Pregenerated sensors for IMMP2L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056899Ensembl transcript IDs: ENSMUST00000080160.4, ENSMUST00000132121.8, ENSMUST00000134965.8
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ATATGGAAATTCCAGACAACCTTAAAGATATACAGAGGTCTTGTGTTCAGCATCCCAGAAGGAGGCATCTaGTGTGTTCAGCTCCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: IWKFQTTLKIYRGLVFSIPEGGI*CVQLLL Trigger: TAGGAGGAGCTGAACACACCAGATGCCTCCTTCTGG...GATGCTGAACACAAGACCTCTGTATATCTTTAAGGTTGTCTGGAATTTCCATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| 3UTR-3UTR TCA 90 bp | TTATCACGGTTTCTGGTCCTTCCTAACTGGCAGTCACTATTCTGTGGATATCTTAATTTTAAAATTCGTTaGGCAGCAGGCTTCACAGAA | + |
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Preference number: 2 (lower is better) Translates to: LSRFLVLPNWQSLFCGYLNFKIR*AAGFTE Trigger: TTCTGTGAAGCCTGCTGCTCAACGAATTTTAAAATT...AAGATATCCACAGAATAGTGACTGCCAGTTAGGAAGGACCAGAAACCGTGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132121.8 |
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| 3UTR CCA 72 bp | GCATCACTGGAACATCTCCCTCCAGAAGGAGGCATCTaGTGTGTTCAGCTCCTCCTATGGTGGGCTCTTGTG | + |
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Preference number: 3 (lower is better) Translates to: ASLEHLPPEGGI*CVQLLLWWALV Trigger: CACAAGAGCCCACCATAGGAGGAGCTGAACACACCAGATGCCTCCTTCTGGAGGGAGATGTTCCAGTGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| 3UTR CCA 72 bp | CTTAAAGATATACAGAGGTCTTGTGTTCAGCATCACTaGAACATCTCCCTCCAGAAGGAGGCATCTGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: LKDIQRSCVQHH*NISLQKEASGV Trigger: CACACCAGATGCCTCCTTCTGGAGGGAGATGTTCCAGTGATGCTGAACACAAGACCTCTGTATATCTTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| 3UTR-3UTR CAA 90 bp | ATGGTTGTTTTATTTTATCACGGTTTCTGGTCCTTCCTAACTGGCAGTCACTATAGATATACAGAGGTCTaGTGTTCAGCATCACTGGAA | + |
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Preference number: 3 (lower is better) Translates to: MVVLFYHGFWSFLTGSHYRYTEV*CSASLE Trigger: TTCCAGTGATGCTGAACACAAGACCTCTGTATATCT...ATAGTGACTGCCAGTTAGGAAGGACCAGAAACCGTGATAAAATAAAACAACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132121.8 |
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| 3UTR CCA 72 bp | TGTTTTATTTTATCACGGTTTCTGGTCCTTCCTAACTaGCAGTCACTATTCTGTGGATATCTTCAATTACAA | + |
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Preference number: 3 (lower is better) Translates to: CFILSRFLVLPN*QSLFCGYLQLQ Trigger: TTGTAATTGAAGATATCCACAGAATAGTGACTGCCAGTTAGGAAGGACCAGAAACCGTGATAAAATAAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132121.8 |
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| CDS-3UTR TCA 90 bp | ATCTCCCTCCAGAAGGAGGCATCTGGTGTGTTCAGCTCCTCCTATGGTGGGCTCCGCGATCCAAGAAAGTaGCTGCCACGGGCACCGCCA | + |
