Pregenerated sensors for IMPACT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024423Ensembl transcript IDs: ENSMUST00000025290.7, ENSMUST00000234035.2, ENSMUST00000234369.2, ENSMUST00000235053.2
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAACCTCAGACGCTGTCTATGTGTGCTCCAGCACTCTCCCAAGGCTaGCTCTTCCTCGGGAGGGGAATCAAACTAGTCTGCGATCCGTTG | + |
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Preference number: 1 (lower is better) Translates to: QPQTLSMCAPALSQG*LFLGRGIKLVCDPL Trigger: CAACGGATCGCAGACTAGTTTGATTCCCCTCCCGAGGAAGAGGCAGCCTTGGGAGAGTGCTGGAGCACACATAGACAGCGTCTGAGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR GCA 90 bp | GACAGACACCTCACTAGCAGCTTCTGCTCTGCCCGTCTACGTGGATaGCATTTGCTCATAGATACTGGCATGTGGAGAACATGTCAACTA | + |
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Preference number: 1 (lower is better) Translates to: DRHLTSSFCSARLRG*HLLIDTGMWRTCQL Trigger: TAGTTGACATGTTCTCCACATGCCAGTATCTATGAGCAAATGGCATCCACGTAGACGGGCAGAGCAGAAGCTGCTAGTGAGGTGTCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR GCA 90 bp | CTCTCCCAAGGCTGCCTCTTCCTCGGGAGGGGAATCAAACTAGTCTaGGATCCGTTGATCAATTTAGTCATTGTTGGCATTATTTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: LSQGCLFLGRGIKLV*DPLINLVIVGIISE Trigger: TTCAGAAATAATGCCAACAATGACTAAATTGATCAACGGATCGCAGACTAGTTTGATTCCCCTCCCGAGGAAGAGGCAGCCTTGGGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR TCA 90 bp | TATCACTCCATGATGAATACTATGGAAGGAAGCGTGACTCACTTGTaGAATCACAAGAGAAAGACTCCCCAAGACCTCCGTCTTCCATGC | + |
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Preference number: 1 (lower is better) Translates to: YHSMMNTMEGSVTHL*NHKRKTPQDLRLPC Trigger: GCATGGAAGACGGAGGTCTTGGGGAGTCTTTCTCTTGTGATTTCACAAGTGAGTCACGCTTCCTTCCATAGTATTCATCATGGAGTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR TCA 90 bp | ATTTATGGTCATCTCTTTAGTGGACTGGATGTGATTACAATTCACTaGAGTGATTACAGTATCACTCACCTGCCCTGTAAACAGTATCTG | + |
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Preference number: 1 (lower is better) Translates to: IYGHLFSGLDVITIH*SDYSITHLPCKQYL Trigger: CAGATACTGTTTACAGGGCAGGTGAGTGATACTGTAATCACTTCAGTGAATTGTAATCACATCCAGTCCACTAAAGAGATGACCATAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR TCA 90 bp | AAACTGTATACACCATTTATGGTCATCTCTTTAGTGGACTGGATGTaGTTACAATTCACTGAAGTGATTACAGTATCACTCACCTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: KLYTPFMVISLVDWM*LQFTEVITVSLTCP Trigger: AGGGCAGGTGAGTGATACTGTAATCACTTCAGTGAATTGTAATCACATCCAGTCCACTAAAGAGATGACCATAAATGGTGTATACAGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR GCA 90 bp | AGTGCTTCCTTCCAACAGCCTGTCTCTGACAGACACCTCACTAGCAGCTTCTGCGCACTCTCCCAAGGCTaGCTCTTCCTCGGGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: SASFQQPVSDRHLTSSFCALSQG*LFLGRG Trigger: TCCCCTCCCGAGGAAGAGGCAGCCTTGGGAGAGTGC...GCAGAAGCTGCTAGTGAGGTGTCTGTCAGAGACAGGCTGTTGGAAGGAAGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR GCA 90 bp | ATTTCAGGAGTTAGAAGTGAGGAACTGGGGTCTCCCCTCCCACCTGCAGCGAAGGACCTCCGTCTTCCATaGGCCCCCACTCTGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: ISGVRSEELGSPLPPAAKDLRLP*APTLKA Trigger: TGCTTTCAGAGTGGGGGCGCATGGAAGACGGAGGTC...CTTCGCTGCAGGTGGGAGGGGAGACCCCAGTTCCTCACTTCTAACTCCTGAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR GCA 90 bp | ATTTCAGGAGTTAGAAGTGAGGAACTGGGGTCTCCCCTCCCACCTGCAGCGAAGGCTCCTCTGGTGTCCTaGTGCCTCTATCTCGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: ISGVRSEELGSPLPPAAKAPLVS*CLYLVL Trigger: CAGAACGAGATAGAGGCAGCAGGACACCAGAGGAGC...CTTCGCTGCAGGTGGGAGGGGAGACCCCAGTTCCTCACTTCTAACTCCTGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR TCA 90 bp | ATTTCAGGAGTTAGAAGTGAGGAACTGGGGTCTCCCCTCCCACCTGCAGCGAAGATGAACTGGCTGACTTaGGCTGTCAGTGTGCTATCT | + |
