Pregenerated sensors for IMPA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027531Ensembl transcript IDs: ENSMUST00000065938.15, ENSMUST00000118410.8, ENSMUST00000191670.6
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCCTTACGCTGAGCAGGTGCCGCACATGTGCAGAGCTATCCTGTaGACTGCTGCTTGCACACACAGGGGTATCCACCATACCTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: PPYAEQVPHMCRAIL*TAACTHRGIHHTSR Trigger: TCTGGAGGTATGGTGGATACCCCTGTGTGTGCAAGCAGCAGTGCACAGGATAGCTCTGCACATGTGCGGCACCTGCTCAGCGTAAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR GCA 90 bp | AGATCTTCGAGCTGGTGGAATGGCTTGGTAGGGAAGCCTGGTCCATaGCTGATGCCCCTCAGGTTCAATTGCCCTGACAGCCACAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: RSSSWWNGLVGKPGP*LMPLRFNCPDSHRH Trigger: GTGCCTGTGGCTGTCAGGGCAATTGAACCTGAGGGGCATCAGGCATGGACCAGGCTTCCCTACCAAGCCATTCCACCAGCTCGAAGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR GCA 90 bp | GAGCAGGTGCCGCACATGTGCAGAGCTATCCTGTGCACTGCTGCTTaGACACACAGGGGTATCCACCATACCTCCAGAGACATCAGAGTT | + |
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Preference number: 1 (lower is better) Translates to: EQVPHMCRAILCTAA*THRGIHHTSRDIRV Trigger: AACTCTGATGTCTCTGGAGGTATGGTGGATACCCCTGTGTGTGCAAGCAGCAGTGCACAGGATAGCTCTGCACATGTGCGGCACCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR CCA 90 bp | ACAGAGCCCATTTTTCACTATCACTGTGGTCCTGTCCAAAGTTCATaGTCCAAGCCTCAGAGGTGGTGCAGAGCTCTCCAGGCCTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: TEPIFHYHCGPVQSS*SKPQRWCRALQASQ Trigger: CTGAGAGGCCTGGAGAGCTCTGCACCACCTCTGAGGCTTGGACCATGAACTTTGGACAGGACCACAGTGATAGTGAAAAATGGGCTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| 3UTR GCA 90 bp | CCAGCACCACAGAAACTGTGTGTGGTGGCCTGTGGCCATCTTCTCTaGATCCCAGAACTTAAGAGAGAAAAGCAGAGCCGTCACAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: PAPQKLCVVACGHLL*IPELKREKQSRHKF Trigger: GAACTTGTGACGGCTCTGCTTTTCTCTCTTAAGTTCTGGGATGCAGAGAAGATGGCCACAGGCCACCACACACAGTTTCTGTGGTGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR TCA 90 bp | ACTGCCTACTGTCTGACAGGCACTGGGCCAGGCACTATCTTACAGTaGTTAATAAAACACAAAGGCCCTCTGCACAGGGAGAGCCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: TAYCLTGTGPGTILQ*LIKHKGPLHRESQL Trigger: AAGCTGGCTCTCCCTGTGCAGAGGGCCTTTGTGTTTTATTAATCACTGTAAGATAGTGCCTGGCCCAGTGCCTGTCAGACAGTAGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| 3UTR TCA 90 bp | GATCAGTGGATAGCTTCCAGCTGTCAGGTTTTCCCTTCTACCTTGTaGACCCCAGGGATCAACCTCAGGTTGTCAGACTTGAAGAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: DQWIASSCQVFPSTL*TPGINLRLSDLKKS Trigger: GCTCTTCTTCAAGTCTGACAACCTGAGGTTGATCCCTGGGGTTCACAAGGTAGAAGGGAAAACCTGACAGCTGGAAGCTATCCACTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR TCA 90 bp | CCTCTGTTTCTTGTGGGCGCTCTTCTACTTCATCTCTCTAATGTCTaGGGACAGGCACACTCACACCCATACACTGTCACATGTGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: PLFLVGALLLHLSNV*GQAHSHPYTVTCVR Trigger: CCTCACACATGTGACAGTGTATGGGTGTGAGTGTGCCTGTCCTCAGACATTAGAGAGATGAAGTAGAAGAGCGCCCACAAGAAACAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| 3UTR TCA 90 bp | AATCAGGACCTCAAAGTTCAGTCTAAATCAGTGACACCATCCATCTaGAACACCCCAGGGACAGCAAGGATGACACTGGAGCTGGACACT | + |
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Preference number: 1 (lower is better) Translates to: NQDLKVQSKSVTPSI*NTPGTARMTLELDT Trigger: AGTGTCCAGCTCCAGTGTCATCCTTGCTGTCCCTGGGGTGTTTCAGATGGATGGTGTCACTGATTTAGACTGAACTTTGAGGTCCTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 ENSMUST00000191670.6 |
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| 3UTR TCA 90 bp | CCCAGGGACAGCAAGGATGACACTGGAGCTGGACACTGTTCTCTGTaGCTAGCTTTCGTCGTCTCTTTGCAAAGGTATTATCTCAATTTC | + |
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Preference number: 1 (lower is better) Translates to: PRDSKDDTGAGHCSL*LAFVVSLQRYYLNF Trigger: GAAATTGAGATAATACCTTTGCAAAGAGACGACGAAAGCTAGTCACAGAGAACAGTGTCCAGCTCCAGTGTCATCCTTGCTGTCCCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118410.8 ENSMUST00000191670.6 |
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| 3UTR CCA 90 bp | AATGCTAGCGATCTCCAATTGGAATGCAGGATCCTCTGTTTCTTGTaGGCGCTCTTCTACTTCATCTCTCTAATGTCTGAGGACAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: NASDLQLECRILCFL*ALFYFISLMSEDRH Trigger: GTGCCTGTCCTCAGACATTAGAGAGATGAAGTAGAAGAGCGCCCACAAGAAACAGAGGATCCTGCATTCCAATTGGAGATCGCTAGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| 3UTR CCA 90 bp | AGCAGTGTACTAACTGCAGAAATGTCCACTAGAAGCAGTCGTCTCTaGCAGCACGATCCTGTGAAATGGCATAGCAATAAGAAATATAAA | + |
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Preference number: 1 (lower is better) Translates to: SSVLTAEMSTRSSRL*QHDPVKWHSNKKYK Trigger: TTTATATTTCTTATTGCTATGCCATTTCACAGGATCGTGCTGCCAGAGACGACTGCTTCTAGTGGACATTTCTGCAGTTAGTACACTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| 3UTR CCA 90 bp | CACAGGGAGAGCCAGCTTGTTACAGCCTTTAGACTTAATCAAATATaGCTTCTGGAACATAGAGAAAGCCACTTACAAAAAGAAACTTTG | + |
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Preference number: 1 (lower is better) Translates to: HRESQLVTAFRLNQI*LLEHRESHLQKETL Trigger: CAAAGTTTCTTTTTGTAAGTGGCTTTCTCTATGTTCCAGAAGCCATATTTGATTAAGTCTAAAGGCTGTAACAAGCTGGCTCTCCCTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| 3UTR-3UTR GCA 90 bp | GCCGCACATGTGCAGAGCTATCCTGTGCACTGCTGCTTGCACACACAGGGGTATAACACAAAGGCCCTCTaGACAGGGAGAGCCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: AAHVQSYPVHCCLHTQGYNTKAL*TGRASL Trigger: CAAGCTGGCTCTCCCTGTGCAGAGGGCCTTTGTGTT...ATACCCCTGTGTGTGCAAGCAGCAGTGCACAGGATAGCTCTGCACATGTGCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR-3UTR CCA 90 bp | AATGGCTTGGTAGGGAAGCCTGGTCCATGCCTGATGCCCCTCAGGTTCAATTGCCACAGAAACTGTGTGTaGTGGCCTGTGGCCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: NGLVGKPGPCLMPLRFNCHRNCV*WPVAIF Trigger: GAAGATGGCCACAGGCCACCACACACAGTTTCTGTG...GCAATTGAACCTGAGGGGCATCAGGCATGGACCAGGCTTCCCTACCAAGCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR CAA 90 bp | AATTACTCCTTTAATTCCACGTGTGTTCATGGGCTGGAGCGCAGCTaGGGCAGCAGAGTGCTTACGCTAAGTACACGTGTGGCCCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: NYSFNSTCVHGLERS*GSRVLTLSTRVALC Trigger: GCACAGGGCCACACGTGTACTTAGCGTAAGCACTCTGCTGCCCAAGCTGCGCTCCAGCCCATGAACACACGTGGAATTAAAGGAGTAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR-3UTR TCA 90 bp | GGGACAGAAAGCCGACATCTCCCTCCTCTAAATACCATCAGGATTTTGATCAGGAGACTGCCTACTGTCTaGCAGGCACTGGGCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: GTESRHLPPLNTIRILIRRLPTV*QALGQA Trigger: TGCCTGGCCCAGTGCCTGTCAGACAGTAGGCAGTCT...CCTGATCAAAATCCTGATGGTATTTAGAGGAGGGAGATGTCGGCTTTCTGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR-3UTR TCA 90 bp | GCATTAGAGGCAGCAGCTGCAGCTTCGAGCACGCATTGTCAGGTGTGGACTTCAACACTGTCACAGGTATaGGACAGTCACACTCACACC | + |