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Preference number: 4 (lower is better) Translates to: ISLQKEASGVFSSSYGGLRDPRK*LPRAPP Trigger: TGGCGGTGCCCGTGGCAGTCACTTTCTTGGATCGCG...GAGCCCACCATAGGAGGAGCTGAACACACCAGATGCCTCCTTCTGGAGGGAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR TCA 90 bp | GGTCTTGTGTTCAGCATCACTGGAACATCTCCCTCCAGAAGGAGGCATCTGGTGCGCGATCCAAGAAAGTaGCTGCCACGGGCACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLVFSITGTSPSRRRHLVRDPRK*LPRAPP Trigger: TGGCGGTGCCCGTGGCAGTCACTTTCTTGGATCGCG...CACCAGATGCCTCCTTCTGGAGGGAGATGTTCCAGTGATGCTGAACACAAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR TCA 90 bp | TCTCCCTCCAGAAGGAGGCATCTGGTGTGTTCAGCTCCTCCTATGGTGGGCTCTCAAAGAAGGCTGCATTaGCGAGCCTTCCACCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: SPSRRRHLVCSAPPMVGSQRRLH*RAFHPS Trigger: GCTCGGGTGGAAGGCTCGTCAATGCAGCCTTCTTTG...AGAGCCCACCATAGGAGGAGCTGAACACACCAGATGCCTCCTTCTGGAGGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR TCA 90 bp | AACATCTCCCTCCAGAAGGAGGCATCTGGTGTGTTCAGCTCCTCCTATGGTGGGGACCGCGGGGGACTTTaGCCAACCGGTTTTTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: NISLQKEASGVFSSSYGGDRGGL*PTGFCV Trigger: GACACAAAAACCGGTTGGTCAAAGTCCCCCGCGGTC...CCCACCATAGGAGGAGCTGAACACACCAGATGCCTCCTTCTGGAGGGAGATGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR TCA 90 bp | GCATCACTGGAACATCTCCCTCCAGAAGGAGGCATCTGGTGTGTTCAGCTCCTCGACCGCGGGGGACTTTaGCCAACCGGTTTTTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: ASLEHLPPEGGIWCVQLLDRGGL*PTGFCV Trigger: GACACAAAAACCGGTTGGTCAAAGTCCCCCGCGGTC...GAGGAGCTGAACACACCAGATGCCTCCTTCTGGAGGGAGATGTTCCAGTGATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR TCA 90 bp | GGTCTTGTGTTCAGCATCACTGGAACATCTCCCTCCAGAAGGAGGCATCTGGTGCCTTCAACCCACATGTaGCCGCGGGGGACTTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: GLVFSITGTSPSRRRHLVPSTHM*PRGTLT Trigger: GGTCAAAGTCCCCCGCGGTCACATGTGGGTTGAAGG...CACCAGATGCCTCCTTCTGGAGGGAGATGTTCCAGTGATGCTGAACACAAGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR CCA 90 bp | CCTCCAGAAGGAGGCATCTGGTGTGTTCAGCTCCTCCTATGGTGGGCTCTTGTGGAGTGGACAGCGCTCTaGAGGAAGAACAGATTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PPEGGIWCVQLLLWWALVEWTAL*RKNRFQ Trigger: CTGGAATCTGTTCTTCCTCCAGAGCGCTGTCCACTC...CACAAGAGCCCACCATAGGAGGAGCTGAACACACCAGATGCCTCCTTCTGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR TCA 90 bp | GCATCACTGGAACATCTCCCTCCAGAAGGAGGCATCTGGTGTGTTCAGCTCCTCCAAAAGTACCACATCTaGGGACTGGCTTCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ASLEHLPPEGGIWCVQLLQKYHI*GLASSR Trigger: CCTGGAGGAAGCCAGTCCTCAGATGTGGTACTTTTG...GAGGAGCTGAACACACCAGATGCCTCCTTCTGGAGGGAGATGTTCCAGTGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR GCA 90 bp | AGAGGTCTTGTGTTCAGCATCACTGGAACATCTCCCTCCAGAAGGAGGCATCTGACAGATTCCAGTCTCTaGCAGCGCTCTGGAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RGLVFSITGTSPSRRRHLTDSSL*QRSGGH Trigger: GTGGCCTCCAGAGCGCTGGCAGAGACTGGAATCTGT...CAGATGCCTCCTTCTGGAGGGAGATGTTCCAGTGATGCTGAACACAAGACCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR GCA 90 bp | AGAGGTCTTGTGTTCAGCATCACTGGAACATCTCCCTCCAGAAGGAGGCATCTGTGTGTGGCATGGGCATaGAGGAGTCCCAGAGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: RGLVFSITGTSPSRRRHLCVAWA*RSPRET Trigger: GGTTTCTCTGGGACTCCTGCATGCCCATGCCACACA...CAGATGCCTCCTTCTGGAGGGAGATGTTCCAGTGATGCTGAACACAAGACCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR CCA 90 bp | TCCAGAAGGAGGCATCTGGTGTGTTCAGCTCCTCCTATGGTGGGCTCTTGTGCATCTCTGCCAGCGCTCTaGAGGCCACAAAATATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRRRHLVCSAPPMVGSCASLPAL*RPQNMC Trigger: ACACATATTTTGTGGCCTCCAGAGCGCTGGCAGAGA...TGCACAAGAGCCCACCATAGGAGGAGCTGAACACACCAGATGCCTCCTTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR GCA 90 bp | GGTCTTGTGTTCAGCATCACTGGAACATCTCCCTCCAGAAGGAGGCATCTGGTGGGATTCAAAGAAGGCTaGATTGACGAGCCTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GLVFSITGTSPSRRRHLVGFKEG*IDEPST Trigger: GGTGGAAGGCTCGTCAATGCAGCCTTCTTTGAATCC...CACCAGATGCCTCCTTCTGGAGGGAGATGTTCCAGTGATGCTGAACACAAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR CCA 90 bp | GGTCTTGTGTTCAGCATCACTGGAACATCTCCCTCCAGAAGGAGGCATCTGGTGTCTCTGCCAGCGCTCTaGAGGCCACAAAATATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLVFSITGTSPSRRRHLVSLPAL*RPQNMC Trigger: ACACATATTTTGTGGCCTCCAGAGCGCTGGCAGAGA...CACCAGATGCCTCCTTCTGGAGGGAGATGTTCCAGTGATGCTGAACACAAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR CCA 90 bp | GAGGTCTTGTGTTCAGCATCACTGGAACATCTCCCTCCAGAAGGAGGCATCTGGTATTTCTCACCAGTCTaGAGTGGACAGCGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EVLCSASLEHLPPEGGIWYFSPV*SGQRSG Trigger: TCCAGAGCGCTGTCCACTCCAGACTGGTGAGAAATA...CCAGATGCCTCCTTCTGGAGGGAGATGTTCCAGTGATGCTGAACACAAGACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR TCA 90 bp | GGTCTTGTGTTCAGCATCACTGGAACATCTCCCTCCAGAAGGAGGCATCTGGTGTTTAGGAGACACCAATaGCACAATGTCACCACGCTG | + |
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Preference number: 4 (lower is better) Translates to: GLVFSITGTSPSRRRHLVFRRHQ*HNVTTL Trigger: CAGCGTGGTGACATTGTGTCATTGGTGTCTCCTAAA...CACCAGATGCCTCCTTCTGGAGGGAGATGTTCCAGTGATGCTGAACACAAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR TCA 90 bp | AGAGGTCTTGTGTTCAGCATCACTGGAACATCTCCCTCCAGAAGGAGGCATCTGTTTAGGAGACACCAATaGCACAATGTCACCACGCTG | + |
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Preference number: 4 (lower is better) Translates to: RGLVFSITGTSPSRRRHLFRRHQ*HNVTTL Trigger: CAGCGTGGTGACATTGTGTCATTGGTGTCTCCTAAA...CAGATGCCTCCTTCTGGAGGGAGATGTTCCAGTGATGCTGAACACAAGACCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR CCA 90 bp | TCTTGTGTTCAGCATCACTGGAACATCTCCCTCCAGAAGGAGGCATCTGGTGTGACCACATCTGAGGACTaGCTTCCTCCAGGATTCAAA | + |
