Pregenerated sensors for IMPG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032343Ensembl transcript IDs: ENSMUST00000085289.12, ENSMUST00000113250.10, ENSMUST00000185068.2
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTGGAAGAACAACAACTGTTCTCAAAGTTGATTACATaGCTGTATTCCAATGACCAC | + |
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Preference number: 2 (lower is better) Translates to: PCGFWELNLGPLEEQQLFSKLIT*LYSNDH Trigger: GTGGTCATTGGAATACAGGCATGTAATCAACTTTGA...GAACAGTTGTTGTTCTTCCAGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| 3UTR-3UTR GCA 90 bp | TGGAGCATACATATACTCATCACAGTTCTTGGTACTACATTCATACATAAGAGACTGCCCAAATGCATATaGACCACATGGCTGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: WSIHILITVLGTTFIHKRLPKCI*TTWLPG Trigger: ACCAGGCAGCCATGTGGTGCATATGCATTTGGGCAG...TCTCTTATGTATGAATGTAGTACCAAGAACTGTGATGAGTATATGTATGCTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCATACATATACTCATCACAGTTCTTGGTACTACATTCATACATAAGAGAGCTGAGTCTCAAAGTTaGTTACATGCCTGTATTCCA | + |
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Preference number: 2 (lower is better) Translates to: WSIHILITVLGTTFIHKRAESQS*LHACIP Trigger: TGGAATACAGGCATGTAATCAACTTTGAGACTCAGC...TCTCTTATGTATGAATGTAGTACCAAGAACTGTGATGAGTATATGTATGCTCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| 3UTR-3UTR TCA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGGCTGAGTCTCAAAGTTaGTTACATGCCTGTATTCCA | + |
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Preference number: 2 (lower is better) Translates to: LLLEYCPKIVKCVPMIALAESQS*LHACIP Trigger: TGGAATACAGGCATGTAATCAACTTTGAGACTCAGC...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| 3UTR-3UTR CAA 90 bp | CTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTGGAAGAACAACAACTGCAGTCAATGTGGCTGTaGGGACGTAAACCCAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: LPCGFWELNLGPLEEQQLQSMWL*GRKPRA Trigger: AGCCCTGGGTTTACGTCCCAACAGCCACATTGACTG...CAGTTGTTGTTCTTCCAGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| 3UTR CCA 72 bp | GAGCCTGACTTACAGGTGTGTGTGAGCCAGTCAATGTaGCTGTTGGGACGTAAACCCAGGGCTTCTGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: EPDLQVCVSQSM*LLGRKPRASGR Trigger: TCTTCCAGAAGCCCTGGGTTTACGTCCCAACAGCCACATTGACTGGCTCACACACACCTGTAAGTCAGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| 3UTR TCA 72 bp | ACAAAGGCCAGAGGAGGGTGTTTGTTCTCTGGAGCCTaGCTTACAGGTGTGTGTGAGCCAGTCAATGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: TKARGGCLFSGA*LTGVCEPVNVA Trigger: AGCCACATTGACTGGCTCACACACACCTGTAAGTCAGGCTCCAGAGAACAAACACCCTCCTCTGGCCTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| 3UTR CCA 72 bp | ATAGCGTGGGTGTGTCTGTTTGCGGTTATGTGCACGTaGGTACAAAGGCCAGAGGAGGGTGTTTGTTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: IAWVCLFAVMCT*VQRPEEGVCSL Trigger: CAGAGAACAAACACCCTCCTCTGGCCTTTGTACCCACGTGCACATAACCGCAAACAGACACACCCACGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| 3UTR CCA 72 bp | GCCCAAATGCATATGCACCACATGGCTGCCTGGTACTaGCAGTATCAGTTAGAAGAGGGTGCTGGATCCACT | + |
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Preference number: 3 (lower is better) Translates to: AQMHMHHMAAWY*QYQLEEGAGST Trigger: AGTGGATCCAGCACCCTCTTCTAACTGATACTGCCAGTACCAGGCAGCCATGTGGTGCATATGCATTTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| 3UTR-3UTR CAA 90 bp | AATAGTTGGGAGACTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTGGATACACGCCTGTGCTCTaGTTCAAGCATGCTGAGTCT | + |
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Preference number: 3 (lower is better) Translates to: NSWETALWVLGTEPGSSGYTPVL*FKHAES Trigger: AGACTCAGCATGCTTGAACAAGAGCACAGGCGTGTA...TCCAGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAGTCTCCCAACTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| 3UTR TCA 72 bp | GTGTTTGTTCTCTGGAGCCTGACTTACAGGTGTGTGTaGGCCAGTCAATGTGGCTGTTGGGACGTAAACCCA | + |
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Preference number: 3 (lower is better) Translates to: VFVLWSLTYRCV*ASQCGCWDVNP Trigger: TGGGTTTACGTCCCAACAGCCACATTGACTGGCTCACACACACCTGTAAGTCAGGCTCCAGAGAACAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| 3UTR-3UTR CAA 90 bp | ATGAATAGTTGGGAGACTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTAAGCTAACCTTATCTTaGCTACTTGAGTACTGTCCA | + |
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Preference number: 3 (lower is better) Translates to: MNSWETALWVLGTEPGSSKLTLS*LLEYCP Trigger: TGGACAGTACTCAAGTAGCAAAGATAAGGTTAGCTT...AGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAGTCTCCCAACTATTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| 3UTR-3UTR CAA 90 bp | AAAAATAGCGTGGGTGTGTCTGTTTGCGGTTATGTGCACGTGGGTACAAAGGCCATCAGATCCTCAATATaGTACAACCCACTAAACAAG | + |
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Preference number: 3 (lower is better) Translates to: KNSVGVSVCGYVHVGTKAIRSSI*YNPLNK Trigger: CTTGTTTAGTGGGTTGTACAATATTGAGGATCTGAT...GGCCTTTGTACCCACGTGCACATAACCGCAAACAGACACACCCACGCTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| 3UTR TCA 72 bp | TGGCAGTATCAGTTAGAAGAGGGTGCTGGATCCACTTaGACTAGAATTATGAATAGTTGGGAGACTGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: WQYQLEEGAGST*TRIMNSWETAL Trigger: CAAGGCAGTCTCCCAACTATTCATAATTCTAGTTCAAGTGGATCCAGCACCCTCTTCTAACTGATACTGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| 3UTR TCA 72 bp | TCAAAGTTGATTACATGCCTGTATTCCAATGACCACTaGATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAA | + |
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Preference number: 3 (lower is better) Translates to: SKLITCLYSNDH*ISPSVFQKLTE Trigger: TTCTGTTAACTTCTGAAAAACAGAGGGAGAGATTCAGTGGTCATTGGAATACAGGCATGTAATCAACTTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR CCA 90 bp | ATGAATAGTTGGGAGACTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTGCTCCTGGCCCTTGGTaGCAATGGTCTCGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: MNSWETALWVLGTEPGSSAPGPW*QWSRSW Trigger: CCAGCTCCGAGACCATTGCCACCAAGGGCCAGGAGC...AGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAGTCTCCCAACTATTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR CCA 90 bp | CTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTGGAAGAACAACAACTGGCCCTTGAGCTGCGGTaGACCGAAGATCCTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: LPCGFWELNLGPLEEQQLALELR*TEDPPR Trigger: TCTTGGAGGATCTTCGGTCCACCGCAGCTCAAGGGC...CAGTTGTTGTTCTTCCAGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR CCA 90 bp | AATAGTTGGGAGACTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTGGAGCCCCAGGGACATCCTaGAAACATCTGTGGGTACCA | + |