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Preference number: 2 (lower is better) Translates to: ALEAAAAASSTHCQVWTSTLSQV*DSHTHT Trigger: GGTGTGAGTGTGACTGTCTCATACCTGTGACAGTGT...TGAAGTCCACACCTGACAATGCGTGCTCGAAGCTGCAGCTGCTGCCTCTAATGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| 3UTR-3UTR TCA 90 bp | GCCGCACATGTGCAGAGCTATCCTGTGCACTGCTGCTTGCACACACAGGGGTATGTGATTCGGGGTACCTaGCTTTCTGGTCATCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: AAHVQSYPVHCCLHTQGYVIRGT*LSGHLF Trigger: AAAAAGATGACCAGAAAGTCAGGTACCCCGAATCAC...ATACCCCTGTGTGTGCAAGCAGCAGTGCACAGGATAGCTCTGCACATGTGCGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR-3UTR GCA 90 bp | GGTTTTCCCTTCTACCTTGTGAACCCCAGGGATCAACCTCAGGTTGTCAGACTTCTGTGCACTGCTGCTTaGACACACAGGGGTATCCAC | + |
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Preference number: 2 (lower is better) Translates to: GFPFYLVNPRDQPQVVRLLCTAA*THRGIH Trigger: GTGGATACCCCTGTGTGTGCAAGCAGCAGTGCACAG...AAGTCTGACAACCTGAGGTTGATCCCTGGGGTTCACAAGGTAGAAGGGAAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR-3UTR GCA 90 bp | GGTTTTCCCTTCTACCTTGTGAACCCCAGGGATCAACCTCAGGTTGTCAGACTTTTTACCTCACAGAGCTaGTTGCGTGGCCTTGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: GFPFYLVNPRDQPQVVRLFTSQS*LRGLGQ Trigger: TTGCCCAAGGCCACGCAAGCAGCTCTGTGAGGTAAA...AAGTCTGACAACCTGAGGTTGATCCCTGGGGTTCACAAGGTAGAAGGGAAAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR-3UTR CCA 90 bp | GGTTTTCCCTTCTACCTTGTGAACCCCAGGGATCAACCTCAGGTTGTCAGACTTCTGTCTGACAGGCACTaGGCCAGGCACTATCTTACA | + |
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Preference number: 2 (lower is better) Translates to: GFPFYLVNPRDQPQVVRLLSDRH*ARHYLT Trigger: TGTAAGATAGTGCCTGGCCCAGTGCCTGTCAGACAG...AAGTCTGACAACCTGAGGTTGATCCCTGGGGTTCACAAGGTAGAAGGGAAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR-3UTR GCA 90 bp | GGGACAGAAAGCCGACATCTCCCTCCTCTAAATACCATCAGGATTTTGATCAGGTGCAGAGCTATCCTGTaGACTGCTGCTTGCACACAC | + |
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Preference number: 2 (lower is better) Translates to: GTESRHLPPLNTIRILIRCRAIL*TAACTH Trigger: GTGTGTGCAAGCAGCAGTGCACAGGATAGCTCTGCA...CCTGATCAAAATCCTGATGGTATTTAGAGGAGGGAGATGTCGGCTTTCTGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR-3UTR GCA 90 bp | TTAGAGGCAGCAGCTGCAGCTTCGAGCACGCATTGTCAGGTGTGGACTTCAGACCTTCCTGTTTCAGTGTaGTGTATCTCATGGTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LEAAAAASSTHCQVWTSDLPVSV*CISWFL Trigger: CAGAAACCATGAGATACAGCACACTGAAACAGGAAG...GTCTGAAGTCCACACCTGACAATGCGTGCTCGAAGCTGCAGCTGCTGCCTCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| 3UTR CAA 90 bp | GCCAATGCTAGCGATCTCCAATTGGAATGCAGGATCCTCTGTTTCTaGTGGGCGCTCTTCTACTTCATCTCTCTAATGTCTGAGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: ANASDLQLECRILCF*WALFYFISLMSEDR Trigger: CCTGTCCTCAGACATTAGAGAGATGAAGTAGAAGAGCGCCCACAAGAAACAGAGGATCCTGCATTCCAATTGGAGATCGCTAGCATTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| 3UTR-3UTR TCA 90 bp | GTTATACTATTTGCGGCAATTATTCTCCGAGACATCAGATCGAACGGTCCACCTGTGACACCATCCATCTaGAACACCCCAGGGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: VILFAAIILRDIRSNGPPVTPSI*NTPGTA Trigger: TGCTGTCCCTGGGGTGTTTCAGATGGATGGTGTCAC...AGGTGGACCGTTCGATCTGATGTCTCGGAGAATAATTGCCGCAAATAGTATAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGGAGGGTGGTTATCTTACTGTGACGCATTAGAGGCAGCAGCTGCAGCTTCGGATCTCCAATTGGAATaGAGGATCCTCTGTTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: TGGWLSYCDALEAAAAASDLQLE*RILCFL Trigger: CAAGAAACAGAGGATCCTGCATTCCAATTGGAGATC...CGAAGCTGCAGCTGCTGCCTCTAATGCGTCACAGTAAGATAACCACCCTCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGAGGCAGCAGCTGCAGCTTCGAGCACGCATTGTCAGGTGTGGACTTCAGACGGCACTATCTTACAGTaGTTAATAAAACACAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LEAAAAASSTHCQVWTSDGTILQ*LIKHKG Trigger: GCCTTTGTGTTTTATTAATCACTGTAAGATAGTGCC...GTCTGAAGTCCACACCTGACAATGCGTGCTCGAAGCTGCAGCTGCTGCCTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCCACTAACTAGACCAGGTACCTGGAAGATGTCTGTGAAAATCTCTTTAGCAGTGTGGACTTCAGACTaGCTACTGTCTGACAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: LPLTRPGTWKMSVKISLAVWTSD*LLSDRH Trigger: GTGCCTGTCAGACAGTAGGCAGTCTGAAGTCCACAC...TGCTAAAGAGATTTTCACAGACATCTTCCAGGTACCTGGTCTAGTTAGTGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| 3UTR-3UTR CCA 90 bp | GTTATACTATTTGCGGCAATTATTCTCCGAGACATCAGATCGAACGGTCCACCTACGCATTGTCAGGTGTaGACTTCAGACTGCCTACTG | + |
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Preference number: 2 (lower is better) Translates to: VILFAAIILRDIRSNGPPTHCQV*TSDCLL Trigger: CAGTAGGCAGTCTGAAGTCCACACCTGACAATGCGT...AGGTGGACCGTTCGATCTGATGTCTCGGAGAATAATTGCCGCAAATAGTATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTTTCCCTTCTACCTTGTGAACCCCAGGGATCAACCTCAGGTTGTCAGACTTACTAGACCAGGTACCTaGAAGATGTCTGTGAAAATC | + |