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Preference number: 2 (lower is better) Translates to: ISGVRSEELGSPLPPAAKMNWLT*AVSVLS Trigger: AGATAGCACACTGACAGCTCAAGTCAGCCAGTTCAT...CTTCGCTGCAGGTGGGAGGGGAGACCCCAGTTCCTCACTTCTAACTCCTGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR GCA 90 bp | ACCTCAGACGCTGTCTATGTGTGCTCCAGCACTCTCCCAAGGCTGCCTCTTCCTGAGGAGGAAACACAATaGTGGTGGAACCATGATGAA | + |
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Preference number: 2 (lower is better) Translates to: TSDAVYVCSSTLPRLPLPEEETQ*WWNHDE Trigger: TTCATCATGGTTCCACCAGCATTGTGTTTCCTCCTC...AGGAAGAGGCAGCCTTGGGAGAGTGCTGGAGCACACATAGACAGCGTCTGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR CCA 90 bp | ACCTCAGACGCTGTCTATGTGTGCTCCAGCACTCTCCCAAGGCTGCCTCTTCCTCACTCTGAAAGCAACTaGGAGCTGAAAAAGCAATGC | + |
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Preference number: 2 (lower is better) Translates to: TSDAVYVCSSTLPRLPLPHSESN*ELKKQC Trigger: GCATTGCTTTTTCAGCTCCCAGTTGCTTTCAGAGTG...AGGAAGAGGCAGCCTTGGGAGAGTGCTGGAGCACACATAGACAGCGTCTGAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR TCA 90 bp | ACCTCAGACGCTGTCTATGTGTGCTCCAGCACTCTCCCAAGGCTGCCTCTTCCTAGCGTGACTCACTTGTaGAATCACAAGAGAAAGACT | + |
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Preference number: 2 (lower is better) Translates to: TSDAVYVCSSTLPRLPLPSVTHL*NHKRKT Trigger: AGTCTTTCTCTTGTGATTTCACAAGTGAGTCACGCT...AGGAAGAGGCAGCCTTGGGAGAGTGCTGGAGCACACATAGACAGCGTCTGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR CCA 90 bp | ATTTCAGGAGTTAGAAGTGAGGAACTGGGGTCTCCCCTCCCACCTGCAGCGAAGGAAACACAATGCTGGTaGAACCATGATGAACTGGCT | + |
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Preference number: 2 (lower is better) Translates to: ISGVRSEELGSPLPPAAKETQCW*NHDELA Trigger: AGCCAGTTCATCATGGTTCCACCAGCATTGTGTTTC...CTTCGCTGCAGGTGGGAGGGGAGACCCCAGTTCCTCACTTCTAACTCCTGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR CCA 90 bp | GTTCAAATGGCAAATGTATATCAAACTGGTGCAGTGGGCAGCCTGCTCCTCTGGGCCTTTCTATTCCTCTaGAGACACGTCTTCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: VQMANVYQTGAVGSLLLWAFLFL*RHVFPA Trigger: GGCAGGGAAGACGTGTCTCCAGAGGAATAGAAAGGC...CCAGAGGAGCAGGCTGCCCACTGCACCAGTTTGATATACATTTGCCATTTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR CCA 90 bp | AGTGCTTCCTTCCAACAGCCTGTCTCTGACAGACACCTCACTAGCAGCTTCTGCTCTAGTTCTGGCAAATaGTGGAACCAGAGGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: SASFQQPVSDRHLTSSFCSSSGK*WNQRRK Trigger: TTTCCTCCTCTGGTTCCACCATTTGCCAGAACTAGA...GCAGAAGCTGCTAGTGAGGTGTCTGTCAGAGACAGGCTGTTGGAAGGAAGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR CCA 90 bp | AGTGCTTCCTTCCAACAGCCTGTCTCTGACAGACACCTCACTAGCAGCTTCTGCAAATGTATATCAAACTaGTGCAGTGGGCAGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SASFQQPVSDRHLTSSFCKCISN*CSGQPA Trigger: AGCAGGCTGCCCACTGCACCAGTTTGATATACATTT...GCAGAAGCTGCTAGTGAGGTGTCTGTCAGAGACAGGCTGTTGGAAGGAAGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR TCA 90 bp | TTGAGGTCCAATGTTTTAACTGGATTTTCCGGCGGGTGCTCTAGAATAGGGTCTAAAGAAACCTGGCCTTaGTCCCTGGGGCATAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LRSNVLTGFSGGCSRIGSKETWP*SLGHKG Trigger: CCCTTTATGCCCCAGGGATCAAGGCCAGGTTTCTTT...AGACCCTATTCTAGAGCACCCGCCGGAAAATCCAGTTAAAACATTGGACCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234369.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTCAGGAGTTAGAAGTGAGGAACTGGGGTCTCCCCTCCCACCTGCAGCGAAGCTTGAGCTGTCAGTGTaGTATCTTAATGTACTCATG | + |
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Preference number: 2 (lower is better) Translates to: ISGVRSEELGSPLPPAAKLELSV*YLNVLM Trigger: CATGAGTACATTAAGATAGCACACTGACAGCTCAAG...CTTCGCTGCAGGTGGGAGGGGAGACCCCAGTTCCTCACTTCTAACTCCTGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR CCA 90 bp | GTTCAAATGGCAAATGTATATCAAACTGGTGCAGTGGGCAGCCTGCTCCTCTGGAGTTCTGGCAAATGGTaGAACCAGAGGAGGAAACAC | + |
