACCAT...CCATACTTTCAAATAGTGCCACTCCCTGGGCCAAACATATTTACACCACCATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR GCA 90 bp GTATCCAGTGGGGAGTGGCTTCACTTGTCTCTTGTTGACTTATTAGAACAGTCTGAAGAAAACCACCAATaGTCCTGCAGTCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: VSSGEWLHLSLVDLLEQSEENHQ*SCSLGV
Trigger: CACACCCAGACTGCAGGAGCATTGGTGGTTTTCTTC...AGACTGTTCTAATAAGTCAACAAGAGACAAGTGAAGCCACTCCCCACTGGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR GCA 90 bp CATCACCAACTATGTTATAATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACGTAGCATTTGCACTTTaGTTCTCCACTCCATGGATT +
Preference number: 4 (lower is better)
Translates to: HHQLCYNILPSPHLWAGYVAFAL*FSTPWI
Trigger: AATCCATGGAGTGGAGAAGCAAAGTGCAAATGCTAC...GTACCCTGCCCAGAGGTGGGGAGATGGGAGGATATTATAACATAGTTGGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp CCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCAGTTTATTGTATAGACAGCAGTaGGTTTATCATCCATCTCTA +
Preference number: 4 (lower is better)
Translates to: PISPPLGRVLCVHNALSLLYRQQ*VYHPSL
Trigger: TAGAGATGGATGATAAACCCACTGCTGTCTATACAA...TAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp GTATCCAGTGGGGAGTGGCTTCACTTGTCTCTTGTTGACTTATTAGAACAGTCTACTGGTCTGAGATGTTaGAAGCCAAGGACTCCAAGC +
Preference number: 4 (lower is better)
Translates to: VSSGEWLHLSLVDLLEQSTGLRC*KPRTPS
Trigger: GCTTGGAGTCCTTGGCTTCCAACATCTCAGACCAGT...AGACTGTTCTAATAAGTCAACAAGAGACAAGTGAAGCCACTCCCCACTGGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTAACTCCTCACAGTGTTaGCCTCGATACCACCAGTTT +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGNSSQC*PRYHQF
Trigger: AAACTGGTGGTATCGAGGCCAACACTGTGAGGAGTT...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp CCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCAGTTTACTTGAATTTCCTCTTTaGAAAGGTCGCTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: PISPPLGRVLCVHNALSLLEFPL*KGRYFH
Trigger: ATGAAAGTAGCGACCTTTCCAAAGAGGAAATTCAAG...TAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
3UTR CAA 72 bp TGGTGTAAATATGTTTGGCCCAGGGAGTGGCACTATTaGAAAGTATGGCCTTGTTGGAGTAGGTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: WCKYVWPREWHY*KVWPCWSRCGL
Trigger: AAGGCCACACCTACTCCAACAAGGCCATACTTTCAAATAGTGCCACTCCCTGGGCCAAACATATTTACACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp GTATCCAGTGGGGAGTGGCTTCACTTGTCTCTTGTTGACTTATTAGAACAGTCTAGCCAGGTAACCCTGTaGATGCTTTTTCAACCTCTG +
Preference number: 4 (lower is better)
Translates to: VSSGEWLHLSLVDLLEQSSQVTL*MLFQPL
Trigger: CAGAGGTTGAAAAAGCATTCACAGGGTTACCTGGCT...AGACTGTTCTAATAAGTCAACAAGAGACAAGTGAAGCCACTCCCCACTGGATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTTGTCCAAACTGTATCTaGTTCTGGCAACATGGTCCA +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGCPNCI*FWQHGP
Trigger: TGGACCATGTTGCCAGAATCAGATACAGTTTGGACA...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp GTATGGTGGTGTAAATATGTTTGGCCCAGGGAGTGGCACTATTTGAAAGTATGGAATTCATTACAGGCCTaGAACTTGCAAGGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: VWWCKYVWPREWHYLKVWNSLQA*NLQGLA
Trigger: GGCCAACCCTTGCAAGTTTCAGGCCTGTAATGAATT...CCATACTTTCAAATAGTGCCACTCCCTGGGCCAAACATATTTACACCACCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR GCA 90 bp GTATGGTGGTGTAAATATGTTTGGCCCAGGGAGTGGCACTATTTGAAAGTATGGGCTCTCTGGTGTACTTaGCAATGTGTCTCTGGACAA +
Preference number: 4 (lower is better)
Translates to: VWWCKYVWPREWHYLKVWALWCT*QCVSGQ
Trigger: TTGTCCAGAGACACATTGGCAAGTACACCAGAGAGC...CCATACTTTCAAATAGTGCCACTCCCTGGGCCAAACATATTTACACCACCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR GCA 90 bp GTATCCAGTGGGGAGTGGCTTCACTTGTCTCTTGTTGACTTATTAGAACAGTCTCTACAAATGGCTCCATaGCCAGGCATAATGTCACAC +
Preference number: 4 (lower is better)
Translates to: VSSGEWLHLSLVDLLEQSLQMAP*PGIMSH
Trigger: GTGTGACATTATGCCTGGGCATGGAGCCATTTGTAG...AGACTGTTCTAATAAGTCAACAAGAGACAAGTGAAGCCACTCCCCACTGGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp GACAGGAGTTTGAAGAAGAAACCACAAAGGAAAGTGCTTATTGGCTGGCTTCTTAACCAAATGGTGAAATaGTGGTGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: DRSLKKKPQRKVLIGWLLNQMVK*WWWWWW
Trigger: CCACCACCACCACCACCACCATTTCACCATTTGGTT...AAGAAGCCAGCCAATAAGCACTTTCCTTTGTGGTTTCTTCTTCAAACTCCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTCGATATCCAAGTTCATaGTTTGGTAGGCAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGRYPSS*FGRQWY
Trigger: GTACCACTGCCTACCAAACCATGAACTTGGATATCG...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAATGCTTCTCCACTCCATaGATTTACCAAACACTCAGA +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQECFSTP*IYQTLR
Trigger: TCTGAGTGTTTGGTAAATCCATGGAGTGGAGAAGCA...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp GGCCTTTCTACATCAATTAATAATCAAGAAAAAGGCCCACTGGTATGTCCACAAGATCCCAAAACGTCCTaGAGGCTTCCCAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: GLSTSINNQEKGPLVCPQDPKTS*RLPRWL
Trigger: AAGCCATCTGGGAAGCCTTCAGGACGTTTTGGGATC...TTGTGGACATACCAGTGGGCCTTTTTCTTGATTATTAATTGATGTAGAAAGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTCATAAATTCATCCAGTaGCGATATTCATCACGCCCA +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGHKFIQ*RYSSRP
Trigger: TGGGCGTGATGAATATCGTCACTGGATGAATTTATG...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp GACAGGAGTTTGAAGAAGAAACCACAAAGGAAAGTGCTTATTGGCTGGCTTCTTCTATGTTCCACAGACTaGCTAAAATGGGCGCCCATT +
Preference number: 4 (lower is better)
Translates to: DRSLKKKPQRKVLIGWLLLCSTD*LKWAPI
Trigger: AATGGGCGCCCATTTTAGTCAGTCTGTGGAACATAG...AAGAAGCCAGCCAATAAGCACTTTCCTTTGTGGTTTCTTCTTCAAACTCCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAAAGCCACTTTCAAAAATaGAGTCTTTTTCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQESHFQK*SLFPQR
Trigger: CCTCTGTGGAAAAAGACTTCATTTTTGAAAGTGGCT...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAATTTCATACATCTGTCTaGTTTCTTCTCTGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQEFHTSV*FLLCSD
Trigger: GTCTGAGCAGAGAAGAAATCAGACAGATGTATGAAA...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCGTGGCATCCAAAAGCTaGCTCTTCCTGGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLVASKS*LFLVGR
Trigger: CCTGCCTACCAGGAAGAGGCAGCTTTTGGATGCCAC...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp GGCCTTTCTACATCAATTAATAATCAAGAAAAAGGCCCACTGGTATGTCCACAAGATCCTTGCAGGAGCTaGTCTCAGCTTCCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: GLSTSINNQEKGPLVCPQDPCRS*SQLPLC
Trigger: ACACAAGGGAAGCTGAGAGCAGCTCCTGCAAGGATC...TTGTGGACATACCAGTGGGCCTTTTTCTTGATTATTAATTGATGTAGAAAGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR GCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAACTTCTAATTCTTCAGTaGTGGCTAACCCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQELLILQ*WLTHLL
Trigger: TAGAAGATGGGTTAGCCAGCACTGAAGAATTAGAAG...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp TTCAATACAAACTCTTCTTCTGGATTAGTTAAACAGCAGAGAGAACAAGCCTTCGAGCTGGTGGGCCTCTaGCTTTCTCTCCTGACATTC +
Preference number: 4 (lower is better)
Translates to: FNTNSSSGLVKQQREQAFELVGL*LSLLTF
Trigger: GAATGTCAGGAGAGAAAGGCAGAGGCCCACCAGCTC...GAAGGCTTGTTCTCTCTGCTGTTTAACTAATCCAGAAGAAGAGTTTGTATTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTATCTCTACAAGGCCATaGTTTTCTACCTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGISTRP*FSTLLE
Trigger: CTCCAACAAGGTAGAAAACCATGGCCTTGTAGAGAT...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GTATCCAGTGGGGAGTGGCTTCACTTGTCTCTTGTTGACTTATTAGAACAGTCTACTATGTCTTCTGTTTaGGGGAGCAAAACTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VSSGEWLHLSLVDLLEQSTMSSV*GSKTPL
