Pregenerated sensors for ILRUN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056692Ensembl transcript IDs: ENSMUST00000075076.6, ENSMUST00000114859.9, ENSMUST00000114863.10, ENSMUST00000233131.2, ENSMUST00000233508.2, ENSMUST00000233533.2
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAGAAGCAGGCAGAGCAGACCCGTTCCACACACCCACGCACCTGTaGACCCACGCACCCGGGCTGGAGGACCTCCTACAGCCACTCTCA | + |
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Preference number: 1 (lower is better) Translates to: TEAGRADPFHTPTHL*THAPGLEDLLQPLS Trigger: TGAGAGTGGCTGTAGGAGGTCCTCCAGCCCGGGTGCGTGGGTGCACAGGTGCGTGGGTGTGTGGAACGGGTCTGCTCTGCCTGCTTCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR GCA 90 bp | GAGACAAGCAGCTCCGAGGCCAGAAGCAGGAAGAATGGCTGGGCATaGATGTGCTCTAGGGTGGCAGCGTCCTCAGAGACTGGCCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: ETSSSEARSRKNGWA*MCSRVAASSETGPK Trigger: CTTGGGGCCAGTCTCTGAGGACGCTGCCACCCTAGAGCACATGCATGCCCAGCCATTCTTCCTGCTTCTGGCCTCGGAGCTGCTTGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR GCA 90 bp | GAAGCAAGGGACAGCTCACACCTGCTGACGCCATACAACCCGGTGTaGACGCAGCACATGCACACACCAACAAGAGCCGAGGGAAGACGG | + |
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Preference number: 1 (lower is better) Translates to: EARDSSHLLTPYNPV*TQHMHTPTRAEGRR Trigger: CCGTCTTCCCTCGGCTCTTGTTGGTGTGTGCATGTGCTGCGTGCACACCGGGTTGTATGGCGTCAGCAGGTGTGAGCTGTCCCTTGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR GCA 90 bp | CCACATTTCAACCCGAGTGGATTCCATGGGACACCAGTGGGCACCTaGCCAGGGAGCAAAGGCCTGTCCTCCAGCTGGGCTACAACTTGC | + |
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Preference number: 1 (lower is better) Translates to: PHFNPSGFHGTPVGT*PGSKGLSSSWATTC Trigger: GCAAGTTGTAGCCCAGCTGGAGGACAGGCCTTTGCTCCCTGGGCAGGTGCCCACTGGTGTCCCATGGAATCCACTCGGGTTGAAATGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR CCA 90 bp | CATCTGGAGACAAGCAGCTCCGAGGCCAGAAGCAGGAAGAATGGCTaGGCATGCATGTGCTCTAGGGTGGCAGCGTCCTCAGAGACTGGC | + |
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Preference number: 1 (lower is better) Translates to: HLETSSSEARSRKNG*ACMCSRVAASSETG Trigger: GCCAGTCTCTGAGGACGCTGCCACCCTAGAGCACATGCATGCCCAGCCATTCTTCCTGCTTCTGGCCTCGGAGCTGCTTGTCTCCAGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR TCA 90 bp | ATGAAGCAGCAGCCACAGGGCACTCACACGGGGAAGAAAGACGGCTaGCTCATGGTGACTACGGGCAGGAGTGCTGAGCAGTTAAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: MKQQPQGTHTGKKDG*LMVTTGRSAEQLRS Trigger: GCTCCTTAACTGCTCAGCACTCCTGCCCGTAGTCACCATGAGTCAGCCGTCTTTCTTCCCCGTGTGAGTGCCCTGTGGCTGCTGCTTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
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| 3UTR TCA 90 bp | CTGGGTGACAGTGTGGTACCTGGTGGGGTCAGATGGGGAAGCCAGTaGGGCAAGGCTGAAGCTTCTCATGGTTTCAGGAGGGCATCTGGA | + |