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Preference number: 2 (lower is better) Translates to: VQMANVYQTGAVGSLLLWSSGKW*NQRRKH Trigger: GTGTTTCCTCCTCTGGTTCCACCATTTGCCAGAACT...CCAGAGGAGCAGGCTGCCCACTGCACCAGTTTGATATACATTTGCCATTTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR TCA 90 bp | TTGAGGTCCAATGTTTTAACTGGATTTTCCGGCGGGTGCTCTAGAATAGGGTCTCTTCAGTTTTCTTCTTaGCATCTGGGTCTGGCTCGG | + |
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Preference number: 2 (lower is better) Translates to: LRSNVLTGFSGGCSRIGSLQFSS*HLGLAR Trigger: CCGAGCCAGACCCAGATGTCAAGAAGAAAACTGAAG...AGACCCTATTCTAGAGCACCCGCCGGAAAATCCAGTTAAAACATTGGACCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234369.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAGGTCCAATGTTTTAACTGGATTTTCCGGCGGGTGCTCTAGAATAGGGTCTTCTGGCTCGGTTATCTaGGATTTCTGTATCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: LRSNVLTGFSGGCSRIGSSGSVI*DFCIRA Trigger: TGCTCTGATACAGAAATCTCAGATAACCGAGCCAGA...AGACCCTATTCTAGAGCACCCGCCGGAAAATCCAGTTAAAACATTGGACCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234369.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGGTCCAATGTTTTAACTGGATTTTCCGGCGGGTGCTCTAGAATAGGGTCTTTTCTTCTTGACATCTaGGTCTGGCTCGGTTATCTG | + |
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Preference number: 2 (lower is better) Translates to: LRSNVLTGFSGGCSRIGSFLLDI*VWLGYL Trigger: CAGATAACCGAGCCAGACCCAGATGTCAAGAAGAAA...AGACCCTATTCTAGAGCACCCGCCGGAAAATCCAGTTAAAACATTGGACCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234369.2 |
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| 3UTR-3UTR CCA 90 bp | AATCAAACTAGTCTGCGATCCGTTGATCAATTTAGTCATTGTTGGCATTATTTCCGTGTCCACAGTGGCTaGGAAGTTAACCTCTCACAC | + |
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Preference number: 2 (lower is better) Translates to: NQTSLRSVDQFSHCWHYFRVHSG*EVNLSH Trigger: GTGTGAGAGGTTAACTTCCCAGCCACTGTGGACACG...GAAATAATGCCAACAATGACTAAATTGATCAACGGATCGCAGACTAGTTTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR CCA 90 bp | GATGAATACTATGGAAGGAAGCGTGACTCACTTGTGAAATCACAAGAGAAAGACGAGGAAACACAATGCTaGTGGAACCATGATGAACTG | + |
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Preference number: 2 (lower is better) Translates to: DEYYGRKRDSLVKSQEKDEETQC*WNHDEL Trigger: CAGTTCATCATGGTTCCACCAGCATTGTGTTTCCTC...GTCTTTCTCTTGTGATTTCACAAGTGAGTCACGCTTCCTTCCATAGTATTCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTACTGGATTCCTATTTAAAATACCAAGTGAGGATGTGGATCTTTCAAGCCTATCGCAAGACATGTaGCCTTTCTATTCCTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: LATGFLFKIPSEDVDLSSLSQDM*PFYSSG Trigger: TCCAGAGGAATAGAAAGGCCACATGTCTTGCGATAG...GCTTGAAAGATCCACATCCTCACTTGGTATTTTAAATAGGAATCCAGTAGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR GCA 90 bp | CTGGCTACTGGATTCCTATTTAAAATACCAAGTGAGGATGTGGATCTTTCAAGCGAGCTGAAAAAGCAATaGTCACTTAACAGCATGGCA | + |
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Preference number: 2 (lower is better) Translates to: LATGFLFKIPSEDVDLSSELKKQ*SLNSMA Trigger: TGCCATGCTGTTAAGTGAGCATTGCTTTTTCAGCTC...GCTTGAAAGATCCACATCCTCACTTGGTATTTTAAATAGGAATCCAGTAGCCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTACTGGATTCCTATTTAAAATACCAAGTGAGGATGTGGATCTTTCAAGCGCTCACTTAACAGCATaGCAATTTCTATCGCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: LATGFLFKIPSEDVDLSSAHLTA*QFLSQD Trigger: GTCTTGCGATAGAAATTGCCATGCTGTTAAGTGAGC...GCTTGAAAGATCCACATCCTCACTTGGTATTTTAAATAGGAATCCAGTAGCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR CCA 90 bp | TTACAATTCACTGAAGTGATTACAGTATCACTCACCTGCCCTGTAAACAGTATCTGGCCAGAGTTCAAATaGCAAATGTATATCAAACTG | + |
