Pregenerated sensors for IMPA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024525Ensembl transcript IDs: ENSMUST00000025403.8
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGAACGTCATAGTGCCAGGCATGGCAGCACATGTCCGTCATCCCTaGGGCGGGAGGTGGAGGCTGGAGGACCAGGAGGTCAAGGCCCTT | + |
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Preference number: 1 (lower is better) Translates to: ENVIVPGMAAHVRHP*GGRWRLEDQEVKAL Trigger: AAGGGCCTTGACCTCCTGGTCCTCCAGCCTCCACCTCCCGCCGCAGGGATGACGGACATGTGCTGCCATGCCTGGCACTATGACGTTCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR CCA 90 bp | CTTGCCAGCGAGCCCCAGAGATCCTCCCGATGCCCATCTCCAGTGTaGCATCGCAAAGCAGGTCCTCACGCCTGCAGGCGGAAACTTACC | + |
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Preference number: 1 (lower is better) Translates to: LASEPQRSSRCPSPV*HRKAGPHACRRKLT Trigger: GGTAAGTTTCCGCCTGCAGGCGTGAGGACCTGCTTTGCGATGCCACACTGGAGATGGGCATCGGGAGGATCTCTGGGGCTCGCTGGCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR CCA 90 bp | CGGCGGGAGGTGGAGGCTGGAGGACCAGGAGGTCAAGGCCCTTCTTaGCTACACAGAAAGTTCCAGGCCAGCCTGGGATTCAAGAAATCC | + |
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Preference number: 1 (lower is better) Translates to: RREVEAGGPGGQGPS*LHRKFQASLGFKKS Trigger: GGATTTCTTGAATCCCAGGCTGGCCTGGAACTTTCTGTGTAGCCAAGAAGGGCCTTGACCTCCTGGTCCTCCAGCCTCCACCTCCCGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR CCA 90 bp | CTAAGCACCGAGGCAAGGCCCAGGGAGAGCTATGGTAGACTGTCCTaGAACTTAAGCCACCGGGACAGCTCTTTCCCAGGTTGCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: LSTEARPRESYGRLS*NLSHRDSSFPGCCC Trigger: GCAGCAGCAACCTGGGAAAGAGCTGTCCCGGTGGCTTAAGTTCCAGGACAGTCTACCATAGCTCTCCCTGGGCCTTGCCTCGGTGCTTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR CCA 90 bp | GTTCTTTGCCACCAAACGCAACAGCCACTTCACCGAAGCAGGAGCTaGTCACTGACACAGCACACCCCAGTGACAACGGAACTACAGGGG | + |
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Preference number: 1 (lower is better) Translates to: VLCHQTQQPLHRSRS*SLTQHTPVTTELQG Trigger: CCCCTGTAGTTCCGTTGTCACTGGGGTGTGCTGTGTCAGTGACCAGCTCCTGCTTCGGTGAAGTGGCTGTTGCGTTTGGTGGCAAAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR CCA 90 bp | GGCACAGAAGGGAAGTGCTGTCTCTTTCCCCTCCGACAGCAACCGTaGTGTGCCAGGTGTAGAACTGACCAGGTTCAAGAGATGGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: GTEGKCCLFPLRQQP*CARCRTDQVQEMEK Trigger: TTTTTCCATCTCTTGAACCTGGTCAGTTCTACACCTGGCACACCACGGTTGCTGTCGGAGGGGAAAGAGACAGCACTTCCCTTCTGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR GCA 90 bp | TGGGAGGTGGTTTTCACAGTGCCTGTCCTTCCTGGAAGTCTGTGTTaGTGCACACACTTCTCCAGGTACCTACTGGAGCACCGTTTAATC | + |
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Preference number: 1 (lower is better) Translates to: WEVVFTVPVLPGSLC*CTHFSRYLLEHRLI Trigger: GATTAAACGGTGCTCCAGTAGGTACCTGGAGAAGTGTGTGCAGCAACACAGACTTCCAGGAAGGACAGGCACTGTGAAAACCACCTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR TCA 90 bp | CTGAGCATAGACGACCAGTGGGGTAATAGCAGTAACAGCCTTGCCTaGGAACCAGAGGCTGGAGGAAGACCCAAAGCAGACCACTATAAT | + |
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Preference number: 1 (lower is better) Translates to: LSIDDQWGNSSNSLA*EPEAGGRPKADHYN Trigger: ATTATAGTGGTCTGCTTTGGGTCTTCCTCCAGCCTCTGGTTCTCAGGCAAGGCTGTTACTGCTATTACCCCACTGGTCGTCTATGCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR CCA 90 bp | AAGTTAGAGGACAGTGTGTGGAAGTTCACCAGAATTCGGAAGGGATaGACTCGCCGACCACCTGACAAGATGGAGGCTGTTTGGAACAGA | + |
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Preference number: 1 (lower is better) Translates to: KLEDSVWKFTRIRKG*TRRPPDKMEAVWNR Trigger: TCTGTTCCAAACAGCCTCCATCTTGTCAGGTGGTCGGCGAGTCCATCCCTTCCGAATTCTGGTGAACTTCCACACACTGTCCTCTAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR CCA 90 bp | CTAGTGGCTTCCCTGAGGATACAAACCAGAGCACAAACCCATACCTaGCTGACCCCCTGCTATGGATGGCAGGGCGTTTATTATTTGGTT | + |
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Preference number: 1 (lower is better) Translates to: LVASLRIQTRAQTHT*LTPCYGWQGVYYLV Trigger: AACCAAATAATAAACGCCCTGCCATCCATAGCAGGGGGTCAGCCAGGTATGGGTTTGTGCTCTGGTTTGTATCCTCAGGGAAGCCACTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR CCA 90 bp | ACTAAACACAAAGCAAGACAGCAAATCCCCCTGACGCTATGCATTTaGTGGCTTTCCTGTGATGCCCAGGGATGTCCCTCGAGAGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: TKHKARQQIPLTLCI*WLSCDAQGCPSRVL Trigger: CAGAACTCTCGAGGGACATCCCTGGGCATCACAGGAAAGCCACCAAATGCATAGCGTCAGGGGGATTTGCTGTCTTGCTTTGTGTTTAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR TCA 90 bp | CTGACCCCCTGCTATGGATGGCAGGGCGTTTATTATTTGGTTAATTaGGAAAGGCAGGTAGGTCTCCATGGCAGTGGTTCTCAACCTTCC | + |
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Preference number: 1 (lower is better) Translates to: LTPCYGWQGVYYLVN*ERQVGLHGSGSQPS Trigger: GGAAGGTTGAGAACCACTGCCATGGAGACCTACCTGCCTTTCTCAATTAACCAAATAATAAACGCCCTGCCATCCATAGCAGGGGGTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR TCA 90 bp | TTCATGGATAATCGGATAATTGGGAAAGTGATTAGTGGGGCTGGCTaGATTGGGAAGCCTGGGAGAGAAAGGGCTGAAGCAGCCAGGACA | + |
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Preference number: 1 (lower is better) Translates to: FMDNRIIGKVISGAG*IGKPGRERAEAART Trigger: TGTCCTGGCTGCTTCAGCCCTTTCTCTCCCAGGCTTCCCAATTCAGCCAGCCCCACTAATCACTTTCCCAATTATCCGATTATCCATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR GCA 90 bp | AAAGGAGCGGCAACCCACAGGGTTGAGAATCACAGCTCTATAGGATaGTACCGCAAAGCTGTTGTGATAGAGAGGGAAGTTAGAGGACAG | + |
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Preference number: 1 (lower is better) Translates to: KGAATHRVENHSSIG*YRKAVVIEREVRGQ Trigger: CTGTCCTCTAACTTCCCTCTCTATCACAACAGCTTTGCGGTAGCATCCTATAGAGCTGTGATTCTCAACCCTGTGGGTTGCCGCTCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR CCA 90 bp | AAACACAAAGCAAGACAGCAAATCCCCCTGACGCTATGCATTTGGTaGCTTTCCTGTGATGCCCAGGGATGTCCCTCGAGAGTTCTGATA | + |
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Preference number: 1 (lower is better) Translates to: KHKARQQIPLTLCIW*LSCDAQGCPSRVLI Trigger: TATCAGAACTCTCGAGGGACATCCCTGGGCATCACAGGAAAGCCACCAAATGCATAGCGTCAGGGGGATTTGCTGTCTTGCTTTGTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR TCA 90 bp | ATTCTGATTTATTGCATTCCGTCTTACCACGGTCAGGGGAGGGCCTaGGAGCCCGTTCTAAAGCTGTATCACCTGAGATTTGCATTCTGG | + |
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Preference number: 1 (lower is better) Translates to: ILIYCIPSYHGQGRA*EPVLKLYHLRFAFW Trigger: CCAGAATGCAAATCTCAGGTGATACAGCTTTAGAACGGGCTCTCAGGCCCTCCCCTGACCGTGGTAAGACGGAATGCAATAAATCAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR TCA 90 bp | GTGCCAGGTGTAGAACTGACCAGGTTCAAGAGATGGAAAAAGCCCTaGGGCCTTGTTAGTACAGATATTTCAGAACCACCTGGGCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: VPGVELTRFKRWKKP*GLVSTDISEPPGPC Trigger: ACAAGGCCCAGGTGGTTCTGAAATATCTGTACTAACAAGGCCTCAGGGCTTTTTCCATCTCTTGAACCTGGTCAGTTCTACACCTGGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR GCA 90 bp | AAATTCACTAAACACAAAGCAAGACAGCAAATCCCCCTGACGCTATaGATTTGGTGGCTTTCCTGTGATGCCCAGGGATGTCCCTCGAGA | + |
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Preference number: 1 (lower is better) Translates to: KFTKHKARQQIPLTL*IWWLSCDAQGCPSR Trigger: TCTCGAGGGACATCCCTGGGCATCACAGGAAAGCCACCAAATGCATAGCGTCAGGGGGATTTGCTGTCTTGCTTTGTGTTTAGTGAATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR CCA 90 bp | GAGGTCAAGGCCCTTCTTGGCTACACAGAAAGTTCCAGGCCAGCCTaGGATTCAAGAAATCCCTTCTCAAAGAAACAAAACCCTCACGTA | + |
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Preference number: 1 (lower is better) Translates to: EVKALLGYTESSRPA*DSRNPFSKKQNPHV Trigger: TACGTGAGGGTTTTGTTTCTTTGAGAAGGGATTTCTTGAATCCCAGGCTGGCCTGGAACTTTCTGTGTAGCCAAGAAGGGCCTTGACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR TCA 90 bp | CATCTTATTGATTCACTGGCTCTGAAGGATTCGGGCTACAGACGTTaGTCTTTTGACTACCCTGTGTGTGTACATGGGGGTCAGAGGATG | + |