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Preference number: 4 (lower is better) Translates to: NSWETALWVLGTEPGSSGAPGTS*KHLWVP Trigger: TGGTACCCACAGATGTTTCCAGGATGTCCCTGGGGC...TCCAGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAGTCTCCCAACTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR CCA 90 bp | TACAAAGGCCAGAGGAGGGTGTTTGTTCTCTGGAGCCTGACTTACAGGTGTGTGGGGGATGAGTGCTGTTaGGCCAGTGGTCATCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: YKGQRRVFVLWSLTYRCVGDECC*ASGHQG Trigger: CCCTTGATGACCACTGGCCCAACAGCACTCATCCCC...CACACACCTGTAAGTCAGGCTCCAGAGAACAAACACCCTCCTCTGGCCTTTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR TCA 90 bp | TACAAAGGCCAGAGGAGGGTGTTTGTTCTCTGGAGCCTGACTTACAGGTGTGTGAAGTGGCATCCTCTGTaGCATCAGCAAGGGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: YKGQRRVFVLWSLTYRCVKWHPL*HQQGAW Trigger: CCAAGCCCCTTGCTGATGTCACAGAGGATGCCACTT...CACACACCTGTAAGTCAGGCTCCAGAGAACAAACACCCTCCTCTGGCCTTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR TCA 90 bp | AATAGTTGGGAGACTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTGGAGAACCAGCAGGTCTGTaGATCGTTGTTCCAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: NSWETALWVLGTEPGSSGEPAGL*IVVPGL Trigger: AAGCCCTGGAACAACGATTCACAGACCTGCTGGTTC...TCCAGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAGTCTCCCAACTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| 3UTR CAA 72 bp | GACTTACAGGTGTGTGTGAGCCAGTCAATGTGGCTGTaGGGACGTAAACCCAGGGCTTCTGGAAGAGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: DLQVCVSQSMWL*GRKPRASGRAV Trigger: TACTGCTCTTCCAGAAGCCCTGGGTTTACGTCCCAACAGCCACATTGACTGGCTCACACACACCTGTAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR TCA 90 bp | CTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTGGAAGAACAACAACTGTTGGCAGAGAGATGCTaGATTCCACCTTCTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LPCGFWELNLGPLEEQQLLAERC*IPPSPL Trigger: CAGAGGAGAAGGTGGAATTCAGCATCTCTCTGCCAA...CAGTTGTTGTTCTTCCAGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR CCA 90 bp | AATAGTTGGGAGACTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTGGACTTCCAGTGTCTCCATaGAGGCTGTCTCATCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: NSWETALWVLGTEPGSSGLPVSP*RLSHLS Trigger: GGAAAGATGAGACAGCCTCCATGGAGACACTGGAAG...TCCAGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAGTCTCCCAACTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR CCA 90 bp | AATAGTTGGGAGACTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTGGACTGTTGGGATGGGTGTaGTCATCTCCAAGAACTGAC | + |
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Preference number: 4 (lower is better) Translates to: NSWETALWVLGTEPGSSGLLGWV*SSPRTD Trigger: GTCAGTTCTTGGAGATGACCACACCCATCCCAACAG...TCCAGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAGTCTCCCAACTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR CCA 90 bp | CTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTGGAAGAACAACAACTGACCGTACTGTTGGGATaGGTGTGGTCATCTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: LPCGFWELNLGPLEEQQLTVLLG*VWSSPR Trigger: TCTTGGAGATGACCACACCCATCCCAACAGTACGGT...CAGTTGTTGTTCTTCCAGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR TCA 90 bp | TACAAAGGCCAGAGGAGGGTGTTTGTTCTCTGGAGCCTGACTTACAGGTGTGTGAGGCTGACCCAGTCTTaGTATTCCTCTGTGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: YKGQRRVFVLWSLTYRCVRLTQS*YSSVSG Trigger: TCCTGACACAGAGGAATATCAAGACTGGGTCAGCCT...CACACACCTGTAAGTCAGGCTCCAGAGAACAAACACCCTCCTCTGGCCTTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR TCA 90 bp | TACAAAGGCCAGAGGAGGGTGTTTGTTCTCTGGAGCCTGACTTACAGGTGTGTGCTTTCTGGCAGAGGCTaGCCCAGTCTTGATATTCCT | + |
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Preference number: 4 (lower is better) Translates to: YKGQRRVFVLWSLTYRCVLSGRG*PSLDIP Trigger: AGGAATATCAAGACTGGGTCAGCCTCTGCCAGAAAG...CACACACCTGTAAGTCAGGCTCCAGAGAACAAACACCCTCCTCTGGCCTTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR TCA 90 bp | ATGAATAGTTGGGAGACTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTCGTTGTTCCAGGGCTTaGTACTCCAGAGAACTCTTG | + |
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Preference number: 4 (lower is better) Translates to: MNSWETALWVLGTEPGSSRCSRA*YSRELL Trigger: CAAGAGTTCTCTGGAGTATCAAGCCCTGGAACAACG...AGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAGTCTCCCAACTATTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR CCA 90 bp | TACAAAGGCCAGAGGAGGGTGTTTGTTCTCTGGAGCCTGACTTACAGGTGTGTGTCTGCCTTGAACCTGTaGTTTGGCAGAGAGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: YKGQRRVFVLWSLTYRCVSALNL*FGREML Trigger: CAGCATCTCTCTGCCAAACCACAGGTTCAAGGCAGA...CACACACCTGTAAGTCAGGCTCCAGAGAACAAACACCCTCCTCTGGCCTTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR CCA 90 bp | AAAAATAGCGTGGGTGTGTCTGTTTGCGGTTATGTGCACGTGGGTACAAAGGCCTCAGCTCTCTGTCACTaGAGGATGCAGGCCAATGTG | + |
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Preference number: 4 (lower is better) Translates to: KNSVGVSVCGYVHVGTKASALCH*RMQANV Trigger: CACATTGGCCTGCATCCTCCAGTGACAGAGAGCTGA...GGCCTTTGTACCCACGTGCACATAACCGCAAACAGACACACCCACGCTATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR CCA 90 bp | CTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTGGAAGAACAACAACTGAGATCTAGGTGCTCCTaGGAGTTGCTGAAGTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: LPCGFWELNLGPLEEQQLRSRCS*ELLKFF Trigger: GAAAAACTTCAGCAACTCCCAGGAGCACCTAGATCT...CAGTTGTTGTTCTTCCAGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR CCA 90 bp | ATGAATAGTTGGGAGACTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTACCAAGAACTGTCTTTaGAGGACATTCCAGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: MNSWETALWVLGTEPGSSTKNCL*RTFQAA Trigger: AGCTGCCTGGAATGTCCTCCAAAGACAGTTCTTGGT...AGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAGTCTCCCAACTATTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR TCA 90 bp | AAAAATAGCGTGGGTGTGTCTGTTTGCGGTTATGTGCACGTGGGTACAAAGGCCCCAGAGAACTCTTGTTaGACAGGTCATAGGAGAACG | + |
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Preference number: 4 (lower is better) Translates to: KNSVGVSVCGYVHVGTKAPENSC*TGHRRT Trigger: CGTTCTCCTATGACCTGTTCAACAAGAGTTCTCTGG...GGCCTTTGTACCCACGTGCACATAACCGCAAACAGACACACCCACGCTATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR CCA 90 bp | CTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTGGAAGAACAACAACTGTTTCCCTCCCAGTCCTaGTCTTCAAATTCTTCAAAT | + |
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Preference number: 4 (lower is better) Translates to: LPCGFWELNLGPLEEQQLFPSQS*SSNSSN Trigger: ATTTGAAGAATTTGAAGACCAGGACTGGGAGGGAAA...CAGTTGTTGTTCTTCCAGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR CCA 90 bp | CTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTGGAAGAACAACAACTGAACTTCATCACCGAATaGAATTTTCCCTTCTACCAA | + |