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Preference number: 2 (lower is better) Translates to: LQFTEVITVSLTCPVNSIWPEFK*QMYIKL Trigger: CAGTTTGATATACATTTGCCATTTGAACTCTGGCCA...GATACTGTTTACAGGGCAGGTGAGTGATACTGTAATCACTTCAGTGAATTGTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR CCA 90 bp | TTACAATTCACTGAAGTGATTACAGTATCACTCACCTGCCCTGTAAACAGTATCTGTAAACTATCACTTTaGCACATGATCACAGATGAA | + |
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Preference number: 2 (lower is better) Translates to: LQFTEVITVSLTCPVNSICKLSL*HMITDE Trigger: TTCATCTGTGATCATGTGCCAAAGTGATAGTTTACA...GATACTGTTTACAGGGCAGGTGAGTGATACTGTAATCACTTCAGTGAATTGTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR GCA 72 bp | ACGCTGTCTATGTGTGCTCCAGCACTCTCCCAAGGCTaGCTCTTCCTCGGGAGGGGAATCAAACTAGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: TLSMCAPALSQG*LFLGRGIKLVC Trigger: GCAGACTAGTTTGATTCCCCTCCCGAGGAAGAGGCAGCCTTGGGAGAGTGCTGGAGCACACATAGACAGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR CAA 90 bp | CTCTCCCAAGGCTGCCTCTTCCTCGGGAGGGGAATCAAACTAGTCTGCGATCCGGATGAACTGGCTGACTaGAGCTGTCAGTGTGCTATC | + |
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Preference number: 3 (lower is better) Translates to: LSQGCLFLGRGIKLVCDPDELAD*SCQCAI Trigger: GATAGCACACTGACAGCTCAAGTCAGCCAGTTCATC...CGGATCGCAGACTAGTTTGATTCCCCTCCCGAGGAAGAGGCAGCCTTGGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR CAA 90 bp | ACCTCAGACGCTGTCTATGTGTGCTCCAGCACTCTCCCAAGGCTGCCTCTTCCTCGTTCTGCAAGTGAGTaGACCAGAGCACAGGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: TSDAVYVCSSTLPRLPLPRSASE*TRAQGR Trigger: TCTTCCCTGTGCTCTGGTCAACTCACTTGCAGAACG...AGGAAGAGGCAGCCTTGGGAGAGTGCTGGAGCACACATAGACAGCGTCTGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR TCA 72 bp | CTCTGGTGTCCTGCTGCCTCTATCTCGTTCTGCAAGTaGGTTGACCAGAGCACAGGGAAGAGCACAGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: LWCPAASISFCK*VDQSTGKSTGK Trigger: CTTCCCTGTGCTCTTCCCTGTGCTCTGGTCAACTCACTTGCAGAACGAGATAGAGGCAGCAGGACACCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR GCA 72 bp | GGCCAGAGTTCAAATGGCAAATGTATATCAAACTGGTaGAGTGGGCAGCCTGCTCCTCTGGTGTCCTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: GQSSNGKCISNW*SGQPAPLVSCC Trigger: GCAGCAGGACACCAGAGGAGCAGGCTGCCCACTGCACCAGTTTGATATACATTTGCCATTTGAACTCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR CCA 72 bp | CCTCCGTCTTCCATGCGCCCCCACTCTGAAAGCAACTaGGAGCTGAAAAAGCAATGCTCACTTAACAGCATG | + |
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Preference number: 3 (lower is better) Translates to: PPSSMRPHSESN*ELKKQCSLNSM Trigger: CATGCTGTTAAGTGAGCATTGCTTTTTCAGCTCCCAGTTGCTTTCAGAGTGGGGGCGCATGGAAGACGGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR CCA 72 bp | TCTGGCCAGAGTTCAAATGGCAAATGTATATCAAACTaGTGCAGTGGGCAGCCTGCTCCTCTGGTGTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: SGQSSNGKCISN*CSGQPAPLVSC Trigger: GCAGGACACCAGAGGAGCAGGCTGCCCACTGCACCAGTTTGATATACATTTGCCATTTGAACTCTGGCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR GCA 72 bp | CTCACTAGCAGCTTCTGCTCTGCCCGTCTACGTGGATaGCATTTGCTCATAGATACTGGCATGTGGAGAACA | + |
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Preference number: 3 (lower is better) Translates to: LTSSFCSARLRG*HLLIDTGMWRT Trigger: TGTTCTCCACATGCCAGTATCTATGAGCAAATGGCATCCACGTAGACGGGCAGAGCAGAAGCTGCTAGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR CCA 72 bp | CAAATGGTGGAACCAGAGGAGGAAACACAATGCTGGTaGAACCATGATGAACTGGCTGACTTGAGCTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: QMVEPEEETQCW*NHDELADLSCQ Trigger: CTGACAGCTCAAGTCAGCCAGTTCATCATGGTTCCACCAGCATTGTGTTTCCTCCTCTGGTTCCACCATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR CCA 72 bp | TGGCAAATGGTGGAACCAGAGGAGGAAACACAATGCTaGTGGAACCATGATGAACTGGCTGACTTGAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: WQMVEPEEETQC*WNHDELADLSC Trigger: ACAGCTCAAGTCAGCCAGTTCATCATGGTTCCACCAGCATTGTGTTTCCTCCTCTGGTTCCACCATTTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR-3UTR CAA 90 bp | TTGAGGTCCAATGTTTTAACTGGATTTTCCGGCGGGTGCTCTAGAATAGGGTCTTCTTCAGTTTTCTTCTaGACATCTGGGTCTGGCTCG | + |