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Preference number: 1 (lower is better) Translates to: LGDSVVPGGVRWGSQ*GKAEASHGFRRASG Trigger: TCCAGATGCCCTCCTGAAACCATGAGAAGCTTCAGCCTTGCCTCACTGGCTTCCCCATCTGACCCCACCAGGTACCACACTGTCACCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR GCA 90 bp | GCCTGCCTACTCTCTTGTCCTTTCCTGCTGGAAGCTCATGCCTACTaGCCACCTTGGCCACCAGCCATCTTGGTGAAAGCGCCTGGCTTA | + |
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Preference number: 1 (lower is better) Translates to: ACLLSCPFLLEAHAY*PPWPPAILVKAPGL Trigger: TAAGCCAGGCGCTTTCACCAAGATGGCTGGTGGCCAAGGTGGGCAGTAGGCATGAGCTTCCAGCAGGAAAGGACAAGAGAGTAGGCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR GCA 90 bp | CCTGTAAGCCTGCCTACTCTCTTGTCCTTTCCTGCTGGAAGCTCATaGCTACTGCCCACCTTGGCCACCAGCCATCTTGGTGAAAGCGCC | + |
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Preference number: 1 (lower is better) Translates to: PVSLPTLLSFPAGSS*LLPTLATSHLGESA Trigger: GGCGCTTTCACCAAGATGGCTGGTGGCCAAGGTGGGCAGTAGGCATGAGCTTCCAGCAGGAAAGGACAAGAGAGTAGGCAGGCTTACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR TCA 90 bp | TGTGGTACCTGGTGGGGTCAGATGGGGAAGCCAGTGAGGCAAGGCTaGAGCTTCTCATGGTTTCAGGAGGGCATCTGGAGACAAGCAGCT | + |
|
Preference number: 1 (lower is better) Translates to: CGTWWGQMGKPVRQG*SFSWFQEGIWRQAA Trigger: AGCTGCTTGTCTCCAGATGCCCTCCTGAAACCATGAGAAGCTTCAGCCTTGCCTCACTGGCTTCCCCATCTGACCCCACCAGGTACCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR TCA 90 bp | TGGAAGCTCATGCCTACTGCCCACCTTGGCCACCAGCCATCTTGGTaGAAGCGCCTGGCTTATGGTTATAGCCAGTCCATACAGGGGGAG | + |
|
Preference number: 1 (lower is better) Translates to: WKLMPTAHLGHQPSW*KRLAYGYSQSIQGE Trigger: CTCCCCCTGTATGGACTGGCTATAACCATAAGCCAGGCGCTTTCACCAAGATGGCTGGTGGCCAAGGTGGGCAGTAGGCATGAGCTTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR TCA 90 bp | CCCTGCTGGAGGGACTGGCCATCTAGGGCTGGAGACCGACCAACGTaGTGGGATCCAAGGCTCTCACTAACAGGAAATGGACAAATCAGC | + |
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Preference number: 1 (lower is better) Translates to: PCWRDWPSRAGDRPT*WDPRLSLTGNGQIS Trigger: GCTGATTTGTCCATTTCCTGTTAGTGAGAGCCTTGGATCCCATCACGTTGGTCGGTCTCCAGCCCTAGATGGCCAGTCCCTCCAGCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
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| 3UTR GCA 90 bp | CCCAAGGAAACAAGGGGAAGAGGGCAGGCGGAGAAGCACTCAGTCTaGACCTGTAAGCCTGCCTACTCTCTTGTCCTTTCCTGCTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: PKETRGRGQAEKHSV*TCKPAYSLVLSCWK Trigger: CTTCCAGCAGGAAAGGACAAGAGAGTAGGCAGGCTTACAGGTGCAGACTGAGTGCTTCTCCGCCTGCCCTCTTCCCCTTGTTTCCTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR CCA 90 bp | GCCTGGTTAAAGAGTCCCATGGAGAGATCCACATTTCAACCCGAGTaGATTCCATGGGACACCAGTGGGCACCTGCCCAGGGAGCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: AWLKSPMERSTFQPE*IPWDTSGHLPREQR Trigger: CCTTTGCTCCCTGGGCAGGTGCCCACTGGTGTCCCATGGAATCCACTCGGGTTGAAATGTGGATCTCTCCATGGGACTCTTTAACCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR CCA 90 bp | TCAGTCTGCACCTGTAAGCCTGCCTACTCTCTTGTCCTTTCCTGCTaGAAGCTCATGCCTACTGCCCACCTTGGCCACCAGCCATCTTGG | + |