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Preference number: 2 (lower is better) Translates to: GFPFYLVNPRDQPQVVRLTRPGT*KMSVKI Trigger: GATTTTCACAGACATCTTCCAGGTACCTGGTCTAGT...AAGTCTGACAACCTGAGGTTGATCCCTGGGGTTCACAAGGTAGAAGGGAAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR-3UTR TCA 90 bp | ATTCTGAGGGCAGCCTGGGATACGCAAATGAATACAATGAAAGAAAATGGTATTGTGACACCATCCATCTaGAACACCCCAGGGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: ILRAAWDTQMNTMKENGIVTPSI*NTPGTA Trigger: TGCTGTCCCTGGGGTGTTTCAGATGGATGGTGTCAC...AATACCATTTTCTTTCATTGTATTCATTTGCGTATCCCAGGCTGCCCTCAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR-3UTR TCA 90 bp | AATTATGCATATAAACAGTACATTAAGTTGAAGGGGATCATAAGGACTAGGGACGTGACACCATCCATCTaGAACACCCCAGGGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: NYAYKQYIKLKGIIRTRDVTPSI*NTPGTA Trigger: TGCTGTCCCTGGGGTGTTTCAGATGGATGGTGTCAC...GTCCCTAGTCCTTATGATCCCCTTCAACTTAATGTACTGTTTATATGCATAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 ENSMUST00000191670.6 |
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| 3UTR-3UTR GCA 90 bp | TATAACTCCAAGCTGAACCAAAGCAATACTTTTCTTATTAATCCCCTCAGAGAAAGCTATCCTGTGCACTaGTGCTTGCACACACAGGGG | + |
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Preference number: 2 (lower is better) Translates to: YNSKLNQSNTFLINPLRESYPVH*CLHTQG Trigger: CCCCTGTGTGTGCAAGCAGCAGTGCACAGGATAGCT...TTCTCTGAGGGGATTAATAAGAAAAGTATTGCTTTGGTTCAGCTTGGAGTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR-3UTR CCA 90 bp | ATTCTGAGGGCAGCCTGGGATACGCAAATGAATACAATGAAAGAAAATGGTATTACGCATTGTCAGGTGTaGACTTCAGACTGCCTACTG | + |
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Preference number: 2 (lower is better) Translates to: ILRAAWDTQMNTMKENGITHCQV*TSDCLL Trigger: CAGTAGGCAGTCTGAAGTCCACACCTGACAATGCGT...AATACCATTTTCTTTCATTGTATTCATTTGCGTATCCCAGGCTGCCCTCAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR-3UTR CCA 90 bp | ATATCCCTGCCACTAACTAGACCAGGTACCTGGAAGATGTCTGTGAAAATCTCTCCAGAGCAAAATAGTTaGAGGACAGAGCCCATTTTT | + |
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Preference number: 2 (lower is better) Translates to: ISLPLTRPGTWKMSVKISPEQNS*RTEPIF Trigger: AAAAATGGGCTCTGTCCTCCAACTATTTTGCTCTGG...AGAGATTTTCACAGACATCTTCCAGGTACCTGGTCTAGTTAGTGGCAGGGATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCACTAACTAGACCAGGTACCTGGAAGATGTCTGTGAAAATCTCTTTAGCAGCCAAGGCTAGACAATaGATTAACCCTTTAACAAAG | + |
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Preference number: 2 (lower is better) Translates to: LPLTRPGTWKMSVKISLAAKARQ*INPLTK Trigger: CTTTGTTAAAGGGTTAATTCATTGTCTAGCCTTGGC...TGCTAAAGAGATTTTCACAGACATCTTCCAGGTACCTGGTCTAGTTAGTGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGATGAAATTCAGCAAGTCTGGAAAGAAATCAAAAAGTTCACCATTACACCAACACTGTCACATGTGTaGGGACAGTCACACTCACCC | + |
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Preference number: 2 (lower is better) Translates to: SDEIQQVWKEIKKFTITPTLSHV*GQSHSP Trigger: GGGTGAGTGTGACTGTCCTCACACATGTGACAGTGT...TGGTGTAATGGTGAACTTTTTGATTTCTTTCCAGACTTGCTGAATTTCATCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCACTAACTAGACCAGGTACCTGGAAGATGTCTGTGAAAATCTCTTTAGCAGGCACTATCTTACAGTaGTTAATAAAACACAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LPLTRPGTWKMSVKISLAGTILQ*LIKHKG Trigger: GCCTTTGTGTTTTATTAATCACTGTAAGATAGTGCC...TGCTAAAGAGATTTTCACAGACATCTTCCAGGTACCTGGTCTAGTTAGTGGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| 3UTR-3UTR TCA 90 bp | TGGACACTGTTCTCTGTGACTAGCTTTCGTCGTCTCTTTGCAAAGGTATTATCTTCTCGATATTCACAATaGAGGCATGAAGGAATTCTC | + |
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Preference number: 2 (lower is better) Translates to: WTLFSVTSFRRLFAKVLSSRYSQ*RHEGIL Trigger: GAGAATTCCTTCATGCCTTCATTGTGAATATCGAGA...AGATAATACCTTTGCAAAGAGACGACGAAAGCTAGTCACAGAGAACAGTGTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| 3UTR CAA 90 bp | TTATCTCAATTTCTTTGGCTATTCTTTTGGCTAATGTTATACTATTaGCGGCAATTATTCTCCGAGACATCAGATCGAACGGTCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: LSQFLWLFFWLMLYY*RQLFSETSDRTVHL Trigger: CAGGTGGACCGTTCGATCTGATGTCTCGGAGAATAATTGCCGCAAATAGTATAACATTAGCCAAAAGAATAGCCAAAGAAATTGAGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| 3UTR-3UTR TCA 90 bp | TATAAAAAGGACAGTGAAGTAACTTCTACCTCGCAACAGGAGGGTGGTTATCTTATCGAACGGTCCACCTaGAATCAAATCAAATATAGA | + |
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Preference number: 2 (lower is better) Translates to: YKKDSEVTSTSQQEGGYLIERST*NQIKYR Trigger: TCTATATTTGATTTGATTTCAGGTGGACCGTTCGAT...AAGATAACCACCCTCCTGTTGCGAGGTAGAAGTTACTTCACTGTCCTTTTTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| 3UTR-3UTR CCA 90 bp | CAAATGCAAGGTTCAAACATACTAAGAGCAAAACATCTGTTCATATGCCAAGGGATCAAATATGGCTTCTaGAACATAGAGAAAGCCACT | + |
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Preference number: 2 (lower is better) Translates to: QMQGSNILRAKHLFICQGIKYGF*NIEKAT Trigger: AGTGGCTTTCTCTATGTTCCAGAAGCCATATTTGAT...CCCTTGGCATATGAACAGATGTTTTGCTCTTAGTATGTTTGAACCTTGCATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGATGAAATTCAGCAAGTCTGGAAAGAAATCAAAAAGTTCACCATTACACCAATCAAATATGGCTTCTaGAACATAGAGAAAGCCACT | + |
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Preference number: 2 (lower is better) Translates to: SDEIQQVWKEIKKFTITPIKYGF*NIEKAT Trigger: AGTGGCTTTCTCTATGTTCCAGAAGCCATATTTGAT...TGGTGTAATGGTGAACTTTTTGATTTCTTTCCAGACTTGCTGAATTTCATCACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGATGAAATTCAGCAAGTCTGGAAAGAAATCAAAAAGTTCACCATTACACCACTTTCGTCGTCTCTTTaGAAAGGTATTATCTCAATT | + |
|
Preference number: 2 (lower is better) Translates to: SDEIQQVWKEIKKFTITPLSSSL*KGIISI Trigger: AATTGAGATAATACCTTTGCAAAGAGACGACGAAAG...TGGTGTAATGGTGAACTTTTTGATTTCTTTCCAGACTTGCTGAATTTCATCACT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
||
| 3UTR GCA 72 bp | GGATCTGATCTCCGACCCCTCCTTACGCTGAGCAGGTaGCGCACATGTGCAGAGCTATCCTGTGCACTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GSDLRPLLTLSR*RTCAELSCALL Trigger: CAGCAGTGCACAGGATAGCTCTGCACATGTGCGGCACCTGCTCAGCGTAAGGAGGGGTCGGAGATCAGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR CCA 72 bp | GGTCCTGTCCAAAGTTCATGGTCCAAGCCTCAGAGGTaGTGCAGAGCTCTCCAGGCCTCTCAGGAGCTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: GPVQSSWSKPQR*CRALQASQELS Trigger: CGAGAGCTCCTGAGAGGCCTGGAGAGCTCTGCACCACCTCTGAGGCTTGGACCATGAACTTTGGACAGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