Trigger: GAGAGGAGTTTTGCTCCCCCAAACAGAAGACATAGT...AGACTGTTCTAATAAGTCAACAAGAGACAAGTGAAGCCACTCCCCACTGGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp GACAGGAGTTTGAAGAAGAAACCACAAAGGAAAGTGCTTATTGGCTGGCTTCTTCTGATTCTGGCAACATaGTCCACACAGGCTGCATAT +
Preference number: 4 (lower is better)
Translates to: DRSLKKKPQRKVLIGWLLLILAT*STQAAY
Trigger: ATATGCAGCCTGTGTGGACCATGTTGCCAGAATCAG...AAGAAGCCAGCCAATAAGCACTTTCCTTTGTGGTTTCTTCTTCAAACTCCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTTGCTTCTCCACTCCATaGATTTACCAAACACTCAGA +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGCFSTP*IYQTLR
Trigger: TCTGAGTGTTTGGTAAATCCATGGAGTGGAGAAGCA...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
3UTR CAA 72 bp GTCAGTGGCTTAGTATCCAGTGGGGAGTGGCTTCACTaGTCTCTTGTTGACTTATTAGAACAGTCTACACAT +
Preference number: 4 (lower is better)
Translates to: VSGLVSSGEWLH*SLVDLLEQSTH
Trigger: ATGTGTAGACTGTTCTAATAAGTCAACAAGAGACAAGTGAAGCCACTCCCCACTGGATACTAAGCCACTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAAAAGCCAGTTTCTTCATaGTTAGGTTTCTATGTTCCA +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQEKPVSS*LGFYVP
Trigger: TGGAACATAGAAACCTAATCATGAAGAAACTGGCTT...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCTGGAGTGAAGGCTTATaGGGTCCCAGGTGGTATTGC +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLWSEGL*GPRWYC
Trigger: GCAATACCACCTGGGACCTCATAAGCCTTCACTCCA...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp GACAGGAGTTTGAAGAAGAAACCACAAAGGAAAGTGCTTATTGGCTGGCTTCTTTCTTTTGGCACAGGTTaGATTAATGGGCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: DRSLKKKPQRKVLIGWLLSFGTG*INGLEG
Trigger: GCCTTCAAGCCCATTAATTCAACCTGTGCCAAAAGA...AAGAAGCCAGCCAATAAGCACTTTCCTTTGTGGTTTCTTCTTCAAACTCCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTAGCCACTTTCAAAAATaGAGTCTTTTTCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGSHFQK*SLFPQR
Trigger: CCTCTGTGGAAAAAGACTTCATTTTTGAAAGTGGCT...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp TTCAATACAAACTCTTCTTCTGGATTAGTTAAACAGCAGAGAGAACAAGCCTTCCTGCATATCTGGCCTTaGCACTGGAACCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: FNTNSSSGLVKQQREQAFLHIWP*HWNLTV
Trigger: GACAGTGAGGTTCCAGTGTCAAGGCCAGATATGCAG...GAAGGCTTGTTCTCTCTGCTGTTTAACTAATCCAGAAGAAGAGTTTGTATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCTTGTCACGCGGAGGCTaGAGAAAACCACCAATGCTC +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLLSRGG*RKPPML
Trigger: GAGCATTGGTGGTTTTCTTCAGCCTCCGCGTGACAA...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp TTCAATACAAACTCTTCTTCTGGATTAGTTAAACAGCAGAGAGAACAAGCCTTCGTTTGCCACAGCCTCTaGAACGGTTTCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: FNTNSSSGLVKQQREQAFVCHSL*NGFTGA
Trigger: TGCTCCAGTGAAACCGTTGCAGAGGCTGTGGCAAAC...GAAGGCTTGTTCTCTCTGCTGTTTAACTAATCCAGAAGAAGAGTTTGTATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp TTCAATACAAACTCTTCTTCTGGATTAGTTAAACAGCAGAGAGAACAAGCCTTCCTGGATAGGAAGCACTaGAGACAGCACCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: FNTNSSSGLVKQQREQAFLDRKH*RQHLSV
Trigger: CACTGACAGGTGCTGTCTCCAGTGCTTCCTATCCAG...GAAGGCTTGTTCTCTCTGCTGTTTAACTAATCCAGAAGAAGAGTTTGTATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCCTGGATAGGAAGCACTaGAGACAGCACCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLLDRKH*RQHLSV
Trigger: CACTGACAGGTGCTGTCTCCAGTGCTTCCTATCCAG...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GTATCCAGTGGGGAGTGGCTTCACTTGTCTCTTGTTGACTTATTAGAACAGTCTATCTCTACAAGGCCATaGTTTTCTACCTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: VSSGEWLHLSLVDLLEQSISTRP*FSTLLE
Trigger: CTCCAACAAGGTAGAAAACCATGGCCTTGTAGAGAT...AGACTGTTCTAATAAGTCAACAAGAGACAAGTGAAGCCACTCCCCACTGGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAACAAGTTCTTTGTGACTaGATGATTCTGTATGTACCA +
Preference number: 4 (lower is better)
Translates to: AERTSLLHLLQASDWCQEQVLCD*MILYVP
Trigger: TGGTACATACAGAATCATCCAGTCACAAAGAACTTG...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp GACAGGAGTTTGAAGAAGAAACCACAAAGGAAAGTGCTTATTGGCTGGCTTCTTCATAAATTCATCCAGTaGCGATATTCATCACGCCCA +
Preference number: 4 (lower is better)
Translates to: DRSLKKKPQRKVLIGWLLHKFIQ*RYSSRP
Trigger: TGGGCGTGATGAATATCGTCACTGGATGAATTTATG...AAGAAGCCAGCCAATAAGCACTTTCCTTTGTGGTTTCTTCTTCAAACTCCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR TCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCTCTACCTTGTTGGAGTaGAGGCTTATGAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLSTLLE*RLMRSQ
Trigger: CTGGGACCTCATAAGCCTTCACTCCAACAAGGTAGA...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp TTCAATACAAACTCTTCTTCTGGATTAGTTAAACAGCAGAGAGAACAAGCCTTCGTCAGGCTGAAGCACTaGTGGGGTAACAGAATGAAG +
Preference number: 4 (lower is better)
Translates to: FNTNSSSGLVKQQREQAFVRLKH*WGNRMK
Trigger: CTTCATTCTGTTACCCCAGCAGTGCTTCAGCCTGAC...GAAGGCTTGTTCTCTCTGCTGTTTAACTAATCCAGAAGAAGAGTTTGTATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR GCA 90 bp TTCAATACAAACTCTTCTTCTGGATTAGTTAAACAGCAGAGAGAACAAGCCTTCAACCACCAATGCTCCTaGAGTCTGGGTGTGACTCAA +
Preference number: 4 (lower is better)
Translates to: FNTNSSSGLVKQQREQAFNHQCS*SLGVTQ
Trigger: TTGAGTCACACCCAGACTGCAGGAGCATTGGTGGTT...GAAGGCTTGTTCTCTCTGCTGTTTAACTAATCCAGAAGAAGAGTTTGTATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCTACAGGCCTGAAACTTaGAAGGGTTGGCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLYRPET*KGWPHH
Trigger: GTGATGAGGCCAACCCTTGCAAGTTTCAGGCCTGTA...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp TTCAATACAAACTCTTCTTCTGGATTAGTTAAACAGCAGAGAGAACAAGCCTTCTACAGGCCTGAAACTTaGAAGGGTTGGCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: FNTNSSSGLVKQQREQAFYRPET*KGWPHH
Trigger: GTGATGAGGCCAACCCTTGCAAGTTTCAGGCCTGTA...GAAGGCTTGTTCTCTCTGCTGTTTAACTAATCCAGAAGAAGAGTTTGTATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCAGAAGAGGTCAGATGTaGTGTGGACAAGAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLRRGQM*CGQESR
Trigger: ACGGCTCTCTTGTCCACACCACATCTGACCTCTTCT...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GGCCTTTCTACATCAATTAATAATCAAGAAAAAGGCCCACTGGTATGTCCACAAAACTCCTCACAGTGTTaGCCTCGATACCACCAGTTT +
Preference number: 4 (lower is better)
Translates to: GLSTSINNQEKGPLVCPQNSSQC*PRYHQF
Trigger: AAACTGGTGGTATCGAGGCCAACACTGTGAGGAGTT...TTGTGGACATACCAGTGGGCCTTTTTCTTGATTATTAATTGATGTAGAAAGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTCTTGAATTTCCTCTTTaGAAAGGTCGCTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: VKQQREQAFSISSKLLIGLEFPL*KGRYFH
Trigger: ATGAAAGTAGCGACCTTTCCAAAGAGGAAATTCAAG...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp TTCAATACAAACTCTTCTTCTGGATTAGTTAAACAGCAGAGAGAACAAGCCTTCAGCCAGGTAACCCTGTaGATGCTTTTTCAACCTCTG +
Preference number: 4 (lower is better)
Translates to: FNTNSSSGLVKQQREQAFSQVTL*MLFQPL
Trigger: CAGAGGTTGAAAAAGCATTCACAGGGTTACCTGGCT...GAAGGCTTGTTCTCTCTGCTGTTTAACTAATCCAGAAGAAGAGTTTGTATTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp GACAGGAGTTTGAAGAAGAAACCACAAAGGAAAGTGCTTATTGGCTGGCTTCTTATCCTCATTCTCTCTTaGATTTCCTCTTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: DRSLKKKPQRKVLIGWLLILILS*ISSLER
Trigger: CCTTTCCAAAGAGGAAATTCAAGAGAGAATGAGGAT...AAGAAGCCAGCCAATAAGCACTTTCCTTTGTGGTTTCTTCTTCAAACTCCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR GCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCCTACAAATGGCTCCATaGCCAGGCATAATGTCACAC +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLLQMAP*PGIMSH