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Preference number: 1 (lower is better) Translates to: SVCTCKPAYSLVLSC*KLMPTAHLGHQPSW Trigger: CCAAGATGGCTGGTGGCCAAGGTGGGCAGTAGGCATGAGCTTCCAGCAGGAAAGGACAAGAGAGTAGGCAGGCTTACAGGTGCAGACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR GCA 90 bp | ATGGTGACTACGGGCAGGAGTGCTGAGCAGTTAAGGAGCCACAGCTaGTCTGGGCAGTGGTGGTCTAGCATTGTAGGTTTGCCACGAAGA | + |
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Preference number: 1 (lower is better) Translates to: MVTTGRSAEQLRSHS*SGQWWSSIVGLPRR Trigger: TCTTCGTGGCAAACCTACAATGCTAGACCACCACTGCCCAGAGCAGCTGTGGCTCCTTAACTGCTCAGCACTCCTGCCCGTAGTCACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
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| 3UTR GCA 90 bp | GTTCCAGCTGTTACACACGTGACAGAGGACACCTCTGCAACGGAATaGCCCCAGGTTTCTGTGGCCACACAGGAAAGTCCTTACCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: VPAVTHVTEDTSATE*PQVSVATQESPYLR Trigger: TCTGAGGTAAGGACTTTCCTGTGTGGCCACAGAAACCTGGGGGCATTCCGTTGCAGAGGTGTCCTCTGTCACGTGTGTAACAGCTGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR GCA 90 bp | ACACACCCACATGCACATGTGCACACACACACCCACATGCACATGTaGACACATACCCACACACCCAGATTCTTCTCAAGCCTGCACCCG | + |
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Preference number: 1 (lower is better) Translates to: THPHAHVHTHTHMHM*THTHTPRFFSSLHP Trigger: CGGGTGCAGGCTTGAGAAGAATCTGGGTGTGTGGGTATGTGTGCACATGTGCATGTGGGTGTGTGTGTGCACATGTGCATGTGGGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR TCA 90 bp | TATTTCTGTGCTGCCAGAGGTGAGTGTGGGCACCTATTTCAGGCCTaGGGACCTATCAGGGTAGACGGGAGTCATAGCCTTCCGATTCTG | + |
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Preference number: 1 (lower is better) Translates to: YFCAARGECGHLFQA*GPIRVDGSHSLPIL Trigger: CAGAATCGGAAGGCTATGACTCCCGTCTACCCTGATAGGTCCTCAGGCCTGAAATAGGTGCCCACACTCACCTCTGGCAGCACAGAAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
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| 3UTR GCA 90 bp | AATCTCTGTGGCAGTTCCCCAGATGGTCTAAACTACTCCTGTCTGTaGACTGTCCCAGCCTATCCATCCTGTCAGCCACTCGCTTCTGTC | + |
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Preference number: 1 (lower is better) Translates to: NLCGSSPDGLNYSCL*TVPAYPSCQPLASV Trigger: GACAGAAGCGAGTGGCTGACAGGATGGATAGGCTGGGACAGTGCACAGACAGGAGTAGTTTAGACCATCTGGGGAACTGCCACAGAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
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| 3UTR TCA 90 bp | AACACCCGAGTCAGAACAGAGACAGAAATGAATTACACATGGGGATaGAGCAGCAGCCACAGGGCACTCACACGGGGAAGAAAGACGGCT | + |
|
Preference number: 1 (lower is better) Translates to: NTRVRTETEMNYTWG*SSSHRALTRGRKTA Trigger: AGCCGTCTTTCTTCCCCGTGTGAGTGCCCTGTGGCTGCTGCTTCATCCCCATGTGTAATTCATTTCTGTCTCTGTTCTGACTCGGGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
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| 3UTR CCA 90 bp | CAACTCATTAGACTGACGTCATCACCAAAACCCAAGATGGCTGCGTaGATCTTCTCGGTCGCCTCAACACCACTCCTGCAGTTCAGCATT | + |