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Preference number: 1 (lower is better) Translates to: HLIDSLALKDSGYRR*SFDYPVCVHGGQRM Trigger: CATCCTCTGACCCCCATGTACACACACAGGGTAGTCAAAAGATCAACGTCTGTAGCCCGAATCCTTCAGAGCCAGTGAATCAATAAGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR TCA 90 bp | CTGTATCACCTGAGATTTGCATTCTGGAAAAACAATCAGGATGGATaGCTAACACACCCCTCACAAGATCTGGGTTTGGCTCTGATGAAA | + |
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Preference number: 1 (lower is better) Translates to: LYHLRFAFWKNNQDG*LTHPSQDLGLALMK Trigger: TTTCATCAGAGCCAAACCCAGATCTTGTGAGGGGTGTGTTAGTCATCCATCCTGATTGTTTTTCCAGAATGCAAATCTCAGGTGATACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR GCA 90 bp | GAAAGGCAGGTAGGTCTCCATGGCAGTGGTTCTCAACCTTCCCAATaGTGTGACCCTTTAATACCATTCCTCATGTTGACTATAAAATTA | + |
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Preference number: 1 (lower is better) Translates to: ERQVGLHGSGSQPSQ*CDPLIPFLMLTIKL Trigger: TAATTTTATAGTCAACATGAGGAATGGTATTAAAGGGTCACAGCATTGGGAAGGTTGAGAACCACTGCCATGGAGACCTACCTGCCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR CCA 90 bp | GAACTACAGGGGAGAATTTGTACAGGACACCGCACTGTAGCTGTTTaGAGAATGTTGGAGATAAATTCACTAAACACAAAGCAAGACAGC | + |
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Preference number: 1 (lower is better) Translates to: ELQGRICTGHRTVAV*RMLEINSLNTKQDS Trigger: GCTGTCTTGCTTTGTGTTTAGTGAATTTATCTCCAACATTCTCCAAACAGCTACAGTGCGGTGTCCTGTACAAATTCTCCCCTGTAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR TCA 90 bp | GCAGGTAGGTCTCCATGGCAGTGGTTCTCAACCTTCCCAATGCTGTaGCCCTTTAATACCATTCCTCATGTTGACTATAAAATTATTTTT | + |
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Preference number: 1 (lower is better) Translates to: AGRSPWQWFSTFPML*PFNTIPHVDYKIIF Trigger: AAAAATAATTTTATAGTCAACATGAGGAATGGTATTAAAGGGTCACAGCATTGGGAAGGTTGAGAACCACTGCCATGGAGACCTACCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGAAGGGAAGTGCTGTCTCTTTCCCCTCCGACAGCAACCGTGGTGTGCCAGGGTCAGGGGAGGGCCTaGGAGCCCGTTCTAAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: HRREVLSLSPPTATVVCQGQGRA*EPVLKL Trigger: CAGCTTTAGAACGGGCTCTCAGGCCCTCCCCTGACC...CTGGCACACCACGGTTGCTGTCGGAGGGGAAAGAGACAGCACTTCCCTTCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR CAA 90 bp | GCGGCGGGAGGTGGAGGCTGGAGGACCAGGAGGTCAAGGCCCTTCTaGGCTACACAGAAAGTTCCAGGCCAGCCTGGGATTCAAGAAATC | + |
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Preference number: 2 (lower is better) Translates to: AAGGGGWRTRRSRPF*ATQKVPGQPGIQEI Trigger: GATTTCTTGAATCCCAGGCTGGCCTGGAACTTTCTGTGTAGCCAAGAAGGGCCTTGACCTCCTGGTCCTCCAGCCTCCACCTCCCGCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGGAGGCTGGAGGACCAGGAGGTCAAGGCCCTTCTTGGCTACACAGAAAGTTGTCTGCAGTCACCTaGCACAACAGTCTAGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: EVEAGGPGGQGPSWLHRKLSAVT*HNSLGP Trigger: GGGGCCTAGACTGTTGTGCCAGGTGACTGCAGACAA...CTTTCTGTGTAGCCAAGAAGGGCCTTGACCTCCTGGTCCTCCAGCCTCCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGGAGGCTGGAGGACCAGGAGGTCAAGGCCCTTCTTGGCTACACAGAAAGTGGATGAGAGCTTTGTaGTTTGCCAGGGCCGCCACA | + |
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Preference number: 2 (lower is better) Translates to: EVEAGGPGGQGPSWLHRKWMRAL*FARAAT Trigger: TGTGGCGGCCCTGGCAAACCACAAAGCTCTCATCCA...CTTTCTGTGTAGCCAAGAAGGGCCTTGACCTCCTGGTCCTCCAGCCTCCACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGAAGGGAAGTGCTGTCTCTTTCCCCTCCGACAGCAACCGTGGTGTGCCAGTCCATCTACTCTGCATaGGAGCCTGAGTTCTACCCC | + |
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Preference number: 2 (lower is better) Translates to: HRREVLSLSPPTATVVCQSIYSA*EPEFYP Trigger: GGGGTAGAACTCAGGCTCTCATGCAGAGTAGATGGA...CTGGCACACCACGGTTGCTGTCGGAGGGGAAAGAGACAGCACTTCCCTTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR GCA 90 bp | CACAGAAGGGAAGTGCTGTCTCTTTCCCCTCCGACAGCAACCGTGGTGTGCCAGTTCCCAGGTTGCTGCTaGGTTTTTAGCCTTCGAGCT | + |
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Preference number: 2 (lower is better) Translates to: HRREVLSLSPPTATVVCQFPGCC*VFSLRA Trigger: AGCTCGAAGGCTAAAAACGCAGCAGCAACCTGGGAA...CTGGCACACCACGGTTGCTGTCGGAGGGGAAAGAGACAGCACTTCCCTTCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR GCA 90 bp | CCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAAGCATCCAACATGTCCGTCATCCCTaGGGCGGGAGGTGGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: PTGAPFNLPIELPLPSIQHVRHP*GGRWRL Trigger: CAGCCTCCACCTCCCGCCGCAGGGATGACGGACATG...TTGGATGCTTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR GCA 90 bp | CACAGAAGGGAAGTGCTGTCTCTTTCCCCTCCGACAGCAACCGTGGTGTGCCAGAGCTCTTTCCCAGGTTaGTGCTGCGTTTTTAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: HRREVLSLSPPTATVVCQSSFPG*CCVFSL Trigger: AAGGCTAAAAACGCAGCAGCAACCTGGGAAAGAGCT...CTGGCACACCACGGTTGCTGTCGGAGGGGAAAGAGACAGCACTTCCCTTCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCACAGTGCCTGTCCTTCCTGGAAGTCTGTGTTGCTGCACACACTTCTCCAGATGGGGGTCAGAGGATaGCACTGGGAGTCTCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: FHSACPSWKSVLLHTLLQMGVRG*HWESPS Trigger: TGAGGGAGACTCCCAGTGCCATCCTCTGACCCCCAT...CTGGAGAAGTGTGTGCAGCAACACAGACTTCCAGGAAGGACAGGCACTGTGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR CAA 90 bp | GAGGCTGGAGGAAGACCCAAAGCAGACCACTATAATTCTGATTTATaGCATTCCGTCTTACCACGGTCAGGGGAGGGCCTGAGAGCCCGT | + |
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Preference number: 2 (lower is better) Translates to: EAGGRPKADHYNSDL*HSVLPRSGEGLRAR Trigger: ACGGGCTCTCAGGCCCTCCCCTGACCGTGGTAAGACGGAATGCAATAAATCAGAATTATAGTGGTCTGCTTTGGGTCTTCCTCCAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCAAGCATCCAACAGTGTAAGCTCAGGGGTTAAACTGCATCCTCTCACACAGGGCACAGAAGGGAAGTaGTGTCTCTTTCCCCTCCGA | + |
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Preference number: 2 (lower is better) Translates to: SQASNSVSSGVKLHPLTQGTEGK*CLFPLR Trigger: TCGGAGGGGAAAGAGACAGCACTTCCCTTCTGTGCC...CTGTGTGAGAGGATGCAGTTTAACCCCTGAGCTTACACTGTTGGATGCTTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTGTCCTTCCTGGAAGTCTGTGTTGCTGCACACACTTCTCCAGGTACCTACTGGTCAAGGCCCTTCTTaGCTACACAGAAAGTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: ACPSWKSVLLHTLLQVPTGQGPS*LHRKFQ Trigger: CTGGAACTTTCTGTGTAGCCAAGAAGGGCCTTGACC...AGTAGGTACCTGGAGAAGTGTGTGCAGCAACACAGACTTCCAGGAAGGACAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCACAGTGCCTGTCCTTCCTGGAAGTCTGTGTTGCTGCACACACTTCTCCAGGCAGGTAGGTCTCCATaGCAGTGGTTCTCAACCTTC | + |
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Preference number: 2 (lower is better) Translates to: FHSACPSWKSVLLHTLLQAGRSP*QWFSTF Trigger: GAAGGTTGAGAACCACTGCCATGGAGACCTACCTGC...CTGGAGAAGTGTGTGCAGCAACACAGACTTCCAGGAAGGACAGGCACTGTGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGTACCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAAAGTAACAGCCTTGCCTaGGAACCAGAGGCTGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: SRYLLEHRLICLLNFHSQSNSLA*EPEAGG Trigger: TCCTCCAGCCTCTGGTTCTCAGGCAAGGCTGTTACT...TTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGGTACCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR TCA 90 bp | CCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAAGCATCCAAGGCAACCCACAGGGTTaGGAATCACAGCTCTATAGG | + |
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Preference number: 2 (lower is better) Translates to: PTGAPFNLPIELPLPSIQGNPQG*ESQLYR Trigger: CCTATAGAGCTGTGATTCTCAACCCTGTGGGTTGCC...TTGGATGCTTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGTAAGCTCAGGGGTTAAACTGCATCCTCTCACACAGCTCTGCCCATCTTATGATACACGTACTCCCTaGAGGTCAACTGAAGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: SVSSGVKLHPLTQLCPSYDTRTP*RSTEGS Trigger: ACTGCCTTCAGTTGACCTTCAGGGAGTACGTGTATC...ATAAGATGGGCAGAGCTGTGTGAGAGGATGCAGTTTAACCCCTGAGCTTACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCACAGTGCCTGTCCTTCCTGGAAGTCTGTGTTGCTGCACACACTTCTCCAGAGATGGAAAAAGCCCTaGGGCCTTGTTAGTACAGAT | + |