Trigger: GTGTGACATTATGCCTGGGCATGGAGCCATTTGTAG...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GTATGGTGGTGTAAATATGTTTGGCCCAGGGAGTGGCACTATTTGAAAGTATGGCAAGTTCTTTGTGACTaGATGATTCTGTATGTACCA +
Preference number: 4 (lower is better)
Translates to: VWWCKYVWPREWHYLKVWQVLCD*MILYVP
Trigger: TGGTACATACAGAATCATCCAGTCACAAAGAACTTG...CCATACTTTCAAATAGTGCCACTCCCTGGGCCAAACATATTTACACCACCATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCCTGATTCTGGCAACATaGTCCACACAGGCTGCATAT +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLLILAT*STQAAY
Trigger: ATATGCAGCCTGTGTGGACCATGTTGCCAGAATCAG...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCCAGTGGACTGTGTCATaGAAGCTTTCAACCAGAGTC +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLQWTVS*KLSTRV
Trigger: GACTCTGGTTGAAAGCTTCCATGACACAGTCCACTG...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCGAAACTTGCAAGGGTTaGCCTCATCACCTGATTCCA +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLETCKG*PHHLIP
Trigger: TGGAATCAGGTGATGAGGCCAACCCTTGCAAGTTTC...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp TTCAATACAAACTCTTCTTCTGGATTAGTTAAACAGCAGAGAGAACAAGCCTTCGAAACTTGCAAGGGTTaGCCTCATCACCTGATTCCA +
Preference number: 4 (lower is better)
Translates to: FNTNSSSGLVKQQREQAFETCKG*PHHLIP
Trigger: TGGAATCAGGTGATGAGGCCAACCCTTGCAAGTTTC...GAAGGCTTGTTCTCTCTGCTGTTTAACTAATCCAGAAGAAGAGTTTGTATTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCACTGCATTGATGAGCTaGAGAGACTTGGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLTALMS*RDLGSG
Trigger: TCCAGATCCCAAGTCTCTCCAGCTCATCAATGCAGT...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCTCTTTTGGCACAGGTTaGATTAATGGGCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLSFGTG*INGLEG
Trigger: GCCTTCAAGCCCATTAATTCAACCTGTGCCAAAAGA...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp TTCAATACAAACTCTTCTTCTGGATTAGTTAAACAGCAGAGAGAACAAGCCTTCCAATGCTGCCGTTTCTaGAACTCAGGATTTCTAGGT +
Preference number: 4 (lower is better)
Translates to: FNTNSSSGLVKQQREQAFQCCRF*NSGFLG
Trigger: ACCTAGAAATCCTGAGTTTCAGAAACGGCAGCATTG...GAAGGCTTGTTCTCTCTGCTGTTTAACTAATCCAGAAGAAGAGTTTGTATTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCAGATCACAGAGACTTTaGCAAGGCAGTTCATCCACA +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLRSQRL*QGSSST
Trigger: TGTGGATGAACTGCCTTGTCAAAGTCTCTGTGATCT...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GGCCTTTCTACATCAATTAATAATCAAGAAAAAGGCCCACTGGTATGTCCACAAGAGAGACTTGGGATCTaGATTCAAAGAGGAATTTCC +
Preference number: 4 (lower is better)
Translates to: GLSTSINNQEKGPLVCPQERLGI*IQRGIS
Trigger: GGAAATTCCTCTTTGAATCCAGATCCCAAGTCTCTC...TTGTGGACATACCAGTGGGCCTTTTTCTTGATTATTAATTGATGTAGAAAGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCCGATATCCAAGTTCATaGTTTGGTAGGCAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLRYPSS*FGRQWY
Trigger: GTACCACTGCCTACCAAACCATGAACTTGGATATCG...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp TTCAATACAAACTCTTCTTCTGGATTAGTTAAACAGCAGAGAGAACAAGCCTTCGTAGCATTTGCACTTTaGTTCTCCACTCCATGGATT +
Preference number: 4 (lower is better)
Translates to: FNTNSSSGLVKQQREQAFVAFAL*FSTPWI
Trigger: AATCCATGGAGTGGAGAAGCAAAGTGCAAATGCTAC...GAAGGCTTGTTCTCTCTGCTGTTTAACTAATCCAGAAGAAGAGTTTGTATTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR GCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCCAAGTGGCTCTCATATaGAGGGTTATACTTCATAGC +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLQVALI*RVILHS
Trigger: GCTATGAAGTATAACCCTGCATATGAGAGCCACTTG...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCGAGAGACTTGGGATCTaGATTCAAAGAGGAATTTCC +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLERLGI*IQRGIS
Trigger: GGAAATTCCTCTTTGAATCCAGATCCCAAGTCTCTC...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCTGGTTTGGTAGGCAGTaGTACAAAAGTCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLWFGRQ*YKSLPE
Trigger: TTCTGGAAGACTTTTGTACCACTGCCTACCAAACCA...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp TTCAATACAAACTCTTCTTCTGGATTAGTTAAACAGCAGAGAGAACAAGCCTTCTGCTTTTTCAACCTCTaGAATAAACTCTTCCACGAG +
Preference number: 4 (lower is better)
Translates to: FNTNSSSGLVKQQREQAFCFFNL*NKLFHE
Trigger: CTCGTGGAAGAGTTTATTTCAGAGGTTGAAAAAGCA...GAAGGCTTGTTCTCTCTGCTGTTTAACTAATCCAGAAGAAGAGTTTGTATTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp TTCAATACAAACTCTTCTTCTGGATTAGTTAAACAGCAGAGAGAACAAGCCTTCTTTCATACATCTGTCTaGTTTCTTCTCTGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: FNTNSSSGLVKQQREQAFFHTSV*FLLCSD
Trigger: GTCTGAGCAGAGAAGAAATCAGACAGATGTATGAAA...GAAGGCTTGTTCTCTCTGCTGTTTAACTAATCCAGAAGAAGAGTTTGTATTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCCTGCAACGGTTTCACTaGAGCAAATTTTTACTCCAT +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLLQRFH*SKFLLH
Trigger: ATGGAGTAAAAATTTGCTCCAGTGAAACCGTTGCAG...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR TCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCAAGCCAGTTTCTTCATaGTTAGGTTTCTATGTTCCA +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLKPVSS*LGFYVP
Trigger: TGGAACATAGAAACCTAATCATGAAGAAACTGGCTT...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CCA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCTTGTATAGACAGCAGTaGGTTTATCATCCATCTCTA +
Preference number: 4 (lower is better)
Translates to: VGMRSASHVSLFILQYKLLYRQQ*VYHPSL
Trigger: TAGAGATGGATGATAAACCCACTGCTGTCTATACAA...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 90 bp CAGCTGGTTGTGTGGGCTCCTCTGTCACATTCTCAATTTCATTGCTaGTACTCTCCTGCGGTGACGCTGCGCTGCTCTCCGAAGCCAACC +
Preference number: 5 (lower is better)
Translates to: QLVVWAPLSHSQFHC*YSPAVTLRCSPKPT
Trigger: GGTTGGCTTCGGAGAGCAGCGCAGCGTCACCGCAGGAGAGTATCAGCAATGAAATTGAGAATGTGACAGAGGAGCCCACACAACCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS GCA 90 bp CTTCTAAGCAGCCACCTCCTCCCAGTCTCCGTGGCATCCAAAAGCTaGCTCTTCCTGGTAGGCAGGGAAAGGTCTGTTGACTTCTCAGGT +
Preference number: 5 (lower is better)
Translates to: LLSSHLLPVSVASKS*LFLVGRERSVDFSG
Trigger: ACCTGAGAAGTCAACAGACCTTTCCCTGCCTACCAGGAAGAGGCAGCTTTTGGATGCCACGGAGACTGGGAGGAGGTGGCTGCTTAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 90 bp TGTCAGGGTGCCTGCTGGAGCTGGTGGGCCTCTGCCTTTCTCTCCTaGCATTCTGAGCTTGAAGCATCTTCACAAGGAAGAAGACGACAG +
Preference number: 5 (lower is better)
Translates to: CQGACWSWWASAFLS*HSELEASSQGRRRQ
Trigger: CTGTCGTCTTCTTCCTTGTGAAGATGCTTCAAGCTCAGAATGTCAGGAGAGAAAGGCAGAGGCCCACCAGCTCCAGCAGGCACCCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 90 bp AACGATCCAGAAGTCCTTCCCTCAGGAGCCACAGGCAGGTCAGGCTaGAGCACTGCATTGATGAGCTGGAGAGACTTGGGATCTGGATTC +
Preference number: 5 (lower is better)
Translates to: NDPEVLPSGATGRSG*STALMSWRDLGSGF
Trigger: GAATCCAGATCCCAAGTCTCTCCAGCTCATCAATGCAGTGCTTCAGCCTGACCTGCCTGTGGCTCCTGAGGGAAGGACTTCTGGATCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000160116.8
CDS CCA 90 bp CTGGAGGGATCCCGCAGTTCTTCACTGTATCGCTTCCCCAGAAGTTaGATGCTGAATTCCGCAATCTGTTCAGCAGCTGGTTGTGTGGGC +
Preference number: 5 (lower is better)
Translates to: LEGSRSSSLYRFPRS*MLNSAICSAAGCVG
Trigger: GCCCACACAACCAGCTGCTGAACAGATTGCGGAATTCAGCATCCAACTTCTGGGGAAGCGATACAGTGAAGAACTGCGGGATCCCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp CCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCAGTTTAAGGTCCCAGGTGGTATaGCTGATGGCTTCGCCATTG +
Preference number: 5 (lower is better)