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Preference number: 1 (lower is better) Translates to: QLIRLTSSPKPKMAA*IFSVASTPLLQFSI Trigger: AATGCTGAACTGCAGGAGTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCATCTTGGGTTTTGGTGATGACGTCAGTCTAATGAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
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| 3UTR GCA 90 bp | ATACTTACACACACCCACATGCACATGTGCACACACACACCCACATaGACATGTGCACACATACCCACACACCCAGATTCTTCTCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: ILTHTHMHMCTHTPT*TCAHIPTHPDSSQA Trigger: GGCTTGAGAAGAATCTGGGTGTGTGGGTATGTGTGCACATGTGCATGTGGGTGTGTGTGTGCACATGTGCATGTGGGTGTGTGTAAGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR CCA 90 bp | GGACTTTGCATATTCTTGTATCTTTGGCAGACAGCTGTTCTAGCCTaGTTAAAGAGTCCCATGGAGAGATCCACATTTCAACCCGAGTGG | + |
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Preference number: 1 (lower is better) Translates to: GLCIFLYLWQTAVLA*LKSPMERSTFQPEW Trigger: CCACTCGGGTTGAAATGTGGATCTCTCCATGGGACTCTTTAACCAGGCTAGAACAGCTGTCTGCCAAAGATACAAGAATATGCAAAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR CCA 90 bp | AGACCGACCAACGTGATGGGATCCAAGGCTCTCACTAACAGGAAATaGACAAATCAGCAAAATCAAACTAGTCAAACTCATCCCCCACCT | + |
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Preference number: 1 (lower is better) Translates to: RPTNVMGSKALTNRK*TNQQNQTSQTHPPP Trigger: AGGTGGGGGATGAGTTTGACTAGTTTGATTTTGCTGATTTGTCCATTTCCTGTTAGTGAGAGCCTTGGATCCCATCACGTTGGTCGGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCTCCAGCTGGGCTACAACTTGCCACCCACACTGAGCAGCCTGCCCCGCTGGCGGCCTCTCAGGGAGTaGTCACTAGTGGGGCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: VLQLGYNLPPTLSSLPRWRPLRE*SLVGLP Trigger: TGGGAGCCCCACTAGTGACCACTCCCTGAGAGGCCG...CCAGCGGGGCAGGCTGCTCAGTGTGGGTGGCAAGTTGTAGCCCAGCTGGAGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR-3UTR TCA 90 bp | AGCCCCCTGAGACTTGCGGCTTGGGCACCTGGTAGGGACTGCCCTTGGCTCAAGACAGCCACTCTCACCTaGCCTTCCTGCTCTGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: SPLRLAAWAPGRDCPWLKTATLT*PSCSAH Trigger: GTGAGCAGAGCAGGAAGGTCAGGTGAGAGTGGCTGT...CTTGAGCCAAGGGCAGTCCCTACCAGGTGCCCAAGCCGCAAGTCTCAGGGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR-3UTR GCA 90 bp | GTCCTCCAGCTGGGCTACAACTTGCCACCCACACTGAGCAGCCTGCCCCGCTGGCCGTGCGATGTGGTCTaGAATCCAGAGGAACCCCTT | + |
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Preference number: 2 (lower is better) Translates to: VLQLGYNLPPTLSSLPRWPCDVV*NPEEPL Trigger: AAGGGGTTCCTCTGGATTGCAGACCACATCGCACGG...CCAGCGGGGCAGGCTGCTCAGTGTGGGTGGCAAGTTGTAGCCCAGCTGGAGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR-3UTR GCA 90 bp | GCATGTGCTCTAGGGTGGCAGCGTCCTCAGAGACTGGCCCCAAGAAGGTCCTCAACACCAGTGGGCACCTaGCCAGGGAGCAAAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: ACALGWQRPQRLAPRRSSTPVGT*PGSKGL Trigger: CAGGCCTTTGCTCCCTGGGCAGGTGCCCACTGGTGT...TGAGGACCTTCTTGGGGCCAGTCTCTGAGGACGCTGCCACCCTAGAGCACATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR-3UTR GCA 90 bp | GCATGTGCTCTAGGGTGGCAGCGTCCTCAGAGACTGGCCCCAAGAAGGTCCTCAGCACCTGGTAGGGACTaGCCTTGGCTCAAGGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: ACALGWQRPQRLAPRRSSAPGRD*PWLKGP Trigger: GGGACCCTTGAGCCAAGGGCAGTCCCTACCAGGTGC...TGAGGACCTTCTTGGGGCCAGTCTCTGAGGACGCTGCCACCCTAGAGCACATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR-3UTR CCA 90 bp | GCATGTGCTCTAGGGTGGCAGCGTCCTCAGAGACTGGCCCCAAGAAGGTCCTCAAGCAGCCTGCCCCGCTaGAGGAGGCCTTTTCATTCC | + |
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Preference number: 2 (lower is better) Translates to: ACALGWQRPQRLAPRRSSSSLPR*RRPFHS Trigger: GGAATGAAAAGGCCTCCTCCAGCGGGGCAGGCTGCT...TGAGGACCTTCTTGGGGCCAGTCTCTGAGGACGCTGCCACCCTAGAGCACATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR-3UTR CCA 90 bp | GCATGTGCTCTAGGGTGGCAGCGTCCTCAGAGACTGGCCCCAAGAAGGTCCTCACTGAGACTTGCGGCTTaGGCACCTGGTAGGGACTGC | + |
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Preference number: 2 (lower is better) Translates to: ACALGWQRPQRLAPRRSSLRLAA*APGRDC Trigger: GCAGTCCCTACCAGGTGCCCAAGCCGCAAGTCTCAG...TGAGGACCTTCTTGGGGCCAGTCTCTGAGGACGCTGCCACCCTAGAGCACATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR-3UTR CCA 90 bp | CAACCCGGTGTGCACGCAGCACATGCACACACCAACAAGAGCCGAGGGAAGACGGGGGTCCGTGCGATGTaGTCTGCAATCCAGAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: QPGVHAAHAHTNKSRGKTGVRAM*SAIQRN Trigger: GTTCCTCTGGATTGCAGACCACATCGCACGGACCCC...CGTCTTCCCTCGGCTCTTGTTGGTGTGTGCATGTGCTGCGTGCACACCGGGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR-3UTR TCA 90 bp | CTTGCCACCCACACTGAGCAGCCTGCCCCGCTGGAGGAGGCCTTTTCATTCCCAAGGAGAGGGGGAAGGTaGTATCTCATTGGCAGATGC | + |
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Preference number: 2 (lower is better) Translates to: LATHTEQPAPLEEAFSFPRRGGR*YLIGRC Trigger: GCATCTGCCAATGAGATATCACCTTCCCCCTCTCCT...TGGGAATGAAAAGGCCTCCTCCAGCGGGGCAGGCTGCTCAGTGTGGGTGGCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR-3UTR GCA 90 bp | CAGACAGAGACAGAAGCAGGCAGAGCAGACCCGTTCCACACACCCACGCACCTGCAGAGTCCCCAAACGTaGCACGCCAGCCTTACTATG | + |
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Preference number: 2 (lower is better) Translates to: QTETEAGRADPFHTPTHLQSPQT*HASLTM Trigger: CATAGTAAGGCTGGCGTGGCACGTTTGGGGACTCTG...CAGGTGCGTGGGTGTGTGGAACGGGTCTGCTCTGCCTGCTTCTGTCTCTGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR-3UTR GCA 90 bp | ACGGTAAGGAAAACCTCATCTTCATCTCCTAGGCACCACGAGGCCCCACCAGACACACCAGTGGGCACCTaGCCAGGGAGCAAAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: TVRKTSSSSPRHHEAPPDTPVGT*PGSKGL Trigger: CAGGCCTTTGCTCCCTGGGCAGGTGCCCACTGGTGT...GTCTGGTGGGGCCTCGTGGTGCCTAGGAGATGAAGATGAGGTTTTCCTTACCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR CAA 90 bp | AGGCGGAGAAGCACTCAGTCTGCACCTGTAAGCCTGCCTACTCTCTaGTCCTTTCCTGCTGGAAGCTCATGCCTACTGCCCACCTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RRRSTQSAPVSLPTL*SFPAGSSCLLPTLA