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Preference number: 3 (lower is better) Translates to: LRSNVLTGFSGGCSRIGSSSVFF*TSGSGS Trigger: CGAGCCAGACCCAGATGTCAAGAAGAAAACTGAAGA...AGACCCTATTCTAGAGCACCCGCCGGAAAATCCAGTTAAAACATTGGACCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234369.2 |
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| 3UTR GCA 72 bp | TTGAGGTCCAATGTTTTAACTGGATTTTCCGGCGGGTaGTCTAGAATAGGGTCTTCTTCGGACTCAACCTCA | + |
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Preference number: 3 (lower is better) Translates to: LRSNVLTGFSGG*SRIGSSSDSTS Trigger: TGAGGTTGAGTCCGAAGAAGACCCTATTCTAGAGCACCCGCCGGAAAATCCAGTTAAAACATTGGACCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234369.2 |
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| 3UTR GCA 72 bp | CCCCACTCTGAAAGCAACTGGGAGCTGAAAAAGCAATaGTCACTTAACAGCATGGCAATTTCTATCGCAAGA | + |
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Preference number: 3 (lower is better) Translates to: PHSESNWELKKQ*SLNSMAISIAR Trigger: TCTTGCGATAGAAATTGCCATGCTGTTAAGTGAGCATTGCTTTTTCAGCTCCCAGTTGCTTTCAGAGTGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR TCA 72 bp | ATGATGAATACTATGGAAGGAAGCGTGACTCACTTGTaGAATCACAAGAGAAAGACTCCCCAAGACCTCCGT | + |
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Preference number: 3 (lower is better) Translates to: MMNTMEGSVTHL*NHKRKTPQDLR Trigger: ACGGAGGTCTTGGGGAGTCTTTCTCTTGTGATTTCACAAGTGAGTCACGCTTCCTTCCATAGTATTCATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR GCA 72 bp | ATTACAGTATCACTCACCTGCCCTGTAAACAGTATCTaGTTTATCTGTCCTGTATCAGTGCTTCCTTCCAAC | + |
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Preference number: 3 (lower is better) Translates to: ITVSLTCPVNSI*FICPVSVLPSN Trigger: GTTGGAAGGAAGCACTGATACAGGACAGATAAAGCAGATACTGTTTACAGGGCAGGTGAGTGATACTGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR TCA 72 bp | CATCTCTTTAGTGGACTGGATGTGATTACAATTCACTaGAGTGATTACAGTATCACTCACCTGCCCTGTAAA | + |
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Preference number: 3 (lower is better) Translates to: HLFSGLDVITIH*SDYSITHLPCK Trigger: TTTACAGGGCAGGTGAGTGATACTGTAATCACTTCAGTGAATTGTAATCACATCCAGTCCACTAAAGAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR CCA 72 bp | CTACGTGGATGCCATTTGCTCATAGATACTGGCATGTaGAGAACATGTCAACTAATAAAATATAGAGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: LRGCHLLIDTGM*RTCQLIKYREG Trigger: GCCTTCTCTATATTTTATTAGTTGACATGTTCTCCACATGCCAGTATCTATGAGCAAATGGCATCCACGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR GCA 72 bp | TTACAATTCACTGAAGTGATTACAGTATCACTCACCTaGCCTGTAAACAGTATCTGCTTTATCTGTCCTGTA | + |
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Preference number: 3 (lower is better) Translates to: LQFTEVITVSLT*PVNSICFICPV Trigger: TACAGGACAGATAAAGCAGATACTGTTTACAGGGCAGGTGAGTGATACTGTAATCACTTCAGTGAATTGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR TCA 72 bp | TCCGTTGATCAATTTAGTCATTGTTGGCATTATTTCTaGAAGATAACAGGTACAGCTTACCTACACAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: SVDQFSHCWHYF*KITGTAYLHKG Trigger: CCCTTTGTGTAGGTAAGCTGTACCTGTTATCTTTCAGAAATAATGCCAACAATGACTAAATTGATCAACGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR TCA 72 bp | ACACCATTTATGGTCATCTCTTTAGTGGACTGGATGTaGTTACAATTCACTGAAGTGATTACAGTATCACTC | + |
