Pregenerated sensors for IMPDH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003500Ensembl transcript IDs: ENSMUST00000078155.12, ENSMUST00000159124.8, ENSMUST00000160878.8, ENSMUST00000162099.8, ENSMUST00000162242.2, ENSMUST00000162739.8
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATaGGGAAGTAAGCCGAGGAGCAGGCCCCATGGGAGCCTCAAGCCA | + |
|
Preference number: 1 (lower is better) Translates to: MKGRWSSAGPPWAQR*GSKPRSRPHGSLKP Trigger: TGGCTTGAGGCTCCCATGGGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR CCA 90 bp | GGTGAATCAGGAATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTaGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGGCCCCATGGG | + |
|
Preference number: 1 (lower is better) Translates to: GESGMKGRWSSAGPP*AQRWGSKPRSRPHG Trigger: CCCATGGGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATTCCTGATTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGGCCCCATGGGACTGACTCTGTGGGGTTaGCCGGGAGAGGGGCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: ALPGLRDGEVSRGAGPMGLTLWG*PGEGPQ Trigger: CTGTGGCCCCTCTCCCGGGCAACCCCACAGAGTCAG...TCCCATGGGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGGCCCGGCTACCTGACTCTGTaGGGTTGCCCGGGAGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: SAGPPWAQRWGSKPRSRPGYLTL*GCPGEG Trigger: CCCCTCTCCCGGGCAACCCCACAGAGTCAGGTAGCC...GGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGCTGACTCTGTGGGGTTaGCCGGGAGAGGGGCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: RWSSAGPPWAQRWGSKPRLTLWG*PGEGPQ Trigger: CTGTGGCCCCTCTCCCGGGCAACCCCACAGAGTCAG...CCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGGCTACCTGACTCTGTaGGGTTGCCCGGGAGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: GGHQQALPGLRDGEVSRGGYLTL*GCPGEG Trigger: CCCCTCTCCCGGGCAACCCCACAGAGTCAGGTAGCC...TCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGGGCTACCTGACTCTGTaGGGTTGCCCGGGAGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: RWSSAGPPWAQRWGSKPRGYLTL*GCPGEG Trigger: CCCCTCTCCCGGGCAACCCCACAGAGTCAGGTAGCC...CCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCTGACTCTGTGGGGTTaGCCGGGAGAGGGGCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: KGRWSSAGPPWAQRWGSKLTLWG*PGEGPQ Trigger: CTGTGGCCCCTCTCCCGGGCAACCCCACAGAGTCAG...CTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGGGCTACCTGACTCTGTaGGGTTGCCCGGGAGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: NEGQVVISRPSLGSEMGKGYLTL*GCPGEG Trigger: CCCCTCTCCCGGGCAACCCCACAGAGTCAGGTAGCC...CTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGACTGGGCTCAGGGAACTaGAGAAGGGGGAACCCGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GMKGRWSSAGPPWAQRWGLGSGN*RRGNPE Trigger: TTCCGGGTTCCCCCTTCTTCAGTTCCCTGAGCCCAG...TCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCACTGGGCTCAGGGAACTaGAGAAGGGGGAACCCGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GHQQALPGLRDGEVSRGALGSGN*RRGNPE Trigger: TTCCGGGTTCCCCCTTCTTCAGTTCCCTGAGCCCAG...TGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGACTGGGCTCAGGGAACTaGAGAAGGGGGAACCCGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GGHQQALPGLRDGEVSRGLGSGN*RRGNPE Trigger: TTCCGGGTTCCCCCTTCTTCAGTTCCCTGAGCCCAG...TCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCAGGAATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGCTGACTCTGTGGGGTTaGCCGGGAGAGGGGCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: IRNEGQVVISRPSLGSEMLTLWG*PGEGPQ Trigger: CTGTGGCCCCTCTCCCGGGCAACCCCACAGAGTCAG...CATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATTCCTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGGCCCGTCAGAGTTGGACATTaGGCCAGAGCAGGCTGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: SAGPPWAQRWGSKPRSRPVRVGH*ARAGCS Trigger: ACTGCAGCCTGCTCTGGCCCAATGTCCAACTCTGAC...GGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGGAGGAGCAGGCCCCATaGGAGCCTCAAGCCAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: NEGQVVISRPSLGSEMGKEEQAP*EPQARG Trigger: TCCTCTGGCTTGAGGCTCCCATGGGGCCTGCTCCTC...CTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGGAGGAGCAGGCCCCATaGGAGCCTCAAGCCAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KGRWSSAGPPWAQRWGSKEEQAP*EPQARG Trigger: TCCTCTGGCTTGAGGCTCCCATGGGGCCTGCTCCTC...CTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR TCA 90 bp | AATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGCTGGGCTCAGGGAACTaGAGAAGGGGGAACCCGGAA | + |