Translates to: PISPPLGRVLCVHNALSLRSQVV*LMASPL
Trigger: CAATGGCGAAGCCATCAGCAATACCACCTGGGACCT...TAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS TCA 90 bp AGCCAACCCTGGATAGGAAGCACTGGAGACAGCACCTGTCAGTGTTaGGGTCTCACCAATAGGAACTGGAAAGGACAACTCAGGCCCACA +
Preference number: 5 (lower is better)
Translates to: SQPWIGSTGDSTCQC*GLTNRNWKGQLRPT
Trigger: TGTGGGCCTGAGTTGTCCTTTCCAGTTCCTATTGGTGAGACCTCAACACTGACAGGTGCTGTCTCCAGTGCTTCCTATCCAGGGTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 90 bp CTCCTCTGTCACATTCTCAATTTCATTGCTGATACTCTCCTGCGGTaGCGCTGCGCTGCTCTCCGAAGCCAACCCTGGATAGGAAGCACT +
Preference number: 5 (lower is better)
Translates to: LLCHILNFIADTLLR*RCAALRSQPWIGST
Trigger: AGTGCTTCCTATCCAGGGTTGGCTTCGGAGAGCAGCGCAGCGTCACCGCAGGAGAGTATCAGCAATGAAATTGAGAATGTGACAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 90 bp GATCCCGCAGTTCTTCACTGTATCGCTTCCCCAGAAGTTGGATGCTaGATTCCGCAATCTGTTCAGCAGCTGGTTGTGTGGGCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: DPAVLHCIASPEVGC*IPQSVQQLVVWAPL
Trigger: CAGAGGAGCCCACACAACCAGCTGCTGAACAGATTGCGGAATTCAGCATCCAACTTCTGGGGAAGCGATACAGTGAAGAACTGCGGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 90 bp GTGGCTCTCATATGCAGGGTTATACTTCATAGCATTCTCAACAGATaGCAGACTGTCAGGGTGCCTGCTGGAGCTGGTGGGCCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: VALICRVILHSILNR*QTVRVPAGAGGPLP
Trigger: AGGCAGAGGCCCACCAGCTCCAGCAGGCACCCTGACAGTCTGTCATCTGTTGAGAATGCTATGAAGTATAACCCTGCATATGAGAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS GCA 90 bp CAACATGTTTGTCACGCGGAGGCTGAAGAAAACCACCAATGCTCCTaGAGTCTGGGTGTGACTCAAGACACCTCCTTTTGTGGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: QHVCHAEAEENHQCS*SLGVTQDTSFCGQS
Trigger: GCTCTGCCCACAAAAGGAGGTGTCTTGAGTCACACCCAGACTGCAGGAGCATTGGTGGTTTTCTTCAGCCTCCGCGTGACAAACATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp CCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCAGTTTACTCGATACCACCAGTTaGAACCAACCCGGCATCTAC +
Preference number: 5 (lower is better)
Translates to: PISPPLGRVLCVHNALSLLDTTS*NQPGIY
Trigger: GTAGATGCCGGGTTGGTTCAAACTGGTGGTATCGAG...TAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS GCA 90 bp GAGGTCCCAGGTGGTATTGCTGATGGCTTCGCCATTGAAGGTAACTaGATAGTGAACATCTATCCCACTGTCATTTTCCTCCGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: EVPGGIADGFAIEGN*IVNIYPTVIFLRGP
Trigger: AGGGCCCCGGAGGAAAATGACAGTGGGATAGATGTTCACTATGCAGTTACCTTCAATGGCGAAGCCATCAGCAATACCACCTGGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTGCAGGGAAAGGTCTGTaGACTTCTCAGGTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: KSESEALQPQLQGLALSFAGKGL*TSQVRG
Trigger: TCCTCTCACCTGAGAAGTCAACAGACCTTTCCCTGC...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 90 bp TTCCACAGAGGTGTCTGGAAACCATGGGATCACTTCCAACTGGTCTaGGATGTTGGAAGCCAAGGACTCCAAGCCAGAAGGTGTCCCTAT +
Preference number: 5 (lower is better)
Translates to: FHRGVWKPWDHFQLV*DVGSQGLQARRCPY
Trigger: ATAGGGACACCTTCTGGCTTGGAGTCCTTGGCTTCCAACATCTCAGACCAGTTGGAAGTGATCCCATGGTTTCCAGACACCTCTGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 90 bp CACAGCCTCTGCAACGGTTTCACTGGAGCAAATTTTTACTCCATTTaGGAACAGAATAGATCGCCGCCTTCTAAGCAGCCACCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: HSLCNGFTGANFYSI*EQNRSPPSKQPPPP
Trigger: GGGAGGAGGTGGCTGCTTAGAAGGCGGCGATCTATTCTGTTCCCAAATGGAGTAAAAATTTGCTCCAGTGAAACCGTTGCAGAGGCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTAATACTTCACATGGTTaGCCACAGCCTCTGCAACGG +
Preference number: 5 (lower is better)
Translates to: KSESEALQPQLQGLALSFNTSHG*PQPLQR
Trigger: CCGTTGCAGAGGCTGTGGCAAACCATGTGAAGTATT...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTTGCTCTCTGGTGTACTaGCCAATGTGTCTCTGGACA +
Preference number: 5 (lower is better)
Translates to: KSESEALQPQLQGLALSFCSLVY*PMCLWT
Trigger: TGTCCAGAGACACATTGGCAAGTACACCAGAGAGCA...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAAGGGTGGAGTGGGTGGTaGAAGGCAATTCAGTGGACT +
Preference number: 5 (lower is better)
Translates to: AERTSLLHLLQASDWCQEGWSGW*KAIQWT
Trigger: AGTCCACTGAATTGCCTTCAACCACCCACTCCACCC...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS GCA 90 bp AGGGAAAGGTCTGTTGACTTCTCAGGTGAGAGGACAGAGACGGCATaGATGGGTTCTTGTCTCTCTTCTGAGGCTGATACAAGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: RERSVDFSGERTETA*MGSCLSSEADTRFP
Trigger: AGGAAACCTTGTATCAGCCTCAGAAGAGAGACAAGAACCCATGCATGCCGTCTCTGTCCTCTCACCTGAGAAGTCAACAGACCTTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 90 bp AAAGGTCTGTTGACTTCTCAGGTGAGAGGACAGAGACGGCATGCATaGGTTCTTGTCTCTCTTCTGAGGCTGATACAAGGTTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: KGLLTSQVRGQRRHA*VLVSLLRLIQGFLL
Trigger: CAGGAGGAAACCTTGTATCAGCCTCAGAAGAGAGACAAGAACCCATGCATGCCGTCTCTGTCCTCTCACCTGAGAAGTCAACAGACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 90 bp ATATCCTGGACCGCCATTATTACTTCCTCCTCTAGCTGGGTGGAGTaGGTGGTTGAAGGCAATTCAGTGGACTGTGTCATGGAAGCTTTC +
Preference number: 5 (lower is better)
Translates to: ISWTAIITSSSSWVE*VVEGNSVDCVMEAF
Trigger: GAAAGCTTCCATGACACAGTCCACTGAATTGCCTTCAACCACCCACTCCACCCAGCTAGAGGAGGAAGTAATAATGGCGGTCCAGGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 90 bp GTGATGCCTATGACAAAGGGCTCAGACACAAACTCCTCACAGTGTTaGCCTCGATACCACCAGTTTGAACCAACCCGGCATCTACAAATG +
Preference number: 5 (lower is better)
Translates to: VMPMTKGSDTNSSQC*PRYHQFEPTRHLQM
Trigger: CATTTGTAGATGCCGGGTTGGTTCAAACTGGTGGTATCGAGGCCAACACTGTGAGGAGTTTGTGTCTGAGCCCTTTGTCATAGGCATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS GCA 90 bp CGATACCACCAGTTTGAACCAACCCGGCATCTACAAATGGCTCCATaGCCAGGCATAATGTCACACTTTCCATCGTTCAAGCAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: RYHQFEPTRHLQMAP*PGIMSHFPSFKQKS
Trigger: TGACTTCTGCTTGAACGATGGAAAGTGTGACATTATGCCTGGGCATGGAGCCATTTGTAGATGCCGGGTTGGTTCAAACTGGTGGTATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 90 bp ATGAAATATCCTGGACCGCCATTATTACTTCCTCCTCTAGCTGGGTaGAGTGGGTGGTTGAAGGCAATTCAGTGGACTGTGTCATGGAAG +
Preference number: 5 (lower is better)
Translates to: MKYPGPPLLLPPLAG*SGWLKAIQWTVSWK
Trigger: CTTCCATGACACAGTCCACTGAATTGCCTTCAACCACCCACTCCACCCAGCTAGAGGAGGAAGTAATAATGGCGGTCCAGGATATTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp GTATGGTGGTGTAAATATGTTTGGCCCAGGGAGTGGCACTATTTGAAAGTATGGGGGTGGAGTGGGTGGTaGAAGGCAATTCAGTGGACT +
Preference number: 5 (lower is better)
Translates to: VWWCKYVWPREWHYLKVWGWSGW*KAIQWT
Trigger: AGTCCACTGAATTGCCTTCAACCACCCACTCCACCC...CCATACTTTCAAATAGTGCCACTCCCTGGGCCAAACATATTTACACCACCATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CAA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAAAAACTCCTCACAGTGTaGGCCTCGATACCACCAGTT +
Preference number: 5 (lower is better)
Translates to: AERTSLLHLLQASDWCQEKLLTV*ASIPPV
Trigger: AACTGGTGGTATCGAGGCCAACACTGTGAGGAGTTT...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTCCTGACATTCTGAGCTaGAAGCATCTTCACAAGGAA +
Preference number: 5 (lower is better)
Translates to: KSESEALQPQLQGLALSFPDILS*KHLHKE
Trigger: TTCCTTGTGAAGATGCTTCAAGCTCAGAATGTCAGG...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 90 bp TTATCATCCATCTCTACAAGGCCATGGTTTTCTACCTTGTTGGAGTaGAGGCTTATGAGGTCCCAGGTGGTATTGCTGATGGCTTCGCCA +
Preference number: 5 (lower is better)
Translates to: LSSISTRPWFSTLLE*RLMRSQVVLLMASP
Trigger: TGGCGAAGCCATCAGCAATACCACCTGGGACCTCATAAGCCTTCACTCCAACAAGGTAGAAAACCATGGCCTTGTAGAGATGGATGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS GCA 90 bp GATGGCTTCCTGGCACACTCGGGCTTTAAAATACTTCACATGGTTTaGCACAGCCTCTGCAACGGTTTCACTGGAGCAAATTTTTACTCC +
