Pregenerated sensors for IMPDH2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000062867

Ensembl transcript IDs: ENSMUST00000081111.14, ENSMUST00000193421.2, ENSMUST00000194904.2

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CACAATGGGCAACTTTCCCTTTTTACTTCGCTGCAGAATCTCATTTaGCTCTTTCAGAGTGACGCCGGCAGGGGCGACCACCAAATCTTC	+
Preference number: 5 (lower is better) Translates to: HNGQLSLFTSLQNLI*LFQSDAGRGDHQIF Trigger: GAAGATTTGGTGGTCGCCCCTGCCGGCGTCACTCTGAAAGAGGCAAATGAGATTCTGCAGCGAAGTAAAAAGGGAAAGTTGCCCATTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081111.14 ENSMUST00000193421.2
CDS TCA 90 bp	CCCATCATGACTGTGGAAGCCCCAAGAGCCAAAGCTTTGGCAATATaGCCCACATTTTGGATTCCTCCATCAGCAATAACAGGAACACCA	+
Preference number: 5 (lower is better) Translates to: PIMTVEAPRAKALAI*PTFWIPPSAITGTP Trigger: TGGTGTTCCTGTTATTGCTGATGGAGGAATCCAAAATGTGGGTCATATTGCCAAAGCTTTGGCTCTTGGGGCTTCCACAGTCATGATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081111.14 ENSMUST00000194904.2
CDS GCA 90 bp	ACCAAATCTTCCCTCTTAGTCATGATCTCTTCCAAGAACCGGTCATaGTCTTCCTCCTTGAGGAAATCAATGTCCCTTGAGGAGATGATG	+
Preference number: 5 (lower is better) Translates to: TKSSLLVMISSKNRS*SSSLRKSMSLEEMM Trigger: CATCATCTCCTCAAGGGACATTGATTTCCTCAAGGAGGAAGAGCATGACCGGTTCTTGGAAGAGATCATGACTAAGAGGGAAGATTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081111.14 ENSMUST00000193421.2
CDS TCA 90 bp	GTCTTTAGTGTAATCTTCTTAGTTAGAGCAGACGTCAAGTCCACCTaGTCTGCAGTGAAGTCGATATACCCAGGAAGAATGAGAAAATCA	+
Preference number: 5 (lower is better) Translates to: VFSVIFLVRADVKST*SAVKSIYPGRMRKS Trigger: TGATTTTCTCATTCTTCCTGGGTATATCGACTTCACTGCAGATCAGGTGGACTTGACGTCTGCTCTAACTAAGAAGATTACACTAAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081111.14 ENSMUST00000193421.2
CDS CCA 90 bp	TGTAGACTGGGATACTTCTCCTTGATGTATTTGATCATATTGATTTaGAAGATGGAGTTTCCCTGGGAAGAGTCCAAAACCACTACATCC	+
Preference number: 5 (lower is better) Translates to: CRLGYFSLMYLIILI*KMEFPWEESKTTTS Trigger: GGATGTAGTGGTTTTGGACTCTTCCCAGGGAAACTCCATCTTCCAAATCAATATGATCAAATACATCAAGGAGAAGTATCCCAGTCTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081111.14 ENSMUST00000194904.2
CDS CCA 72 bp	AGAAGGGCATTTGGGGCTGTGGGACTTTATGTCTGGTaGGATCTTGGGAGCCGCTTCCTGGGTGATGCAGAT	+
Preference number: 6 (lower is better) Translates to: RRAFGAVGLYVW*DLGSRFLGDAD Trigger: ATCTGCATCACCCAGGAAGCGGCTCCCAAGATCCCACCAGACATAAAGTCCCACAGCCCCAAATGCCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194904.2
CDS CCA 72 bp	AGTAGAAGGGCATTTGGGGCTGTGGGACTTTATGTCTaGTGGGATCTTGGGAGCCGCTTCCTGGGTGATGCA	+
Preference number: 6 (lower is better) Translates to: SRRAFGAVGLYV*WDLGSRFLGDA Trigger: TGCATCACCCAGGAAGCGGCTCCCAAGATCCCACCAGACATAAAGTCCCACAGCCCCAAATGCCCTTCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194904.2
CDS CAA 72 bp	CATTTGGGGCTGTGGGACTTTATGTCTGGTGGGATCTaGGGAGCCGCTTCCTGGGTGATGCAGATGGAACCA	+
Preference number: 6 (lower is better) Translates to: HLGLWDFMSGGI*GAASWVMQMEP Trigger: TGGTTCCATCTGCATCACCCAGGAAGCGGCTCCCAAGATCCCACCAGACATAAAGTCCCACAGCCCCAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194904.2
CDS GCA 72 bp	CAACTTTCCCTTTTTACTTCGCTGCAGAATCTCATTTaGCTCTTTCAGAGTGACGCCGGCAGGGGCGACCAC	+
Preference number: 6 (lower is better) Translates to: QLSLFTSLQNLI*LFQSDAGRGDH Trigger: GTGGTCGCCCCTGCCGGCGTCACTCTGAAAGAGGCAAATGAGATTCTGCAGCGAAGTAAAAAGGGAAAGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081111.14 ENSMUST00000193421.2
CDS CAA 90 bp	CCCATGCCGACTCGCAAAGCATCTACACCTGCATCTATGAGGTTCTaGGCTTGCGCAGCAGTGACTACATTGCCTCCAATGACCTGTAGA	+
Preference number: 6 (lower is better) Translates to: PMPTRKASTPASMRF*ACAAVTTLPPMTCR Trigger: TCTACAGGTCATTGGAGGCAATGTAGTCACTGCTGCGCAAGCCAAGAACCTCATAGATGCAGGTGTAGATGCTTTGCGAGTCGGCATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081111.14 ENSMUST00000194904.2