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Preference number: 4 (lower is better) Translates to: SCVQHHWNISLQKEASGVTTSED*LPPGFK Trigger: TTTGAATCCTGGAGGAAGCCAGTCCTCAGATGTGGT...CACACCAGATGCCTCCTTCTGGAGGGAGATGTTCCAGTGATGCTGAACACAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR TCA 90 bp | TTTATTTTATCACGGTTTCTGGTCCTTCCTAACTGGCAGTCACTATTCTGTGGACAAAGAAGGCTGCATTaGCGAGCCTTCCACCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: FILSRFLVLPNWQSLFCGQRRLH*RAFHPS Trigger: GCTCGGGTGGAAGGCTCGTCAATGCAGCCTTCTTTG...TCCACAGAATAGTGACTGCCAGTTAGGAAGGACCAGAAACCGTGATAAAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132121.8 |
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| CDS-3UTR TCA 90 bp | ATGGTTGTTTTATTTTATCACGGTTTCTGGTCCTTCCTAACTGGCAGTCACTATCCTTCAACCCACATGTaGCCGCGGGGGACTTTGACC | + |
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Preference number: 4 (lower is better) Translates to: MVVLFYHGFWSFLTGSHYPSTHM*PRGTLT Trigger: GGTCAAAGTCCCCCGCGGTCACATGTGGGTTGAAGG...ATAGTGACTGCCAGTTAGGAAGGACCAGAAACCGTGATAAAATAAAACAACCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132121.8 |
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| CDS-3UTR CCA 90 bp | CAAATGGTTGTTTTATTTTATCACGGTTTCTGGTCCTTCCTAACTGGCAGTCACGAGTGGACAGCGCTCTaGAGGAAGAACAGATTCCAG | + |
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Preference number: 4 (lower is better) Translates to: QMVVLFYHGFWSFLTGSHEWTAL*RKNRFQ Trigger: CTGGAATCTGTTCTTCCTCCAGAGCGCTGTCCACTC...GTGACTGCCAGTTAGGAAGGACCAGAAACCGTGATAAAATAAAACAACCATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132121.8 |
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| CDS-3UTR GCA 90 bp | ATATGGAAATTCCAGACAACCTTAAAGATATACAGAGGTCTTGTGTTCAGCATCTGTGTGGCATGGGCATaGAGGAGTCCCAGAGAAACC | + |
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Preference number: 4 (lower is better) Translates to: IWKFQTTLKIYRGLVFSICVAWA*RSPRET Trigger: GGTTTCTCTGGGACTCCTGCATGCCCATGCCACACA...GATGCTGAACACAAGACCTCTGTATATCTTTAAGGTTGTCTGGAATTTCCATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR CCA 90 bp | AGAGGTCTTGTGTTCAGCATCACTGGAACATCTCCCTCCAGAAGGAGGCATCTGAATGATTTTCTGTTCTaGGTTTTTAGGAGACACCAA | + |
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Preference number: 4 (lower is better) Translates to: RGLVFSITGTSPSRRRHLNDFLF*VFRRHQ Trigger: TTGGTGTCTCCTAAAAACCCAGAACAGAAAATCATT...CAGATGCCTCCTTCTGGAGGGAGATGTTCCAGTGATGCTGAACACAAGACCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR CCA 90 bp | TTTATTTTATCACGGTTTCTGGTCCTTCCTAACTGGCAGTCACTATTCTGTGGAAAAATATGTGTGGCATaGGCATGCAGGAGTCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: FILSRFLVLPNWQSLFCGKICVA*ACRSPR Trigger: TCTGGGACTCCTGCATGCCCATGCCACACATATTTT...TCCACAGAATAGTGACTGCCAGTTAGGAAGGACCAGAAACCGTGATAAAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132121.8 |
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| CDS-3UTR CCA 90 bp | CTGGTCCTTCCTAACTGGCAGTCACTATTCTGTGGATATCTTCAATTACAATATACCACATCTGAGGACTaGCTTCCTCCAGGATTCAAA | + |