|
Preference number: 2 (lower is better) Translates to: NEGQVVISRPSLGSEMGKLGSGN*RRGNPE Trigger: TTCCGGGTTCCCCCTTCTTCAGTTCCCTGAGCCCAG...CTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCAGGAATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGACAGTGCCACATGGCTaGGAGGACAGCACTCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: IRNEGQVVISRPSLGSEMTVPHG*EDSTPG Trigger: CCCTGGAGTGCTGTCCTCTCAGCCATGTGGCACTGT...CATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATTCCTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGGTCAGAGTTGGACATTaGGCCAGAGCAGGCTGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: RWSSAGPPWAQRWGSKPRVRVGH*ARAGCS Trigger: ACTGCAGCCTGCTCTGGCCCAATGTCCAACTCTGAC...CCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGTCAGAGTTGGACATTaGGCCAGAGCAGGCTGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: GHQQALPGLRDGEVSRGAVRVGH*ARAGCS Trigger: ACTGCAGCCTGCTCTGGCCCAATGTCCAACTCTGAC...TGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGTCAGAGTTGGACATTaGGCCAGAGCAGGCTGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: GGHQQALPGLRDGEVSRGVRVGH*ARAGCS Trigger: ACTGCAGCCTGCTCTGGCCCAATGTCCAACTCTGAC...TCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGGTCAGAGTTGGACATTaGGCCAGAGCAGGCTGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: NEGQVVISRPSLGSEMGKVRVGH*ARAGCS Trigger: ACTGCAGCCTGCTCTGGCCCAATGTCCAACTCTGAC...CTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGAGAGCCAAGGCTGACTaGGCTCAGGGAACTGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: NEGQVVISRPSLGSEMGKRAKAD*AQGTEE Trigger: TTCTTCAGTTCCCTGAGCCCAGTCAGCCTTGGCTCT...CTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGGCCCCATGGGACCTGACTCTGTGGGGTaGCCCGGGAGAGGGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: ALPGLRDGEVSRGAGPMGPDSVG*PGRGAT Trigger: TGTGGCCCCTCTCCCGGGCAACCCCACAGAGTCAGG...TCCCATGGGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGGCCCCCTGACTCTGTGGGGTaGCCCGGGAGAGGGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: SAGPPWAQRWGSKPRSRPPDSVG*PGRGAT Trigger: TGTGGCCCCTCTCCCGGGCAACCCCACAGAGTCAGG...GGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCACCTGACTCTGTGGGGTaGCCCGGGAGAGGGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: GHQQALPGLRDGEVSRGAPDSVG*PGRGAT Trigger: TGTGGCCCCTCTCCCGGGCAACCCCACAGAGTCAGG...TGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR CCA 72 bp | AGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATaGGGAAGTAAGCCGAGGAGCAGGCCCCATGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RWSSAGPPWAQR*GSKPRSRPHGS Trigger: GCTCCCATGGGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGCCTGACTCTGTGGGGTaGCCCGGGAGAGGGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: NEGQVVISRPSLGSEMGKPDSVG*PGRGAT Trigger: TGTGGCCCCTCTCCCGGGCAACCCCACAGAGTCAGG...CTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTCCTGACTCTGTGGGGTaGCCCGGGAGAGGGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: MKGRWSSAGPPWAQRWGSPDSVG*PGRGAT Trigger: TGTGGCCCCTCTCCCGGGCAACCCCACAGAGTCAGG...ACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGGCCCGGTCAGAGTTGGACATaGGGCCAGAGCAGGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SAGPPWAQRWGSKPRSRPGQSWT*GQSRLQ Trigger: CTGCAGCCTGCTCTGGCCCAATGTCCAACTCTGACC...GGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGGTCAGAGTTGGACATaGGGCCAGAGCAGGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GHQQALPGLRDGEVSRGAGQSWT*GQSRLQ Trigger: CTGCAGCCTGCTCTGGCCCAATGTCCAACTCTGACC...TGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAGGTCAGAGTTGGACATaGGGCCAGAGCAGGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GMKGRWSSAGPPWAQRWGGQSWT*GQSRLQ Trigger: CTGCAGCCTGCTCTGGCCCAATGTCCAACTCTGACC...TCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | GGTTGCCCGGGAGAGGGGCCACAGGCCCCTCAAGGACTCCACTCCTCTCCCTGGCAGCACCGGCCTGAGTaGGCAGGTCCAGGCGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: GCPGEGPQAPQGLHSSPWQHRPE*AGPGGI Trigger: AATACCGCCTGGACCTGCTCACTCAGGCCGGTGCTG...CCAGGGAGAGGAGTGGAGTCCTTGAGGGGCCTGTGGCCCCTCTCCCGGGCAACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGGCCCCATGGGATCATGTCCCGGGTGTTaGCGGGCTCCGGGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALPGLRDGEVSRGAGPMGSCPGC*RAPGSG Trigger: TCCAGAGCCCGGAGCCCGGCAACACCCGGGACATGA...TCCCATGGGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGGCCCCAGCACCGGCCTGAGTaGGCAGGTCCAGGCGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: SAGPPWAQRWGSKPRSRPQHRPE*AGPGGI Trigger: AATACCGCCTGGACCTGCTCACTCAGGCCGGTGCTG...GGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCGGGCGCTGTACCGCTaGGCCGCGGTCTCATGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KGRWSSAGPPWAQRWGSKRALYR*AAVSCP Trigger: GGGACATGAGACCGCGGCGCAGCGGTACAGCGCCCG...CTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGGCCCCAAGTGCCAGGGCTTTaGCCACATGGCCCACGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAGPPWAQRWGSKPRSRPQVPGL*PHGPRS Trigger: AGACCGTGGGCCATGTGGTCAAAGCCCTGGCACTTG...GGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGGCCCCATGGGACAAGTGCCAGGGCTTTaGCCACATGGCCCACGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALPGLRDGEVSRGAGPMGQVPGL*PHGPRS Trigger: AGACCGTGGGCCATGTGGTCAAAGCCCTGGCACTTG...TCCCATGGGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGGCCCTGGAACCACAGCCCATaGCCACACGAAGCCCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SAGPPWAQRWGSKPRSRPWNHSP*PHEARP Trigger: TGGACGGGCTTCGTGTGGGCATGGGCTGTGGTTCCA...GGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGGCCCCATGGGAGGAAGTCGTTGTAGGTaGGGCCATCCGCGTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ALPGLRDGEVSRGAGPMGGSRCR*GHPRWQ Trigger: TTGCCAACGCGGATGGCCTCACCTACAACGACTTCC...TCCCATGGGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 |
||
| CDS-3UTR TCA 90 bp | GGAATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGACAGCACCGGCCTGAGTaGGCAGGTCCAGGCGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: GMKGRWSSAGPPWAQRWGQHRPE*AGPGGI Trigger: AATACCGCCTGGACCTGCTCACTCAGGCCGGTGCTG...TCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | GGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCACAGCACCGGCCTGAGTaGGCAGGTCCAGGCGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: GHQQALPGLRDGEVSRGAQHRPE*AGPGGI Trigger: AATACCGCCTGGACCTGCTCACTCAGGCCGGTGCTG...TGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | GGTTGCCCGGGAGAGGGGCCACAGGCCCCTCAAGGACTCCACTCCTCTCCCTGGCAGCCTCACCCCATCTaGGAAGAAGTATTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GCPGEGPQAPQGLHSSPWQPHPI*EEVFTR Trigger: CCTGGTGAATACTTCTTCTCAGATGGGGTGAGGCTG...CCAGGGAGAGGAGTGGAGTCCTTGAGGGGCCTGTGGCCCCTCTCCCGGGCAACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | AATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGCAGCACCGGCCTGAGTaGGCAGGTCCAGGCGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: NEGQVVISRPSLGSEMGKQHRPE*AGPGGI Trigger: AATACCGCCTGGACCTGCTCACTCAGGCCGGTGCTG...CTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGACAAGTGCCAGGGCTTTaGCCACATGGCCCACGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGHQQALPGLRDGEVSRGQVPGL*PHGPRS Trigger: AGACCGTGGGCCATGTGGTCAAAGCCCTGGCACTTG...TCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGCAAGTGCCAGGGCTTTaGCCACATGGCCCACGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RWSSAGPPWAQRWGSKPRQVPGL*PHGPRS Trigger: AGACCGTGGGCCATGTGGTCAAAGCCCTGGCACTTG...CCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| CDS-3UTR GCA 90 bp | GGTTGCCCGGGAGAGGGGCCACAGGCCCCTCAAGGACTCCACTCCTCTCCCTGGTCCCATGAGAGCCATTaGAATGGCCATATCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GCPGEGPQAPQGLHSSPWSHESH*NGHISL Trigger: GAGGCTGATATGGCCATTGCAATGGCTCTCATGGGA...CCAGGGAGAGGAGTGGAGTCCTTGAGGGGCCTGTGGCCCCTCTCCCGGGCAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGATGGAACCACAGCCCATaGCCACACGAAGCCCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGHQQALPGLRDGEVSRGWNHSP*PHEARP Trigger: TGGACGGGCTTCGTGTGGGCATGGGCTGTGGTTCCA...TCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | GGAATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAGGAAGTCGTTGTAGGTaGGGCCATCCGCGTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GMKGRWSSAGPPWAQRWGGSRCR*GHPRWQ Trigger: TTGCCAACGCGGATGGCCTCACCTACAACGACTTCC...TCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 |
||
| CDS-3UTR TCA 90 bp | AATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGCAAGTGCCAGGGCTTTaGCCACATGGCCCACGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NEGQVVISRPSLGSEMGKQVPGL*PHGPRS Trigger: AGACCGTGGGCCATGTGGTCAAAGCCCTGGCACTTG...CTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGGCCCCATGGGACAGCCTCACCCCATCTaGGAAGAAGTATTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALPGLRDGEVSRGAGPMGQPHPI*EEVFTR Trigger: CCTGGTGAATACTTCTTCTCAGATGGGGTGAGGCTG...TCCCATGGGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | ATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTGGAAGTCGTTGTAGGTaGGGCCATCCGCGTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: MKGRWSSAGPPWAQRWGSGSRCR*GHPRWQ Trigger: TTGCCAACGCGGATGGCCTCACCTACAACGACTTCC...ACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGGCCCATGGAGCCTTTATCCTaGATGGAACCGGAGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: SAGPPWAQRWGSKPRSRPMEPLS*MEPETP Trigger: AGGTGTCTCCGGTTCCATCCAGGATAAAGGCTCCAT...GGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | GGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGCTACCAGCTCATCTTaGTCGTTGACTATGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHQQALPGLRDGEVSRGAATSSS*SLTMGS Trigger: GCTGCCCATAGTCAACGATCAAGATGAGCTGGTAGC...TGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | GGAATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAGCTACCAGCTCATCTTaGTCGTTGACTATGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GMKGRWSSAGPPWAQRWGATSSS*SLTMGS Trigger: GCTGCCCATAGTCAACGATCAAGATGAGCTGGTAGC...TCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | GGAATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAACCAATTCCTCCCATaGGAGCCATTGCAATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GMKGRWSSAGPPWAQRWGNQFLP*EPLQWP Trigger: TGGCCATTGCAATGGCTCTCATGGGAGGAATTGGTT...TCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | GGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGCTCATCTTGATCGTTaGCTATGGGCAGCTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GHQQALPGLRDGEVSRGAAHLDR*LWAASL Trigger: AAGGGAAGCTGCCCATAGTCAACGATCAAGATGAGC...TGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGGCTCATCTTGATCGTTaGCTATGGGCAGCTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RWSSAGPPWAQRWGSKPRAHLDR*LWAASL Trigger: AAGGGAAGCTGCCCATAGTCAACGATCAAGATGAGC...CCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | ATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTGCTACCAGCTCATCTTaGTCGTTGACTATGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MKGRWSSAGPPWAQRWGSATSSS*SLTMGS Trigger: GCTGCCCATAGTCAACGATCAAGATGAGCTGGTAGC...ACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | AAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCAGCCTCACCCCATCTaGGAAGAAGTATTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGRWSSAGPPWAQRWGSKQPHPI*EEVFTR Trigger: CCTGGTGAATACTTCTTCTCAGATGGGGTGAGGCTG...CTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | AATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGCAGCCTCACCCCATCTaGGAAGAAGTATTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NEGQVVISRPSLGSEMGKQPHPI*EEVFTR Trigger: CCTGGTGAATACTTCTTCTCAGATGGGGTGAGGCTG...CTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| CDS-3UTR GCA 90 bp | GGAATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGATCCCATGAGAGCCATTaGAATGGCCATATCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GMKGRWSSAGPPWAQRWGSHESH*NGHISL