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Preference number: 4 (lower is better) Translates to: LPCGFWELNLGPLEEQQLNFITE*NFPFYQ Trigger: TTGGTAGAAGGGAAAATTCCATTCGGTGATGAAGTT...CAGTTGTTGTTCTTCCAGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR CCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGAGCTCCTGGCCCTTGGTaGCAATGGTCTCGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRAPGPW*QWSRSW Trigger: CCAGCTCCGAGACCATTGCCACCAAGGGCCAGGAGC...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR TCA 90 bp | ATGAATAGTTGGGAGACTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTCTTCTTGACATACTTTaGTTCCTTGAACTTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: MNSWETALWVLGTEPGSSLLDIL*FLELGE Trigger: TTCTCCAAGTTCAAGGAATCAAAGTATGTCAAGAAG...AGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAGTCTCCCAACTATTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR GCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGATGGCCTGCATGGAGTTaGTTGTTCTCGGCCGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRWPAWS*LFSAGH Trigger: GTGGCCGGCCGAGAACAAGCAACTCCATGCAGGCCA...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR CCA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGGGGGATGAGTGCTGTTaGGCCAGTGGTCATCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LLLEYCPKIVKCVPMIALGDECC*ASGHQG Trigger: CCCTTGATGACCACTGGCCCAACAGCACTCATCCCC...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR CCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGAGCCCTTGAGCTGCGGTaGACCGAAGATCCTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRALELR*TEDPPR Trigger: TCTTGGAGGATCTTCGGTCCACCGCAGCTCAAGGGC...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR TCA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGAAGTGGCATCCTCTGTaGCATCAGCAAGGGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LLLEYCPKIVKCVPMIALKWHPL*HQQGAW Trigger: CCAAGCCCCTTGCTGATGTCACAGAGGATGCCACTT...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR GCA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGATTGAGCCCTTGAGCTaGGGTGGACCGAAGATCCTC | + |
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Preference number: 4 (lower is better) Translates to: LLLEYCPKIVKCVPMIALIEPLS*GGPKIL Trigger: GAGGATCTTCGGTCCACCGCAGCTCAAGGGCTCAAT...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR GCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGAATTGAGCCCTTGAGCTaGGGTGGACCGAAGATCCTC | + |
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Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRIEPLS*GGPKIL Trigger: GAGGATCTTCGGTCCACCGCAGCTCAAGGGCTCAAT...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR CCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGAGCCCCAGGGACATCCTaGAAACATCTGTGGGTACCA | + |
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Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRAPGTS*KHLWVP Trigger: TGGTACCCACAGATGTTTCCAGGATGTCCCTGGGGC...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR CCA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGGTCATCAGAAGGAAGTaGGAAGGGCCCCAGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLEYCPKIVKCVPMIALVIRRK*EGPQGH Trigger: ATGTCCCTGGGGCCCTTCCCACTTCCTTCTGATGAC...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGAGTCATCAGAAGGAAGTaGGAAGGGCCCCAGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRVIRRK*EGPQGH Trigger: ATGTCCCTGGGGCCCTTCCCACTTCCTTCTGATGAC...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR TCA 90 bp | TGGAGCATACATATACTCATCACAGTTCTTGGTACTACATTCATACATAAGAGATGTCATGGCTGCTTGTaGTCAGCTCTCTGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: WSIHILITVLGTTFIHKRCHGCL*SALCHW Trigger: CCAGTGACAGAGAGCTGATCACAAGCAGCCATGACA...TCTCTTATGTATGAATGTAGTACCAAGAACTGTGATGAGTATATGTATGCTCCA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
||
| CDS-3UTR TCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGATGTCATGGCTGCTTGTaGTCAGCTCTCTGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRCHGCL*SALCHW Trigger: CCAGTGACAGAGAGCTGATCACAAGCAGCCATGACA...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR TCA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGGAACCAGCAGGTCTGTaGATCGTTGTTCCAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLEYCPKIVKCVPMIALEPAGL*IVVPGL Trigger: AAGCCCTGGAACAACGATTCACAGACCTGCTGGTTC...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR GCA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGAGGGGCTTCAGTAGGTaGTTCCAGTGTCTCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLEYCPKIVKCVPMIALRGFSR*FQCLHG Trigger: TCCATGGAGACACTGGAAGCACCTACTGAAGCCCCT...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR GCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGAAGGGGCTTCAGTAGGTaGTTCCAGTGTCTCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRRGFSR*FQCLHG Trigger: TCCATGGAGACACTGGAAGCACCTACTGAAGCCCCT...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGATCAGCTCTCTGTCACTaGAGGATGCAGGCCAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRSALCH*RMQANV Trigger: CACATTGGCCTGCATCCTCCAGTGACAGAGAGCTGA...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGAAGGCTGACCCAGTCTTaGTATTCCTCTGTGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRRLTQS*YSSVSG Trigger: TCCTGACACAGAGGAATATCAAGACTGGGTCAGCCT...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGACTTTCTGGCAGAGGCTaGCCCAGTCTTGATATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRLSGRG*PSLDIP Trigger: AGGAATATCAAGACTGGGTCAGCCTCTGCCAGAAAG...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGATTGGCAGAGAGATGCTaGATTCCACCTTCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRLAERC*IPPSPL Trigger: CAGAGGAGAAGGTGGAATTCAGCATCTCTCTGCCAA...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGACGTTGTTCCAGGGCTTaGTACTCCAGAGAACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRRCSRA*YSRELL Trigger: CAAGAGTTCTCTGGAGTATCAAGCCCTGGAACAACG...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGACAGAAGGTTTCTTTCTaGCAGAGGCTGACCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRQKVSF*QRLTQS Trigger: AGACTGGGTCAGCCTCTGCCAGAAAGAAACCTTCTG...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR CCA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGCAGAAGGTTTCTTTCTaGCAGAGGCTGACCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLEYCPKIVKCVPMIALQKVSF*QRLTQS Trigger: AGACTGGGTCAGCCTCTGCCAGAAAGAAACCTTCTG...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR CCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGATCTGCCTTGAACCTGTaGTTTGGCAGAGAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRSALNL*FGREML Trigger: CAGCATCTCTCTGCCAAACCACAGGTTCAAGGCAGA...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR CCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGATTTTGCAACTGCAGTTaGGACTGTCCCACCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRFCNCS*DCPTSS Trigger: GGAACTGGTGGGACAGTCCCAACTGCAGTTGCAAAA...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR CCA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGTTTTGCAACTGCAGTTaGGACTGTCCCACCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLEYCPKIVKCVPMIALFCNCS*DCPTSS Trigger: GGAACTGGTGGGACAGTCCCAACTGCAGTTGCAAAA...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGACTGTTGGGATGGGTGTaGTCATCTCCAAGAACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRLLGWV*SSPRTD Trigger: GTCAGTTCTTGGAGATGACCACACCCATCCCAACAG...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR CCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGAACCGTACTGTTGGGATaGGTGTGGTCATCTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRTVLLG*VWSSPR Trigger: TCTTGGAGATGACCACACCCATCCCAACAGTACGGT...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR CCA 90 bp | TGGAGCATACATATACTCATCACAGTTCTTGGTACTACATTCATACATAAGAGAGTTTGTAGAGTGATCTaGTGGCCTGCATGGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WSIHILITVLGTTFIHKRVCRVI*WPAWSC Trigger: GCAACTCCATGCAGGCCACCAGATCACTCTACAAAC...TCTCTTATGTATGAATGTAGTACCAAGAACTGTGATGAGTATATGTATGCTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
||
| CDS-3UTR CCA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGGTTTGTAGAGTGATCTaGTGGCCTGCATGGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLEYCPKIVKCVPMIALVCRVI*WPAWSC Trigger: GCAACTCCATGCAGGCCACCAGATCACTCTACAAAC...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR TCA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGTCTGTTGTGGGCTTTTaGATGTCCTTGAGGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLLEYCPKIVKCVPMIALSVVGF*MSLRVT Trigger: TGTCACCCTCAAGGACATTCAAAAGCCCACAACAGA...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR TCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGATCTGTTGTGGGCTTTTaGATGTCCTTGAGGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRSVVGF*MSLRVT Trigger: TGTCACCCTCAAGGACATTCAAAAGCCCACAACAGA...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR TCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGACCAGAGAACTCTTGTTaGACAGGTCATAGGAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRPENSC*TGHRRT Trigger: CGTTCTCCTATGACCTGTTCAACAAGAGTTCTCTGG...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR GCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGATGTCAGACACATCCATaGCATCTAGGTCTCGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRCQTHP*HLGLGL Trigger: CAATCCGAGACCTAGATGGCATGGATGTGTCTGACA...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR CCA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGACCAAGAACTGTCTTTaGAGGACATTCCAGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLEYCPKIVKCVPMIALTKNCL*RTFQAA Trigger: AGCTGCCTGGAATGTCCTCCAAAGACAGTTCTTGGT...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR TCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGAAGCTGGGAAAAGTGCTaGTCTTTTGGTTCGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRSWEKC*SFGSKL Trigger: AAGCTTCGAACCAAAAGATCAGCACTTTTCCCAGCT...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
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| CDS-3UTR CCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGAAGATCTAGGTGCTCCTaGGAGTTGCTGAAGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRRSRCS*ELLKFF Trigger: GAAAAACTTCAGCAACTCCCAGGAGCACCTAGATCT...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR CCA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGCTTGAACCTGTGGTTTaGCAGAGAGATGCTGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLEYCPKIVKCVPMIALLEPVV*QRDAEF Trigger: GAATTCAGCATCTCTCTGCCAAACCACAGGTTCAAG...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR CCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGACTTGAACCTGTGGTTTaGCAGAGAGATGCTGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRLEPVV*QRDAEF Trigger: GAATTCAGCATCTCTCTGCCAAACCACAGGTTCAAG...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR CCA 90 bp | TGGAGCATACATATACTCATCACAGTTCTTGGTACTACATTCATACATAAGAGAAACGAAAGGAAGTTCTaGACTCAAAGTGGCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WSIHILITVLGTTFIHKRNERKF*TQSGIL Trigger: GAGGATGCCACTTTGAGTCCAGAACTTCCTTTCGTT...TCTCTTATGTATGAATGTAGTACCAAGAACTGTGATGAGTATATGTATGCTCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
||
| CDS-3UTR CCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGAAACGAAAGGAAGTTCTaGACTCAAAGTGGCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRNERKF*TQSGIL Trigger: GAGGATGCCACTTTGAGTCCAGAACTTCCTTTCGTT...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR GCA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGAGGGCTTTTTGCTTCTaGATGGTCCCTCTTAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLEYCPKIVKCVPMIALRAFCF*MVPLKD Trigger: ATCTTTAAGAGGGACCATGCAGAAGCAAAAAGCCCT...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR CCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGATTTCCCTCCCAGTCCTaGTCTTCAAATTCTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRFPSQS*SSNSSN Trigger: ATTTGAAGAATTTGAAGACCAGGACTGGGAGGGAAA...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR CCA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGCGAATATTCGTTTCATaGTTGACACTTTGTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLEYCPKIVKCVPMIALRIFVS*LTLCAL Trigger: CAGTGCACAAAGTGTCAACCATGAAACGAATATTCG...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGACACTTTGTGCACTGTTaGAGTACTTTCAATTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRHFVHC*STFNCF Trigger: GAAACAATTGAAAGTACTTCAACAGTGCACAAAGTG...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
||
| CDS-3UTR GCA 90 bp | TGGAGCATACATATACTCATCACAGTTCTTGGTACTACATTCATACATAAGAGACTGAGTATTTCCAGTTaGTTAAATCCCGTAAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: WSIHILITVLGTTFIHKRLSISS*LNPVRF Trigger: GAATCTTACGGGATTTAAGCAACTGGAAATACTCAG...TCTCTTATGTATGAATGTAGTACCAAGAACTGTGATGAGTATATGTATGCTCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
||
| CDS-3UTR GCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGACTGAGTATTTCCAGTTaGTTAAATCCCGTAAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRLSISS*LNPVRF Trigger: GAATCTTACGGGATTTAAGCAACTGGAAATACTCAG...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR GCA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGATGGTTGACACTTTGTaGACTGTTGAAGTACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLEYCPKIVKCVPMIALMVDTL*TVEVLS Trigger: TGAAAGTACTTCAACAGTGCACAAAGTGTCAACCAT...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGAAACTTCATCACCGAATaGAATTTTCCCTTCTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRNFITE*NFPFYQ Trigger: TTGGTAGAAGGGAAAATTCCATTCGGTGATGAAGTT...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR GCA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGTTCTTAAATATCTTTTaGAACTGCAGTTGGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLEYCPKIVKCVPMIALFLNIF*NCSWDC Trigger: ACAGTCCCAACTGCAGTTGCAAAAGATATTTAAGAA...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGATTTGGTTCGAAGCTTTaGCAAATCGAATATTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRFGSKL*QIEYSF Trigger: AAACGAATATTCGATTTGCCAAAGCTTCGAACCAAA...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
||