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Preference number: 2 (lower is better) Translates to: FHSACPSWKSVLLHTLLQRWKKP*GLVSTD Trigger: ATCTGTACTAACAAGGCCTCAGGGCTTTTTCCATCT...CTGGAGAAGTGTGTGCAGCAACACAGACTTCCAGGAAGGACAGGCACTGTGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGTACCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAAAATGTTGTTTCCATCTaGGGAGAGGCACAGGCACCA | + |
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Preference number: 2 (lower is better) Translates to: SRYLLEHRLICLLNFHSQNVVSI*GEAQAP Trigger: TGGTGCCTGTGCCTCTCCTCAGATGGAAACAACATT...TTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGGTACCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTCAGTGACACACCCCTTAAAAACAGTTCCACTGAGAACCAGGCATAGAACTGCTCAGGGGTTAAACTaGATCCTCTCACACAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: PSVTHPLKTVPLRTRHRTAQGLN*ILSHSS Trigger: AGAGCTGTGTGAGAGGATGCAGTTTAACCCCTGAGC...AGTTCTATGCCTGGTTCTCAGTGGAACTGTTTTTAAGGGGTGTGTCACTGAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR CCA 90 bp | CCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAAGCATCCAATATGGTAGACTGTCCTaGAACTTAAGCCACCGGGAC | + |
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Preference number: 2 (lower is better) Translates to: PTGAPFNLPIELPLPSIQYGRLS*NLSHRD Trigger: GTCCCGGTGGCTTAAGTTCCAGGACAGTCTACCATA...TTGGATGCTTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTCAGTGACACACCCCTTAAAAACAGTTCCACTGAGAACCAGGCATAGAACTTATTTCAGAACCACCTaGGCCTTGTCTGCAGTCACC | + |
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Preference number: 2 (lower is better) Translates to: PSVTHPLKTVPLRTRHRTYFRTT*ALSAVT Trigger: GGTGACTGCAGACAAGGCCCAGGTGGTTCTGAAATA...AGTTCTATGCCTGGTTCTCAGTGGAACTGTTTTTAAGGGGTGTGTCACTGAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTGTCCTTCCTGGAAGTCTGTGTTGCTGCACACACTTCTCCAGGTACCTACTCAAAACCCTCACGTATaGAAAACTGCTACCAGAATG | + |
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Preference number: 2 (lower is better) Translates to: ACPSWKSVLLHTLLQVPTQNPHV*KTATRM Trigger: CATTCTGGTAGCAGTTTTCCATACGTGAGGGTTTTG...AGTAGGTACCTGGAGAAGTGTGTGCAGCAACACAGACTTCCAGGAAGGACAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| 3UTR-3UTR TCA 90 bp | CCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAAGCATCCAACTCTGCCCATCTTATTaGTTCACTGGCTCTGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PTGAPFNLPIELPLPSIQLCPSY*FTGSEG Trigger: TCCTTCAGAGCCAGTGAATCAATAAGATGGGCAGAG...TTGGATGCTTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTGTAAGCTCAGGGGTTAAACTGCATCCTCTCACACAGCTCTGCCCATCTTATGACCACCTGACAAGATaGAGGCTGTTTGGAACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SVSSGVKLHPLTQLCPSYDHLTR*RLFGTE Trigger: TTCTGTTCCAAACAGCCTCCATCTTGTCAGGTGGTC...ATAAGATGGGCAGAGCTGTGTGAGAGGATGCAGTTTAACCCCTGAGCTTACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAAGCATCCAAACCCCCTGCTATGGATaGCAGGGCGTTTATTATTTG | + |
|
Preference number: 2 (lower is better) Translates to: PTGAPFNLPIELPLPSIQTPCYG*QGVYYL Trigger: CAAATAATAAACGCCCTGCCATCCATAGCAGGGGGT...TTGGATGCTTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CCA 90 bp | AGACAGCAACAGGCCATGGCTTTGATAAAATGTGACAGACTGATGTCACTGTTCGCCCCCAGCTTAACTTaGAACCAAAATTCTGGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: RQQQAMALIKCDRLMSLFAPSLT*NQNSGP Trigger: GGGACCAGAATTTTGGTTCCAAGTTAAGCTGGGGGC...GAACAGTGACATCAGTCTGTCACATTTTATCAAAGCCATGGCCTGTTGCTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGGTACCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAAAATCTGTCTAAGCTGTaGAGCAGCCCAACAAGACAT | + |
|
Preference number: 2 (lower is better) Translates to: SRYLLEHRLICLLNFHSQNLSKL*SSPTRH Trigger: ATGTCTTGTTGGGCTGCTCCACAGCTTAGACAGATT...TTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGGTACCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCCAAGCATCCAACAGTGTAAGCTCAGGGGTTAAACTGCATCCTCTCACACAGTCATTGCAGAGTCTCTaGGTAATTTCTTGTGTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SQASNSVSSGVKLHPLTQSLQSL*VISCVA Trigger: AGCTACACAAGAAATTACTCAGAGACTCTGCAATGA...CTGTGTGAGAGGATGCAGTTTAACCCCTGAGCTTACACTGTTGGATGCTTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTGTAAGCTCAGGGGTTAAACTGCATCCTCTCACACAGCTCTGCCCATCTTATAGAAAAGGGTTCAAATaGAGGCCTACTGGGGTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SVSSGVKLHPLTQLCPSYRKGFK*RPTGVN Trigger: ATTTACCCCAGTAGGCCTGCATTTGAACCCTTTTCT...ATAAGATGGGCAGAGCTGTGTGAGAGGATGCAGTTTAACCCCTGAGCTTACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGGTACCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAATTGGAACCAAAATTCTaGTCCCTAGTGCTGGGATAT | + |
|
Preference number: 2 (lower is better) Translates to: SRYLLEHRLICLLNFHSQLEPKF*SLVLGY Trigger: ATATCCCAGCACTAGGGACCAGAATTTTGGTTCCAA...TTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGGTACCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CCA 90 bp | AATTTCTTGTGTAGCTACGTATATGTGAGGTGCTGTTTTGAGTGTGTTCTGAGACTCCGACAGCAACCGTaGTGTGCCAGGTGTAGAACT | + |
|
Preference number: 2 (lower is better) Translates to: NFLCSYVYVRCCFECVLRLRQQP*CARCRT Trigger: AGTTCTACACCTGGCACACCACGGTTGCTGTCGGAG...TCTCAGAACACACTCAAAACAGCACCTCACATATACGTAGCTACACAAGAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CCA 90 bp | AGACAGCAACAGGCCATGGCTTTGATAAAATGTGACAGACTGATGTCACTGTTCCAAATGCAGGCCTACTaGGGTAAATCAGAGAACGTC | + |
|
Preference number: 2 (lower is better) Translates to: RQQQAMALIKCDRLMSLFQMQAY*GKSENV Trigger: GACGTTCTCTGATTTACCCCAGTAGGCCTGCATTTG...GAACAGTGACATCAGTCTGTCACATTTTATCAAAGCCATGGCCTGTTGCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CAA 90 bp | GGGAGAATTTGTACAGGACACCGCACTGTAGCTGTTTGGAGAATGTaGGAGATAAATTCACTAAACACAAAGCAAGACAGCAAATCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: GRICTGHRTVAVWRM*EINSLNTKQDSKSP Trigger: GGGGGATTTGCTGTCTTGCTTTGTGTTTAGTGAATTTATCTCCAACATTCTCCAAACAGCTACAGTGCGGTGTCCTGTACAAATTCTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGGTACCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAATCAGAATGGCTTAGCTaGTTTCCGAAGTATTCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: SRYLLEHRLICLLNFHSQSEWLS*FPKYSV Trigger: TACTGAATACTTCGGAAAGCAGCTAAGCCATTCTGA...TTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGGTACCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CCA 90 bp | AGACAGCAACAGGCCATGGCTTTGATAAAATGTGACAGACTGATGTCACTGTTCGCTCTCTACTTCTCTTaGAGTAGTGCAGACATAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RQQQAMALIKCDRLMSLFALYFS*SSADIA Trigger: AGCTATGTCTGCACTACTCCAAGAGAAGTAGAGAGC...GAACAGTGACATCAGTCTGTCACATTTTATCAAAGCCATGGCCTGTTGCTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CCA 90 bp | AGACAGCAACAGGCCATGGCTTTGATAAAATGTGACAGACTGATGTCACTGTTCTTAGAGGACAGTGTGTaGAAGTTCACCAGAATTCGG | + |
|
Preference number: 2 (lower is better) Translates to: RQQQAMALIKCDRLMSLFLEDSV*KFTRIR Trigger: CCGAATTCTGGTGAACTTCCACACACTGTCCTCTAA...GAACAGTGACATCAGTCTGTCACATTTTATCAAAGCCATGGCCTGTTGCTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CAA 90 bp | GGAACTACAGGGGAGAATTTGTACAGGACACCGCACTGTAGCTGTTaGGAGAATGTTGGAGATAAATTCACTAAACACAAAGCAAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: GTTGENLYRTPHCSC*ENVGDKFTKHKARQ Trigger: CTGTCTTGCTTTGTGTTTAGTGAATTTATCTCCAACATTCTCCAAACAGCTACAGTGCGGTGTCCTGTACAAATTCTCCCCTGTAGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGGTACCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAACCTTTAATATTAAGGTaGGGCAATCTATTGAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: SRYLLEHRLICLLNFHSQPLILR*GNLLSH Trigger: ATGGCTCAATAGATTGCCTCACCTTAATATTAAAGG...TTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGGTACCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCTCAGTGACACACCCCTTAAAAACAGTTCCACTGAGAACCAGGCATAGAACTCTGAGATTTGCATTCTaGAAAAACAATCAGGATGGA | + |