||
| 3UTR GCA 72 bp | GGTGCCGCACATGTGCAGAGCTATCCTGTGCACTGCTaGTTGCACACACAGGGGTATCCACCATACCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GAAHVQSYPVHC*LHTQGYPPYLQ Trigger: CTGGAGGTATGGTGGATACCCCTGTGTGTGCAAGCAGCAGTGCACAGGATAGCTCTGCACATGTGCGGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR GCA 72 bp | AGCTGGTGGAATGGCTTGGTAGGGAAGCCTGGTCCATaGCTGATGCCCCTCAGGTTCAATTGCCCTGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: SWWNGLVGKPGP*LMPLRFNCPDS Trigger: GCTGTCAGGGCAATTGAACCTGAGGGGCATCAGGCATGGACCAGGCTTCCCTACCAAGCCATTCCACCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR GCA 72 bp | CCGCACATGTGCAGAGCTATCCTGTGCACTGCTGCTTaGACACACAGGGGTATCCACCATACCTCCAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PHMCRAILCTAA*THRGIHHTSRD Trigger: GTCTCTGGAGGTATGGTGGATACCCCTGTGTGTGCAAGCAGCAGTGCACAGGATAGCTCTGCACATGTGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR GCA 72 bp | AAGCCTGGTCCATGCCTGATGCCCCTCAGGTTCAATTaGCCTGACAGCCACAGGCACAGTGATGCACACATG | + |
|
Preference number: 3 (lower is better) Translates to: KPGPCLMPLRFN*PDSHRHSDAHM Trigger: CATGTGTGCATCACTGTGCCTGTGGCTGTCAGGGCAATTGAACCTGAGGGGCATCAGGCATGGACCAGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR GCA 72 bp | CCTGTCCAAAGTTCATGGTCCAAGCCTCAGAGGTGGTaGAGAGCTCTCCAGGCCTCTCAGGAGCTCTCGATA | + |
|
Preference number: 3 (lower is better) Translates to: PVQSSWSKPQRW*RALQASQELSI Trigger: TATCGAGAGCTCCTGAGAGGCCTGGAGAGCTCTGCACCACCTCTGAGGCTTGGACCATGAACTTTGGACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
||
| 3UTR CCA 72 bp | ATCTTCGAGCTGGTGGAATGGCTTGGTAGGGAAGCCTaGTCCATGCCTGATGCCCCTCAGGTTCAATTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: IFELVEWLGREA*SMPDAPQVQLP Trigger: GGGCAATTGAACCTGAGGGGCATCAGGCATGGACCAGGCTTCCCTACCAAGCCATTCCACCAGCTCGAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR TCA 72 bp | CATAGCCTCAAGCTGCCAGGAAGAAGGCTCCGAAAATaGGAACACGAGATAAACGCTGGGCTAGGGCGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: HSLKLPGRRLRK*EHEINAGLGRG Trigger: CCCTCGCCCTAGCCCAGCGTTTATCTCGTGTTCTCATTTTCGGAGCCTTCTTCCTGGCAGCTTGAGGCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR TCA 72 bp | CTTCTACCTCGCAACAGGAGGGTGGTTATCTTACTGTaGCGCATTAGAGGCAGCAGCTGCAGCTTCGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLPRNRRVVILL*RIRGSSCSFEH Trigger: GTGCTCGAAGCTGCAGCTGCTGCCTCTAATGCGTCACAGTAAGATAACCACCCTCCTGTTGCGAGGTAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
||
| 3UTR GCA 72 bp | AGAGCAGCCTGGGACTCTTTACCTCACAGAGCTGCTTaGGTGGCCTTGGGCAAATGCCACTGCTTTAATTAC | + |
|
Preference number: 3 (lower is better) Translates to: RAAWDSLPHRAA*VALGKCHCFNY Trigger: GTAATTAAAGCAGTGGCATTTGCCCAAGGCCACGCAAGCAGCTCTGTGAGGTAAAGAGTCCCAGGCTGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR GCA 72 bp | CAGAAACTGTGTGTGGTGGCCTGTGGCCATCTTCTCTaGATCCCAGAACTTAAGAGAGAAAAGCAGAGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: QKLCVVACGHLL*IPELKREKQSR Trigger: ACGGCTCTGCTTTTCTCTCTTAAGTTCTGGGATGCAGAGAAGATGGCCACAGGCCACCACACACAGTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR TCA 72 bp | TGTCTGACAGGCACTGGGCCAGGCACTATCTTACAGTaGTTAATAAAACACAAAGGCCCTCTGCACAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CLTGTGPGTILQ*LIKHKGPLHRE Trigger: CTCCCTGTGCAGAGGGCCTTTGTGTTTTATTAATCACTGTAAGATAGTGCCTGGCCCAGTGCCTGTCAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
||
| 3UTR TCA 72 bp | CTTGTGGGCGCTCTTCTACTTCATCTCTCTAATGTCTaGGGACAGGCACACTCACACCCATACACTGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: LVGALLLHLSNV*GQAHSHPYTVT Trigger: TGTGACAGTGTATGGGTGTGAGTGTGCCTGTCCTCAGACATTAGAGAGATGAAGTAGAAGAGCGCCCACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
||
| 3UTR CCA 72 bp | ATTTTTCACTATCACTGTGGTCCTGTCCAAAGTTCATaGTCCAAGCCTCAGAGGTGGTGCAGAGCTCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: IFHYHCGPVQSS*SKPQRWCRALQ Trigger: CTGGAGAGCTCTGCACCACCTCTGAGGCTTGGACCATGAACTTTGGACAGGACCACAGTGATAGTGAAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
||
| 3UTR TCA 72 bp | CTCAAAGTTCAGTCTAAATCAGTGACACCATCCATCTaGAACACCCCAGGGACAGCAAGGATGACACTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LKVQSKSVTPSI*NTPGTARMTLE Trigger: CTCCAGTGTCATCCTTGCTGTCCCTGGGGTGTTTCAGATGGATGGTGTCACTGATTTAGACTGAACTTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 ENSMUST00000191670.6 |
||
| 3UTR TCA 72 bp | AGGTTGTCAGACTTGAAGAAGAGCACCTTTACTCACTaGCTCATCTGTGTGGCCTCCTCCTTTCTGTCCGAT | + |
|
Preference number: 3 (lower is better) Translates to: RLSDLKKSTFTH*LICVASSFLSD Trigger: ATCGGACAGAAAGGAGGAGGCCACACAGATGAGTCAGTGAGTAAAGGTGCTCTTCTTCAAGTCTGACAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR TCA 72 bp | TGTGAACCCCAGGGATCAACCTCAGGTTGTCAGACTTaGAGAAGAGCACCTTTACTCACTGACTCATCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CEPQGSTSGCQT*RRAPLLTDSSV Trigger: CACAGATGAGTCAGTGAGTAAAGGTGCTCTTCTTCAAGTCTGACAACCTGAGGTTGATCCCTGGGGTTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR-3UTR CAA 90 bp | GTTATACTATTTGCGGCAATTATTCTCCGAGACATCAGATCGAACGGTCCACCTGCTAGCGATCTCCAATaGGAATGCAGGATCCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VILFAAIILRDIRSNGPPASDLQ*ECRILC Trigger: ACAGAGGATCCTGCATTCCAATTGGAGATCGCTAGC...AGGTGGACCGTTCGATCTGATGTCTCGGAGAATAATTGCCGCAAATAGTATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGAGGGTGGTTATCTTACTGTGACGCATTAGAGGCAGCAGCTGCAGCTTCGCTAATGTTATACTATTaGCGGCAATTATTCTCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: TGGWLSYCDALEAAAAASLMLYY*RQLFSE Trigger: CTCGGAGAATAATTGCCGCAAATAGTATAACATTAG...CGAAGCTGCAGCTGCTGCCTCTAATGCGTCACAGTAAGATAACCACCCTCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
||
| 3UTR TCA 72 bp | CACCACAGTACACAGGTCAGCACCAGGGTACGGATCTaGATGAGAAAGCTGCCTTTTGTAAAACATATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: HHSTQVSTRVRI*MRKLPFVKHIP Trigger: AGGGATATGTTTTACAAAAGGCAGCTTTCTCATTCAGATCCGTACCCTGGTGCTGACCTGTGTACTGTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