Preference number: 5 (lower is better)
Translates to: DGFLAHSGFKILHMV*HSLCNGFTGANFYS
Trigger: GGAGTAAAAATTTGCTCCAGTGAAACCGTTGCAGAGGCTGTGGCAAACCATGTGAAGTATTTTAAAGCCCGAGTGTGCCAGGAAGCCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 90 bp TCCCAGATGGCTTCCTGGCACACTCGGGCTTTAAAATACTTCACATaGTTTGCCACAGCCTCTGCAACGGTTTCACTGGAGCAAATTTTT +
Preference number: 5 (lower is better)
Translates to: SQMASWHTRALKYFT*FATASATVSLEQIF
Trigger: AAAAATTTGCTCCAGTGAAACCGTTGCAGAGGCTGTGGCAAACCATGTGAAGTATTTTAAAGCCCGAGTGTGCCAGGAAGCCATCTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 90 bp CTTCCCCAGAAGTTGGATGCTGAATTCCGCAATCTGTTCAGCAGCTaGTTGTGTGGGCTCCTCTGTCACATTCTCAATTTCATTGCTGAT +
Preference number: 5 (lower is better)
Translates to: LPQKLDAEFRNLFSS*LCGLLCHILNFIAD
Trigger: ATCAGCAATGAAATTGAGAATGTGACAGAGGAGCCCACACAACCAGCTGCTGAACAGATTGCGGAATTCAGCATCCAACTTCTGGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 90 bp CTAAGGAAGAAGTTCTTGTCCAAACTGTATCTGATTCTGGCAACATaGTCCACACAGGCTGCATATCTGGCCTTGACACTGGAACCTCAC +
Preference number: 5 (lower is better)
Translates to: LRKKFLSKLYLILAT*STQAAYLALTLEPH
Trigger: GTGAGGTTCCAGTGTCAAGGCCAGATATGCAGCCTGTGTGGACCATGTTGCCAGAATCAGATACAGTTTGGACAAGAACTTCTTCCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 90 bp TCTAATGAAATATCCTGGACCGCCATTATTACTTCCTCCTCTAGCTaGGTGGAGTGGGTGGTTGAAGGCAATTCAGTGGACTGTGTCATG +
Preference number: 5 (lower is better)
Translates to: SNEISWTAIITSSSS*VEWVVEGNSVDCVM
Trigger: CATGACACAGTCCACTGAATTGCCTTCAACCACCCACTCCACCCAGCTAGAGGAGGAAGTAATAATGGCGGTCCAGGATATTTCATTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp GTATGGTGGTGTAAATATGTTTGGCCCAGGGAGTGGCACTATTTGAAAGTATGGGCTGCATATCTGGCCTaGACACTGGAACCTCACTGT +
Preference number: 5 (lower is better)
Translates to: VWWCKYVWPREWHYLKVWAAYLA*TLEPHC
Trigger: ACAGTGAGGTTCCAGTGTCAAGGCCAGATATGCAGC...CCATACTTTCAAATAGTGCCACTCCCTGGGCCAAACATATTTACACCACCATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CAA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTTGCTCTCTGGTGTACTaGCCAATGTGTCTCTGGACA +
Preference number: 5 (lower is better)
Translates to: VKQQREQAFSISSKLLIGCSLVY*PMCLWT
Trigger: TGTCCAGAGACACATTGGCAAGTACACCAGAGAGCA...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGGAACCCTGACAGATTaGACTGGAGATAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: VKQQREQAFSISSKLLIGGTLTD*TGDREP
Trigger: TGGTTCCCTATCTCCAGTCAAATCTGTCAGGGTTCC...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 90 bp AAGTATCTTCTAATTCTTCAGTGCTGGCTAACCCATCTTCTAATATaGACGATCCAGAAGTCCTTCCCTCAGGAGCCACAGGCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: KYLLILQCWLTHLLI*TIQKSFPQEPQAGQ
Trigger: CTGACCTGCCTGTGGCTCCTGAGGGAAGGACTTCTGGATCGTTCATATTAGAAGATGGGTTAGCCAGCACTGAAGAATTAGAAGATACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTATGAGCTGGAGAGACTaGGGATCTGGATTCAAAGAG +
Preference number: 5 (lower is better)
Translates to: VKQQREQAFSISSKLLIGMSWRD*GSGFKE
Trigger: CTCTTTGAATCCAGATCCCAAGTCTCTCCAGCTCAT...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp AAGTCAGAGTCAGAGGCACTGCAGCCCCAACTCCAAGGTCTGGCTTTAAGCTTTTGTACCATATCTTCCTaGAGTACCTCATCTGTTTTC +
Preference number: 5 (lower is better)
Translates to: KSESEALQPQLQGLALSFCTISS*STSSVF
Trigger: GAAAACAGATGAGGTACTCAAGGAAGATATGGTACA...AAAGCTTAAAGCCAGACCTTGGAGTTGGGGCTGCAGTGCCTCTGACTCTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp CCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTCAGTTTACTAAGGAAGAAGTTCTaGTCCAAACTGTATCTGATT +
Preference number: 5 (lower is better)
Translates to: PISPPLGRVLCVHNALSLLRKKF*SKLYLI
Trigger: AATCAGATACAGTTTGGACAAGAACTTCTTCCTTAG...TAAACTGAGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CAA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGGTAGCATTTGCACTTaGCTTCTCCACTCCATGGAT +
Preference number: 5 (lower is better)
Translates to: VKQQREQAFSISSKLLIGGSICT*LLHSMD
Trigger: ATCCATGGAGTGGAGAAGCAAAGTGCAAATGCTACC...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp ATATCCTCCCATCTCCCCACCTCTGGGCAGGGTACTTTGCGTACACAATGCTCTAATCCTCATTCTCTCTaGAATTTCCTCTTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: ISSHLPTSGQGTLRTQCSNPHSL*NFLFGK
Trigger: CTTTCCAAAGAGGAAATTCAAGAGAGAATGAGGATT...AGAGCATTGTGTACGCAAAGTACCCTGCCCAGAGGTGGGGAGATGGGAGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS GCA 90 bp GCACACTCGGGCTTTAAAATACTTCACATGGTTTGCCACAGCCTCTaGAACGGTTTCACTGGAGCAAATTTTTACTCCATTTGGGAACAG +
Preference number: 5 (lower is better)
Translates to: AHSGFKILHMVCHSL*NGFTGANFYSIWEQ
Trigger: CTGTTCCCAAATGGAGTAAAAATTTGCTCCAGTGAAACCGTTGCAGAGGCTGTGGCAAACCATGTGAAGTATTTTAAAGCCCGAGTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 90 bp ACCAGAGTCTGTCAGTGCTCTCTGGTGTACTTGCCAATGTGTCTCTaGACAATTTCCCTAAGGAAGAAGTTCTTGTCCAAACTGTATCTG +
Preference number: 5 (lower is better)
Translates to: TRVCQCSLVYLPMCL*TISLRKKFLSKLYL
Trigger: CAGATACAGTTTGGACAAGAACTTCTTCCTTAGGGAAATTGTCCAGAGACACATTGGCAAGTACACCAGAGAGCACTGACAGACTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp GACAGGAGTTTGAAGAAGAAACCACAAAGGAAAGTGCTTATTGGCTGGCTTCTTAACTGGTCTGAGATGTaGGAAGCCAAGGACTCCAAG +
Preference number: 5 (lower is better)
Translates to: DRSLKKKPQRKVLIGWLLNWSEM*EAKDSK
Trigger: CTTGGAGTCCTTGGCTTCCAACATCTCAGACCAGTT...AAGAAGCCAGCCAATAAGCACTTTCCTTTGTGGTTTCTTCTTCAAACTCCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS CCA 90 bp CACCTGATTCCACGTCCAGGGAGTACTTATCGATATCCAAGTTCATaGTTTGGTAGGCAGTGGTACAAAAGTCTTCCAGAATCCTATACA +
Preference number: 5 (lower is better)
Translates to: HLIPRPGSTYRYPSS*FGRQWYKSLPESYT
Trigger: TGTATAGGATTCTGGAAGACTTTTGTACCACTGCCTACCAAACCATGAACTTGGATATCGATAAGTACTCCCTGGACGTGGAATCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCAGGTCCCAGGTGGTATaGCTGATGGCTTCGCCATTG +
Preference number: 5 (lower is better)
Translates to: VGMRSASHVSLFILQYKLRSQVV*LMASPL
Trigger: CAATGGCGAAGCCATCAGCAATACCACCTGGGACCT...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp GTATGGTGGTGTAAATATGTTTGGCCCAGGGAGTGGCACTATTTGAAAGTATGGAAAACTCCTCTCACATaGATGAGCTGGAGAGACTTG +
Preference number: 5 (lower is better)
Translates to: VWWCKYVWPREWHYLKVWKTPLT*MSWRDL
Trigger: CAAGTCTCTCCAGCTCATCAATGTGAGAGGAGTTTT...CCATACTTTCAAATAGTGCCACTCCCTGGGCCAAACATATTTACACCACCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS TCA 90 bp ATTTCAAATACACTTGTGACTCCATCCTCACATAAATTCATCCAGTaGCGATATTCATCACGCCCAGGAAGTCGATCCCAAAACGTCCTG +
Preference number: 5 (lower is better)
Translates to: ISNTLVTPSSHKFIQ*RYSSRPGSRSQNVL
Trigger: CAGGACGTTTTGGGATCGACTTCCTGGGCGTGATGAATATCGTCACTGGATGAATTTATGTGAGGATGGAGTCACAAGTGTATTTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 90 bp TGCATATCTGGCCTTGACACTGGAACCTCACTGTCAAGTTCTTTGTaGCTGGATGATTCTGTATGTACCATATCTTCCTTGAGTACCTCA +
Preference number: 5 (lower is better)
Translates to: CISGLDTGTSLSSSL*LDDSVCTISSLSTS
Trigger: TGAGGTACTCAAGGAAGATATGGTACATACAGAATCATCCAGTCACAAAGAACTTGACAGTGAGGTTCCAGTGTCAAGGCCAGATATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 90 bp ACTCAGGTACCCAGGGTAGCATTTGCACTTTGCTTCTCCACTCCATaGATTTACCAAACACTCAGAAAATTCATTACAGGCCTGAAACTT +
Preference number: 5 (lower is better)
Translates to: TQVPRVAFALCFSTP*IYQTLRKFITGLKL