| CDS TCA 90 bp | CTGCGGTGGACCGAAGATCCTCCAAGACCCCGCGCACGGCCTGGGTaGGGTTGTAGGGTACCGCCTTTGCAAACCGCACTTTGCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LRWTEDPPRPRARPG*GCRVPPLQTALCCS Trigger: TGAACAGCAAAGTGCGGTTTGCAAAGGCGGTACCCTACAACCTCACCCAGGCCGTGCGCGGGGTCTTGGAGGATCTTCGGTCCACCGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS GCA 90 bp | AATGTCGAGGGAGTAGCTTTCGATTTCCAGATTGAGCCCTTGAGCTaGGGTGGACCGAAGATCCTCCAAGACCCCGCGCACGGCCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: NVEGVAFDFQIEPLS*GGPKILQDPAHGLG Trigger: ACCCAGGCCGTGCGCGGGGTCTTGGAGGATCTTCGGTCCACCGCAGCTCAAGGGCTCAATCTGGAAATCGAAAGCTACTCCCTCGACATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS GCA 90 bp | CAAGACCCCGCGCACGGCCTGGGTGAGGTTGTAGGGTACCGCCTTTaGAAACCGCACTTTGCTGTTCACGATCACACTTCCGTTTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QDPAHGLGEVVGYRL*KPHFAVHDHTSVSE Trigger: TTCAGAAACGGAAGTGTGATCGTGAACAGCAAAGTGCGGTTTGCAAAGGCGGTACCCTACAACCTCACCCAGGCCGTGCGCGGGGTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS TCA 90 bp | GATCAGCTGGTTCAATGTCGAGGGAGTAGCTTTCGATTTCCAGATTaGGCCCTTGAGCTGCGGTGGACCGAAGATCCTCCAAGACCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: DQLVQCRGSSFRFPD*ALELRWTEDPPRPR Trigger: GCGGGGTCTTGGAGGATCTTCGGTCCACCGCAGCTCAAGGGCTCAATCTGGAAATCGAAAGCTACTCCCTCGACATTGAACCAGCTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS GCA 90 bp | GGACATCCTGGAAACATCTGTGGGTACCACAGGGGCTTCAGTAGGTaGTTCCAGTGTCTCCATGGAGGCTGTCTCATCTTTCCTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GHPGNICGYHRGFSR*FQCLHGGCLIFPPR Trigger: CCTGGGAGGAAAGATGAGACAGCCTCCATGGAGACACTGGAAGCACCTACTGAAGCCCCTGTGGTACCCACAGATGTTTCCAGGATGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 ENSMUST00000185068.2 |
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| CDS GCA 90 bp | GTCCAGGGTCCCGTGGCTCTCATGTCCCTGTCTGCAGCGACACTCTaGTTCCTCTGTCCACTCATTCTTTACACACTGGGCAAATTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VQGPVALMSLSAATL*FLCPLILYTLGKFA Trigger: GGCAAATTTGCCCAGTGTGTAAAGAATGAGTGGACAGAGGAAGCAGAGTGTCGCTGCAGACAGGGACATGAGAGCCACGGGACCCTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS TCA 90 bp | TTGCAACTGCAGTTGGGACTGTCCCACCAGTTCCTGGTAGTATGGTaGCCCAGAGTTGGTGAGCTCTGCCTTGAACCTGTGGTTTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LQLQLGLSHQFLVVW*PRVGELCLEPVVWQ Trigger: CTGCCAAACCACAGGTTCAAGGCAGAGCTCACCAACTCTGGGTCACCATACTACCAGGAACTGGTGGGACAGTCCCAACTGCAGTTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 ENSMUST00000185068.2 |
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| CDS CCA 90 bp | GGTGACACTGAGAATCTCCTTGAGGTCTGTGTCATCAGAAGGAAGTaGGAAGGGCCCCAGGGACATCCTGGAAACATCTGTGGGTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: GDTENLLEVCVIRRK*EGPQGHPGNICGYH Trigger: GTGGTACCCACAGATGTTTCCAGGATGTCCCTGGGGCCCTTCCCACTTCCTTCTGATGACACAGACCTCAAGGAGATTCTCAGTGTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 ENSMUST00000185068.2 |
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| CDS CCA 90 bp | TTCTCTGTCCACTGCCTCAAGCCTAGGCTCAACGAAAGGAAGTTCTaGACTCAAAGTGGCATCCTCTGTGACATCAGCAAGGGGCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FSVHCLKPRLNERKF*TQSGILCDISKGLG Trigger: CCCAAGCCCCTTGCTGATGTCACAGAGGATGCCACTTTGAGTCCAGAACTTCCTTTCGTTGAGCCTAGGCTTGAGGCAGTGGACAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR CAA 90 bp | CCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTGGAAGAACAACAACTGTTCTATGGTGACCCAGAGTaGGTGAGCTCTGCCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PCGFWELNLGPLEEQQLFYGDPE*VSSALN Trigger: GTTCAAGGCAGAGCTCACCAACTCTGGGTCACCATA...GAACAGTTGTTGTTCTTCCAGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR CAA 90 bp | AATAGTTGGGAGACTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTGGAGACTATCAGGGCTTTTaGCTTCTGCATGGTCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSWETALWVLGTEPGSSGDYQGF*LLHGPS Trigger: AGAGGGACCATGCAGAAGCAAAAAGCCCTGATAGTC...TCCAGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAGTCTCCCAACTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
||
| CDS GCA 90 bp | GTCTTTGGAGGACATTCCAGGCAGCTCAGATCCTTCTCTGTCCACTaGCTCAAGCCTAGGCTCAACGAAAGGAAGTTCTGGACTCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VFGGHSRQLRSFSVH*LKPRLNERKFWTQS Trigger: ACTTTGAGTCCAGAACTTCCTTTCGTTGAGCCTAGGCTTGAGGCAGTGGACAGAGAAGGATCTGAGCTGCCTGGAATGTCCTCCAAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS CCA 90 bp | ATCGGGAAATTGAGGCTGATACAGGTGGAGACCAAGAACTGTCTTTaGAGGACATTCCAGGCAGCTCAGATCCTTCTCTGTCCACTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: IGKLRLIQVETKNCL*RTFQAAQILLCPLP Trigger: AGGCAGTGGACAGAGAAGGATCTGAGCTGCCTGGAATGTCCTCCAAAGACAGTTCTTGGTCTCCACCTGTATCAGCCTCAATTTCCCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS CCA 90 bp | CTTTTTAACACCAGGTTCCTGAGCTTGGTTTGTAGAGTGATCTGGTaGCCTGCATGGAGTTGCTTGTTCTCGGCCGGCCACACAAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LFNTRFLSLVCRVIW*PAWSCLFSAGHTSL Trigger: AAGACTTGTGTGGCCGGCCGAGAACAAGCAACTCCATGCAGGCCACCAGATCACTCTACAAACCAAGCTCAGGAACCTGGTGTTAAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR CAA 90 bp | AAAAATAGCGTGGGTGTGTCTGTTTGCGGTTATGTGCACGTGGGTACAAAGGCCGAGGCTGACCCAGTCTaGATATTCCTCTGTGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KNSVGVSVCGYVHVGTKAEADPV*IFLCVR Trigger: CCTGACACAGAGGAATATCAAGACTGGGTCAGCCTC...GGCCTTTGTACCCACGTGCACATAACCGCAAACAGACACACCCACGCTATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
||
| CDS-3UTR CAA 90 bp | AAAAATAGCGTGGGTGTGTCTGTTTGCGGTTATGTGCACGTGGGTACAAAGGCCGACCAAGAACTGTCTTaGGAGGACATTCCAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KNSVGVSVCGYVHVGTKADQELS*EDIPGS Trigger: GCTGCCTGGAATGTCCTCCAAAGACAGTTCTTGGTC...GGCCTTTGTACCCACGTGCACATAACCGCAAACAGACACACCCACGCTATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS GCA 90 bp | ACTCATTCTTTACACACTGGGCAAATTTGCCACAGTCTAGGAGTTTaGAGGGATCCGCCTGATCAGCTGGTTCAATGTCGAGGGAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: THSLHTGQICHSLGV*RDPPDQLVQCRGSS Trigger: GCTACTCCCTCGACATTGAACCAGCTGATCAGGCGGATCCCTGCAAACTCCTAGACTGTGGCAAATTTGCCCAGTGTGTAAAGAATGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR CAA 90 bp | ATGAATAGTTGGGAGACTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTTTCTGTTGTGGGCTTTaGAATGTCCTTGAGGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: MNSWETALWVLGTEPGSSFCCGL*NVLEGD Trigger: GTCACCCTCAAGGACATTCAAAAGCCCACAACAGAA...AGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAGTCTCCCAACTATTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
||
| CDS-3UTR CAA 90 bp | CTGCCTTGTGGGTTCTGGGAACTGAACCTGGGTCCTCTGGAAGAACAACAACTGTGTATGATGAGTTTTTaGAGGTCTGTAGCTGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPCGFWELNLGPLEEQQLCMMSF*RSVAVR Trigger: CCTCACAGCTACAGACCTCAAAAAACTCATCATACA...CAGTTGTTGTTCTTCCAGAGGACCCAGGTTCAGTTCCCAGAACCCACAAGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS TCA 90 bp | TTTTCCCAATGTCAAAGAGGCAGAAGGTTTCTTTCTGGCAGAGGCTaGCCCAGTCTTGATATTCCTCTGTGTCAGGAATTCGGTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FSQCQRGRRFLSGRG*PSLDIPLCQEFGPE Trigger: TTCTGGACCGAATTCCTGACACAGAGGAATATCAAGACTGGGTCAGCCTCTGCCAGAAAGAAACCTTCTGCCTCTTTGACATTGGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 ENSMUST00000185068.2 |
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| CDS-3UTR CAA 90 bp | TACAAAGGCCAGAGGAGGGTGTTTGTTCTCTGGAGCCTGACTTACAGGTGTGTGGCTGAGTATTTCCAGTaGCTTAAATCCCGTAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: YKGQRRVFVLWSLTYRCVAEYFQ*LKSRKI Trigger: AATCTTACGGGATTTAAGCAACTGGAAATACTCAGC...CACACACCTGTAAGTCAGGCTCCAGAGAACAAACACCCTCCTCTGGCCTTTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
||
| CDS TCA 90 bp | TCAAAGAGGCAGAAGGTTTCTTTCTGGCAGAGGCTGACCCAGTCTTaGTATTCCTCTGTGTCAGGAATTCGGTCCAGAAAGATACGATAT | + |
|
Preference number: 5 (lower is better) Translates to: SKRQKVSFWQRLTQS*YSSVSGIRSRKIRY Trigger: ATATCGTATCTTTCTGGACCGAATTCCTGACACAGAGGAATATCAAGACTGGGTCAGCCTCTGCCAGAAAGAAACCTTCTGCCTCTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 ENSMUST00000185068.2 |