Trigger: GAGGCTGATATGGCCATTGCAATGGCTCTCATGGGA...TCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAAGCCATGCTGTATCTTaGCCTCCAGAACATCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGHQQALPGLRDGEVSRGSHAVS*PPEHHP Trigger: TGGGTGATGTTCTGGAGGCCAAGATACAGCATGGCT...TCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR CCA 90 bp | GGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAAGCCATGCTGTATCTTaGCCTCCAGAACATCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: GHQQALPGLRDGEVSRGASHAVS*PPEHHP Trigger: TGGGTGATGTTCTGGAGGCCAAGATACAGCATGGCT...TGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | ATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAACCAATTCCTCCCATaGGAGCCATTGCAATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MKGRWSSAGPPWAQRWGSNQFLP*EPLQWP Trigger: TGGCCATTGCAATGGCTCTCATGGGAGGAATTGGTT...ACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | AAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGGCTCATCTTGATCGTTaGCTATGGGCAGCTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGRWSSAGPPWAQRWGSKAHLDR*LWAASL Trigger: AAGGGAAGCTGCCCATAGTCAACGATCAAGATGAGC...CTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | ATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTGCTCATCTTGATCGTTaGCTATGGGCAGCTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: MKGRWSSAGPPWAQRWGSAHLDR*LWAASL Trigger: AAGGGAAGCTGCCCATAGTCAACGATCAAGATGAGC...ACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGGAATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGCTACCAGCTCATCTTaGTCGTTGACTATGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IRNEGQVVISRPSLGSEMATSSS*SLTMGS Trigger: GCTGCCCATAGTCAACGATCAAGATGAGCTGGTAGC...CATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATTCCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR GCA 90 bp | AATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTCCCATGAGAGCCATTaGAATGGCCATATCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NEGQVVISRPSLGSEMGKSHESH*NGHISL Trigger: GAGGCTGATATGGCCATTGCAATGGCTCTCATGGGA...CTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGAGCCATGCTGTATCTTaGCCTCCAGAACATCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGRWSSAGPPWAQRWGSKSHAVS*PPEHHP Trigger: TGGGTGATGTTCTGGAGGCCAAGATACAGCATGGCT...CTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTATGGAGCCTTTATCCTaGATGGAACCGGAGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: MKGRWSSAGPPWAQRWGSMEPLS*MEPETP Trigger: AGGTGTCTCCGGTTCCATCCAGGATAAAGGCTCCAT...ACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGGAATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGCTCAAACTTAGCCATTaGAATGGCCATATCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IRNEGQVVISRPSLGSEMLKLSH*NGHISL Trigger: GAGGCTGATATGGCCATTGCAATGGCTAAGTTTGAG...CATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATTCCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160878.8 |
||
| CDS GCA 90 bp | TGTTGCCGGGCTCCGGGCTCTGGAGCGGCAGCCGCTCCACCTCCCTaGAGCAGCGGCGAGAGCAGCCCGGACTCCGGTGGGGGTGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CCRAPGSGAAAAPPP*SSGESSPDSGGGES Trigger: GCTCTCACCCCCACCGGAGTCCGGGCTGCTCTCGCCGCTGCTGCAGGGAGGTGGAGCGGCTGCCGCTCCAGAGCCCGGAGCCCGGCAACA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162739.8 |
||
| CDS-3UTR CAA 90 bp | GCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGGCCCCATGGGACTCATGTCCCGGGTGTaGCCGGGCTCCGGGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ALPGLRDGEVSRGAGPMGLMSRV*PGSGLW Trigger: CCAGAGCCCGGAGCCCGGCAACACCCGGGACATGAG...TCCCATGGGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162739.8 |
||