|
Preference number: 2 (lower is better) Translates to: PSVTHPLKTVPLRTRHRTLRFAF*KNNQDG Trigger: TCCATCCTGATTGTTTTTCCAGAATGCAAATCTCAG...AGTTCTATGCCTGGTTCTCAGTGGAACTGTTTTTAAGGGGTGTGTCACTGAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCTCAGTGACACACCCCTTAAAAACAGTTCCACTGAGAACCAGGCATAGAACTGTATCACCTGAGATTTaGATTCTGGAAAAACAATCA | + |
|
Preference number: 2 (lower is better) Translates to: PSVTHPLKTVPLRTRHRTVSPEI*ILEKQS Trigger: TGATTGTTTTTCCAGAATGCAAATCTCAGGTGATAC...AGTTCTATGCCTGGTTCTCAGTGGAACTGTTTTTAAGGGGTGTGTCACTGAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAAGCATCCAAATAATTCTGATTTATTaGATTCCGTCTTACCACGGT | + |
|
Preference number: 2 (lower is better) Translates to: PTGAPFNLPIELPLPSIQIILIY*IPSYHG Trigger: ACCGTGGTAAGACGGAATGCAATAAATCAGAATTAT...TTGGATGCTTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CCA 90 bp | AATTTCTTGTGTAGCTACGTATATGTGAGGTGCTGTTTTGAGTGTGTTCTGAGAACAGCCATCTCAGAATaGCTTAGCTGCTTTCCGAAG | + |
|
Preference number: 2 (lower is better) Translates to: NFLCSYVYVRCCFECVLRTAISE*LSCFPK Trigger: CTTCGGAAAGCAGCTAAGCCATTCTGAGATGGCTGT...TCTCAGAACACACTCAAAACAGCACCTCACATATACGTAGCTACACAAGAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCTCAGTGACACACCCCTTAAAAACAGTTCCACTGAGAACCAGGCATAGAACTTTTATAGCTGTAACTTaGCTACTGTGGCAAATCATA | + |
|
Preference number: 2 (lower is better) Translates to: PSVTHPLKTVPLRTRHRTFIAVT*LLWQII Trigger: TATGATTTGCCACAGTAGCCAAGTTACAGCTATAAA...AGTTCTATGCCTGGTTCTCAGTGGAACTGTTTTTAAGGGGTGTGTCACTGAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAAGCATCCAAAGTGCAGAATGCAAATaGTTTTTCAATCTGTCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: PTGAPFNLPIELPLPSIQSAECK*FFNLSK Trigger: CTTAGACAGATTGAAAAACCATTTGCATTCTGCACT...TTGGATGCTTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CAA 90 bp | CTCCAGGAGATCTTCATAATCATTGCAGAGTCTCTGAGTAATTTCTaGTGTAGCTACGTATATGTGAGGTGCTGTTTTGAGTGTGTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LQEIFIIIAESLSNF*CSYVYVRCCFECVL Trigger: CAGAACACACTCAAAACAGCACCTCACATATACGTAGCTACACAAGAAATTACTCAGAGACTCTGCAATGATTATGAAGATCTCCTGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CCA 90 bp | AATTTCTTGTGTAGCTACGTATATGTGAGGTGCTGTTTTGAGTGTGTTCTGAGAGAGAAACGTATTTTCTaGCACAGAAGGGAAGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: NFLCSYVYVRCCFECVLREKRIF*HRREVL Trigger: CAGCACTTCCCTTCTGTGCCAGAAAATACGTTTCTC...TCTCAGAACACACTCAAAACAGCACCTCACATATACGTAGCTACACAAGAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CCA 72 bp | CACATGTCCGTCATCCCTGCGGCGGGAGGTGGAGGCTaGAGGACCAGGAGGTCAAGGCCCTTCTTGGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: HMSVIPAAGGGG*RTRRSRPFLAT Trigger: TGTAGCCAAGAAGGGCCTTGACCTCCTGGTCCTCCAGCCTCCACCTCCCGCCGCAGGGATGACGGACATGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CCA 72 bp | GGGCAAACAAGCAAGGGTCCCTGCCTGGCCCAACCTTaGGGCTTCCCCGTTCCCCAGCGCTCTCTACTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GQTSKGPCLAQP*GFPVPQRSLLL Trigger: GAGAAGTAGAGAGCGCTGGGGAACGGGGAAGCCCCAAGGTTGGGCCAGGCAGGGACCCTTGCTTGTTTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCACATGTCCGTCATCCCTGCGGCGGGAGGTGGAGGCTGGAGGACCAGGAGGTGGCCCCCAGCTTAACTaGGAACCAAAATTCTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: STCPSSLRREVEAGGPGGGPQLN*EPKFWS Trigger: GGACCAGAATTTTGGTTCCAAGTTAAGCTGGGGGCC...ACCTCCTGGTCCTCCAGCCTCCACCTCCCGCCGCAGGGATGACGGACATGTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR GCA 72 bp | TCTCCAGTGTGGCATCGCAAAGCAGGTCCTCACGCCTaGAGGCGGAAACTTACCAACCGAGCCAGCCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: SPVWHRKAGPHA*RRKLTNRASHL Trigger: GAGGTGGCTGGCTCGGTTGGTAAGTTTCCGCCTGCAGGCGTGAGGACCTGCTTTGCGATGCCACACTGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR TCA 72 bp | CCGACCAGCTCTGTTCCTGGCAGGTCTTTCGGGGAATaGGTGAATGGGCAAACAAGCAAGGGTCCCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PTSSVPGRSFGE*VNGQTSKGPCL Trigger: CAGGCAGGGACCCTTGCTTGTTTGCCCATTCACTCATTCCCCGAAAGACCTGCCAGGAACAGAGCTGGTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CCA 72 bp | GAGGCAAGGCCCAGGGAGAGCTATGGTAGACTGTCCTaGAACTTAAGCCACCGGGACAGCTCTTTCCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: EARPRESYGRLS*NLSHRDSSFPG Trigger: ACCTGGGAAAGAGCTGTCCCGGTGGCTTAAGTTCCAGGACAGTCTACCATAGCTCTCCCTGGGCCTTGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CCA 72 bp | CTCTGTTCCTGGCAGGTCTTTCGGGGAATGAGTGAATaGGCAAACAAGCAAGGGTCCCTGCCTGGCCCAACC | + |
|
Preference number: 3 (lower is better) Translates to: LCSWQVFRGMSE*ANKQGSLPGPT Trigger: GGTTGGGCCAGGCAGGGACCCTTGCTTGTTTGCCCATTCACTCATTCCCCGAAAGACCTGCCAGGAACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CCA 72 bp | CACCAAACGCAACAGCCACTTCACCGAAGCAGGAGCTaGTCACTGACACAGCACACCCCAGTGACAACGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HQTQQPLHRSRS*SLTQHTPVTTE Trigger: TTCCGTTGTCACTGGGGTGTGCTGTGTCAGTGACCAGCTCCTGCTTCGGTGAAGTGGCTGTTGCGTTTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR GCA 72 bp | GACAAGAAGCCCCGATCTGGGAGGTGGTTTTCACAGTaGCTGTCCTTCCTGGAAGTCTGTGTTGCTGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: DKKPRSGRWFSQ*LSFLEVCVAAH Trigger: GTGTGCAGCAACACAGACTTCCAGGAAGGACAGGCACTGTGAAAACCACCTCCCAGATCGGGGCTTCTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR GCA 72 bp | TTCACAGTGCCTGTCCTTCCTGGAAGTCTGTGTTGCTaGACACACTTCTCCAGGTACCTACTGGAGCACCGT | + |
|
Preference number: 3 (lower is better) Translates to: FTVPVLPGSLCC*THFSRYLLEHR Trigger: ACGGTGCTCCAGTAGGTACCTGGAGAAGTGTGTGCAGCAACACAGACTTCCAGGAAGGACAGGCACTGTGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CCA 72 bp | ACCCTGTGTGTGTACATGGGGGTCAGAGGATGGCACTaGGAGTCTCCCTCAGTCACTCTCCACCTTATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: TLCVYMGVRGWH*ESPSVTLHLIF Trigger: GAAAATAAGGTGGAGAGTGACTGAGGGAGACTCCCAGTGCCATCCTCTGACCCCCATGTACACACACAGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR GCA 72 bp | TTAGTACAGATATTTCAGAACCACCTGGGCCTTGTCTaGAGTCACCTGGCACAACAGTCTAGGCCCCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LVQIFQNHLGLV*SHLAQQSRPPA Trigger: AGCTGGGGGCCTAGACTGTTGTGCCAGGTGACTGCAGACAAGGCCCAGGTGGTTCTGAAATATCTGTACTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR GCA 72 bp | GTTTTCACAGTGCCTGTCCTTCCTGGAAGTCTGTGTTaGTGCACACACTTCTCCAGGTACCTACTGGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: VFTVPVLPGSLC*CTHFSRYLLEH Trigger: GTGCTCCAGTAGGTACCTGGAGAAGTGTGTGCAGCAACACAGACTTCCAGGAAGGACAGGCACTGTGAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CCA 72 bp | TATTTCAGAACCACCTGGGCCTTGTCTGCAGTCACCTaGCACAACAGTCTAGGCCCCCAGCTTAACTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: YFRTTWALSAVT*HNSLGPQLNLE Trigger: TTCCAAGTTAAGCTGGGGGCCTAGACTGTTGTGCCAGGTGACTGCAGACAAGGCCCAGGTGGTTCTGAAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CCA 72 bp | GATCTGGGAGGTGGTTTTCACAGTGCCTGTCCTTCCTaGAAGTCTGTGTTGCTGCACACACTTCTCCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: DLGGGFHSACPS*KSVLLHTLLQV Trigger: TACCTGGAGAAGTGTGTGCAGCAACACAGACTTCCAGGAAGGACAGGCACTGTGAAAACCACCTCCCAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR TCA 72 bp | TATTGCATTCCGTCTTACCACGGTCAGGGGAGGGCCTaGGAGCCCGTTCTAAAGCTGTATCACCTGAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: YCIPSYHGQGRA*EPVLKLYHLRF Trigger: AAATCTCAGGTGATACAGCTTTAGAACGGGCTCTCAGGCCCTCCCCTGACCGTGGTAAGACGGAATGCAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR TCA 72 bp | TGGGAGTCTCCCTCAGTCACTCTCCACCTTATTTTCTaGGTCAGTCTCTCCCTGAATCTGAAGGTCACCAGT | + |
|
Preference number: 3 (lower is better) Translates to: WESPSVTLHLIF*VSLSLNLKVTS Trigger: ACTGGTGACCTTCAGATTCAGGGAGAGACTGACTCAGAAAATAAGGTGGAGAGTGACTGAGGGAGACTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR TCA 72 bp | GATTCACTGGCTCTGAAGGATTCGGGCTACAGACGTTaGTCTTTTGACTACCCTGTGTGTGTACATGGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: DSLALKDSGYRR*SFDYPVCVHGG Trigger: ACCCCCATGTACACACACAGGGTAGTCAAAAGATCAACGTCTGTAGCCCGAATCCTTCAGAGCCAGTGAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR TCA 72 bp | AAACTGCATCCTCTCACACAGCTCTGCCCATCTTATTaGTTCACTGGCTCTGAAGGATTCGGGCTACAGACG | + |