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Preference number: 3 (lower is better) Translates to: TPFMVISLVDWM*LQFTEVITVSL Trigger: GAGTGATACTGTAATCACTTCAGTGAATTGTAATCACATCCAGTCCACTAAAGAGATGACCATAAATGGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR CCA 90 bp | ATTTCAGGAGTTAGAAGTGAGGAACTGGGGTCTCCCCTCCCACCTGCAGCGAAGTCTTCACTCTGCCTCTaGCTGTTCCCTACTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: ISGVRSEELGSPLPPAAKSSLCL*LFPTSS Trigger: AGAGGAAGTAGGGAACAGCCAGAGGCAGAGTGAAGA...CTTCGCTGCAGGTGGGAGGGGAGACCCCAGTTCCTCACTTCTAACTCCTGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR CCA 90 bp | CTCTCCCAAGGCTGCCTCTTCCTCGGGAGGGGAATCAAACTAGTCTGCGATCCGACTCCTCGCCATAAATaGCTGCCATTGCTTCGATTT | + |
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Preference number: 4 (lower is better) Translates to: LSQGCLFLGRGIKLVCDPTPRHK*LPLLRF Trigger: AAATCGAAGCAATGGCAGCCATTTATGGCGAGGAGT...CGGATCGCAGACTAGTTTGATTCCCCTCCCGAGGAAGAGGCAGCCTTGGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR CCA 90 bp | CTCTCCCAAGGCTGCCTCTTCCTCGGGAGGGGAATCAAACTAGTCTGCGATCCGCATAGATGTTGTGGGTaGCGCTGGCAATCTTCTTAT | + |
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Preference number: 4 (lower is better) Translates to: LSQGCLFLGRGIKLVCDPHRCCG*RWQSSY Trigger: ATAAGAAGATTGCCAGCGCCACCCACAACATCTATG...CGGATCGCAGACTAGTTTGATTCCCCTCCCGAGGAAGAGGCAGCCTTGGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR GCA 90 bp | ATTTCAGGAGTTAGAAGTGAGGAACTGGGGTCTCCCCTCCCACCTGCAGCGAAGTCGATTTCTTCACTCTaGCTCTGGCTGTTCCCTACT | + |
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Preference number: 4 (lower is better) Translates to: ISGVRSEELGSPLPPAAKSISSL*LWLFPT Trigger: AGTAGGGAACAGCCAGAGGCAGAGTGAAGAAATCGA...CTTCGCTGCAGGTGGGAGGGGAGACCCCAGTTCCTCACTTCTAACTCCTGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR TCA 90 bp | AGTGCTTCCTTCCAACAGCCTGTCTCTGACAGACACCTCACTAGCAGCTTCTGCTGGCATTTTCATCAATaGCACACCACTCCTCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SASFQQPVSDRHLTSSFCWHFHQ*HTTPRH Trigger: ATGGCGAGGAGTGGTGTGTCATTGATGAAAATGCCA...GCAGAAGCTGCTAGTGAGGTGTCTGTCAGAGACAGGCTGTTGGAAGGAAGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR CCA 90 bp | ACCTCAGACGCTGTCTATGTGTGCTCCAGCACTCTCCCAAGGCTGCCTCTTCCTCAATTCTTCAGTTTCTaGTTGAGTTTCTTCACTGAT | + |
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Preference number: 4 (lower is better) Translates to: TSDAVYVCSSTLPRLPLPQFFSF*LSFFTD Trigger: ATCAGTGAAGAAACTCAACCAGAAACTGAAGAATTG...AGGAAGAGGCAGCCTTGGGAGAGTGCTGGAGCACACATAGACAGCGTCTGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR TCA 90 bp | TTGAGGTCCAATGTTTTAACTGGATTTTCCGGCGGGTGCTCTAGAATAGGGTCTTGGCATTTTCATCAATaGCACACCACTCCTCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LRSNVLTGFSGGCSRIGSWHFHQ*HTTPRH Trigger: ATGGCGAGGAGTGGTGTGTCATTGATGAAAATGCCA...AGACCCTATTCTAGAGCACCCGCCGGAAAATCCAGTTAAAACATTGGACCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234369.2 |
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| CDS-3UTR CCA 90 bp | GTTCAAATGGCAAATGTATATCAAACTGGTGCAGTGGGCAGCCTGCTCCTCTGGTATTCTCGTACAGCTTaGCAAGAACCAGTTTCACCT | + |
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Preference number: 4 (lower is better) Translates to: VQMANVYQTGAVGSLLLWYSRTA*QEPVSP Trigger: AGGTGAAACTGGTTCTTGCCAAGCTGTACGAGAATA...CCAGAGGAGCAGGCTGCCCACTGCACCAGTTTGATATACATTTGCCATTTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR TCA 90 bp | CTGGCTACTGGATTCCTATTTAAAATACCAAGTGAGGATGTGGATCTTTCAAGCCATTCAAAATCTCCATaGGGTGAAGAAGGCGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LATGFLFKIPSEDVDLSSHSKSP*GEEGGP Trigger: GGGGCCGCCTTCTTCACCTCATGGAGATTTTGAATG...GCTTGAAAGATCCACATCCTCACTTGGTATTTTAAATAGGAATCCAGTAGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR TCA 90 bp | GTTCAAATGGCAAATGTATATCAAACTGGTGCAGTGGGCAGCCTGCTCCTCTGGTCTTCAGTTTCTGGTTaGGTTTCTTCACTGATTTTG | + |