| CDS-3UTR CAA 90 bp | GGTTGCCCGGGAGAGGGGCCACAGGCCCCTCAAGGACTCCACTCCTCTCCCTGGCCAAGTGCCAGGGCTTaGACCACATGGCCCACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GCPGEGPQAPQGLHSSPWPSARA*TTWPTV Trigger: GACCGTGGGCCATGTGGTCAAAGCCCTGGCACTTGG...CCAGGGAGAGGAGTGGAGTCCTTGAGGGGCCTGTGGCCCCTCTCCCGGGCAACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGAGCAGGCCCCCAAGTGCCAGGGCTTaGACCACATGGCCCACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SAGPPWAQRWGSKPRSRPPSARA*TTWPTV Trigger: GACCGTGGGCCATGTGGTCAAAGCCCTGGCACTTGG...GGGCCTGCTCCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| CDS-3UTR CAA 90 bp | GGAATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGACCAAGTGCCAGGGCTTaGACCACATGGCCCACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GMKGRWSSAGPPWAQRWGPSARA*TTWPTV Trigger: GACCGTGGGCCATGTGGTCAAAGCCCTGGCACTTGG...TCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| CDS-3UTR CAA 90 bp | AATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGCCAAGTGCCAGGGCTTaGACCACATGGCCCACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NEGQVVISRPSLGSEMGKPSARA*TTWPTV Trigger: GACCGTGGGCCATGTGGTCAAAGCCCTGGCACTTGG...CTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| CDS-3UTR CAA 90 bp | ATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTCCAAGTGCCAGGGCTTaGACCACATGGCCCACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: MKGRWSSAGPPWAQRWGSPSARA*TTWPTV Trigger: GACCGTGGGCCATGTGGTCAAAGCCCTGGCACTTGG...ACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162242.2 ENSMUST00000162739.8 |
||
| CDS-3UTR CAA 90 bp | GGTTGCCCGGGAGAGGGGCCACAGGCCCCTCAAGGACTCCACTCCTCTCCCTGGCCTTGCTCAAACTTCTaGACCTTCCGTACTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: GCPGEGPQAPQGLHSSPWPCSNF*TFRTSL Trigger: CAATGAAGTACGGAAGGTCAAGAAGTTTGAGCAAGG...CCAGGGAGAGGAGTGGAGTCCTTGAGGGGCCTGTGGCCCCTCTCCCGGGCAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR CAA 90 bp | AATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGAAGCCATGCTGTATCTaGGCCTCCAGAACATCACCC | + |
|
Preference number: 5 (lower is better) Translates to: NEGQVVISRPSLGSEMGKKPCCI*ASRTSP Trigger: GGGTGATGTTCTGGAGGCCAAGATACAGCATGGCTT...CTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000160878.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR CAA 90 bp | GGAATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGACCTTGCTCAAACTTCTaGACCTTCCGTACTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: GMKGRWSSAGPPWAQRWGPCSNF*TFRTSL Trigger: CAATGAAGTACGGAAGGTCAAGAAGTTTGAGCAAGG...TCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCGAGGCCTTGCTCAAACTTCTaGACCTTCCGTACTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: RWSSAGPPWAQRWGSKPRPCSNF*TFRTSL Trigger: CAATGAAGTACGGAAGGTCAAGAAGTTTGAGCAAGG...CCTCGGCTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS-3UTR CAA 90 bp | AATGAAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGGTCTGTGATGAAGCCTaGCTCAAACTTAGCCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: NEGQVVISRPSLGSEMGKVCDEA*LKLSHC Trigger: GCAATGGCTAAGTTTGAGCAAGGCTTCATCACAGAC...CTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTTCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160878.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGCAGGTGGTCATCAGCAGGCCCTCCCTGGGCTCAGAGATGGGGAAGTAAGCCTTGCTCAAACTTCTaGACCTTCCGTACTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: KGRWSSAGPPWAQRWGSKPCSNF*TFRTSL Trigger: CAATGAAGTACGGAAGGTCAAGAAGTTTGAGCAAGG...CTTACTTCCCCATCTCTGAGCCCAGGGAGGGCCTGCTGATGACCACCTGCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078155.12 ENSMUST00000159124.8 ENSMUST00000162099.8 ENSMUST00000162739.8 |
||
| CDS CAA 90 bp | CAGGCGGGCGCTGTACCGCTGCGCCGCGGTCTCATGTCCCGGGTGTaGCCGGGCTCCGGGCTCTGGAGCGGCAGCCGCTCCACCTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QAGAVPLRRGLMSRV*PGSGLWSGSRSTSL Trigger: CAGGGAGGTGGAGCGGCTGCCGCTCCAGAGCCCGGAGCCCGGCAACACCCGGGACATGAGACCGCGGCGCAGCGGTACAGCGCCCGCCTG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162739.8 |
||
| CDS GCA 72 bp | GCTCCGGGCTCTGGAGCGGCAGCCGCTCCACCTCCCTaGAGCAGCGGCGAGAGCAGCCCGGACTCCGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: APGSGAAAAPPP*SSGESSPDSGG Trigger: CCCACCGGAGTCCGGGCTGCTCTCGCCGCTGCTGCAGGGAGGTGGAGCGGCTGCCGCTCCAGAGCCCGGAGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162739.8 |
||