Trigger: AAGTTTCAGGCCTGTAATGAATTTTCTGAGTGTTTGGTAAATCCATGGAGTGGAGAAGCAAAGTGCAAATGCTACCCTGGGTACCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCGCAGGGAAAGGTCTGTaGACTTCTCAGGTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: VGMRSASHVSLFILQYKLAGKGL*TSQVRG
Trigger: TCCTCTCACCTGAGAAGTCAACAGACCTTTCCCTGC...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp GTTAAACAGCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTGGTACTGTTTCTTTaGGCACAGGTTGAATTAATG +
Preference number: 5 (lower is better)
Translates to: VKQQREQAFSISSKLLIGVVLFL*AQVELM
Trigger: CATTAATTCAACCTGTGCCAAAAGAAACAGTACCAC...ACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGCTGTTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCGCTGCATATCTGGCCTaGACACTGGAACCTCACTGT +
Preference number: 5 (lower is better)
Translates to: VGMRSASHVSLFILQYKLAAYLA*TLEPHC
Trigger: ACAGTGAGGTTCCAGTGTCAAGGCCAGATATGCAGC...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp GCAGAGAGAACAAGCCTTCTCCATCTCCTCCAAGCTTCTGATTGGTGTCAAGAACTAAGGAAGAAGTTCTaGTCCAAACTGTATCTGATT +
Preference number: 5 (lower is better)
Translates to: AERTSLLHLLQASDWCQELRKKF*SKLYLI
Trigger: AATCAGATACAGTTTGGACAAGAACTTCTTCCTTAG...TTCTTGACACCAATCAGAAGCTTGGAGGAGATGGAGAAGGCTTGTTCTCTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp GGCCTTTCTACATCAATTAATAATCAAGAAAAAGGCCCACTGGTATGTCCACAAGGAACCCTGACAGATTaGACTGGAGATAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: GLSTSINNQEKGPLVCPQGTLTD*TGDREP
Trigger: TGGTTCCCTATCTCCAGTCAAATCTGTCAGGGTTCC...TTGTGGACATACCAGTGGGCCTTTTTCTTGATTATTAATTGATGTAGAAAGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS-3UTR CAA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCCTCGATACCACCAGTTaGAACCAACCCGGCATCTAC +
Preference number: 5 (lower is better)
Translates to: VGMRSASHVSLFILQYKLLDTTS*NQPGIY
Trigger: GTAGATGCCGGGTTGGTTCAAACTGGTGGTATCGAG...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp GACAGGAGTTTGAAGAAGAAACCACAAAGGAAAGTGCTTATTGGCTGGCTTCTTCCTGACATTCTGAGCTaGAAGCATCTTCACAAGGAA +
Preference number: 5 (lower is better)
Translates to: DRSLKKKPQRKVLIGWLLPDILS*KHLHKE
Trigger: TTCCTTGTGAAGATGCTTCAAGCTCAGAATGTCAGG...AAGAAGCCAGCCAATAAGCACTTTCCTTTGTGGTTTCTTCTTCAAACTCCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS GCA 90 bp CCTTGCCATGTTGTTCTTCAGTTAGCTCGGACTGATAATAATCTGTaGCTACCTGATCTAGTTCTAATGAAATATCCTGGACCGCCATTA +
Preference number: 5 (lower is better)
Translates to: PCHVVLQLARTDNNL*LPDLVLMKYPGPPL
Trigger: TAATGGCGGTCCAGGATATTTCATTAGAACTAGATCAGGTAGGCACAGATTATTATCAGTCCGAGCTAACTGAAGAACAACATGGCAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCAATACTTCACATGGTTaGCCACAGCCTCTGCAACGG +
Preference number: 5 (lower is better)
Translates to: VGMRSASHVSLFILQYKLNTSHG*PQPLQR
Trigger: CCGTTGCAGAGGCTGTGGCAAACCATGTGAAGTATT...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCAACTGGTCTGAGATGTaGGAAGCCAAGGACTCCAAG +
Preference number: 5 (lower is better)
Translates to: VGMRSASHVSLFILQYKLNWSEM*EAKDSK
Trigger: CTTGGAGTCCTTGGCTTCCAACATCTCAGACCAGTT...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 90 bp GTGTCAGAGTCTTCCATAGGTGGTACTGTTTCTTTTGGCACAGGTTaGATTAATGGGCTTGAAGGCAATCCATCAATAGAAGTATCTTCT +
Preference number: 5 (lower is better)
Translates to: VSESSIGGTVSFGTG*INGLEGNPSIEVSS
Trigger: AGAAGATACTTCTATTGATGGATTGCCTTCAAGCCCATTAATTCAACCTGTGCCAAAAGAAACAGTACCACCTATGGAAGACTCTGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCACATTCTCAATTTCATaGCTGATACTCTCCTGCGGT +
Preference number: 5 (lower is better)
Translates to: VGMRSASHVSLFILQYKLTFSIS*LILSCG
Trigger: ACCGCAGGAGAGTATCAGCAATGAAATTGAGAATGT...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp GTTGGAATGAGAAGTGCGTCCCATGTTTCCTTATTTATTCTTCAATACAAACTCGTGGTACTGTTTCTTTaGGCACAGGTTGAATTAATG +
Preference number: 5 (lower is better)
Translates to: VGMRSASHVSLFILQYKLVVLFL*AQVELM
Trigger: CATTAATTCAACCTGTGCCAAAAGAAACAGTACCAC...GAGTTTGTATTGAAGAATAAATAAGGAAACATGGGACGCACTTCTCATTCCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS-3UTR CAA 90 bp TTCAATACAAACTCTTCTTCTGGATTAGTTAAACAGCAGAGAGAACAAGCCTTCAATCCTCATTCTCTCTaGAATTTCCTCTTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: FNTNSSSGLVKQQREQAFNPHSL*NFLFGK
Trigger: CTTTCCAAAGAGGAAATTCAAGAGAGAATGAGGATT...GAAGGCTTGTTCTCTCTGCTGTTTAACTAATCCAGAAGAAGAGTTTGTATTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS GCA 72 bp AGCCACCTCCTCCCAGTCTCCGTGGCATCCAAAAGCTaGCTCTTCCTGGTAGGCAGGGAAAGGTCTGTTGAC +
Preference number: 6 (lower is better)
Translates to: SHLLPVSVASKS*LFLVGRERSVD
Trigger: GTCAACAGACCTTTCCCTGCCTACCAGGAAGAGGCAGCTTTTGGATGCCACGGAGACTGGGAGGAGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 72 bp CTCAGGAGCCACAGGCAGGTCAGGCTGAAGCACTGCTaGGGTAACAGAATGAAGAGTCAAGCTGCTACCCCC +
Preference number: 6 (lower is better)
Translates to: LRSHRQVRLKHC*GNRMKSQAATP
Trigger: GGGGGTAGCAGCTTGACTCTTCATTCTGTTACCCCAGCAGTGCTTCAGCCTGACCTGCCTGTGGCTCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS TCA 72 bp GGAGTTCCCTGCCAGTGGCTGAGGGAGAACTGGAGCTaGAACCAAATGGTGAAATGGTGGTGGTGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: GVPCQWLRENWS*NQMVKWWWWWW
Trigger: CCACCACCACCACCACCATTTCACCATTTGGTTTCAGCTCCAGTTCTCCCTCAGCCACTGGCAGGGAACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS CCA 72 bp CGCTGCTCTCCGAAGCCAACCCTGGATAGGAAGCACTaGAGACAGCACCTGTCAGTGTTGAGGTCTCACCAA +
Preference number: 6 (lower is better)
Translates to: RCSPKPTLDRKH*RQHLSVLRSHQ
Trigger: TTGGTGAGACCTCAACACTGACAGGTGCTGTCTCCAGTGCTTCCTATCCAGGGTTGGCTTCGGAGAGCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CAA 90 bp GCTGGAGGGATCCCGCAGTTCTTCACTGTATCGCTTCCCCAGAAGTaGGATGCTGAATTCCGCAATCTGTTCAGCAGCTGGTTGTGTGGG +
Preference number: 6 (lower is better)
Translates to: AGGIPQFFTVSLPQK*DAEFRNLFSSWLCG
Trigger: CCCACACAACCAGCTGCTGAACAGATTGCGGAATTCAGCATCCAACTTCTGGGGAAGCGATACAGTGAAGAACTGCGGGATCCCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 72 bp GCCTGCTGGAGCTGGTGGGCCTCTGCCTTTCTCTCCTaGCATTCTGAGCTTGAAGCATCTTCACAAGGAAGA +
Preference number: 6 (lower is better)
Translates to: ACWSWWASAFLS*HSELEASSQGR
Trigger: TCTTCCTTGTGAAGATGCTTCAAGCTCAGAATGTCAGGAGAGAAAGGCAGAGGCCCACCAGCTCCAGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 72 bp CACATTCTCAATTTCATTGCTGATACTCTCCTGCGGTaGCGCTGCGCTGCTCTCCGAAGCCAACCCTGGATA +
Preference number: 6 (lower is better)
Translates to: HILNFIADTLLR*RCAALRSQPWI
Trigger: TATCCAGGGTTGGCTTCGGAGAGCAGCGCAGCGTCACCGCAGGAGAGTATCAGCAATGAAATTGAGAATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 72 bp GGTGTCTGGAAACCATGGGATCACTTCCAACTGGTCTaGGATGTTGGAAGCCAAGGACTCCAAGCCAGAAGG +
Preference number: 6 (lower is better)
Translates to: GVWKPWDHFQLV*DVGSQGLQARR
Trigger: CCTTCTGGCTTGGAGTCCTTGGCTTCCAACATCTCAGACCAGTTGGAAGTGATCCCATGGTTTCCAGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 72 bp AAACTCCTCACAGTGTTGGCCTCGATACCACCAGTTTaGACCAACCCGGCATCTACAAATGGCTCCATGCCC +
Preference number: 6 (lower is better)
Translates to: KLLTVLASIPPV*TNPASTNGSMP
Trigger: GGGCATGGAGCCATTTGTAGATGCCGGGTTGGTTCAAACTGGTGGTATCGAGGCCAACACTGTGAGGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS GCA 72 bp TGTCACGCGGAGGCTGAAGAAAACCACCAATGCTCCTaGAGTCTGGGTGTGACTCAAGACACCTCCTTTTGT +
Preference number: 6 (lower is better)
Translates to: CHAEAEENHQCS*SLGVTQDTSFC
Trigger: ACAAAAGGAGGTGTCTTGAGTCACACCCAGACTGCAGGAGCATTGGTGGTTTTCTTCAGCCTCCGCGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CAA 72 bp CAAACTCCTCACAGTGTTGGCCTCGATACCACCAGTTaGAACCAACCCGGCATCTACAAATGGCTCCATGCC +