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Preference number: 4 (lower is better) Translates to: VQMANVYQTGAVGSLLLWSSVSG*VSSLIL Trigger: CAAAATCAGTGAAGAAACTCAACCAGAAACTGAAGA...CCAGAGGAGCAGGCTGCCCACTGCACCAGTTTGATATACATTTGCCATTTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR GCA 90 bp | CTGTCAGTGTGCTATCTTAATGTACTCATGACCACTGGGAACGTGTCCACAGTGATAAATGGCTGCCATTaGTTCGATTTCTTCACTCTG | + |
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Preference number: 4 (lower is better) Translates to: LSVCYLNVLMTTGNVSTVINGCH*FDFFTL Trigger: CAGAGTGAAGAAATCGAAGCAATGGCAGCCATTTAT...CACTGTGGACACGTTCCCAGTGGTCATGAGTACATTAAGATAGCACACTGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR CCA 90 bp | GATGAATACTATGGAAGGAAGCGTGACTCACTTGTGAAATCACAAGAGAAAGACGTCCAATGTTTTAACTaGATTTTCCGGCGGGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: DEYYGRKRDSLVKSQEKDVQCFN*IFRRVL Trigger: GAGCACCCGCCGGAAAATCCAGTTAAAACATTGGAC...GTCTTTCTCTTGTGATTTCACAAGTGAGTCACGCTTCCTTCCATAGTATTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR GCA 90 bp | CTGGCTACTGGATTCCTATTTAAAATACCAAGTGAGGATGTGGATCTTTCAAGCCTCGCCATAAATGGCTaGCATTGCTTCGATTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LATGFLFKIPSEDVDLSSLAING*HCFDFF Trigger: GAAGAAATCGAAGCAATGGCAGCCATTTATGGCGAG...GCTTGAAAGATCCACATCCTCACTTGGTATTTTAAATAGGAATCCAGTAGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| 3UTR CAA 72 bp | TTCCTCGGGAGGGGAATCAAACTAGTCTGCGATCCGTaGATCAATTTAGTCATTGTTGGCATTATTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: FLGRGIKLVCDP*INLVIVGIISE Trigger: TTCAGAAATAATGCCAACAATGACTAAATTGATCAACGGATCGCAGACTAGTTTGATTCCCCTCCCGAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR TCA 90 bp | AATCAAACTAGTCTGCGATCCGTTGATCAATTTAGTCATTGTTGGCATTATTTCCTTCAGTTTTCTTCTTaGCATCTGGGTCTGGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: NQTSLRSVDQFSHCWHYFLQFSS*HLGLAR Trigger: CCGAGCCAGACCCAGATGTCAAGAAGAAAACTGAAG...GAAATAATGCCAACAATGACTAAATTGATCAACGGATCGCAGACTAGTTTGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR TCA 90 bp | AATCAAACTAGTCTGCGATCCGTTGATCAATTTAGTCATTGTTGGCATTATTTCCGTCAGGAGTGTTCGTaGAGTTCTTCTCCACCAGAA | + |
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Preference number: 4 (lower is better) Translates to: NQTSLRSVDQFSHCWHYFRQECS*SSSPPE Trigger: TTCTGGTGGAGAAGAACTTCACGAACACTCCTGACG...GAAATAATGCCAACAATGACTAAATTGATCAACGGATCGCAGACTAGTTTGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR CCA 90 bp | GATGAATACTATGGAAGGAAGCGTGACTCACTTGTGAAATCACAAGAGAAAGACGATTCACCCATGTTGTaGACATATATCTCCTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: DEYYGRKRDSLVKSQEKDDSPML*TYISSR Trigger: CCTTGAGGAGATATATGTCCACAACATGGGTGAATC...GTCTTTCTCTTGTGATTTCACAAGTGAGTCACGCTTCCTTCCATAGTATTCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR CCA 90 bp | TGTCACTTCCTAGTATTATATGAAATGGTAAGTAAGCTCACAGCTGTTCTTCCATTTCTTCTTGACATCTaGGTCTGGCTCGGTTATCTG | + |
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Preference number: 4 (lower is better) Translates to: CHFLVLYEMVSKLTAVLPFLLDI*VWLGYL Trigger: CAGATAACCGAGCCAGACCCAGATGTCAAGAAGAAA...TGGAAGAACAGCTGTGAGCTTACTTACCATTTCATATAATACTAGGAAGTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR TCA 90 bp | AATCAAACTAGTCTGCGATCCGTTGATCAATTTAGTCATTGTTGGCATTATTTCTCTGGCTCGGTTATCTaGGATTTCTGTATCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: NQTSLRSVDQFSHCWHYFSGSVI*DFCIRA Trigger: TGCTCTGATACAGAAATCTCAGATAACCGAGCCAGA...GAAATAATGCCAACAATGACTAAATTGATCAACGGATCGCAGACTAGTTTGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR CAA 90 bp | ACCTCAGACGCTGTCTATGTGTGCTCCAGCACTCTCCCAAGGCTGCCTCTTCCTTTCCTGGCACAGTTGTaGATGTGTTTGAAACGGTCA | + |