|
Preference number: 3 (lower is better) Translates to: KLHPLTQLCPSY*FTGSEGFGLQT Trigger: CGTCTGTAGCCCGAATCCTTCAGAGCCAGTGAATCAATAAGATGGGCAGAGCTGTGTGAGAGGATGCAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR TCA 72 bp | AATCGGATAATTGGGAAAGTGATTAGTGGGGCTGGCTaGATTGGGAAGCCTGGGAGAGAAAGGGCTGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: NRIIGKVISGAG*IGKPGRERAEA Trigger: TGCTTCAGCCCTTTCTCTCCCAGGCTTCCCAATTCAGCCAGCCCCACTAATCACTTTCCCAATTATCCGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR GCA 72 bp | GATCCCACGAAGATAATGGATGAGAGCTTTGTGGTTTaGCAGGGCCGCCACAGAGAAAGGGTATTCGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: DPTKIMDESFVV*QGRHRERVFDK Trigger: TTTGTCGAATACCCTTTCTCTGTGGCGGCCCTGGCAAACCACAAAGCTCTCATCCATTATCTTCGTGGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CCA 72 bp | CAGGCGGAAACTTACCAACCGAGCCAGCCACCTCCCTaGACCCTGCTTACACTTTTAAACATTTGCTCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: QAETYQPSQPPP*TLLTLLNICSN Trigger: ATTAGAGCAAATGTTTAAAAGTGTAAGCAGGGTCCAGGGAGGTGGCTGGCTCGGTTGGTAAGTTTCCGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR TCA 72 bp | TGTTTCCATCTGAGGAGAGGCACAGGCACCAAATTCTaGGCTATACCAAGAACCCGGAGTGCAGAATGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: CFHLRRGTGTKF*AIPRTRSAECK Trigger: TTTGCATTCTGCACTCCGGGTTCTTGGTATAGCTCAGAATTTGGTGCCTGTGCCTCTCCTCAGATGGAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR GCA 72 bp | GCAACCCACAGGGTTGAGAATCACAGCTCTATAGGATaGTACCGCAAAGCTGTTGTGATAGAGAGGGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ATHRVENHSSIG*YRKAVVIEREV Trigger: AACTTCCCTCTCTATCACAACAGCTTTGCGGTAGCATCCTATAGAGCTGTGATTCTCAACCCTGTGGGTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CCA 72 bp | AGTCTAGGCCCCCAGCTTAACTTGGAACCAAAATTCTaGTCCCTAGTGCTGGGATATAGCTCAGTGGTACAA | + |
|
Preference number: 3 (lower is better) Translates to: SLGPQLNLEPKF*SLVLGYSSVVQ Trigger: TTGTACCACTGAGCTATATCCCAGCACTAGGGACCAGAATTTTGGTTCCAAGTTAAGCTGGGGGCCTAGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTAAGCTCAGGGGTTAAACTGCATCCTCTCACACAGCTCTGCCCATCTTATCAACAGGCCATGGCTTaGATAAAATGTGACAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: SVSSGVKLHPLTQLCPSYQQAMA*IKCDRL Trigger: CAGTCTGTCACATTTTATCAAAGCCATGGCCTGTTG...ATAAGATGGGCAGAGCTGTGTGAGAGGATGCAGTTTAACCCCTGAGCTTACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR TCA 72 bp | AATTCACTAAACACAAAGCAAGACAGCAAATCCCCCTaGCGCTATGCATTTGGTGGCTTTCCTGTGATGCCC | + |
|
Preference number: 3 (lower is better) Translates to: NSLNTKQDSKSP*RYAFGGFPVMP Trigger: GGGCATCACAGGAAAGCCACCAAATGCATAGCGTCAGGGGGATTTGCTGTCTTGCTTTGTGTTTAGTGAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR GCA 72 bp | GTAGGTCTCCATGGCAGTGGTTCTCAACCTTCCCAATaGTGTGACCCTTTAATACCATTCCTCATGTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: VGLHGSGSQPSQ*CDPLIPFLMLT Trigger: AGTCAACATGAGGAATGGTATTAAAGGGTCACAGCATTGGGAAGGTTGAGAACCACTGCCATGGAGACCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAAGCATCCAATCACAAGATCTGGGTTaGGCTCTGATGAAAAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: PTGAPFNLPIELPLPSIQSQDLG*ALMKRT Trigger: TGTTCTTTTCATCAGAGCCAAACCCAGATCTTGTGA...TTGGATGCTTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR TCA 72 bp | GACAAGACAGCAACAGGCCATGGCTTTGATAAAATGTaGCAGACTGATGTCACTGTTCTTTGCCACCAAACG | + |
|
Preference number: 3 (lower is better) Translates to: DKTATGHGFDKM*QTDVTVLCHQT Trigger: CGTTTGGTGGCAAAGAACAGTGACATCAGTCTGTCACATTTTATCAAAGCCATGGCCTGTTGCTGTCTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR TCA 72 bp | CTGAGATTTGCATTCTGGAAAAACAATCAGGATGGATaGCTAACACACCCCTCACAAGATCTGGGTTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LRFAFWKNNQDG*LTHPSQDLGLA Trigger: AGCCAAACCCAGATCTTGTGAGGGGTGTGTTAGTCATCCATCCTGATTGTTTTTCCAGAATGCAAATCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR TCA 72 bp | GTAGAACTGACCAGGTTCAAGAGATGGAAAAAGCCCTaGGGCCTTGTTAGTACAGATATTTCAGAACCACCT | + |
|
Preference number: 3 (lower is better) Translates to: VELTRFKRWKKP*GLVSTDISEPP Trigger: AGGTGGTTCTGAAATATCTGTACTAACAAGGCCTCAGGGCTTTTTCCATCTCTTGAACCTGGTCAGTTCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CCA 72 bp | AGAAATCCCTTCTCAAAGAAACAAAACCCTCACGTATaGAAAACTGCTACCAGAATGACTCGCAGGCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: RNPFSKKQNPHV*KTATRMTRRHG Trigger: TCCATGCCTGCGAGTCATTCTGGTAGCAGTTTTCCATACGTGAGGGTTTTGTTTCTTTGAGAAGGGATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR TCA 72 bp | TCTCCATGGCAGTGGTTCTCAACCTTCCCAATGCTGTaGCCCTTTAATACCATTCCTCATGTTGACTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: SPWQWFSTFPML*PFNTIPHVDYK Trigger: TTTATAGTCAACATGAGGAATGGTATTAAAGGGTCACAGCATTGGGAAGGTTGAGAACCACTGCCATGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CCA 72 bp | GGGAGAATTTGTACAGGACACCGCACTGTAGCTGTTTaGAGAATGTTGGAGATAAATTCACTAAACACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GRICTGHRTVAV*RMLEINSLNTK Trigger: CTTTGTGTTTAGTGAATTTATCTCCAACATTCTCCAAACAGCTACAGTGCGGTGTCCTGTACAAATTCTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CCA 72 bp | GCAGAATGCAAATGGTTTTTCAATCTGTCTAAGCTGTaGAGCAGCCCAACAAGACATTTCTGGTTTCCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: AECKWFFNLSKL*SSPTRHFWFPL Trigger: TAAAGGAAACCAGAAATGTCTTGTTGGGCTGCTCCACAGCTTAGACAGATTGAAAAACCATTTGCATTCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CCA 72 bp | GCTACTGTGGCAAATCATAATATAAATGTTTTCCGATaGTCTCAGGTAACTCCTCTAAAAGGGTTGTTCGAC | + |
|
Preference number: 3 (lower is better) Translates to: ATVANHNINVFR*SQVTPLKGLFD Trigger: GTCGAACAACCCTTTTAGAGGAGTTACCTGAGACCATCGGAAAACATTTATATTATGATTTGCCACAGTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CAA 90 bp | AATTTCTTGTGTAGCTACGTATATGTGAGGTGCTGTTTTGAGTGTGTTCTGAGACCACTGTTTAAAAAGTaGCAACTCCTGAAAGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: NFLCSYVYVRCCFECVLRPLFKK*QLLKDF Trigger: AAAGTCTTTCAGGAGTTGCAACTTTTTAAACAGTGG...TCTCAGAACACACTCAAAACAGCACCTCACATATACGTAGCTACACAAGAAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR-3UTR CAA 90 bp | AACTCTCATAATTATTCACTCCAGGAGATCTTCATAATCATTGCAGAGTCTCTGTATAATTCTGATTTATaGCATTCCGTCTTACCACGG | + |
|
Preference number: 3 (lower is better) Translates to: NSHNYSLQEIFIIIAESLYNSDL*HSVLPR Trigger: CCGTGGTAAGACGGAATGCAATAAATCAGAATTATA...CAGAGACTCTGCAATGATTATGAAGATCTCCTGGAGTGAATAATTATGAGAGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR GCA 90 bp | CGCCTGCAGGCGGAAACTTACCAACCGAGCCAGCCACCTCCCTGGACCCTGCTTGCACGCAGCGCCAACTaGACGGCCACCTCGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLQAETYQPSQPPPWTLLARSAN*TATSKH Trigger: GTGCTTCGAGGTGGCCGTGCAGTTGGCGCTGCGTGC...AAGCAGGGTCCAGGGAGGTGGCTGGCTCGGTTGGTAAGTTTCCGCCTGCAGGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR GCA 90 bp | AGCACATGTCCGTCATCCCTGCGGCGGGAGGTGGAGGCTGGAGGACCAGGAGGTGATGACTGTGGCAGCTaGCAGGTCCCAGCAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: STCPSSLRREVEAGGPGGDDCGS*QVPAVK Trigger: CTTCACTGCTGGGACCTGGCAGCTGCCACAGTCATC...ACCTCCTGGTCCTCCAGCCTCCACCTCCCGCCGCAGGGATGACGGACATGTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR GCA 90 bp | CACAGAAGGGAAGTGCTGTCTCTTTCCCCTCCGACAGCAACCGTGGTGTGCCAGGAAGCCGCTGGCCATTaGAAAAGGCGCCTTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HRREVLSLSPPTATVVCQEAAGH*KRRLGP Trigger: GGGGCCAAGGCGCCTTTTGCAATGGCCAGCGGCTTC...CTGGCACACCACGGTTGCTGTCGGAGGGGAAAGAGACAGCACTTCCCTTCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR CCA 90 bp | CACAGAAGGGAAGTGCTGTCTCTTTCCCCTCCGACAGCAACCGTGGTGTGCCAGCGAGATCTGTCTCCCTaGAGACCTGAAGCCGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HRREVLSLSPPTATVVCQRDLSP*RPEAAG Trigger: GCCAGCGGCTTCAGGTCTCCAGGGAGACAGATCTCG...CTGGCACACCACGGTTGCTGTCGGAGGGGAAAGAGACAGCACTTCCCTTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CAA 72 bp | GGTGGAGGCTGGAGGACCAGGAGGTCAAGGCCCTTCTaGGCTACACAGAAAGTTCCAGGCCAGCCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: GGGWRTRRSRPF*ATQKVPGQPGI Trigger: AATCCCAGGCTGGCCTGGAACTTTCTGTGTAGCCAAGAAGGGCCTTGACCTCCTGGTCCTCCAGCCTCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR TCA 90 bp | CCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAAGCATCCAAAGGTCGGGCTGTGGGTaGGCACACACTTGGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PTGAPFNLPIELPLPSIQRSGCG*AHTWPR Trigger: CCGGGGCCAAGTGTGTGCTCACCCACAGCCCGACCT...TTGGATGCTTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGAGGCTGGAGGACCAGGAGGTCAAGGCCCTTCTTGGCTACACAGAAAGACAGCCGCTCCTCTGTaGAGTGGTGAATCACTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EVEAGGPGGQGPSWLHRKTAAPL*SGESLQ Trigger: TTGGAGTGATTCACCACTGCACAGAGGAGCGGCTGT...CTTTCTGTGTAGCCAAGAAGGGCCTTGACCTCCTGGTCCTCCAGCCTCCACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAAGCATCCAACAGTGTAAGCTCAGGGGTTAAACTGCATCCTCTCACACAGGGACCCCATGAGCCTTaGCGTGCAGCAGCCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQASNSVSSGVKLHPLTQGPHEP*RAAAAP Trigger: TGGAGCGGCTGCTGCACGCCAAGGCTCATGGGGTCC...CTGTGTGAGAGGATGCAGTTTAACCCCTGAGCTTACACTGTTGGATGCTTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTAAGCTCAGGGGTTAAACTGCATCCTCTCACACAGCTCTGCCCATCTTATCGTCGATGGGGTCGATaGTCCAGGTCGGGCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVSSGVKLHPLTQLCPSYRRWGR*SRSGCG Trigger: CCCACAGCCCGACCTGGATCATCGACCCCATCGACG...ATAAGATGGGCAGAGCTGTGTGAGAGGATGCAGTTTAACCCCTGAGCTTACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGAAACGTATTTTCTGGCACAGAAGGGAAGTGCTGTCTCTTTCCCCTCCGAGTCTCCCTGGAGACCTaGAGCCGCTGGCCATTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KRNVFSGTEGKCCLFPLRVSLET*SRWPLQ Trigger: TTGCAATGGCCAGCGGCTTCAGGTCTCCAGGGAGAC...TCGGAGGGGAAAGAGACAGCACTTCCCTTCTGTGCCAGAAAATACGTTTCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGTACCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAACGACTCTGCACGACATaGGGTCAAGGGGTCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRYLLEHRLICLLNFHSQRLCTT*GQGVHL Trigger: CAGGTGGACCCCTTGACCTCATGTCGTGCAGAGTCG...TTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGGTACCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCAGTGACACACCCCTTAAAAACAGTTCCACTGAGAACCAGGCATAGAACTGGGCCAAGGTGGAGCTaGCAATCACTCGGACCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSVTHPLKTVPLRTRHRTGPRWS*QSLGPH Trigger: ATGGGGTCCGAGTGATTGGCAGCTCCACCTTGGCCC...AGTTCTATGCCTGGTTCTCAGTGGAACTGTTTTTAAGGGGTGTGTCACTGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR GCA 90 bp | TTTCACAGTGCCTGTCCTTCCTGGAAGTCTGTGTTGCTGCACACACTTCTCCAGCTGAGCTATGAGCACTaGCATCTCTCTGGTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FHSACPSWKSVLLHTLLQLSYEH*HLSGAS Trigger: GCTGGCACCAGAGAGATGGCAGTGCTCATAGCTCAG...CTGGAGAAGTGTGTGCAGCAACACAGACTTCCAGGAAGGACAGGCACTGTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR CCA 90 bp | TTTCACAGTGCCTGTCCTTCCTGGAAGTCTGTGTTGCTGCACACACTTCTCCAGAACAGAGGGCCAAGGTaGAGCTGCCAATCACTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FHSACPSWKSVLLHTLLQNRGPR*SCQSLG Trigger: TCCGAGTGATTGGCAGCTCCACCTTGGCCCTCTGTT...CTGGAGAAGTGTGTGCAGCAACACAGACTTCCAGGAAGGACAGGCACTGTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CAA 72 bp | GGTTTTCACAGTGCCTGTCCTTCCTGGAAGTCTGTGTaGCTGCACACACTTCTCCAGGTACCTACTGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GFHSACPSWKSV*LHTLLQVPTGA Trigger: TGCTCCAGTAGGTACCTGGAGAAGTGTGTGCAGCAACACAGACTTCCAGGAAGGACAGGCACTGTGAAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR TCA 90 bp | AGACAGCAACAGGCCATGGCTTTGATAAAATGTGACAGACTGATGTCACTGTTCATCACTCGGACCCCATaGGCCTTGGCGTGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RQQQAMALIKCDRLMSLFITRTP*ALACSS Trigger: GCTGCTGCACGCCAAGGCTCATGGGGTCCGAGTGAT...GAACAGTGACATCAGTCTGTCACATTTTATCAAAGCCATGGCCTGTTGCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGAAACGTATTTTCTGGCACAGAAGGGAAGTGCTGTCTCTTTCCCCTCCGAGTAGGGCCTGAGCTATaGGCACTGCCATCTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRNVFSGTEGKCCLFPLRVGPEL*ALPSLW Trigger: CCAGAGAGATGGCAGTGCTCATAGCTCAGGCCCTAC...TCGGAGGGGAAAGAGACAGCACTTCCCTTCTGTGCCAGAAAATACGTTTCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCAGTGACACACCCCTTAAAAACAGTTCCACTGAGAACCAGGCATAGAACTCTGCCATCTCTCTGGTaGCAGCAGCTACGACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSVTHPLKTVPLRTRHRTLPSLW*QQLRLC Trigger: GCAGAGTCGTAGCTGCTGGCACCAGAGAGATGGCAG...AGTTCTATGCCTGGTTCTCAGTGGAACTGTTTTTAAGGGGTGTGTCACTGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTAAGCTCAGGGGTTAAACTGCATCCTCTCACACAGCTCTGCCCATCTTATACCTGTGCACAAAGTTaGAGGTGCCGTCGATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVSSGVKLHPLTQLCPSYTCAQS*RCRRWG Trigger: ACCCCATCGACGGCACCTGCAACTTTGTGCACAGGT...ATAAGATGGGCAGAGCTGTGTGAGAGGATGCAGTTTAACCCCTGAGCTTACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR GCA 90 bp | AATTTCTTGTGTAGCTACGTATATGTGAGGTGCTGTTTTGAGTGTGTTCTGAGACGCCTTGGCCCCTCCTaGCGGTGTACAGCCGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NFLCSYVYVRCCFECVLRRLGPS*RCTAAP Trigger: AGGAGCGGCTGTACACCGGCAGGAGGGGCCAAGGCG...TCTCAGAACACACTCAAAACAGCACCTCACATATACGTAGCTACACAAGAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CAA 72 bp | GTCACCTGGCACAACAGTCTAGGCCCCCAGCTTAACTaGGAACCAAAATTCTGGTCCCTAGTGCTGGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: VTWHNSLGPQLN*EPKFWSLVLGY Trigger: ATATCCCAGCACTAGGGACCAGAATTTTGGTTCCAAGTTAAGCTGGGGGCCTAGACTGTTGTGCCAGGTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CAA 72 bp | GCACACCCCAGTGACAACGGAACTACAGGGGAGAATTaGTACAGGACACCGCACTGTAGCTGTTTGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AHPSDNGTTGEN*YRTPHCSCLEN Trigger: ATTCTCCAAACAGCTACAGTGCGGTGTCCTGTACAAATTCTCCCCTGTAGTTCCGTTGTCACTGGGGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTAAGCTCAGGGGTTAAACTGCATCCTCTCACACAGCTCTGCCCATCTTATTATCGGGGTCGCGTTTaGGCCCGATTTCTGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVSSGVKLHPLTQLCPSYYRGRV*ARFLSE Trigger: TTCTGACAGAAATCGGGCCCAAACGCGACCCCGATA...ATAAGATGGGCAGAGCTGTGTGAGAGGATGCAGTTTAACCCCTGAGCTTACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CAA 72 bp | GGAAGACCCAAAGCAGACCACTATAATTCTGATTTATaGCATTCCGTCTTACCACGGTCAGGGGAGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRPKADHYNSDL*HSVLPRSGEGL Trigger: CAGGCCCTCCCCTGACCGTGGTAAGACGGAATGCAATAAATCAGAATTATAGTGGTCTGCTTTGGGTCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCAGTGACACACCCCTTAAAAACAGTTCCACTGAGAACCAGGCATAGAACTTGGCCTCTTCTGCAATaGACCTGTGTGAAGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: PSVTHPLKTVPLRTRHRTWPLLQ*TCVKET Trigger: GGTTTCCTTCACACAGGTTCATTGCAGAAGAGGCCA...AGTTCTATGCCTGGTTCTCAGTGGAACTGTTTTTAAGGGGTGTGTCACTGAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGTACCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAAGCAGCCGCTCCATGTTaGTCAGGAATACTTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRYLLEHRLICLLNFHSQAAAPC*SGILSE Trigger: CTCTGAAAGTATTCCTGAGCAACATGGAGCGGCTGC...TTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGGTACCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CAA 72 bp | TCCAGGTACCTACTGGAGCACCGTTTAATCTGCCTATaGAACTTCCACTCCCAAGCATCCAACAGTGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRYLLEHRLICL*NFHSQASNSVS Trigger: GCTTACACTGTTGGATGCTTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGGTACCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR GCA 90 bp | AGACAGCAACAGGCCATGGCTTTGATAAAATGTGACAGACTGATGTCACTGTTCCAGAACCAAGGCCTTTaGGAGATCTGTCTCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RQQQAMALIKCDRLMSLFQNQGL*EICLPG