||
| 3UTR TCA 72 bp | CTGACAGCCACAGGCACAGTGATGCACACATGCGCCTaGCCCCATACATACACAACTATAACTTTTTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LTATGTVMHTCA*PHTYTTITFSH Trigger: ATGAGAAAAAGTTATAGTTGTGTATGTATGGGGTCAGGCGCATGTGTGCATCACTGTGCCTGTGGCTGTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR TCA 72 bp | GGCATTATATGTGACACCGCCAAGACTTCCAAAGCATaGGTAGACATGGCACTTAGAAGATCTTCGAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GIICDTAKTSKA*VDMALRRSSSW Trigger: CCAGCTCGAAGATCTTCTAAGTGCCATGTCTACTCATGCTTTGGAAGTCTTGGCGGTGTCACATATAATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR TCA 72 bp | CTCCTTTCTGTCCGATTCCAATTCTACAACTTGATCTaGGAACTTGACGGGATGGGGTCAGTATGTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LLSVRFQFYNLI*ELDGMGSVCLL Trigger: CAGGAGACATACTGACCCCATCCCGTCAAGTTCTCAGATCAAGTTGTAGAATTGGAATCGGACAGAAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR CCA 72 bp | GTGTGGACTTCAGACTGCCTACTGTCTGACAGGCACTaGGCCAGGCACTATCTTACAGTGATTAATAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: VWTSDCLLSDRH*ARHYLTVINKT Trigger: TGTTTTATTAATCACTGTAAGATAGTGCCTGGCCCAGTGCCTGTCAGACAGTAGGCAGTCTGAAGTCCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
||
| 3UTR TCA 72 bp | ACTGTAAGCAGTATGGAGGCAGATATAGGAAGACTGTaGCTTCTAGGCCAGCCTGGACTACATAGCAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: TVSSMEADIGRL*LLGQPGLHSKN Trigger: GTTTTTGCTATGTAGTCCAGGCTGGCCTAGAAGTCACAGTCTTCCTATATCTGCCTCCATACTGCTTACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR CCA 72 bp | GATCTCCAATTGGAATGCAGGATCCTCTGTTTCTTGTaGGCGCTCTTCTACTTCATCTCTCTAATGTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: DLQLECRILCFL*ALFYFISLMSE Trigger: CTCAGACATTAGAGAGATGAAGTAGAAGAGCGCCCACAAGAAACAGAGGATCCTGCATTCCAATTGGAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
||
| 3UTR CCA 72 bp | TTCATCCTCGGGTATGCAACAATTCTGAGGGCAGCCTaGGATACGCAAATGAATACAATGAAAGAAAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: FILGYATILRAA*DTQMNTMKENG Trigger: ACCATTTTCTTTCATTGTATTCATTTGCGTATCCCAGGCTGCCCTCAGAATTGTTGCATACCCGAGGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR-3UTR CAA 90 bp | CAAATGCAAGGTTCAAACATACTAAGAGCAAAACATCTGTTCATATGCCAAGGGACAGGGAGAGCCAGCTaGTTACAGCCTTTAGACTTA | + |
|
Preference number: 3 (lower is better) Translates to: QMQGSNILRAKHLFICQGTGRAS*LQPLDL Trigger: TAAGTCTAAAGGCTGTAACAAGCTGGCTCTCCCTGT...CCCTTGGCATATGAACAGATGTTTTGCTCTTAGTATGTTTGAACCTTGCATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
||
| 3UTR CCA 72 bp | AAAAATTCCACAAACCATGGTACAAGTTTAGATCAGTaGATAGCTTCCAGCTGTCAGGTTTTCCCTTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: KNSTNHGTSLDQ*IASSCQVFPST Trigger: GGTAGAAGGGAAAACCTGACAGCTGGAAGCTATCCACTGATCTAAACTTGTACCATGGTTTGTGGAATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR TCA 72 bp | GCCACAGGGACAACCAATGACATTATAACTCCAAGCTaGACCAAAGCAATACTTTTCTTATTAATCCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: ATGTTNDIITPS*TKAILFLLIPS Trigger: TGAGGGGATTAATAAGAAAAGTATTGCTTTGGTTCAGCTTGGAGTTATAATGTCATTGGTTGTCCCTGTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR GCA 72 bp | GGTTCAAACATACTAAGAGCAAAACATCTGTTCATATaGCAAGGGCCAAGGCTAGACAATGAATTAACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GSNILRAKHLFI*QGPRLDNELTL Trigger: AAGGGTTAATTCATTGTCTAGCCTTGGCCCTTGGCATATGAACAGATGTTTTGCTCTTAGTATGTTTGAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
||
| 3UTR CCA 72 bp | AGCCAGCTTGTTACAGCCTTTAGACTTAATCAAATATaGCTTCTGGAACATAGAGAAAGCCACTTACAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SQLVTAFRLNQI*LLEHRESHLQK Trigger: TTTTTGTAAGTGGCTTTCTCTATGTTCCAGAAGCCATATTTGATTAAGTCTAAAGGCTGTAACAAGCTGGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
||
| 3UTR CAA 72 bp | GCCGCACATGTGCAGAGCTATCCTGTGCACTGCTGCTaGCACACACAGGGGTATCCACCATACCTCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AAHVQSYPVHCC*HTQGYPPYLQR Trigger: TCTCTGGAGGTATGGTGGATACCCCTGTGTGTGCAAGCAGCAGTGCACAGGATAGCTCTGCACATGTGCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| CDS-3UTR CCA 90 bp | AATGGCTTGGTAGGGAAGCCTGGTCCATGCCTGATGCCCCTCAGGTTCAATTGCAAGTCTCGGGCTTTCTaGACGAGCCCAACTCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NGLVGKPGPCLMPLRFNCKSRAF*TSPTRS Trigger: TGACCGAGTTGGGCTCGTCCAGAAAGCCCGAGACTT...GCAATTGAACCTGAGGGGCATCAGGCATGGACCAGGCTTCCCTACCAAGCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| 3UTR CAA 72 bp | ATGGCACTTAGAAGATCTTCGAGCTGGTGGAATGGCTaGGTAGGGAAGCCTGGTCCATGCCTGATGCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: MALRRSSSWWNG*VGKPGPCLMPL Trigger: GAGGGGCATCAGGCATGGACCAGGCTTCCCTACCAAGCCATTCCACCAGCTCGAAGATCTTCTAAGTGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| CDS-3UTR GCA 90 bp | GCCGCACATGTGCAGAGCTATCCTGTGCACTGCTGCTTGCACACACAGGGGTATCTCATAATAGGCATCTaGTCCTCCCGTTGCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: AAHVQSYPVHCCLHTQGYLIIGI*SSRCHK Trigger: CTTGTGGCAACGGGAGGAGCAGATGCCTATTATGAG...ATACCCCTGTGTGTGCAAGCAGCAGTGCACAGGATAGCTCTGCACATGTGCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| CDS-3UTR CCA 90 bp | GCATTAGAGGCAGCAGCTGCAGCTTCGAGCACGCATTGTCAGGTGTGGACTTCAACACTCCGGATTCCATaGATGGGGATGGAACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALEAAAAASSTHCQVWTSTLRIP*MGMEHS Trigger: GCTGTGTTCCATCCCCATCCATGGAATCCGGAGTGT...TGAAGTCCACACCTGACAATGCGTGCTCGAAGCTGCAGCTGCTGCCTCTAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
||
| CDS-3UTR TCA 90 bp | TTAGAGGCAGCAGCTGCAGCTTCGAGCACGCATTGTCAGGTGTGGACTTCAGACCTCGGTCACCAAGAGTaGCTTGGTAATGTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEAAAAASSTHCQVWTSDLGHQE*LGNVFL Trigger: CAGGAAGACATTACCAAGTCACTCTTGGTGACCGAG...GTCTGAAGTCCACACCTGACAATGCGTGCTCGAAGCTGCAGCTGCTGCCTCTAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
||