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| CDS-3UTR CAA 90 bp | TGGAGCATACATATACTCATCACAGTTCTTGGTACTACATTCATACATAAGAGAACTAGCTCCTGGCCCTaGGTGGCAATGGTCTCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WSIHILITVLGTTFIHKRTSSWP*VAMVSE Trigger: CTCCGAGACCATTGCCACCAAGGGCCAGGAGCTAGT...TCTCTTATGTATGAATGTAGTACCAAGAACTGTGATGAGTATATGTATGCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR CAA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGAACTAGCTCCTGGCCCTaGGTGGCAATGGTCTCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRTSSWP*VAMVSE Trigger: CTCCGAGACCATTGCCACCAAGGGCCAGGAGCTAGT...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS TCA 90 bp | GTTTTATTCTCTGCTGAAGAAGATCTAGGTGCTCCTGGGAGTTGCTaGAGTTTTTCCCAATGTCAAAGAGGCAGAAGGTTTCTTTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLFSAEEDLGAPGSC*SFSQCQRGRRFLSG Trigger: GCCAGAAAGAAACCTTCTGCCTCTTTGACATTGGGAAAAACTTCAGCAACTCCCAGGAGCACCTAGATCTTCTTCAGCAGAGAATAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 ENSMUST00000185068.2 |
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| CDS-3UTR CAA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGGAGGCTGACCCAGTCTaGATATTCCTCTGTGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLEYCPKIVKCVPMIALEADPV*IFLCVR Trigger: CCTGACACAGAGGAATATCAAGACTGGGTCAGCCTC...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR CAA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGATATGGTGACCCAGAGTaGGTGAGCTCTGCCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRYGDPE*VSSALN Trigger: GTTCAAGGCAGAGCTCACCAACTCTGGGTCACCATA...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR CAA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGAGACCAAGAACTGTCTTaGGAGGACATTCCAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRDQELS*EDIPGS Trigger: GCTGCCTGGAATGTCCTCCAAAGACAGTTCTTGGTC...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS GCA 90 bp | TTGATATTCCTCTGTGTCAGGAATTCGGTCCAGAAAGATACGATATaGTTCCCACACGACTTCTTGACATACTTTGATTCCTTGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LIFLCVRNSVQKDTI*FPHDFLTYFDSLNL Trigger: CAAGTTCAAGGAATCAAAGTATGTCAAGAAGTCGTGTGGGAAGCATATCGTATCTTTCTGGACCGAATTCCTGACACAGAGGAATATCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000185068.2 |
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| CDS-3UTR CAA 90 bp | TGGAGCATACATATACTCATCACAGTTCTTGGTACTACATTCATACATAAGAGAAGGTGCTCCTGGGAGTaGCTGAAGTTTTTCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: WSIHILITVLGTTFIHKRRCSWE*LKFFPM Trigger: CATTGGGAAAAACTTCAGCAACTCCCAGGAGCACCT...TCTCTTATGTATGAATGTAGTACCAAGAACTGTGATGAGTATATGTATGCTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR CAA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGAGGTGCTCCTGGGAGTaGCTGAAGTTTTTCCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LLLEYCPKIVKCVPMIALRCSWE*LKFFPM Trigger: CATTGGGAAAAACTTCAGCAACTCCCAGGAGCACCT...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS-3UTR CAA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGGACTATCAGGGCTTTTaGCTTCTGCATGGTCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLEYCPKIVKCVPMIALDYQGF*LLHGPS Trigger: AGAGGGACCATGCAGAAGCAAAAAGCCCTGATAGTC...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS GCA 90 bp | TTGATATTCCTCTGTGTCAGGAATTCGGTCCAGAAAGATACGATATaGTTCCCACACGACTTCTTGACATACTCTCAGTCTATAATATTC | + |
|
Preference number: 5 (lower is better) Translates to: LIFLCVRNSVQKDTI*FPHDFLTYSQSIIF Trigger: GAATATTATAGACTGAGAGTATGTCAAGAAGTCGTGTGGGAAGCATATCGTATCTTTCTGGACCGAATTCCTGACACAGAGGAATATCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
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| CDS-3UTR CAA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGTTCTGTTGTGGGCTTTaGAATGTCCTTGAGGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLLEYCPKIVKCVPMIALFCCGL*NVLEGD Trigger: GTCACCCTCAAGGACATTCAAAAGCCCACAACAGAA...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR CAA 90 bp | TGGAGCATACATATACTCATCACAGTTCTTGGTACTACATTCATACATAAGAGATCGTTGTTCCAGGGCTaGATACTCCAGAGAACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WSIHILITVLGTTFIHKRSLFQG*ILQRTL Trigger: AAGAGTTCTCTGGAGTATCAAGCCCTGGAACAACGA...TCTCTTATGTATGAATGTAGTACCAAGAACTGTGATGAGTATATGTATGCTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
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| CDS-3UTR CAA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGATCGTTGTTCCAGGGCTaGATACTCCAGAGAACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRSLFQG*ILQRTL Trigger: AAGAGTTCTCTGGAGTATCAAGCCCTGGAACAACGA...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS TCA 90 bp | TGGATTCTTTCACTTTCAATTTTGTTGGAATCAAGAGACAGTAGATaGCTATCAGGGCTTTTTGCTTCTGCATGGTCCCTCTTAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: WILSLSILLESRDSR*LSGLFASAWSLLKM Trigger: CATCTTTAAGAGGGACCATGCAGAAGCAAAAAGCCCTGATAGTCATCTACTGTCTCTTGATTCCAACAAAATTGAAAGTGAAAGAATCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS GCA 90 bp | CGAAGCTTTGGCAAATCGAATATTCGTTTCATGGTTGACACTTTGTaGACTGTTGAAGTACTTTCAATTGTTTCGATTCTTGGGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSFGKSNIRFMVDTL*TVEVLSIVSILGVL Trigger: CAAAACCCCAAGAATCGAAACAATTGAAAGTACTTCAACAGTGCACAAAGTGTCAACCATGAAACGAATATTCGATTTGCCAAAGCTTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
||
| CDS CCA 90 bp | CTGATCTTTTGGTTCGAAGCTTTGGCAAATCGAATATTCGTTTCATaGTTGACACTTTGTGCACTGTTGAAGTACTTTCAATTGTTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LIFWFEALANRIFVS*LTLCALLKYFQLFR Trigger: TCGAAACAATTGAAAGTACTTCAACAGTGCACAAAGTGTCAACCATGAAACGAATATTCGATTTGCCAAAGCTTCGAACCAAAAGATCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
||
| CDS-3UTR CAA 90 bp | TGGAGCATACATATACTCATCACAGTTCTTGGTACTACATTCATACATAAGAGATTCCCACACGACTTCTaGACATACTTTGATTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WSIHILITVLGTTFIHKRFPHDF*TYFDSL Trigger: CAAGGAATCAAAGTATGTCAAGAAGTCGTGTGGGAA...TCTCTTATGTATGAATGTAGTACCAAGAACTGTGATGAGTATATGTATGCTCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085289.12 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGATGTATGATGAGTTTTTaGAGGTCTGTAGCTGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRCMMSF*RSVAVR Trigger: CCTCACAGCTACAGACCTCAAAAAACTCATCATACA...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR CAA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGCTGTTTTACTTTCTGTaGTGGGCTTTTGAATGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLEYCPKIVKCVPMIALLFYFL*WAFECP Trigger: AGGACATTCAAAAGCCCACAACAGAAAGTAAAACAG...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGACTGTTTTACTTTCTGTaGTGGGCTTTTGAATGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRLFYFL*WAFECP Trigger: AGGACATTCAAAAGCCCACAACAGAAAGTAAAACAG...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGAGCTGAGTATTTCCAGTaGCTTAAATCCCGTAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRAEYFQ*LKSRKI Trigger: AATCTTACGGGATTTAAGCAACTGGAAATACTCAGC...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGAGGTATCTTTGATTCCTaGAACTTGGAGAAAAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRGIFDS*NLEKNP Trigger: GGGATTTTTCTCCAAGTTCAAGGAATCAAAGATACC...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