Trigger: TCCAGGGAGACAGATCTCGCAAAGGCCTTGGTTCTG...GAACAGTGACATCAGTCTGTCACATTTTATCAAAGCCATGGCCTGTTGCTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAAGCATCCAACAGTGTAAGCTCAGGGGTTAAACTGCATCCTCTCACACAGAATCACAATGCCGCCTaGTTCTCTAATGATGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQASNSVSSGVKLHPLTQNHNAA*FSNDDC Trigger: ACAGTCATCATTAGAGAAGCAGGCGGCATTGTGATT...CTGTGTGAGAGGATGCAGTTTAACCCCTGAGCTTACACTGTTGGATGCTTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTAAGCTCAGGGGTTAAACTGCATCCTCTCACACAGCTCTGCCCATCTTATAAATCTTCTACTCGGTaGTCTGTTTCTGTCACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVSSGVKLHPLTQLCPSYKSSTR*SVSVTR Trigger: TCTTGTGACAGAAACAGATCACCGAGTAGAAGATTT...ATAAGATGGGCAGAGCTGTGTGAGAGGATGCAGTTTAACCCCTGAGCTTACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| CDS-3UTR TCA 90 bp | AATTTCTTGTGTAGCTACGTATATGTGAGGTGCTGTTTTGAGTGTGTTCTGAGAATAGTTTGTAGGGCCTaGGCTATGAGCACTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: NFLCSYVYVRCCFECVLRIVCRA*AMSTAI Trigger: GATGGCAGTGCTCATAGCTCAGGCCCTACAAACTAT...TCTCAGAACACACTCAAAACAGCACCTCACATATACGTAGCTACACAAGAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CAA 72 bp | GGGGAGAATTTGTACAGGACACCGCACTGTAGCTGTTaGGAGAATGTTGGAGATAAATTCACTAAACACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GENLYRTPHCSC*ENVGDKFTKHK Trigger: TTTGTGTTTAGTGAATTTATCTCCAACATTCTCCAAACAGCTACAGTGCGGTGTCCTGTACAAATTCTCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
||
| 3UTR CAA 72 bp | ATCTTCATAATCATTGCAGAGTCTCTGAGTAATTTCTaGTGTAGCTACGTATATGTGAGGTGCTGTTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IFIIIAESLSNF*CSYVYVRCCFE Trigger: CTCAAAACAGCACCTCACATATACGTAGCTACACAAGAAATTACTCAGAGACTCTGCAATGATTATGAAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS GCA 90 bp | TCTGTCAGGGCCTTCCTGATGATTTGTCCCGCACGCAGCGCCAACTaGACGGCCACCTCGAAGCACTCGTCCCAGGGGCCCACGCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SVRAFLMICPARSAN*TATSKHSSQGPTPC Trigger: GCAGGGCGTGGGCCCCTGGGACGAGTGCTTCGAGGTGGCCGTGCAGTTGGCGCTGCGTGCGGGACAAATCATCAGGAAGGCCCTGACAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS GCA 90 bp | CCTTTGCGAGATCTGTCTCCCTGGAGACCTGAAGCCGCTGGCCATTaGAAAAGGCGCCTTGGCCCCTCCTGCCGGTGTACAGCCGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PLRDLSPWRPEAAGH*KRRLGPSCRCTAAP Trigger: AGGAGCGGCTGTACACCGGCAGGAGGGGCCAAGGCGCCTTTTGCAATGGCCAGCGGCTTCAGGTCTCCAGGGAGACAGATCTCGCAAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS CCA 90 bp | AAGTTGCAGGTGCCGTCGATGGGGTCGATGATCCAGGTCGGGCTGTaGGTGAGCACACACTTGGCCCCGGAGGCTGTGGCCTCTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: KLQVPSMGSMIQVGL*VSTHLAPEAVASSA Trigger: TGCAGAAGAGGCCACAGCCTCCGGGGCCAAGTGTGTGCTCACCCACAGCCCGACCTGGATCATCGACCCCATCGACGGCACCTGCAACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS CCA 90 bp | AATAGGCGTCGGCTGCACCTGAGGCCAGGTAACAGAGGGCCAAGGTaGAGCTGCCAATCACTCGGACCCCATGAGCCTTGGCGTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: NRRRLHLRPGNRGPR*SCQSLGPHEPWRAA Trigger: TGCTGCACGCCAAGGCTCATGGGGTCCGAGTGATTGGCAGCTCCACCTTGGCCCTCTGTTACCTGGCCTCAGGTGCAGCCGACGCCTATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS GCA 90 bp | AGACCTGAAGCCGCTGGCCATTGCAAAAGGCGCCTTGGCCCCTCCTaGCGGTGTACAGCCGCTCCTCTGTGCAGTGGTGAATCACTCCAA | + |
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Preference number: 5 (lower is better) Translates to: RPEAAGHCKRRLGPS*RCTAAPLCSGESLQ Trigger: TTGGAGTGATTCACCACTGCACAGAGGAGCGGCTGTACACCGGCAGGAGGGGCCAAGGCGCCTTTTGCAATGGCCAGCGGCTTCAGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS GCA 90 bp | TCACTCGGACCCCATGAGCCTTGGCGTGCAGCAGCCGCTCCATGTTaGTCAGGAATACTTTCAGAGTATCGGGGTCGCGTTTGGGCCCGA | + |
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Preference number: 5 (lower is better) Translates to: SLGPHEPWRAAAAPC*SGILSEYRGRVWAR Trigger: TCGGGCCCAAACGCGACCCCGATACTCTGAAAGTATTCCTGAGCAACATGGAGCGGCTGCTGCACGCCAAGGCTCATGGGGTCCGAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS TCA 90 bp | GTCCCAGCAGTGAAGGCCAAACTGATAATAGGCGTCGGCTGCACCTaGGGCCAGGTAACAGAGGGCCAAGGTGGAGCTGCCAATCACTCG | + |
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Preference number: 5 (lower is better) Translates to: VPAVKAKLIIGVGCT*GQVTEGQGGAANHS Trigger: CGAGTGATTGGCAGCTCCACCTTGGCCCTCTGTTACCTGGCCTCAGGTGCAGCCGACGCCTATTATCAGTTTGGCCTTCACTGCTGGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS TCA 90 bp | GCACTGCCATCTCTCTGGTGCCAGCAGCTACGACTCTGCACGACATaGGGTCAAGGGGTCCACCTGAGGTGTCAATCACAATGCCGCCTG | + |
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Preference number: 5 (lower is better) Translates to: ALPSLWCQQLRLCTT*GQGVHLRCQSQCRL Trigger: CAGGCGGCATTGTGATTGACACCTCAGGTGGACCCCTTGACCTCATGTCGTGCAGAGTCGTAGCTGCTGGCACCAGAGAGATGGCAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS GCA 90 bp | AAAAGGCGCCTTGGCCCCTCCTGCCGGTGTACAGCCGCTCCTCTGTaGAGTGGTGAATCACTCCAAATTCCAGCTCCTGGTGAACAGCAA | + |
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Preference number: 5 (lower is better) Translates to: KRRLGPSCRCTAAPL*SGESLQIPAPGEQQ Trigger: TTGCTGTTCACCAGGAGCTGGAATTTGGAGTGATTCACCACTGCACAGAGGAGCGGCTGTACACCGGCAGGAGGGGCCAAGGCGCCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS GCA 90 bp | GTCAATCACAATGCCGCCTGCTTCTCTAATGATGACTGTGGCAGCTaGCAGGTCCCAGCAGTGAAGGCCAAACTGATAATAGGCGTCGGC | + |
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Preference number: 5 (lower is better) Translates to: VNHNAACFSNDDCGS*QVPAVKAKLIIGVG Trigger: GCCGACGCCTATTATCAGTTTGGCCTTCACTGCTGGGACCTGGCAGCTGCCACAGTCATCATTAGAGAAGCAGGCGGCATTGTGATTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS CCA 90 bp | GCTCCATGTTGCTCAGGAATACTTTCAGAGTATCGGGGTCGCGTTTaGGCCCGATTTCTGTCAGAACCAAGGCCTTTGCGAGATCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: APCCSGILSEYRGRV*ARFLSEPRPLRDLS Trigger: AGACAGATCTCGCAAAGGCCTTGGTTCTGACAGAAATCGGGCCCAAACGCGACCCCGATACTCTGAAAGTATTCCTGAGCAACATGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS-3UTR CAA 90 bp | CCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAAGCATCCAAGTATCGGGGTCGCGTTaGGGCCCGATTTCTGTCAGA | + |
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Preference number: 5 (lower is better) Translates to: PTGAPFNLPIELPLPSIQVSGSR*GPISVR Trigger: TCTGACAGAAATCGGGCCCAAACGCGACCCCGATAC...TTGGATGCTTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS-3UTR CAA 90 bp | CCTACTGGAGCACCGTTTAATCTGCCTATTGAACTTCCACTCCCAAGCATCCAATCAGAACCAAGGCCTTaGCGAGATCTGTCTCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: PTGAPFNLPIELPLPSIQSEPRP*RDLSPW Trigger: CCAGGGAGACAGATCTCGCAAAGGCCTTGGTTCTGA...TTGGATGCTTGGGAGTGGAAGTTCAATAGGCAGATTAAACGGTGCTCCAGTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS-3UTR CAA 90 bp | AGACAGCAACAGGCCATGGCTTTGATAAAATGTGACAGACTGATGTCACTGTTCAACCTGTGCACAAAGTaGCAGGTGCCGTCGATGGGG | + |