| 3UTR CAA 72 bp | TTTAATTCCACGTGTGTTCATGGGCTGGAGCGCAGCTaGGGCAGCAGAGTGCTTACGCTAAGTACACGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FNSTCVHGLERS*GSRVLTLSTRV Trigger: CACACGTGTACTTAGCGTAAGCACTCTGCTGCCCAAGCTGCGCTCCAGCCCATGAACACACGTGGAATTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| CDS-3UTR CCA 90 bp | GCCGCACATGTGCAGAGCTATCCTGTGCACTGCTGCTTGCACACACAGGGGTATTTCCATGGATGGGGATaGAACACAGCTTTTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: AAHVQSYPVHCCLHTQGYFHGWG*NTAFPC Trigger: ACATGGAAAAGCTGTGTTCCATCCCCATCCATGGAA...ATACCCCTGTGTGTGCAAGCAGCAGTGCACAGGATAGCTCTGCACATGTGCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| CDS-3UTR TCA 90 bp | GCATTAGAGGCAGCAGCTGCAGCTTCGAGCACGCATTGTCAGGTGTGGACTTCACAGACTCTTCACCAATaGAGCTGTGACATGGATACT | + |
|
Preference number: 4 (lower is better) Translates to: ALEAAAAASSTHCQVWTSQTLHQ*SCDMDT Trigger: AGTATCCATGTCACAGCTTCATTGGTGAAGAGTCTG...TGAAGTCCACACCTGACAATGCGTGCTCGAAGCTGCAGCTGCTGCCTCTAATGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
||
| CDS-3UTR TCA 90 bp | GCATTAGAGGCAGCAGCTGCAGCTTCGAGCACGCATTGTCAGGTGTGGACTTCACACAAGGAAGCCAATTaGAACAGCTACAAAGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ALEAAAAASSTHCQVWTSHKEAN*NSYKGK Trigger: TTTCCCTTTGTAGCTGTTTCAATTGGCTTCCTTGTG...TGAAGTCCACACCTGACAATGCGTGCTCGAAGCTGCAGCTGCTGCCTCTAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
||
| CDS-3UTR GCA 90 bp | ATCAGTGACACCATCCATCTGAAACACCCCAGGGACAGCAAGGATGACACTGGAATCTGCTCCTCCCGTTaGCACAAGGCACATATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ISDTIHLKHPRDSKDDTGICSSR*HKAHIN Trigger: GTTAATATGTGCCTTGTGGCAACGGGAGGAGCAGAT...TCCAGTGTCATCCTTGCTGTCCCTGGGGTGTTTCAGATGGATGGTGTCACTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 ENSMUST00000191670.6 |
||
| CDS-3UTR CCA 90 bp | AATGGCTTGGTAGGGAAGCCTGGTCCATGCCTGATGCCCCTCAGGTTCAATTGCACAGCTTTTCCATGTTaGAGAGAACGATCCGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NGLVGKPGPCLMPLRFNCTAFPC*RERSVK Trigger: CTTTACGGATCGTTCTCTCCAACATGGAAAAGCTGT...GCAATTGAACCTGAGGGGCATCAGGCATGGACCAGGCTTCCCTACCAAGCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| CDS-3UTR CCA 90 bp | GGGACAGAAAGCCGACATCTCCCTCCTCTAAATACCATCAGGATTTTGATCAGGACACTCCGGATTCCATaGATGGGGATGGAACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTESRHLPPLNTIRILIRTLRIP*MGMEHS Trigger: GCTGTGTTCCATCCCCATCCATGGAATCCGGAGTGT...CCTGATCAAAATCCTGATGGTATTTAGAGGAGGGAGATGTCGGCTTTCTGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| CDS-3UTR CCA 90 bp | GGTTTTCCCTTCTACCTTGTGAACCCCAGGGATCAACCTCAGGTTGTCAGACTTTCCGGATTCCATGGATaGGGATGGAACACAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GFPFYLVNPRDQPQVVRLSGFHG*GWNTAF Trigger: AAAAGCTGTGTTCCATCCCCATCCATGGAATCCGGA...AAGTCTGACAACCTGAGGTTGATCCCTGGGGTTCACAAGGTAGAAGGGAAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
||
| CDS-3UTR CCA 90 bp | CTGCCACTAACTAGACCAGGTACCTGGAAGATGTCTGTGAAAATCTCTTTAGCAGCCCTGCATGCTTTGTaGTGGCATGATCTCACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPLTRPGTWKMSVKISLAALHAL*WHDLTR Trigger: ACGGGTGAGATCATGCCACCACAAAGCATGCAGGGC...TGCTAAAGAGATTTTCACAGACATCTTCCAGGTACCTGGTCTAGTTAGTGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGCTGGACACTGTTCTCTGTGACTAGCTTTCGTCGTCTCTTTGCAAAGGTAATCTGCTCCTCCCGTTaGCACAAGGCACATATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: WSWTLFSVTSFRRLFAKVICSSR*HKAHIN Trigger: GTTAATATGTGCCTTGTGGCAACGGGAGGAGCAGAT...TACCTTTGCAAAGAGACGACGAAAGCTAGTCACAGAGAACAGTGTCCAGCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118410.8 ENSMUST00000191670.6 |
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| CDS-3UTR TCA 90 bp | ATCAGTGACACCATCCATCTGAAACACCCCAGGGACAGCAAGGATGACACTGGATCACCAATGAAGCTGTaGCATGGATACTTTTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: ISDTIHLKHPRDSKDDTGSPMKL*HGYFSF Trigger: AAAGGAAAAGTATCCATGTCACAGCTTCATTGGTGA...TCCAGTGTCATCCTTGCTGTCCCTGGGGTGTTTCAGATGGATGGTGTCACTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 ENSMUST00000191670.6 |
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| CDS-3UTR CCA 90 bp | TATAAAAAGGACAGTGAAGTAACTTCTACCTCGCAACAGGAGGGTGGTTATCTTAAGTCTCGGGCTTTCTaGACGAGCCCAACTCGGTCA | + |
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Preference number: 4 (lower is better) Translates to: YKKDSEVTSTSQQEGGYLKSRAF*TSPTRS Trigger: TGACCGAGTTGGGCTCGTCCAGAAAGCCCGAGACTT...AAGATAACCACCCTCCTGTTGCGAGGTAGAAGTTACTTCACTGTCCTTTTTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| CDS-3UTR GCA 90 bp | CTGCCACTAACTAGACCAGGTACCTGGAAGATGTCTGTGAAAATCTCTTTAGCAATCTGCTCCTCCCGTTaGCACAAGGCACATATTAAC | + |
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Preference number: 4 (lower is better) Translates to: LPLTRPGTWKMSVKISLAICSSR*HKAHIN Trigger: GTTAATATGTGCCTTGTGGCAACGGGAGGAGCAGAT...TGCTAAAGAGATTTTCACAGACATCTTCCAGGTACCTGGTCTAGTTAGTGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| CDS-3UTR CCA 90 bp | CTGCCACTAACTAGACCAGGTACCTGGAAGATGTCTGTGAAAATCTCTTTAGCATCCGGATTCCATGGATaGGGATGGAACACAGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: LPLTRPGTWKMSVKISLASGFHG*GWNTAF Trigger: AAAAGCTGTGTTCCATCCCCATCCATGGAATCCGGA...TGCTAAAGAGATTTTCACAGACATCTTCCAGGTACCTGGTCTAGTTAGTGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| 3UTR CAA 72 bp | AGCCGACATCTCCCTCCTCTAAATACCATCAGGATTTaGATCAGGAAGGCATTATATGTGACACCGCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: SRHLPPLNTIRI*IRKALYVTPPR Trigger: TCTTGGCGGTGTCACATATAATGCCTTCCTGATCAAAATCCTGATGGTATTTAGAGGAGGGAGATGTCGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| 3UTR CAA 72 bp | AGCGATCTCCAATTGGAATGCAGGATCCTCTGTTTCTaGTGGGCGCTCTTCTACTTCATCTCTCTAATGTCT | + |
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Preference number: 4 (lower is better) Translates to: SDLQLECRILCF*WALFYFISLMS Trigger: AGACATTAGAGAGATGAAGTAGAAGAGCGCCCACAAGAAACAGAGGATCCTGCATTCCAATTGGAGATCGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| CDS-3UTR GCA 90 bp | TATAAAAAGGACAGTGAAGTAACTTCTACCTCGCAACAGGAGGGTGGTTATCTTCTCATAATAGGCATCTaGTCCTCCCGTTGCCACAAG | + |