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Preference number: 4 (lower is better) Translates to: LVLPNWQSLFCGYLQLQYTTSED*LPPGFK Trigger: TTTGAATCCTGGAGGAAGCCAGTCCTCAGATGTGGT...ATATTGTAATTGAAGATATCCACAGAATAGTGACTGCCAGTTAGGAAGGACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132121.8 |
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| CDS-3UTR CCA 90 bp | ATATGGAAATTCCAGACAACCTTAAAGATATACAGAGGTCTTGTGTTCAGCATCGCCACAAAATATGTGTaGCATGGGCATGCAGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: IWKFQTTLKIYRGLVFSIATKYV*HGHAGV Trigger: GACTCCTGCATGCCCATGCCACACATATTTTGTGGC...GATGCTGAACACAAGACCTCTGTATATCTTTAAGGTTGTCTGGAATTTCCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR CCA 90 bp | ATATGGAAATTCCAGACAACCTTAAAGATATACAGAGGTCTTGTGTTCAGCATCTATTTCTCACCAGTCTaGAGTGGACAGCGCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: IWKFQTTLKIYRGLVFSIYFSPV*SGQRSG Trigger: TCCAGAGCGCTGTCCACTCCAGACTGGTGAGAAATA...GATGCTGAACACAAGACCTCTGTATATCTTTAAGGTTGTCTGGAATTTCCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR GCA 90 bp | AATATGGAAATTCCAGACAACCTTAAAGATATACAGAGGTCTTGTGTTCAGCATGGATTCAAAGAAGGCTaGATTGACGAGCCTTCCACC | + |
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Preference number: 4 (lower is better) Translates to: NMEIPDNLKDIQRSCVQHGFKEG*IDEPST Trigger: GGTGGAAGGCTCGTCAATGCAGCCTTCTTTGAATCC...ATGCTGAACACAAGACCTCTGTATATCTTTAAGGTTGTCTGGAATTTCCATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR CCA 90 bp | AATATGGAAATTCCAGACAACCTTAAAGATATACAGAGGTCTTGTGTTCAGCATGCCACAAAATATGTGTaGCATGGGCATGCAGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: NMEIPDNLKDIQRSCVQHATKYV*HGHAGV Trigger: GACTCCTGCATGCCCATGCCACACATATTTTGTGGC...ATGCTGAACACAAGACCTCTGTATATCTTTAAGGTTGTCTGGAATTTCCATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR CCA 90 bp | TTTATTTTATCACGGTTTCTGGTCCTTCCTAACTGGCAGTCACTATTCTGTGGAAATGATTTTCTGTTCTaGGTTTTTAGGAGACACCAA | + |
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Preference number: 4 (lower is better) Translates to: FILSRFLVLPNWQSLFCGNDFLF*VFRRHQ Trigger: TTGGTGTCTCCTAAAAACCCAGAACAGAAAATCATT...TCCACAGAATAGTGACTGCCAGTTAGGAAGGACCAGAAACCGTGATAAAATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132121.8 |
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| CDS TCA 90 bp | ACGAGCCTTCCACCCGAGCCACGCAGGCCACGCGATCCAAGAAAGTaGCTGCCACGGGCACCGCCACGAAGAAGCCTTTGCAAAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: TSLPPEPRRPRDPRK*LPRAPPRRSLCKRP Trigger: AGGCCTTTTGCAAAGGCTTCTTCGTGGCGGTGCCCGTGGCAGTCACTTTCTTGGATCGCGTGGCCTGCGTGGCTCGGGTGGAAGGCTCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080160.4 ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS GCA 90 bp | AGTACCACATCTGAGGACTGGCTTCCTCCAGGATTCAAAGAAGGCTaGATTGACGAGCCTTCCACCCGAGCCACGCAGGCCACGCGATCC | + |