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Preference number: 5 (lower is better) Translates to: TSDAVYVCSSTLPRLPLPFLAQL*MCLKRS Trigger: TGACCGTTTCAAACACATCAACAACTGTGCCAGGAA...AGGAAGAGGCAGCCTTGGGAGAGTGCTGGAGCACACATAGACAGCGTCTGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS CCA 90 bp | CTGAAAAGTGCTCCTTCGGTCAGTAATAGGAACGCCATGAGCAACTaGAGGCAATTCTTCAGTTTCTGGTTGAGTTTCTTCACTGATTTT | + |
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Preference number: 5 (lower is better) Translates to: LKSAPSVSNRNAMSN*RQFFSFWLSFFTDF Trigger: AAAATCAGTGAAGAAACTCAACCAGAAACTGAAGAATTGCCTCCAGTTGCTCATGGCGTTCCTATTACTGACCGAAGGAGCACTTTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025290.7 ENSMUST00000234035.2 ENSMUST00000235053.2 |
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| CDS-3UTR CAA 90 bp | TGTCACTTCCTAGTATTATATGAAATGGTAAGTAAGCTCACAGCTGTTCTTCCATCTTCAGTTTTCTTCTaGACATCTGGGTCTGGCTCG | + |
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Preference number: 5 (lower is better) Translates to: CHFLVLYEMVSKLTAVLPSSVFF*TSGSGS Trigger: CGAGCCAGACCCAGATGTCAAGAAGAAAACTGAAGA...TGGAAGAACAGCTGTGAGCTTACTTACCATTTCATATAATACTAGGAAGTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR CAA 90 bp | GATGAATACTATGGAAGGAAGCGTGACTCACTTGTGAAATCACAAGAGAAAGACATAGATTCACCCATGTaGTGGACATATATCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: DEYYGRKRDSLVKSQEKDIDSPM*WTYISS Trigger: TGAGGAGATATATGTCCACAACATGGGTGAATCTAT...GTCTTTCTCTTGTGATTTCACAAGTGAGTCACGCTTCCTTCCATAGTATTCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS-3UTR CAA 90 bp | AATCAAACTAGTCTGCGATCCGTTGATCAATTTAGTCATTGTTGGCATTATTTCCATAAATGGCTGCCATaGCTTCGATTTCTTCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: NQTSLRSVDQFSHCWHYFHKWLP*LRFLHS Trigger: AGAGTGAAGAAATCGAAGCAATGGCAGCCATTTATG...GAAATAATGCCAACAATGACTAAATTGATCAACGGATCGCAGACTAGTTTGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS CAA 90 bp | GGAGTGTTCGTGAAGTTCTTCTCCACCAGAATGTTCCTGGCACAGTaGTTGATGTGTTTGAAACGGTCAGGTCCCAGCAGGATCCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GVFVKFFSTRMFLAQ*LMCLKRSGPSRIPP Trigger: TGGAGGGATCCTGCTGGGACCTGACCGTTTCAAACACATCAACAACTGTGCCAGGAACATTCTGGTGGAGAAGAACTTCACGAACACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025290.7 |
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| CDS CCA 72 bp | GCTCCTTCGGTCAGTAATAGGAACGCCATGAGCAACTaGAGGCAATTCTTCAGTTTCTGGTTGAGTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: APSVSNRNAMSN*RQFFSFWLSFF Trigger: GAAGAAACTCAACCAGAAACTGAAGAATTGCCTCCAGTTGCTCATGGCGTTCCTATTACTGACCGAAGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025290.7 ENSMUST00000234035.2 ENSMUST00000235053.2 |
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| CDS CCA 72 bp | AACGCCATGAGCAACTGGAGGCAATTCTTCAGTTTCTaGTTGAGTTTCTTCACTGATTTTGAGGTCCAATGT | + |
|
Preference number: 6 (lower is better) Translates to: NAMSNWRQFFSF*LSFFTDFEVQC Trigger: ACATTGGACCTCAAAATCAGTGAAGAAACTCAACCAGAAACTGAAGAATTGCCTCCAGTTGCTCATGGCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025290.7 ENSMUST00000234035.2 ENSMUST00000235053.2 |
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| CDS CAA 72 bp | GCCATGAGCAACTGGAGGCAATTCTTCAGTTTCTGGTaGAGTTTCTTCACTGATTTTGAGGTCCAATGTTTT | + |
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Preference number: 6 (lower is better) Translates to: AMSNWRQFFSFW*SFFTDFEVQCF Trigger: AAAACATTGGACCTCAAAATCAGTGAAGAAACTCAACCAGAAACTGAAGAATTGCCTCCAGTTGCTCATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025290.7 ENSMUST00000234035.2 ENSMUST00000235053.2 |
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