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Preference number: 4 (lower is better) Translates to: YKKDSEVTSTSQQEGGYLLIIGI*SSRCHK Trigger: CTTGTGGCAACGGGAGGAGCAGATGCCTATTATGAG...AAGATAACCACCCTCCTGTTGCGAGGTAGAAGTTACTTCACTGTCCTTTTTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| CDS-3UTR TCA 90 bp | CAAATGCAAGGTTCAAACATACTAAGAGCAAAACATCTGTTCATATGCCAAGGGCTCGGTCACCAAGAGTaGCTTGGTAATGTCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QMQGSNILRAKHLFICQGLGHQE*LGNVFL Trigger: CAGGAAGACATTACCAAGTCACTCTTGGTGACCGAG...CCCTTGGCATATGAACAGATGTTTTGCTCTTAGTATGTTTGAACCTTGCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| CDS-3UTR GCA 90 bp | AATCCCCTCAGAGAAACTGTCAATGGGACAGAAAGCCGACATCTCCCTCCTCTACTTTCGTCGTCTCTTTaGAAAGGTATTATCTCAATT | + |
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Preference number: 4 (lower is better) Translates to: NPLRETVNGTESRHLPPLLSSSL*KGIISI Trigger: AATTGAGATAATACCTTTGCAAAGAGACGACGAAAG...TAGAGGAGGGAGATGTCGGCTTTCTGTCCCATTGACAGTTTCTCTGAGGGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| CDS-3UTR CCA 90 bp | GTTATACTATTTGCGGCAATTATTCTCCGAGACATCAGATCGAACGGTCCACCTACAGCTTTTCCATGTTaGAGAGAACGATCCGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VILFAAIILRDIRSNGPPTAFPC*RERSVK Trigger: CTTTACGGATCGTTCTCTCCAACATGGAAAAGCTGT...AGGTGGACCGTTCGATCTGATGTCTCGGAGAATAATTGCCGCAAATAGTATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| CDS-3UTR TCA 90 bp | TGGACACTGTTCTCTGTGACTAGCTTTCGTCGTCTCTTTGCAAAGGTATTATCTCACAAGGAAGCCAATTaGAACAGCTACAAAGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WTLFSVTSFRRLFAKVLSHKEAN*NSYKGK Trigger: TTTCCCTTTGTAGCTGTTTCAATTGGCTTCCTTGTG...AGATAATACCTTTGCAAAGAGACGACGAAAGCTAGTCACAGAGAACAGTGTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118410.8 ENSMUST00000191670.6 |
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| CDS-3UTR TCA 90 bp | CAAATGCAAGGTTCAAACATACTAAGAGCAAAACATCTGTTCATATGCCAAGGGCCATCTGCTAACGTCTaGTTTTGCAGAGACTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: QMQGSNILRAKHLFICQGPSANV*FCRDSH Trigger: GTGTGAGTCTCTGCAAAATCAGACGTTAGCAGATGG...CCCTTGGCATATGAACAGATGTTTTGCTCTTAGTATGTTTGAACCTTGCATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| CDS-3UTR TCA 90 bp | CAAATGCAAGGTTCAAACATACTAAGAGCAAAACATCTGTTCATATGCCAAGGGCAGACTCTTCACCAATaGAGCTGTGACATGGATACT | + |
|
Preference number: 4 (lower is better) Translates to: QMQGSNILRAKHLFICQGQTLHQ*SCDMDT Trigger: AGTATCCATGTCACAGCTTCATTGGTGAAGAGTCTG...CCCTTGGCATATGAACAGATGTTTTGCTCTTAGTATGTTTGAACCTTGCATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| 3UTR CAA 72 bp | GTTTCAGTGTGCTGTATCTCATGGTTTCTGAACTCTTaGAACCCCGGTTTATTCTCCTTAATTTCACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VSVCCISWFLNS*NPGLFSLISPS Trigger: AGAAGGTGAAATTAAGGAGAATAAACCGGGGTTCAAAGAGTTCAGAAACCATGAGATACAGCACACTGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| CDS-3UTR TCA 90 bp | TTCTCTGTGACTAGCTTTCGTCGTCTCTTTGCAAAGGTATTATCTCAATTTCTTCACAAGGAAGCCAATTaGAACAGCTACAAAGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSVTSFRRLFAKVLSQFLHKEAN*NSYKGK Trigger: TTTCCCTTTGTAGCTGTTTCAATTGGCTTCCTTGTG...AAGAAATTGAGATAATACCTTTGCAAAGAGACGACGAAAGCTAGTCACAGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118410.8 ENSMUST00000191670.6 |
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| CDS-3UTR TCA 90 bp | TTCTCTGTGACTAGCTTTCGTCGTCTCTTTGCAAAGGTATTATCTCAATTTCTTTCACCAATGAAGCTGTaGCATGGATACTTTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSVTSFRRLFAKVLSQFLSPMKL*HGYFSF Trigger: AAAGGAAAAGTATCCATGTCACAGCTTCATTGGTGA...AAGAAATTGAGATAATACCTTTGCAAAGAGACGACGAAAGCTAGTCACAGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118410.8 ENSMUST00000191670.6 |
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| 3UTR CAA 72 bp | TTTCTTTGGCTATTCTTTTGGCTAATGTTATACTATTaGCGGCAATTATTCTCCGAGACATCAGATCGAACG | + |
|
Preference number: 4 (lower is better) Translates to: FLWLFFWLMLYY*RQLFSETSDRT Trigger: CGTTCGATCTGATGTCTCGGAGAATAATTGCCGCAAATAGTATAACATTAGCCAAAAGAATAGCCAAAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| CDS-3UTR TCA 90 bp | AATTATGCATATAAACAGTACATTAAGTTGAAGGGGATCATAAGGACTAGGGACTCACCAATGAAGCTGTaGCATGGATACTTTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NYAYKQYIKLKGIIRTRDSPMKL*HGYFSF Trigger: AAAGGAAAAGTATCCATGTCACAGCTTCATTGGTGA...GTCCCTAGTCCTTATGATCCCCTTCAACTTAATGTACTGTTTATATGCATAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 ENSMUST00000191670.6 |
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| CDS CCA 90 bp | CAGAGACTCACACACATCAAGGAGAGAGCCCTGCATGCTTTGTGGTaGCATGATCTCACCCGTGACATCCATGAGCACTCCGCCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QRLTHIKERALHALW*HDLTRDIHEHSACL Trigger: GAGGCAGGCGGAGTGCTCATGGATGTCACGGGTGAGATCATGCCACCACAAAGCATGCAGGGCTCTCTCCTTGATGTGTGTGAGTCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| CDS CCA 90 bp | CACTCCGGATTCCATGGATGGGGATGGAACACAGCTTTTCCATGTTaGAGAGAACGATCCGTAAAGTCTCGGGCTTTCTGGACGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HSGFHGWGWNTAFPC*RERSVKSRAFWTSP Trigger: TGGGCTCGTCCAGAAAGCCCGAGACTTTACGGATCGTTCTCTCCAACATGGAAAAGCTGTGTTCCATCCCCATCCATGGAATCCGGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| CDS-3UTR CAA 90 bp | AATGGCTTGGTAGGGAAGCCTGGTCCATGCCTGATGCCCCTCAGGTTCAATTGCGTCACCAAGAGTGACTaGGTAATGTCTTCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NGLVGKPGPCLMPLRFNCVTKSD*VMSSCW Trigger: CCAGCAGGAAGACATTACCAAGTCACTCTTGGTGAC...GCAATTGAACCTGAGGGGCATCAGGCATGGACCAGGCTTCCCTACCAAGCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| CDS-3UTR CAA 90 bp | CTGTGCAGTCTCCAGCACCACAGAAACTGTGTGTGGTGGCCTGTGGCCATCTTCCACAGCTTTTCCATGTaGGAGAGAACGATCCGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LCSLQHHRNCVWWPVAIFHSFSM*ERTIRK Trigger: TTTACGGATCGTTCTCTCCAACATGGAAAAGCTGTG...GAAGATGGCCACAGGCCACCACACACAGTTTCTGTGGTGCTGGAGACTGCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| CDS TCA 90 