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Preference number: 5 (lower is better) Translates to: STTSEDWLPPGFKEG*IDEPSTRATQATRS Trigger: GGATCGCGTGGCCTGCGTGGCTCGGGTGGAAGGCTCGTCAATGCAGCCTTCTTTGAATCCTGGAGGAAGCCAGTCCTCAGATGTGGTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080160.4 ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS CCA 90 bp | CAGATTCCAGTCTCTGCCAGCGCTCTGGAGGCCACAAAATATGTGTaGCATGGGCATGCAGGAGTCCCAGAGAAACCGGTCCAAAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: QIPVSASALEATKYV*HGHAGVPEKPVQKN Trigger: ATTCTTTTGGACCGGTTTCTCTGGGACTCCTGCATGCCCATGCCACACATATTTTGTGGCCTCCAGAGCGCTGGCAGAGACTGGAATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR CAA 90 bp | GCATCACTGGAACATCTCCCTCCAGAAGGAGGCATCTGGTGTGTTCAGCTCCTCGCCACGAAGAAGCCTTaGCAAAAGGCCTTGAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: ASLEHLPPEGGIWCVQLLATKKP*QKALKH Trigger: ATGCTTCAAGGCCTTTTGCAAAGGCTTCTTCGTGGC...GAGGAGCTGAACACACCAGATGCCTCCTTCTGGAGGGAGATGTTCCAGTGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS CCA 90 bp | TCCAGTCTCTGCCAGCGCTCTGGAGGCCACAAAATATGTGTGGCATaGGCATGCAGGAGTCCCAGAGAAACCGGTCCAAAAGAATTACTA | + |
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Preference number: 5 (lower is better) Translates to: SSLCQRSGGHKICVA*ACRSPRETGPKELL Trigger: TAGTAATTCTTTTGGACCGGTTTCTCTGGGACTCCTGCATGCCCATGCCACACATATTTTGTGGCCTCCAGAGCGCTGGCAGAGACTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS TCA 90 bp | GTCCATGATGATCGCCTTCAACCCACATGTGACCGCGGGGGACTTTaGCCAACCGGTTTTTGTGTCCAATTGTTCTTACAATATCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: VHDDRLQPTCDRGGL*PTGFCVQLFLQYLL Trigger: AAGGAGATATTGTAAGAACAATTGGACACAAAAACCGGTTGGTCAAAGTCCCCCGCGGTCACATGTGGGTTGAAGGCGATCATCATGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS CCA 90 bp | AAATTTCTCACTTTCCAGTGGTTCAAAAGTACCACATCTGAGGACTaGCTTCCTCCAGGATTCAAAGAAGGCTGCATTGACGAGCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: KFLTFQWFKSTTSED*LPPGFKEGCIDEPS Trigger: GGAAGGCTCGTCAATGCAGCCTTCTTTGAATCCTGGAGGAAGCCAGTCCTCAGATGTGGTACTTTTGAACCACTGGAAAGTGAGAAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080160.4 ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS-3UTR CAA 90 bp | ATATGGAAATTCCAGACAACCTTAAAGATATACAGAGGTCTTGTGTTCAGCATCGCCACGAAGAAGCCTTaGCAAAAGGCCTTGAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: IWKFQTTLKIYRGLVFSIATKKP*QKALKH Trigger: ATGCTTCAAGGCCTTTTGCAAAGGCTTCTTCGTGGC...GATGCTGAACACAAGACCTCTGTATATCTTTAAGGTTGTCTGGAATTTCCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS TCA 72 bp | CCACCCGAGCCACGCAGGCCACGCGATCCAAGAAAGTaGCTGCCACGGGCACCGCCACGAAGAAGCCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: PPEPRRPRDPRK*LPRAPPRRSLC Trigger: GCAAAGGCTTCTTCGTGGCGGTGCCCGTGGCAGTCACTTTCTTGGATCGCGTGGCCTGCGTGGCTCGGGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080160.4 ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS CAA 90 bp | CCACATCTGAGGACTGGCTTCCTCCAGGATTCAAAGAAGGCTGCATaGACGAGCCTTCCACCCGAGCCACGCAGGCCACGCGATCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: PHLRTGFLQDSKKAA*TSLPPEPRRPRDPR Trigger: TCTTGGATCGCGTGGCCTGCGTGGCTCGGGTGGAAGGCTCGTCAATGCAGCCTTCTTTGAATCCTGGAGGAAGCCAGTCCTCAGATGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080160.4 ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS CCA 72 bp | GTCTCTGCCAGCGCTCTGGAGGCCACAAAATATGTGTaGCATGGGCATGCAGGAGTCCCAGAGAAACCGGTC | + |