Trigger: GGCCAAGGTGGGCAGTAGGCATGAGCTTCCAGCAGGAAAGGACAAGAGAGTAGGCAGGCTTACAGGTGCAGACTGAGTGCTTCTCCGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR-3UTR GCA 90 bp | TTTACTCAGGATAAACCCGCCCAGAGCGAGAAGGCACAGCAGGAGCCCGCTGCATTAAGGAGCCACAGCTaGTCTGGGCAGTGGTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: FTQDKPAQSEKAQQEPAALRSHS*SGQWWS Trigger: AGACCACCACTGCCCAGAGCAGCTGTGGCTCCTTAA...TGCAGCGGGCTCCTGCTGTGCCTTCTCGCTCTGGGCGGGTTTATCCTGAGTAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
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| 3UTR-3UTR CCA 90 bp | ACTTTACTCAGGATAAACCCGCCCAGAGCGAGAAGGCACAGCAGGAGCCCGCTGAGCTGCTCTGGGCAGTaGTGGTCTAGCATTGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: TLLRINPPRARRHSRSPLSCSGQ*WSSIVG Trigger: ACCTACAATGCTAGACCACCACTGCCCAGAGCAGCT...CAGCGGGCTCCTGCTGTGCCTTCTCGCTCTGGGCGGGTTTATCCTGAGTAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACTCCTGCAGTTCAGCATTCCTCTTCTTCTGTGATTaGGGGGTAGGTGGGGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: WLRGSSRSPQHHSCSSAFLFFCD*GVGGGL Trigger: CAGACCCCCACCTACCCCCCAATCACAGAAGAAGAG...GAATGCTGAACTGCAGGAGTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCCCGGCTCTCAAGCCACCGACTTAGAGGGAAGGAGGGTTAGGAGGAGGGACCTTCCCCTTCCCAAGTaGCCTAACAACTCATTAGAC | + |
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Preference number: 2 (lower is better) Translates to: IPGSQATDLEGRRVRRRDLPLPK*PNNSLD Trigger: GTCTAATGAGTTGTTAGGTCACTTGGGAAGGGGAAG...GTCCCTCCTCCTAACCCTCCTTCCCTCTAAGTCGGTGGCTTGAGAGCCGGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTTACTATGACAGGCTTCCAGAGCAGGTCTGTCCTGTAGCATGCTGTCCCCCGTGCGATGTGGTCTaGAATCCAGAGGAACCCCTT | + |
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Preference number: 2 (lower is better) Translates to: QPYYDRLPEQVCPVACCPPCDVV*NPEEPL Trigger: AAGGGGTTCCTCTGGATTGCAGACCACATCGCACGG...GGGACAGCATGCTACAGGACAGACCTGCTCTGGAAGCCTGTCATAGTAAGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTTACTATGACAGGCTTCCAGAGCAGGTCTGTCCTGTAGCATGCTGTCCCCTCTTCTTCTGTGATTaGGGGGTAGGTGGGGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: QPYYDRLPEQVCPVACCPLFFCD*GVGGGL Trigger: CAGACCCCCACCTACCCCCCAATCACAGAAGAAGAG...GGGACAGCATGCTACAGGACAGACCTGCTCTGGAAGCCTGTCATAGTAAGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 |
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| 3UTR-3UTR CCA 90 bp | CTAACTCTCCAGGATGCACAGGCAAGGCTTGTTTCTGGGAAGGAAGCCAGGGTACTCTTCTTCTGTGATTaGGGGGTAGGTGGGGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LTLQDAQARLVSGKEARVLFFCD*GVGGGL Trigger: CAGACCCCCACCTACCCCCCAATCACAGAAGAAGAG...TACCCTGGCTTCCTTCCCAGAAACAAGCCTTGCCTGTGCATCCTGGAGAGTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| 3UTR-3UTR CCA 90 bp | ACGGTAAGGAAAACCTCATCTTCATCTCCTAGGCACCACGAGGCCCCACCAGACCAGAAGCAGGAAGAATaGCTGGGCATGCATGTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: TVRKTSSSSPRHHEAPPDQKQEE*LGMHVL Trigger: GAGCACATGCATGCCCAGCCATTCTTCCTGCTTCTG...GTCTGGTGGGGCCTCGTGGTGCCTAGGAGATGAAGATGAGGTTTTCCTTACCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR CAA 90 bp | ACTCTCTTGTCCTTTCCTGCTGGAAGCTCATGCCTACTGCCCACCTaGGCCACCAGCCATCTTGGTGAAAGCGCCTGGCTTATGGTTATA | + |