Preference number: 6 (lower is better)
Translates to: QTPHSVGLDTTS*NQPGIYKWLHA
Trigger: GGCATGGAGCCATTTGTAGATGCCGGGTTGGTTCAAACTGGTGGTATCGAGGCCAACACTGTGAGGAGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 72 bp TCCCGCAGTTCTTCACTGTATCGCTTCCCCAGAAGTTaGATGCTGAATTCCGCAATCTGTTCAGCAGCTGGT +
Preference number: 6 (lower is better)
Translates to: SRSSSLYRFPRS*MLNSAICSAAG
Trigger: ACCAGCTGCTGAACAGATTGCGGAATTCAGCATCCAACTTCTGGGGAAGCGATACAGTGAAGAACTGCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 72 bp GAAACCATGGGATCACTTCCAACTGGTCTGAGATGTTaGAAGCCAAGGACTCCAAGCCAGAAGGTGTCCCTA +
Preference number: 6 (lower is better)
Translates to: ETMGSLPTGLRC*KPRTPSQKVSL
Trigger: TAGGGACACCTTCTGGCTTGGAGTCCTTGGCTTCCAACATCTCAGACCAGTTGGAAGTGATCCCATGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 72 bp ACAGAGGTGTCTGGAAACCATGGGATCACTTCCAACTaGTCTGAGATGTTGGAAGCCAAGGACTCCAAGCCA +
Preference number: 6 (lower is better)
Translates to: TEVSGNHGITSN*SEMLEAKDSKP
Trigger: TGGCTTGGAGTCCTTGGCTTCCAACATCTCAGACCAGTTGGAAGTGATCCCATGGTTTCCAGACACCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 72 bp ACCGCCATTATTACTTCCTCCTCTAGCTGGGTGGAGTaGGTGGTTGAAGGCAATTCAGTGGACTGTGTCATG +
Preference number: 6 (lower is better)
Translates to: TAIITSSSSWVE*VVEGNSVDCVM
Trigger: CATGACACAGTCCACTGAATTGCCTTCAACCACCCACTCCACCCAGCTAGAGGAGGAAGTAATAATGGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 72 bp ATATCCTGGACCGCCATTATTACTTCCTCCTCTAGCTaGGTGGAGTGGGTGGTTGAAGGCAATTCAGTGGAC +
Preference number: 6 (lower is better)
Translates to: ISWTAIITSSSS*VEWVVEGNSVD
Trigger: GTCCACTGAATTGCCTTCAACCACCCACTCCACCCAGCTAGAGGAGGAAGTAATAATGGCGGTCCAGGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 72 bp ATGACAAAGGGCTCAGACACAAACTCCTCACAGTGTTaGCCTCGATACCACCAGTTTGAACCAACCCGGCAT +
Preference number: 6 (lower is better)
Translates to: MTKGSDTNSSQC*PRYHQFEPTRH
Trigger: ATGCCGGGTTGGTTCAAACTGGTGGTATCGAGGCCAACACTGTGAGGAGTTTGTGTCTGAGCCCTTTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CAA 72 bp ATCCCGCAGTTCTTCACTGTATCGCTTCCCCAGAAGTaGGATGCTGAATTCCGCAATCTGTTCAGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: IPQFFTVSLPQK*DAEFRNLFSSW
Trigger: CCAGCTGCTGAACAGATTGCGGAATTCAGCATCCAACTTCTGGGGAAGCGATACAGTGAAGAACTGCGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CAA 72 bp CTGGCAACATGGTCCACACAGGCTGCATATCTGGCCTaGACACTGGAACCTCACTGTCAAGTTCTTTGTGAC +
Preference number: 6 (lower is better)
Translates to: LATWSTQAAYLA*TLEPHCQVLCD
Trigger: GTCACAAAGAACTTGACAGTGAGGTTCCAGTGTCAAGGCCAGATATGCAGCCTGTGTGGACCATGTTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CAA 90 bp GAGGTGTCTGGAAACCATGGGATCACTTCCAACTGGTCTGAGATGTaGGAAGCCAAGGACTCCAAGCCAGAAGGTGTCCCTATGTCTTTA +
Preference number: 6 (lower is better)
Translates to: EVSGNHGITSNWSEM*EAKDSKPEGVPMSL
Trigger: TAAAGACATAGGGACACCTTCTGGCTTGGAGTCCTTGGCTTCCAACATCTCAGACCAGTTGGAAGTGATCCCATGGTTTCCAGACACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 72 bp TGGATAGGAAGCACTGGAGACAGCACCTGTCAGTGTTaGGGTCTCACCAATAGGAACTGGAAAGGACAACTC +
Preference number: 6 (lower is better)
Translates to: WIGSTGDSTCQC*GLTNRNWKGQL
Trigger: GAGTTGTCCTTTCCAGTTCCTATTGGTGAGACCTCAACACTGACAGGTGCTGTCTCCAGTGCTTCCTATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 72 bp GTTCTTCACTGTATCGCTTCCCCAGAAGTTGGATGCTaGATTCCGCAATCTGTTCAGCAGCTGGTTGTGTGG +
Preference number: 6 (lower is better)
Translates to: VLHCIASPEVGC*IPQSVQQLVVW
Trigger: CCACACAACCAGCTGCTGAACAGATTGCGGAATTCAGCATCCAACTTCTGGGGAAGCGATACAGTGAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 72 bp TGGCAACATGGTCCACACAGGCTGCATATCTGGCCTTaGCACTGGAACCTCACTGTCAAGTTCTTTGTGACT +
Preference number: 6 (lower is better)
Translates to: WQHGPHRLHIWP*HWNLTVKFFVT
Trigger: AGTCACAAAGAACTTGACAGTGAGGTTCCAGTGTCAAGGCCAGATATGCAGCCTGTGTGGACCATGTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 72 bp ACAGGCCTGAAACTTGCAAGGGTTGGCCTCATCACCTaGTTCCACGTCCAGGGAGTACTTATCGATATCCAA +
Preference number: 6 (lower is better)
Translates to: TGLKLARVGLIT*FHVQGVLIDIQ
Trigger: TTGGATATCGATAAGTACTCCCTGGACGTGGAATCAGGTGATGAGGCCAACCCTTGCAAGTTTCAGGCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 72 bp TTCAAGCAGAAGTCAGGCTGTAGATCACAGAGACTTTaGCAAGGCAGTTCATCCACACTCAGGTACCCAGGG +
Preference number: 6 (lower is better)
Translates to: FKQKSGCRSQRL*QGSSSTLRYPG
Trigger: CCCTGGGTACCTGAGTGTGGATGAACTGCCTTGTCAAAGTCTCTGTGATCTACAGCCTGACTTCTGCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 72 bp ATATGCAGGGTTATACTTCATAGCATTCTCAACAGATaGCAGACTGTCAGGGTGCCTGCTGGAGCTGGTGGG +
Preference number: 6 (lower is better)
Translates to: ICRVILHSILNR*QTVRVPAGAGG
Trigger: CCCACCAGCTCCAGCAGGCACCCTGACAGTCTGTCATCTGTTGAGAATGCTATGAAGTATAACCCTGCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 72 bp CCATTATTACTTCCTCCTCTAGCTGGGTGGAGTGGGTaGTTGAAGGCAATTCAGTGGACTGTGTCATGGAAG +
Preference number: 6 (lower is better)
Translates to: PLLLPPLAGWSG*LKAIQWTVSWK
Trigger: CTTCCATGACACAGTCCACTGAATTGCCTTCAACCACCCACTCCACCCAGCTAGAGGAGGAAGTAATAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CAA 72 bp AGAGAACTGAGGACCACCTTCGTGGGAGAAGCTAACTaGGAGGTAGACACTACGTCACGCAAAGCACTTTGT +
Preference number: 6 (lower is better)
Translates to: RELRTTFVGEAN*EVDTTSRKALC
Trigger: ACAAAGTGCTTTGCGTGACGTAGTGTCTACCTCCAAGTTAGCTTCTCCCACGAAGGTGGTCCTCAGTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS CAA 72 bp GTGGTACAAAAGTCTTCCAGAATCCTATACATGGCCTaGTTGACATTAGGAGGGGCAGACTCGGCGAACCTC +
Preference number: 6 (lower is better)
Translates to: VVQKSSRILYMA*LTLGGADSANL
Trigger: GAGGTTCGCCGAGTCTGCCCCTCCTAATGTCAACAAGGCCATGTATAGGATTCTGGAAGACTTTTGTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS GCA 72 bp GCAGTTCATCCACACTCAGGTACCCAGGGTAGCATTTaGACTTTGCTTCTCCACTCCATGGATTTACCAAAC +
Preference number: 6 (lower is better)
Translates to: AVHPHSGTQGSI*TLLLHSMDLPN
Trigger: GTTTGGTAAATCCATGGAGTGGAGAAGCAAAGTGCAAATGCTACCCTGGGTACCTGAGTGTGGATGAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS GCA 72 bp CAGTTTGAACCAACCCGGCATCTACAAATGGCTCCATaGCCAGGCATAATGTCACACTTTCCATCGTTCAAG +
Preference number: 6 (lower is better)
Translates to: QFEPTRHLQMAP*PGIMSHFPSFK
Trigger: CTTGAACGATGGAAAGTGTGACATTATGCCTGGGCATGGAGCCATTTGTAGATGCCGGGTTGGTTCAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 72 bp CAGAAAATTCATTACAGGCCTGAAACTTGCAAGGGTTaGCCTCATCACCTGATTCCACGTCCAGGGAGTACT +
Preference number: 6 (lower is better)
Translates to: QKIHYRPETCKG*PHHLIPRPGST
Trigger: AGTACTCCCTGGACGTGGAATCAGGTGATGAGGCCAACCCTTGCAAGTTTCAGGCCTGTAATGAATTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CAA 90 bp CCCCAGAAGTTGGATGCTGAATTCCGCAATCTGTTCAGCAGCTGGTaGTGTGGGCTCCTCTGTCACATTCTCAATTTCATTGCTGATACT +
Preference number: 6 (lower is better)
Translates to: PQKLDAEFRNLFSSW*CGLLCHILNFIADT
Trigger: AGTATCAGCAATGAAATTGAGAATGTGACAGAGGAGCCCACACAACCAGCTGCTGAACAGATTGCGGAATTCAGCATCCAACTTCTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CAA 90 bp TATCTGATTCTGGCAACATGGTCCACACAGGCTGCATATCTGGCCTaGACACTGGAACCTCACTGTCAAGTTCTTTGTGACTGGATGATT +
Preference number: 6 (lower is better)
Translates to: YLILATWSTQAAYLA*TLEPHCQVLCDWMI
Trigger: AATCATCCAGTCACAAAGAACTTGACAGTGAGGTTCCAGTGTCAAGGCCAGATATGCAGCCTGTGTGGACCATGTTGCCAGAATCAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CAA 90 bp CAGACCACCAATCACCTCTTCACTAGCAGAGCTATAGAAGGGATGTaGGCTATAGGATTTCTCATACAGTTCACATCCAGCCAAGTGGCT +