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Preference number: 6 (lower is better) Translates to: VSASALEATKYV*HGHAGVPEKPV Trigger: GACCGGTTTCTCTGGGACTCCTGCATGCCCATGCCACACATATTTTGTGGCCTCCAGAGCGCTGGCAGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS TCA 72 bp | CGGGCACCGCCACGAAGAAGCCTTTGCAAAAGGCCTTaGAGCATCTTCTCGCCCAGCTTTGTGACTGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: RAPPRRSLCKRP*SIFSPSFVTVP Trigger: TGGCACAGTCACAAAGCTGGGCGAGAAGATGCTTCAAGGCCTTTTGCAAAGGCTTCTTCGTGGCGGTGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080160.4 ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS CCA 72 bp | TGCCAGCGCTCTGGAGGCCACAAAATATGTGTGGCATaGGCATGCAGGAGTCCCAGAGAAACCGGTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: CQRSGGHKICVA*ACRSPRETGPK Trigger: TTTTGGACCGGTTTCTCTGGGACTCCTGCATGCCCATGCCACACATATTTTGTGGCCTCCAGAGCGCTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS CAA 72 bp | AAAGTGACTGCCACGGGCACCGCCACGAAGAAGCCTTaGCAAAAGGCCTTGAAGCATCTTCTCGCCCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: KVTATGTATKKP*QKALKHLLAQL Trigger: AAGCTGGGCGAGAAGATGCTTCAAGGCCTTTTGCAAAGGCTTCTTCGTGGCGGTGCCCGTGGCAGTCACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080160.4 ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS CAA 90 bp | CGATCCAAGAAAGTGACTGCCACGGGCACCGCCACGAAGAAGCCTTaGCAAAAGGCCTTGAAGCATCTTCTCGCCCAGCTTTGTGACTGT | + |
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Preference number: 6 (lower is better) Translates to: RSKKVTATGTATKKP*QKALKHLLAQLCDC Trigger: ACAGTCACAAAGCTGGGCGAGAAGATGCTTCAAGGCCTTTTGCAAAGGCTTCTTCGTGGCGGTGCCCGTGGCAGTCACTTTCTTGGATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080160.4 ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS GCA 72 bp | CGCTCTGGAGGCCACAAAATATGTGTGGCATGGGCATaGAGGAGTCCCAGAGAAACCGGTCCAAAAGAATTA | + |
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Preference number: 6 (lower is better) Translates to: RSGGHKICVAWA*RSPRETGPKEL Trigger: TAATTCTTTTGGACCGGTTTCTCTGGGACTCCTGCATGCCCATGCCACACATATTTTGTGGCCTCCAGAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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| CDS TCA 72 bp | GATCGCCTTCAACCCACATGTGACCGCGGGGGACTTTaGCCAACCGGTTTTTGTGTCCAATTGTTCTTACAA | + |
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Preference number: 6 (lower is better) Translates to: DRLQPTCDRGGL*PTGFCVQLFLQ Trigger: TTGTAAGAACAATTGGACACAAAAACCGGTTGGTCAAAGTCCCCCGCGGTCACATGTGGGTTGAAGGCGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000132121.8 ENSMUST00000134965.8 |
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