|
Preference number: 2 (lower is better) Translates to: TLLSFPAGSSCLLPT*ATSHLGESAWLMVI Trigger: TATAACCATAAGCCAGGCGCTTTCACCAAGATGGCTGGTGGCCAAGGTGGGCAGTAGGCATGAGCTTCCAGCAGGAAAGGACAAGAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCTGCTGGAAGCTCATGCCTACTGCCCACCTTGGCCACCAGCCATCTTGGTAGTCTCAGAAGAGGATaGGGAGGAACAAACACCACA | + |
|
Preference number: 2 (lower is better) Translates to: FPAGSSCLLPTLATSHLGSLRRG*GGTNTT Trigger: TGTGGTGTTTGTTCCTCCTCATCCTCTTCTGAGACT...ACCAAGATGGCTGGTGGCCAAGGTGGGCAGTAGGCATGAGCTTCCAGCAGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR-3UTR CCA 90 bp | TTAAAGAGTCCCATGGAGAGATCCACATTTCAACCCGAGTGGATTCCATGGGACCCCAGCAACTCCGACTaGCAGAGTCCCCAAACGTGC | + |
|
Preference number: 2 (lower is better) Translates to: LKSPMERSTFQPEWIPWDPSNSD*QSPQTC Trigger: GCACGTTTGGGGACTCTGCCAGTCGGAGTTGCTGGG...GTCCCATGGAATCCACTCGGGTTGAAATGTGGATCTCTCCATGGGACTCTTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR CAA 90 bp | AGGCTTGTTTCTGGGAAGGAAGCCAGGGTACCTGAGCCGTTACATTaGCCAAGTGAGGCTGCTACAAGCAGAAAGGGGAACAAGAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: RLVSGKEARVPEPLH*PSEAATSRKGNKRR Trigger: TCTCCTCTTGTTCCCCTTTCTGCTTGTAGCAGCCTCACTTGGCAAATGTAACGGCTCAGGTACCCTGGCTTCCTTCCCAGAAACAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR-3UTR CCA 90 bp | AGCCACTCTCACCTGACCTTCCTGCTCTGCTCACAACCCTGGAGCACACGGAGGATATTCTTGTATCTTTaGCAGACAGCTGTTCTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: SHSHLTFLLCSQPWSTRRIFLYL*QTAVLA Trigger: GGCTAGAACAGCTGTCTGCCAAAGATACAAGAATAT...CCTCCGTGTGCTCCAGGGTTGTGAGCAGAGCAGGAAGGTCAGGTGAGAGTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR-3UTR TCA 90 bp | TTTACTCAGGATAAACCCGCCCAGAGCGAGAAGGCACAGCAGGAGCCCGCTGCAGAACAGAGACAGAAATaGATTACACATGGGGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: FTQDKPAQSEKAQQEPAAEQRQK*ITHGDE Trigger: TTCATCCCCATGTGTAATTCATTTCTGTCTCTGTTC...TGCAGCGGGCTCCTGCTGTGCCTTCTCGCTCTGGGCGGGTTTATCCTGAGTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
||
| 3UTR-3UTR TCA 90 bp | GGAGAGGGGGAAGGTGATATCTCATTGGCAGATGCCACTAAGAACAGGGCCAGACTTCCCCTTCCCAAGTaGCCTAACAACTCATTAGAC | + |
|
Preference number: 2 (lower is better) Translates to: GEGEGDISLADATKNRARLPLPK*PNNSLD Trigger: GTCTAATGAGTTGTTAGGTCACTTGGGAAGGGGAAG...TCTGGCCCTGTTCTTAGTGGCATCTGCCAATGAGATATCACCTTCCCCCTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCGACTTAGAGGGAAGGAGGGTTAGGAGGAGGGACTTTGCATATTCTTGTATCCAGAGTCCCCAAACGTaGCACGCCAGCCTTACTATG | + |
|