Preference number: 6 (lower is better)
Translates to: QTTNHLFTSRAIEGM*AIGFLIQFTSSQVA
Trigger: AGCCACTTGGCTGGATGTGAACTGTATGAGAAATCCTATAGCCAACATCCCTTCTATAGCTCTGCTAGTGAAGAGGTGATTGGTGGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 72 bp GTGGTGGTGGTGGTATCTGCTGAGAGCCATTCAGCTTaGAGGGTATTATCCAAAATAGAGGATGTTGTCACC +
Preference number: 6 (lower is better)
Translates to: VVVVVSAESHSA*RVLSKIEDVVT
Trigger: GGTGACAACATCCTCTATTTTGGATAATACCCTTCAAGCTGAATGGCTCTCAGCAGATACCACCACCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS CCA 72 bp AAGTTCTTGTCCAAACTGTATCTGATTCTGGCAACATaGTCCACACAGGCTGCATATCTGGCCTTGACACTG +
Preference number: 6 (lower is better)
Translates to: KFLSKLYLILAT*STQAAYLALTL
Trigger: CAGTGTCAAGGCCAGATATGCAGCCTGTGTGGACCATGTTGCCAGAATCAGATACAGTTTGGACAAGAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CAA 72 bp CTTTCAACCAGAGTCTGTCAGTGCTCTCTGGTGTACTaGCCAATGTGTCTCTGGACAATTTCCCTAAGGAAG +
Preference number: 6 (lower is better)
Translates to: LSTRVCQCSLVY*PMCLWTISLRK
Trigger: CTTCCTTAGGGAAATTGTCCAGAGACACATTGGCAAGTACACCAGAGAGCACTGACAGACTCTGGTTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CAA 90 bp TCATGGAAGCTTTCAACCAGAGTCTGTCAGTGCTCTCTGGTGTACTaGCCAATGTGTCTCTGGACAATTTCCCTAAGGAAGAAGTTCTTG +
Preference number: 6 (lower is better)
Translates to: SWKLSTRVCQCSLVY*PMCLWTISLRKKFL
Trigger: CAAGAACTTCTTCCTTAGGGAAATTGTCCAGAGACACATTGGCAAGTACACCAGAGAGCACTGACAGACTCTGGTTGAAAGCTTCCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 72 bp ACACTTGTGACTCCATCCTCACATAAATTCATCCAGTaGCGATATTCATCACGCCCAGGAAGTCGATCCCAA +
Preference number: 6 (lower is better)
Translates to: TLVTPSSHKFIQ*RYSSRPGSRSQ
Trigger: TTGGGATCGACTTCCTGGGCGTGATGAATATCGTCACTGGATGAATTTATGTGAGGATGGAGTCACAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 72 bp TGCAACGGTTTCACTGGAGCAAATTTTTACTCCATTTaGGAACAGAATAGATCGCCGCCTTCTAAGCAGCCA +
Preference number: 6 (lower is better)
Translates to: CNGFTGANFYSI*EQNRSPPSKQP
Trigger: TGGCTGCTTAGAAGGCGGCGATCTATTCTGTTCCCAAATGGAGTAAAAATTTGCTCCAGTGAAACCGTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 72 bp CTTGAACTTTGGGTGTTCCAAACTATGTCTTCTGTTTaGGGGAGCAAAACTCCTCTCACATTGATGAGCTGG +
Preference number: 6 (lower is better)
Translates to: LELWVFQTMSSV*GSKTPLTLMSW
Trigger: CCAGCTCATCAATGTGAGAGGAGTTTTGCTCCCCCAAACAGAAGACATAGTTTGGAACACCCAAAGTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS CCA 72 bp CCACGTCCAGGGAGTACTTATCGATATCCAAGTTCATaGTTTGGTAGGCAGTGGTACAAAAGTCTTCCAGAA +
Preference number: 6 (lower is better)
Translates to: PRPGSTYRYPSS*FGRQWYKSLPE
Trigger: TTCTGGAAGACTTTTGTACCACTGCCTACCAAACCATGAACTTGGATATCGATAAGTACTCCCTGGACGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CAA 72 bp TTGGATGCTGAATTCCGCAATCTGTTCAGCAGCTGGTaGTGTGGGCTCCTCTGTCACATTCTCAATTTCATT +
Preference number: 6 (lower is better)
Translates to: LDAEFRNLFSSW*CGLLCHILNFI
Trigger: AATGAAATTGAGAATGTGACAGAGGAGCCCACACAACCAGCTGCTGAACAGATTGCGGAATTCAGCATCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CAA 90 bp TACTTGCCAATGTGTCTCTGGACAATTTCCCTAAGGAAGAAGTTCTaGTCCAAACTGTATCTGATTCTGGCAACATGGTCCACACAGGCT +
Preference number: 6 (lower is better)
Translates to: YLPMCLWTISLRKKF*SKLYLILATWSTQA
Trigger: AGCCTGTGTGGACCATGTTGCCAGAATCAGATACAGTTTGGACAAGAACTTCTTCCTTAGGGAAATTGTCCAGAGACACATTGGCAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 72 bp GGATTTACCAAACACTCAGAAAATTCATTACAGGCCTaGAACTTGCAAGGGTTGGCCTCATCACCTGATTCC +
Preference number: 6 (lower is better)
Translates to: GFTKHSENSLQA*NLQGLASSPDS
Trigger: GGAATCAGGTGATGAGGCCAACCCTTGCAAGTTTCAGGCCTGTAATGAATTTTCTGAGTGTTTGGTAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 72 bp TGTCAGTGCTCTCTGGTGTACTTGCCAATGTGTCTCTaGACAATTTCCCTAAGGAAGAAGTTCTTGTCCAAA +
Preference number: 6 (lower is better)
Translates to: CQCSLVYLPMCL*TISLRKKFLSK
Trigger: TTTGGACAAGAACTTCTTCCTTAGGGAAATTGTCCAGAGACACATTGGCAAGTACACCAGAGAGCACTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 72 bp CCCAGGGTAGCATTTGCACTTTGCTTCTCCACTCCATaGATTTACCAAACACTCAGAAAATTCATTACAGGC +
Preference number: 6 (lower is better)
Translates to: PRVAFALCFSTP*IYQTLRKFITG
Trigger: GCCTGTAATGAATTTTCTGAGTGTTTGGTAAATCCATGGAGTGGAGAAGCAAAGTGCAAATGCTACCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CAA 72 bp GTCCAGGGAGTACTTATCGATATCCAAGTTCATGGTTaGGTAGGCAGTGGTACAAAAGTCTTCCAGAATCCT +
Preference number: 6 (lower is better)
Translates to: VQGVLIDIQVHG*VGSGTKVFQNP
Trigger: AGGATTCTGGAAGACTTTTGTACCACTGCCTACCAAACCATGAACTTGGATATCGATAAGTACTCCCTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 72 bp CACTGGAACCTCACTGTCAAGTTCTTTGTGACTGGATaGTTCTGTATGTACCATATCTTCCTTGAGTACCTC +
Preference number: 6 (lower is better)
Translates to: HWNLTVKFFVTG*FCMYHIFLEYL
Trigger: GAGGTACTCAAGGAAGATATGGTACATACAGAATCATCCAGTCACAAAGAACTTGACAGTGAGGTTCCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CAA 72 bp AGCAAAACTCCTCTCACATTGATGAGCTGGAGAGACTaGGGATCTGGATTCAAAGAGGAATTTCCCATCAAA +
Preference number: 6 (lower is better)
Translates to: SKTPLTLMSWRD*GSGFKEEFPIK
Trigger: TTTGATGGGAAATTCCTCTTTGAATCCAGATCCCAAGTCTCTCCAGCTCATCAATGTGAGAGGAGTTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000069936.8
CDS CAA 72 bp ATGTGTCTCTGGACAATTTCCCTAAGGAAGAAGTTCTaGTCCAAACTGTATCTGATTCTGGCAACATGGTCC +
Preference number: 6 (lower is better)
Translates to: MCLWTISLRKKF*SKLYLILATWS
Trigger: GGACCATGTTGCCAGAATCAGATACAGTTTGGACAAGAACTTCTTCCTTAGGGAAATTGTCCAGAGACACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CAA 72 bp AATCACCTCTTCACTAGCAGAGCTATAGAAGGGATGTaGGCTATAGGATTTCTCATACAGTTCACATCCAGC +
Preference number: 6 (lower is better)
Translates to: NHLFTSRAIEGM*AIGFLIQFTSS
Trigger: GCTGGATGTGAACTGTATGAGAAATCCTATAGCCAACATCCCTTCTATAGCTCTGCTAGTGAAGAGGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 72 bp ACTTATCGATATCCAAGTTCATGGTTTGGTAGGCAGTaGTACAAAAGTCTTCCAGAATCCTATACATGGCCT +
Preference number: 6 (lower is better)
Translates to: TYRYPSSWFGRQ*YKSLPESYTWP
Trigger: AGGCCATGTATAGGATTCTGGAAGACTTTTGTACCACTGCCTACCAAACCATGAACTTGGATATCGATAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CAA 90 bp TGGAATCTACTCTGCCATCTATATGTAATTTTTCTCTACCCTCAGTaGGTAATAGTGCATCCTGTTCTTCAGACCATGACTTTGACAGTG +
Preference number: 6 (lower is better)
Translates to: WNLLCHLYVIFLYPQ*VIVHPVLQTMTLTV
Trigger: CACTGTCAAAGTCATGGTCTGAAGAACAGGATGCACTATTACCAACTGAGGGTAGAGAAAAATTACATATAGATGGCAGAGTAGATTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS TCA 72 bp TCTTCCATAGGTGGTACTGTTTCTTTTGGCACAGGTTaGATTAATGGGCTTGAAGGCAATCCATCAATAGAA +
Preference number: 6 (lower is better)
Translates to: SSIGGTVSFGTG*INGLEGNPSIE
Trigger: TTCTATTGATGGATTGCCTTCAAGCCCATTAATTCAACCTGTGCCAAAAGAAACAGTACCACCTATGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS CCA 72 bp GCGGACTCTACAAAGATGGGTATAGTAGATCTAACATaGGATTCTTCCTCTATAAAATGTATGGGCCTATCT +
Preference number: 6 (lower is better)
Translates to: ADSTKMGIVDLT*DSSSIKCMGLS
Trigger: AGATAGGCCCATACATTTTATAGAGGAAGAATCCCATGTTAGATCTACTATACCCATCTTTGTAGAGTCCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8
CDS GCA 72 bp GTTGTTCTTCAGTTAGCTCGGACTGATAATAATCTGTaGCTACCTGATCTAGTTCTAATGAAATATCCTGGA +
Preference number: 6 (lower is better)
Translates to: VVLQLARTDNNL*LPDLVLMKYPG
Trigger: TCCAGGATATTTCATTAGAACTAGATCAGGTAGGCACAGATTATTATCAGTCCGAGCTAACTGAAGAACAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000069936.8
ENSMUST00000160116.8