||
| CDS-3UTR CAA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGTTCATGGTTGACACTTaGTGCACTGTTGAAGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLEYCPKIVKCVPMIALFMVDT*CTVEVL Trigger: AAGTACTTCAACAGTGCACAAAGTGTCAACCATGAA...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
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| CDS-3UTR CAA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGATATTCGTTTCATGGTaGACACTTTGTGCACTGTTG | + |
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Preference number: 5 (lower is better) Translates to: LLLEYCPKIVKCVPMIALIFVSW*TLCALL Trigger: CAACAGTGCACAAAGTGTCAACCATGAAACGAATAT...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
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| CDS-3UTR CAA 90 bp | ATCTCTCCCTCTGTTTTTCAGAAGTTAACAGAACAGATACACCTTTCTTTAAGAAAAAGTGCTGATCTTTaGGTTCGAAGCTTTGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: ISPSVFQKLTEQIHLSLRKSADL*VRSFGK Trigger: TTTGCCAAAGCTTCGAACCAAAAGATCAGCACTTTT...TCTTAAAGAAAGGTGTATCTGTTCTGTTAACTTCTGAAAAACAGAGGGAGAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
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| CDS-3UTR CAA 90 bp | TTGCTACTTGAGTACTGTCCAAAAATAGTCAAATGTGTTCCAATGATTGCTTTGTTTTGGTTCGAAGCTTaGGCAAATCGAATATTCGTT | + |
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Preference number: 5 (lower is better) Translates to: LLLEYCPKIVKCVPMIALFWFEA*ANRIFV Trigger: AACGAATATTCGATTTGCCAAAGCTTCGAACCAAAA...CAAAGCAATCATTGGAACACATTTGACTATTTTTGGACAGTACTCAAGTAGCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
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| CDS TCA 72 bp | ACCGAAGATCCTCCAAGACCCCGCGCACGGCCTGGGTaGGGTTGTAGGGTACCGCCTTTGCAAACCGCACTT | + |
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Preference number: 6 (lower is better) Translates to: TEDPPRPRARPG*GCRVPPLQTAL Trigger: AAGTGCGGTTTGCAAAGGCGGTACCCTACAACCTCACCCAGGCCGTGCGCGGGGTCTTGGAGGATCTTCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS CAA 90 bp | TGGTTCAATGTCGAGGGAGTAGCTTTCGATTTCCAGATTGAGCCCTaGAGCTGCGGTGGACCGAAGATCCTCCAAGACCCCGCGCACGGC | + |
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Preference number: 6 (lower is better) Translates to: WFNVEGVAFDFQIEP*SCGGPKILQDPAHG Trigger: GCCGTGCGCGGGGTCTTGGAGGATCTTCGGTCCACCGCAGCTCAAGGGCTCAATCTGGAAATCGAAAGCTACTCCCTCGACATTGAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS GCA 72 bp | GGAGTAGCTTTCGATTTCCAGATTGAGCCCTTGAGCTaGGGTGGACCGAAGATCCTCCAAGACCCCGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: GVAFDFQIEPLS*GGPKILQDPAH Trigger: GTGCGCGGGGTCTTGGAGGATCTTCGGTCCACCGCAGCTCAAGGGCTCAATCTGGAAATCGAAAGCTACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS GCA 72 bp | GGTAGTCCAGGGTCCCGTGGCTCTCATGTCCCTGTCTaGAGCGACACTCTGCTTCCTCTGTCCACTCATTCT | + |
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Preference number: 6 (lower is better) Translates to: GSPGSRGSHVPV*SDTLLPLSTHS Trigger: AGAATGAGTGGACAGAGGAAGCAGAGTGTCGCTGCAGACAGGGACATGAGAGCCACGGGACCCTGGACTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS GCA 72 bp | CCCGTGGCTCTCATGTCCCTGTCTGCAGCGACACTCTaGTTCCTCTGTCCACTCATTCTTTACACACTGGGC | + |
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Preference number: 6 (lower is better) Translates to: PVALMSLSAATL*FLCPLILYTLG Trigger: GCCCAGTGTGTAAAGAATGAGTGGACAGAGGAAGCAGAGTGTCGCTGCAGACAGGGACATGAGAGCCACGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS CCA 72 bp | ACCAGGTTCCTGAGCTTGGTTTGTAGAGTGATCTGGTaGCCTGCATGGAGTTGCTTGTTCTCGGCCGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: TRFLSLVCRVIW*PAWSCLFSAGH Trigger: GTGGCCGGCCGAGAACAAGCAACTCCATGCAGGCCACCAGATCACTCTACAAACCAAGCTCAGGAACCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS CAA 72 bp | ACACGCAGGCTGAAGAATACCACTAGCTCCTGGCCCTaGGTGGCAATGGTCTCGGAGCTGGTGGTGATGAAC | + |
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Preference number: 6 (lower is better) Translates to: TRRLKNTTSSWP*VAMVSELVVMN Trigger: GTTCATCACCACCAGCTCCGAGACCATTGCCACCAAGGGCCAGGAGCTAGTGGTATTCTTCAGCCTGCGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS CAA 72 bp | GTCGAGGGAGTAGCTTTCGATTTCCAGATTGAGCCCTaGAGCTGCGGTGGACCGAAGATCCTCCAAGACCCC | + |
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Preference number: 6 (lower is better) Translates to: VEGVAFDFQIEP*SCGGPKILQDP Trigger: GGGGTCTTGGAGGATCTTCGGTCCACCGCAGCTCAAGGGCTCAATCTGGAAATCGAAAGCTACTCCCTCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS TCA 72 bp | CAGTTGGGACTGTCCCACCAGTTCCTGGTAGTATGGTaGCCCAGAGTTGGTGAGCTCTGCCTTGAACCTGTG | + |
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Preference number: 6 (lower is better) Translates to: QLGLSHQFLVVW*PRVGELCLEPV Trigger: CACAGGTTCAAGGCAGAGCTCACCAACTCTGGGTCACCATACTACCAGGAACTGGTGGGACAGTCCCAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 ENSMUST00000185068.2 |
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| CDS CCA 72 bp | GGTGACCCAGAGTTGGTGAGCTCTGCCTTGAACCTGTaGTTTGGCAGAGAGATGCTGAATTCCACCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GDPELVSSALNL*FGREMLNSTFS Trigger: GGAGAAGGTGGAATTCAGCATCTCTCTGCCAAACCACAGGTTCAAGGCAGAGCTCACCAACTCTGGGTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 ENSMUST00000185068.2 |
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| CDS CCA 72 bp | AATGGTCTCGGAGCTGGTGGTGATGAACCGTACTGTTaGGATGGGTGTGGTCATCTCCAAGAACTGACCCGA | + |
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Preference number: 6 (lower is better) Translates to: NGLGAGGDEPYC*DGCGHLQELTR Trigger: TCGGGTCAGTTCTTGGAGATGACCACACCCATCCCAACAGTACGGTTCATCACCACCAGCTCCGAGACCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS TCA 72 bp | CGAAAGGAAGTTCTGGACTCAAAGTGGCATCCTCTGTaGCATCAGCAAGGGGCTTGGGCAGATCTGGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: RKEVLDSKWHPL*HQQGAWADLVQ Trigger: CTGAACCAGATCTGCCCAAGCCCCTTGCTGATGTCACAGAGGATGCCACTTTGAGTCCAGAACTTCCTTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS GCA 72 bp | GGAAACATCTGTGGGTACCACAGGGGCTTCAGTAGGTaGTTCCAGTGTCTCCATGGAGGCTGTCTCATCTTT | + |
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Preference number: 6 (lower is better) Translates to: GNICGYHRGFSR*FQCLHGGCLIF Trigger: AAAGATGAGACAGCCTCCATGGAGACACTGGAAGCACCTACTGAAGCCCCTGTGGTACCCACAGATGTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 ENSMUST00000185068.2 |