bp | TATGTAGTAGCACTAGCCACACCACTGTCTCCATCTGCTAACGTCTaGTTTTGCAGAGACTCACACACATCAAGGAGAGAGCCCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: YVVALATPLSPSANV*FCRDSHTSRREPCM Trigger: CATGCAGGGCTCTCTCCTTGATGTGTGTGAGTCTCTGCAAAATCAGACGTTAGCAGATGGAGACAGTGGTGTGGCTAGTGCTACTACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| CDS-3UTR CAA 90 bp | AATGGCTTGGTAGGGAAGCCTGGTCCATGCCTGATGCCCCTCAGGTTCAATTGCCTAATGTTATACTATTaGCGGCAATTATTCTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: NGLVGKPGPCLMPLRFNCLMLYY*RQLFSE Trigger: CTCGGAGAATAATTGCCGCAAATAGTATAACATTAG...GCAATTGAACCTGAGGGGCATCAGGCATGGACCAGGCTTCCCTACCAAGCCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| CDS-3UTR CAA 90 bp | TATAAAAAGGACAGTGAAGTAACTTCTACCTCGCAACAGGAGGGTGGTTATCTTAGAGCCCTGCATGCTTaGTGGTGGCATGATCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: YKKDSEVTSTSQQEGGYLRALHA*WWHDLT Trigger: GGTGAGATCATGCCACCACAAAGCATGCAGGGCTCT...AAGATAACCACCCTCCTGTTGCGAGGTAGAAGTTACTTCACTGTCCTTTTTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| CDS-3UTR CAA 90 bp | AATTATGCATATAAACAGTACATTAAGTTGAAGGGGATCATAAGGACTAGGGACGTCACCAAGAGTGACTaGGTAATGTCTTCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NYAYKQYIKLKGIIRTRDVTKSD*VMSSCW Trigger: CCAGCAGGAAGACATTACCAAGTCACTCTTGGTGAC...GTCCCTAGTCCTTATGATCCCCTTCAACTTAATGTACTGTTTATATGCATAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| CDS-3UTR CAA 90 bp | TTCTCTGTGACTAGCTTTCGTCGTCTCTTTGCAAAGGTATTATCTCAATTTCTTCACAGCTTTTCCATGTaGGAGAGAACGATCCGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: FSVTSFRRLFAKVLSQFLHSFSM*ERTIRK Trigger: TTTACGGATCGTTCTCTCCAACATGGAAAAGCTGTG...AAGAAATTGAGATAATACCTTTGCAAAGAGACGACGAAAGCTAGTCACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| CDS-3UTR CAA 90 bp | CAAATGCAAGGTTCAAACATACTAAGAGCAAAACATCTGTTCATATGCCAAGGGGCTTTCGTCGTCTCTTaGCAAAGGTATTATCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: QMQGSNILRAKHLFICQGAFVVS*QRYYLN Trigger: ATTGAGATAATACCTTTGCAAAGAGACGACGAAAGC...CCCTTGGCATATGAACAGATGTTTTGCTCTTAGTATGTTTGAACCTTGCATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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| CDS GCA 72 bp | GAACGGTCCACCCGTGACATCCATGAGCACTCCGCCTaGCTCGGTGACAATGATGCCAGCTCCCGCCATGTC | + |
|
Preference number: 6 (lower is better) Translates to: ERSTRDIHEHSA*LGDNDASSRHV Trigger: GACATGGCGGGAGCTGGCATCATTGTCACCGAGGCAGGCGGAGTGCTCATGGATGTCACGGGTGGACCGTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000191670.6 |
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| CDS GCA 72 bp | CATGATCTCACCCGTGACATCCATGAGCACTCCGCCTaGCTCGGTGACAATGATGCCAGCTCCCGCCATGTC | + |
|
Preference number: 6 (lower is better) Translates to: HDLTRDIHEHSA*LGDNDASSRHV Trigger: GACATGGCGGGAGCTGGCATCATTGTCACCGAGGCAGGCGGAGTGCTCATGGATGTCACGGGTGAGATCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| CDS CCA 72 bp | ACACACATCAAGGAGAGAGCCCTGCATGCTTTGTGGTaGCATGATCTCACCCGTGACATCCATGAGCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: THIKERALHALW*HDLTRDIHEHS Trigger: GGAGTGCTCATGGATGTCACGGGTGAGATCATGCCACCACAAAGCATGCAGGGCTCTCTCCTTGATGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| CDS CAA 90 bp | ACACTCCGGATTCCATGGATGGGGATGGAACACAGCTTTTCCATGTaGGAGAGAACGATCCGTAAAGTCTCGGGCTTTCTGGACGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TLRIPWMGMEHSFSM*ERTIRKVSGFLDEP Trigger: GGGCTCGTCCAGAAAGCCCGAGACTTTACGGATCGTTCTCTCCAACATGGAAAAGCTGTGTTCCATCCCCATCCATGGAATCCGGAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| CDS CAA 72 bp | AGACTCACACACATCAAGGAGAGAGCCCTGCATGCTTaGTGGTGGCATGATCTCACCCGTGACATCCATGAG | + |
|
Preference number: 6 (lower is better) Translates to: RLTHIKERALHA*WWHDLTRDIHE Trigger: CTCATGGATGTCACGGGTGAGATCATGCCACCACAAAGCATGCAGGGCTCTCTCCTTGATGTGTGTGAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| CDS GCA 72 bp | TTTTGCAGAGACTCACACACATCAAGGAGAGAGCCCTaGATGCTTTGTGGTGGCATGATCTCACCCGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: FCRDSHTSRREP*MLCGGMISPVT Trigger: TGTCACGGGTGAGATCATGCCACCACAAAGCATGCAGGGCTCTCTCCTTGATGTGTGTGAGTCTCTGCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| CDS CCA 72 bp | CAGCTGTTCCAACACTCCGGATTCCATGGATGGGGATaGAACACAGCTTTTCCATGTTGGAGAGAACGATCC | + |
|
Preference number: 6 (lower is better) Translates to: QLFQHSGFHGWG*NTAFPCWRERS Trigger: GGATCGTTCTCTCCAACATGGAAAAGCTGTGTTCCATCCCCATCCATGGAATCCGGAGTGTTGGAACAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| CDS TCA 72 bp | GCACTAGCCACACCACTGTCTCCATCTGCTAACGTCTaGTTTTGCAGAGACTCACACACATCAAGGAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ALATPLSPSANV*FCRDSHTSRRE Trigger: CTCTCTCCTTGATGTGTGTGAGTCTCTGCAAAATCAGACGTTAGCAGATGGAGACAGTGGTGTGGCTAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118410.8 |
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| CDS CCA 72 bp | TTCCATGGATGGGGATGGAACACAGCTTTTCCATGTTaGAGAGAACGATCCGTAAAGTCTCGGGCTTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FHGWGWNTAFPC*RERSVKSRAFW Trigger: CCAGAAAGCCCGAGACTTTACGGATCGTTCTCTCCAACATGGAAAAGCTGTGTTCCATCCCCATCCATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| CDS CAA 72 bp | ATTCCATGGATGGGGATGGAACACAGCTTTTCCATGTaGGAGAGAACGATCCGTAAAGTCTCGGGCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: IPWMGMEHSFSM*ERTIRKVSGFL Trigger: CAGAAAGCCCGAGACTTTACGGATCGTTCTCTCCAACATGGAAAAGCTGTGTTCCATCCCCATCCATGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065938.15 ENSMUST00000118410.8 |
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| CDS CAA 90 bp | TTATCTCAATTTCTTTGGCTATTCTTTTGGCTAATGTTATACTATTaGCGGCAATTATTCTCCGAGACATCAGATCGAACGGTCCACCCG | + |
|
Preference number: 6 (lower is better) Translates to: LSQFLWLFFWLMLYY*RQLFSETSDRTVHP Trigger: CGGGTGGACCGTTCGATCTGATGTCTCGGAGAATAATTGCCGCAAATAGTATAACATTAGCCAAAAGAATAGCCAAAGAAATTGAGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065938.15 |
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