CDS CAA 72 bp	ACTCGCAAAGCATCTACACCTGCATCTATGAGGTTCTaGGCTTGCGCAGCAGTGACTACATTGCCTCCAATG	+
Preference number: 6 (lower is better) Translates to: TRKASTPASMRF*ACAAVTTLPPM Trigger: CATTGGAGGCAATGTAGTCACTGCTGCGCAAGCCAAGAACCTCATAGATGCAGGTGTAGATGCTTTGCGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081111.14 ENSMUST00000194904.2
CDS CAA 72 bp	TTGTCCTGCACTGCCCCTGAAACTCCTTGGGCCACTTaGATTTTGTCAGCTTCACTGAAGTATCGGTTCTGG	+
Preference number: 6 (lower is better) Translates to: LSCTAPETPWAT*ILSASLKYRFW Trigger: CCAGAACCGATACTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAAGGAGTTTCAGGGGCAGTGCAGGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081111.14 ENSMUST00000194904.2
CDS GCA 72 bp	TCCCTCTTAGTCATGATCTCTTCCAAGAACCGGTCATaGTCTTCCTCCTTGAGGAAATCAATGTCCCTTGAG	+
Preference number: 6 (lower is better) Translates to: SLLVMISSKNRS*SSSLRKSMSLE Trigger: CTCAAGGGACATTGATTTCCTCAAGGAGGAAGAGCATGACCGGTTCTTGGAAGAGATCATGACTAAGAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081111.14 ENSMUST00000193421.2
CDS TCA 72 bp	ACTGTGGAAGCCCCAAGAGCCAAAGCTTTGGCAATATaGCCCACATTTTGGATTCCTCCATCAGCAATAACA	+
Preference number: 6 (lower is better) Translates to: TVEAPRAKALAI*PTFWIPPSAIT Trigger: TGTTATTGCTGATGGAGGAATCCAAAATGTGGGTCATATTGCCAAAGCTTTGGCTCTTGGGGCTTCCACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081111.14 ENSMUST00000194904.2
CDS TCA 72 bp	GTAATCTTCTTAGTTAGAGCAGACGTCAAGTCCACCTaGTCTGCAGTGAAGTCGATATACCCAGGAAGAATG	+
Preference number: 6 (lower is better) Translates to: VIFLVRADVKST*SAVKSIYPGRM Trigger: CATTCTTCCTGGGTATATCGACTTCACTGCAGATCAGGTGGACTTGACGTCTGCTCTAACTAAGAAGATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081111.14 ENSMUST00000193421.2
CDS CAA 72 bp	CCCAAGAGCCAAAGCTTTGGCAATATGACCCACATTTaGGATTCCTCCATCAGCAATAACAGGAACACCAAA	+
Preference number: 6 (lower is better) Translates to: PKSQSFGNMTHI*DSSISNNRNTK Trigger: TTTGGTGTTCCTGTTATTGCTGATGGAGGAATCCAAAATGTGGGTCATATTGCCAAAGCTTTGGCTCTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081111.14 ENSMUST00000194904.2
CDS CAA 90 bp	TTGCCTCCAATGACCTGTAGACTGGGATACTTCTCCTTGATGTATTaGATCATATTGATTTGGAAGATGGAGTTTCCCTGGGAAGAGTCC	+
Preference number: 6 (lower is better) Translates to: LPPMTCRLGYFSLMY*IILIWKMEFPWEES Trigger: GGACTCTTCCCAGGGAAACTCCATCTTCCAAATCAATATGATCAAATACATCAAGGAGAAGTATCCCAGTCTACAGGTCATTGGAGGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081111.14 ENSMUST00000194904.2
CDS CAA 90 bp	GTGACTACATTGCCTCCAATGACCTGTAGACTGGGATACTTCTCCTaGATGTATTTGATCATATTGATTTGGAAGATGGAGTTTCCCTGG	+
Preference number: 6 (lower is better) Translates to: VTTLPPMTCRLGYFS*MYLIILIWKMEFPW Trigger: CCAGGGAAACTCCATCTTCCAAATCAATATGATCAAATACATCAAGGAGAAGTATCCCAGTCTACAGGTCATTGGAGGCAATGTAGTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081111.14 ENSMUST00000194904.2
CDS CAA 72 bp	ATGACCTGTAGACTGGGATACTTCTCCTTGATGTATTaGATCATATTGATTTGGAAGATGGAGTTTCCCTGG	+
Preference number: 6 (lower is better) Translates to: MTCRLGYFSLMY*IILIWKMEFPW Trigger: CCAGGGAAACTCCATCTTCCAAATCAATATGATCAAATACATCAAGGAGAAGTATCCCAGTCTACAGGTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081111.14 ENSMUST00000194904.2
CDS CAA 72 bp	TTGCCTCCAATGACCTGTAGACTGGGATACTTCTCCTaGATGTATTTGATCATATTGATTTGGAAGATGGAG	+
Preference number: 6 (lower is better) Translates to: LPPMTCRLGYFS*MYLIILIWKME Trigger: CTCCATCTTCCAAATCAATATGATCAAATACATCAAGGAGAAGTATCCCAGTCTACAGGTCATTGGAGGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081111.14 ENSMUST00000194904.2

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