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| CDS CAA 90 bp | AGTTCTGGACTCAAAGTGGCATCCTCTGTGACATCAGCAAGGGGCTaGGGCAGATCTGGTTCAGTGACAGGTCTGAAGAGTGTCCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: SSGLKVASSVTSARG*GRSGSVTGLKSVPV Trigger: TACTGGGACACTCTTCAGACCTGTCACTGAACCAGATCTGCCCAAGCCCCTTGCTGATGTCACAGAGGATGCCACTTTGAGTCCAGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS CCA 72 bp | CACTGCCTCAAGCCTAGGCTCAACGAAAGGAAGTTCTaGACTCAAAGTGGCATCCTCTGTGACATCAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: HCLKPRLNERKF*TQSGILCDISK Trigger: CTTGCTGATGTCACAGAGGATGCCACTTTGAGTCCAGAACTTCCTTTCGTTGAGCCTAGGCTTGAGGCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS CCA 72 bp | GACACATCCATGCCATCTAGGTCTCGGATTGTGTCATaGCTGCTTGTGATCAGCTCTCTGTCACTGGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: DTSMPSRSRIVS*LLVISSLSLED Trigger: ATCCTCCAGTGACAGAGAGCTGATCACAAGCAGCCATGACACAATCCGAGACCTAGATGGCATGGATGTGTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS GCA 72 bp | CCTCTGTCCACTCATTCTTTACACACTGGGCAAATTTaGCACAGTCTAGGAGTTTGCAGGGATCCGCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: PLSTHSLHTGQI*HSLGVCRDPPD Trigger: ATCAGGCGGATCCCTGCAAACTCCTAGACTGTGGCAAATTTGCCCAGTGTGTAAAGAATGAGTGGACAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS CAA 72 bp | GCAGAAGGTTTCTTTCTGGCAGAGGCTGACCCAGTCTaGATATTCCTCTGTGTCAGGAATTCGGTCCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: AEGFFLAEADPV*IFLCVRNSVQK Trigger: TTTCTGGACCGAATTCCTGACACAGAGGAATATCAAGACTGGGTCAGCCTCTGCCAGAAAGAAACCTTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 ENSMUST00000185068.2 |
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| CDS CAA 90 bp | GTCAAAGAGGCAGAAGGTTTCTTTCTGGCAGAGGCTGACCCAGTCTaGATATTCCTCTGTGTCAGGAATTCGGTCCAGAAAGATACGATA | + |
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Preference number: 6 (lower is better) Translates to: VKEAEGFFLAEADPV*IFLCVRNSVQKDTI Trigger: TATCGTATCTTTCTGGACCGAATTCCTGACACAGAGGAATATCAAGACTGGGTCAGCCTCTGCCAGAAAGAAACCTTCTGCCTCTTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 ENSMUST00000185068.2 |
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| CDS TCA 72 bp | TCTGCTGAAGAAGATCTAGGTGCTCCTGGGAGTTGCTaGAGTTTTTCCCAATGTCAAAGAGGCAGAAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SAEEDLGAPGSC*SFSQCQRGRRF Trigger: AAACCTTCTGCCTCTTTGACATTGGGAAAAACTTCAGCAACTCCCAGGAGCACCTAGATCTTCTTCAGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 ENSMUST00000185068.2 |
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| CDS GCA 72 bp | CTCTGTGTCAGGAATTCGGTCCAGAAAGATACGATATaGTTCCCACACGACTTCTTGACATACTCTCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: LCVRNSVQKDTI*FPHDFLTYSQS Trigger: AGACTGAGAGTATGTCAAGAAGTCGTGTGGGAAGCATATCGTATCTTTCTGGACCGAATTCCTGACACAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
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| CDS GCA 72 bp | CTCTGTGTCAGGAATTCGGTCCAGAAAGATACGATATaGTTCCCACACGACTTCTTGACATACTTTGATTCC | + |
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Preference number: 6 (lower is better) Translates to: LCVRNSVQKDTI*FPHDFLTYFDS Trigger: GGAATCAAAGTATGTCAAGAAGTCGTGTGGGAAGCATATCGTATCTTTCTGGACCGAATTCCTGACACAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000185068.2 |
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| CDS CAA 72 bp | GGACAGATGTTAGCAGCTGGGAAAAGTGCTGATCTTTaGGTTCGAAGCTTTGGCAAATCGAATATTCGTTTC | + |
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Preference number: 6 (lower is better) Translates to: GQMLAAGKSADL*VRSFGKSNIRF Trigger: GAAACGAATATTCGATTTGCCAAAGCTTCGAACCAAAAGATCAGCACTTTTCCCAGCTGCTAACATCTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
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| CDS CAA 90 bp | TTCAGACACATGAATAGGTTCTGTTTTACTTTCTGTTGTGGGCTTTaGAATGTCCTTGAGGGTGACACTGAGAATCTCCTTGAGGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: FRHMNRFCFTFCCGL*NVLEGDTENLLEVC Trigger: ACAGACCTCAAGGAGATTCTCAGTGTCACCCTCAAGGACATTCAAAAGCCCACAACAGAAAGTAAAACAGAACCTATTCATGTGTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 ENSMUST00000185068.2 |
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| CDS TCA 72 bp | TCACTTTCAATTTTGTTGGAATCAAGAGACAGTAGATaGCTATCAGGGCTTTTTGCTTCTGCATGGTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SLSILLESRDSR*LSGLFASAWSL Trigger: GAGGGACCATGCAGAAGCAAAAAGCCCTGATAGTCATCTACTGTCTCTTGATTCCAACAAAATTGAAAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085289.12 ENSMUST00000113250.10 |
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| CDS CAA 72 bp | CAGCTGGGAAAAGTGCTGATCTTTTGGTTCGAAGCTTaGGCAAATCGAATATTCGTTTCATGGTTGACACTT | + |
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Preference number: 6 (lower is better) Translates to: QLGKVLIFWFEA*ANRIFVSWLTL Trigger: AAGTGTCAACCATGAAACGAATATTCGATTTGCCAAAGCTTCGAACCAAAAGATCAGCACTTTTCCCAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
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| CDS CAA 90 bp | GTTCGAAGCTTTGGCAAATCGAATATTCGTTTCATGGTTGACACTTaGTGCACTGTTGAAGTACTTTCAATTGTTTCGATTCTTGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: VRSFGKSNIRFMVDT*CTVEVLSIVSILGV Trigger: AACCCCAAGAATCGAAACAATTGAAAGTACTTCAACAGTGCACAAAGTGTCAACCATGAAACGAATATTCGATTTGCCAAAGCTTCGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
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| CDS CCA 72 bp | TGGTTCGAAGCTTTGGCAAATCGAATATTCGTTTCATaGTTGACACTTTGTGCACTGTTGAAGTACTTTCAA | + |
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Preference number: 6 (lower is better) Translates to: WFEALANRIFVS*LTLCALLKYFQ Trigger: TTGAAAGTACTTCAACAGTGCACAAAGTGTCAACCATGAAACGAATATTCGATTTGCCAAAGCTTCGAACCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
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| CDS CAA 72 bp | GTCCAGAAAGATACGATATGCTTCCCACACGACTTCTaGACATACTCTCAGTCTATAATATTCTTGAAGACT | + |
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Preference number: 6 (lower is better) Translates to: VQKDTICFPHDF*TYSQSIIFLKT Trigger: AGTCTTCAAGAATATTATAGACTGAGAGTATGTCAAGAAGTCGTGTGGGAAGCATATCGTATCTTTCTGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
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| CDS CAA 72 bp | CGAATATTCGTTTCATGGTTGACACTTTGTGCACTGTaGAAGTACTTTCAATTGTTTCGATTCTTGGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: RIFVSWLTLCAL*KYFQLFRFLGF Trigger: AAACCCCAAGAATCGAAACAATTGAAAGTACTTCAACAGTGCACAAAGTGTCAACCATGAAACGAATATTCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
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| CDS CAA 72 bp | CTTGACATACTCTCAGTCTATAATATTCTTGAAGACTaGCTAAAATCTGTCTCAAGGATTCCTGTGGACAGA | + |
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Preference number: 6 (lower is better) Translates to: LDILSVYNILED*LKSVSRIPVDR Trigger: TCTGTCCACAGGAATCCTTGAGACAGATTTTAGCAAGTCTTCAAGAATATTATAGACTGAGAGTATGTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
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| CDS CAA 90 bp | TTGGCAAATCGAATATTCGTTTCATGGTTGACACTTTGTGCACTGTaGAAGTACTTTCAATTGTTTCGATTCTTGGGGTTTTGTCTATGT | + |
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Preference number: 6 (lower is better) Translates to: LANRIFVSWLTLCAL*KYFQLFRFLGFCLC Trigger: ACATAGACAAAACCCCAAGAATCGAAACAATTGAAAGTACTTCAACAGTGCACAAAGTGTCAACCATGAAACGAATATTCGATTTGCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113250.10 |
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