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Preference number: 5 (lower is better) Translates to: RQQQAMALIKCDRLMSLFNLCTK*QVPSMG Trigger: CCCCATCGACGGCACCTGCAACTTTGTGCACAGGTT...GAACAGTGACATCAGTCTGTCACATTTTATCAAAGCCATGGCCTGTTGCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS-3UTR CAA 90 bp | AATTTCTTGTGTAGCTACGTATATGTGAGGTGCTGTTTTGAGTGTGTTCTGAGAAGCAGCCGCTCCATGTaGCTCAGGAATACTTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: NFLCSYVYVRCCFECVLRSSRSM*LRNTFR Trigger: TCTGAAAGTATTCCTGAGCAACATGGAGCGGCTGCT...TCTCAGAACACACTCAAAACAGCACCTCACATATACGTAGCTACACAAGAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS TCA 90 bp | GGAAACCGCTTTCGCAACTCAGAAACAATTAAATCTTCTACTCGGTaGTCTGTTTCTGTCACAAGATCGGCAGCAGATGTTTTTGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: GNRFRNSETIKSSTR*SVSVTRSAADVFVE Trigger: CTCTACAAAAACATCTGCTGCCGATCTTGTGACAGAAACAGATCACCGAGTAGAAGATTTAATTGTTTCTGAGTTGCGAAAGCGGTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS GCA 72 bp | GCCACCTCGAAGCACTCGTCCCAGGGGCCCACGCCCTaGACCAACTCTCCCTCTTCCTCGCTGCTCGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ATSKHSSQGPTP*TNSPSSSLLGF Trigger: GAAGCCGAGCAGCGAGGAAGAGGGAGAGTTGGTGCAGGGCGTGGGCCCCTGGGACGAGTGCTTCGAGGTGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS GCA 72 bp | GCCTTCCTGATGATTTGTCCCGCACGCAGCGCCAACTaGACGGCCACCTCGAAGCACTCGTCCCAGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: AFLMICPARSAN*TATSKHSSQGP Trigger: GGGCCCCTGGGACGAGTGCTTCGAGGTGGCCGTGCAGTTGGCGCTGCGTGCGGGACAAATCATCAGGAAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS GCA 72 bp | GCCGCTGGCCATTGCAAAAGGCGCCTTGGCCCCTCCTaGCGGTGTACAGCCGCTCCTCTGTGCAGTGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: AAGHCKRRLGPS*RCTAAPLCSGE Trigger: TTCACCACTGCACAGAGGAGCGGCTGTACACCGGCAGGAGGGGCCAAGGCGCCTTTTGCAATGGCCAGCGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS CAA 72 bp | GGAGACCTGAAGCCGCTGGCCATTGCAAAAGGCGCCTaGGCCCCTCCTGCCGGTGTACAGCCGCTCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: GDLKPLAIAKGA*APPAGVQPLLC Trigger: ACAGAGGAGCGGCTGTACACCGGCAGGAGGGGCCAAGGCGCCTTTTGCAATGGCCAGCGGCTTCAGGTCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS CAA 90 bp | TGTCTCCCTGGAGACCTGAAGCCGCTGGCCATTGCAAAAGGCGCCTaGGCCCCTCCTGCCGGTGTACAGCCGCTCCTCTGTGCAGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: CLPGDLKPLAIAKGA*APPAGVQPLLCAVV Trigger: CACCACTGCACAGAGGAGCGGCTGTACACCGGCAGGAGGGGCCAAGGCGCCTTTTGCAATGGCCAGCGGCTTCAGGTCTCCAGGGAGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS CCA 72 bp | CGGCTGCACCTGAGGCCAGGTAACAGAGGGCCAAGGTaGAGCTGCCAATCACTCGGACCCCATGAGCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: RLHLRPGNRGPR*SCQSLGPHEPW Trigger: CCAAGGCTCATGGGGTCCGAGTGATTGGCAGCTCCACCTTGGCCCTCTGTTACCTGGCCTCAGGTGCAGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS GCA 72 bp | GATCTGTCTCCCTGGAGACCTGAAGCCGCTGGCCATTaGAAAAGGCGCCTTGGCCCCTCCTGCCGGTGTACA | + |
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Preference number: 6 (lower is better) Translates to: DLSPWRPEAAGH*KRRLGPSCRCT Trigger: TGTACACCGGCAGGAGGGGCCAAGGCGCCTTTTGCAATGGCCAGCGGCTTCAGGTCTCCAGGGAGACAGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS TCA 72 bp | ACCAAGGCCTTTGCGAGATCTGTCTCCCTGGAGACCTaGAGCCGCTGGCCATTGCAAAAGGCGCCTTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: TKAFARSVSLET*SRWPLQKAPWP Trigger: GGGCCAAGGCGCCTTTTGCAATGGCCAGCGGCTTCAGGTCTCCAGGGAGACAGATCTCGCAAAGGCCTTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS TCA 72 bp | GTGAAGGCCAAACTGATAATAGGCGTCGGCTGCACCTaGGGCCAGGTAACAGAGGGCCAAGGTGGAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: VKAKLIIGVGCT*GQVTEGQGGAA Trigger: GGCAGCTCCACCTTGGCCCTCTGTTACCTGGCCTCAGGTGCAGCCGACGCCTATTATCAGTTTGGCCTTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS GCA 72 bp | CTTGGCCCCTCCTGCCGGTGTACAGCCGCTCCTCTGTaGAGTGGTGAATCACTCCAAATTCCAGCTCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LGPSCRCTAAPL*SGESLQIPAPG Trigger: ACCAGGAGCTGGAATTTGGAGTGATTCACCACTGCACAGAGGAGCGGCTGTACACCGGCAGGAGGGGCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS CCA 72 bp | AGGTGGAGCTGCCAATCACTCGGACCCCATGAGCCTTaGCGTGCAGCAGCCGCTCCATGTTGCTCAGGAATA | + |
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Preference number: 6 (lower is better) Translates to: RWSCQSLGPHEP*RAAAAPCCSGI Trigger: TATTCCTGAGCAACATGGAGCGGCTGCTGCACGCCAAGGCTCATGGGGTCCGAGTGATTGGCAGCTCCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS CAA 90 bp | GCAAATCCGATGCTAACTGCCACAGTGGGGAACCTGTGCACAAAGTaGCAGGTGCCGTCGATGGGGTCGATGATCCAGGTCGGGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: ANPMLTATVGNLCTK*QVPSMGSMIQVGLW Trigger: CCACAGCCCGACCTGGATCATCGACCCCATCGACGGCACCTGCAACTTTGTGCACAGGTTCCCCACTGTGGCAGTTAGCATCGGATTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS GCA 72 bp | GCGTTTGGGCCCGATTTCTGTCAGAACCAAGGCCTTTaGGAGATCTGTCTCCCTGGAGACCTGAAGCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: AFGPDFCQNQGL*EICLPGDLKPL Trigger: CAGCGGCTTCAGGTCTCCAGGGAGACAGATCTCGCAAAGGCCTTGGTTCTGACAGAAATCGGGCCCAAACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS GCA 72 bp | CCCCATGAGCCTTGGCGTGCAGCAGCCGCTCCATGTTaGTCAGGAATACTTTCAGAGTATCGGGGTCGCGTT | + |
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Preference number: 6 (lower is better) Translates to: PHEPWRAAAAPC*SGILSEYRGRV Trigger: AACGCGACCCCGATACTCTGAAAGTATTCCTGAGCAACATGGAGCGGCTGCTGCACGCCAAGGCTCATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS CAA 72 bp | CGCGTTTGGGCCCGATTTCTGTCAGAACCAAGGCCTTaGCGAGATCTGTCTCCCTGGAGACCTGAAGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: RVWARFLSEPRP*RDLSPWRPEAA Trigger: AGCGGCTTCAGGTCTCCAGGGAGACAGATCTCGCAAAGGCCTTGGTTCTGACAGAAATCGGGCCCAAACGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS CAA 90 bp | TTTTGTAGAGACGCGTTTTTCCTCTGTCAGGGCCTTCCTGATGATTaGTCCCGCACGCAGCGCCAACTGCACGGCCACCTCGAAGCACTC | + |
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Preference number: 6 (lower is better) Translates to: FCRDAFFLCQGLPDD*SRTQRQLHGHLEAL Trigger: GAGTGCTTCGAGGTGGCCGTGCAGTTGGCGCTGCGTGCGGGACAAATCATCAGGAAGGCCCTGACAGAGGAAAAACGCGTCTCTACAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS CAA 72 bp | ATGCTAACTGCCACAGTGGGGAACCTGTGCACAAAGTaGCAGGTGCCGTCGATGGGGTCGATGATCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: MLTATVGNLCTK*QVPSMGSMIQV Trigger: GACCTGGATCATCGACCCCATCGACGGCACCTGCAACTTTGTGCACAGGTTCCCCACTGTGGCAGTTAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS TCA 72 bp | TCTCTCTGGTGCCAGCAGCTACGACTCTGCACGACATaGGGTCAAGGGGTCCACCTGAGGTGTCAATCACAA | + |
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Preference number: 6 (lower is better) Translates to: SLWCQQLRLCTT*GQGVHLRCQSQ Trigger: TTGTGATTGACACCTCAGGTGGACCCCTTGACCTCATGTCGTGCAGAGTCGTAGCTGCTGGCACCAGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS CAA 90 bp | CGCTCCATGTTGCTCAGGAATACTTTCAGAGTATCGGGGTCGCGTTaGGGCCCGATTTCTGTCAGAACCAAGGCCTTTGCGAGATCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RSMLLRNTFRVSGSR*GPISVRTKAFARSV Trigger: GACAGATCTCGCAAAGGCCTTGGTTCTGACAGAAATCGGGCCCAAACGCGACCCCGATACTCTGAAAGTATTCCTGAGCAACATGGAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS CCA 72 bp | TGCTCAGGAATACTTTCAGAGTATCGGGGTCGCGTTTaGGCCCGATTTCTGTCAGAACCAAGGCCTTTGCGA | + |
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Preference number: 6 (lower is better) Translates to: CSGILSEYRGRV*ARFLSEPRPLR Trigger: TCGCAAAGGCCTTGGTTCTGACAGAAATCGGGCCCAAACGCGACCCCGATACTCTGAAAGTATTCCTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS CAA 72 bp | TTGCTCAGGAATACTTTCAGAGTATCGGGGTCGCGTTaGGGCCCGATTTCTGTCAGAACCAAGGCCTTTGCG | + |
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Preference number: 6 (lower is better) Translates to: LLRNTFRVSGSR*GPISVRTKAFA Trigger: CGCAAAGGCCTTGGTTCTGACAGAAATCGGGCCCAAACGCGACCCCGATACTCTGAAAGTATTCCTGAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS GCA 72 bp | AATGCCGCCTGCTTCTCTAATGATGACTGTGGCAGCTaGCAGGTCCCAGCAGTGAAGGCCAAACTGATAATA | + |
|
Preference number: 6 (lower is better) Translates to: NAACFSNDDCGS*QVPAVKAKLII Trigger: TATTATCAGTTTGGCCTTCACTGCTGGGACCTGGCAGCTGCCACAGTCATCATTAGAGAAGCAGGCGGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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| CDS TCA 72 bp | TTTCGCAACTCAGAAACAATTAAATCTTCTACTCGGTaGTCTGTTTCTGTCACAAGATCGGCAGCAGATGTT | + |
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Preference number: 6 (lower is better) Translates to: FRNSETIKSSTR*SVSVTRSAADV Trigger: AACATCTGCTGCCGATCTTGTGACAGAAACAGATCACCGAGTAGAAGATTTAATTGTTTCTGAGTTGCGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025403.8 |
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