Preference number: 2 (lower is better) Translates to: TDLEGRRVRRRDFAYSCIQSPQT*HASLTM Trigger: CATAGTAAGGCTGGCGTGGCACGTTTGGGGACTCTG...GATACAAGAATATGCAAAGTCCCTCCTCCTAACCCTCCTTCCCTCTAAGTCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR-3UTR GCA 90 bp | ATGCACACACCAACAAGAGCCGAGGGAAGACGGCCACTGTGTTCCAGCTGTTACGGAGGAACTAACATGTaGTCAAAACTACAACCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: MHTPTRAEGRRPLCSSCYGGTNM*SKLQPL Trigger: GAGAGGTTGTAGTTTTGAGCACATGTTAGTTCCTCC...GTAACAGCTGGAACACAGTGGCCGTCTTCCCTCGGCTCTTGTTGGTGTGTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR CAA 90 bp | AGGGAAGGAGGGTTAGGAGGAGGGACTTTGCATATTCTTGTATCTTaGGCAGACAGCTGTTCTAGCCTGGTTAAAGAGTCCCATGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: REGGLGGGTLHILVS*ADSCSSLVKESHGE Trigger: CTCTCCATGGGACTCTTTAACCAGGCTAGAACAGCTGTCTGCCAAAGATACAAGAATATGCAAAGTCCCTCCTCCTAACCCTCCTTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR-3UTR TCA 90 bp | AAAATACTAACGGTAAATAGCCTCAGATTTCAACACCCGAGTCAGAACAGAGACAATTACACATGGGGATaGAGCAGCAGCCACAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: KILTVNSLRFQHPSQNRDNYTWG*SSSHRA Trigger: TGCCCTGTGGCTGCTGCTTCATCCCCATGTGTAATT...GTCTCTGTTCTGACTCGGGTGTTGAAATCTGAGGCTATTTACCGTTAGTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
||
| 3UTR-3UTR CCA 90 bp | AAAGGTTCACACAGGCTAATAAAGAGGACGGTTTGCTACATGCAGGGAACCGCTGCGTTGCCACTTTCCTaGGAAAATACTCTAAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: KGSHRLIKRTVCYMQGTAALPLS*ENTLKF Trigger: GAACTTTAGAGTATTTTCCCAGGAAAGTGGCAACGC...AGCGGTTCCCTGCATGTAGCAAACCGTCCTCTTTATTAGCCTGTGTGAACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
||
| 3UTR-3UTR TCA 90 bp | CTAAGAAGCCCCAACGCTGACAGACACCAATATCAAAGGGGTAATTTAACAAGACTTCCCCTTCCCAAGTaGCCTAACAACTCATTAGAC | + |
|
Preference number: 2 (lower is better) Translates to: LRSPNADRHQYQRGNLTRLPLPK*PNNSLD Trigger: GTCTAATGAGTTGTTAGGTCACTTGGGAAGGGGAAG...TCTTGTTAAATTACCCCTTTGATATTGGTGTCTGTCAGCGTTGGGGCTTCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCGACTTAGAGGGAAGGAGGGTTAGGAGGAGGGACTTTGCATATTCTTGTATCTTCAGCATTCACACATaGATACTGAGTTCACTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: TDLEGRRVRRRDFAYSCIFSIHT*ILSSLK Trigger: TTTGAGTGAACTCAGTATGCATGTGTGAATGCTGAA...GATACAAGAATATGCAAAGTCCCTCCTCCTAACCCTCCTTCCCTCTAAGTCGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR GCA 72 bp | GGCAGAGCAGACCCGTTCCACACACCCACGCACCTGTaGACCCACGCACCCGGGCTGGAGGACCTCCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: GRADPFHTPTHL*THAPGLEDLLQ Trigger: CTGTAGGAGGTCCTCCAGCCCGGGTGCGTGGGTGCACAGGTGCGTGGGTGTGTGGAACGGGTCTGCTCTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR GCA 72 bp | CCCCTGAGACTTGCGGCTTGGGCACCTGGTAGGGACTaGCCTTGGCTCAAGGGTCCCAGTGTGCAGAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PLRLAAWAPGRD*PWLKGPSVQRK Trigger: CTTCCTCTGCACACTGGGACCCTTGAGCCAAGGGCAGTCCCTACCAGGTGCCCAAGCCGCAAGTCTCAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR GCA 72 bp | ACCTCCTACAGCCACTCTCACCTGACCTTCCTGCTCTaGTCACAACCCTGGAGCACACGGAGGCTGGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TSYSHSHLTFLL*SQPWSTRRLEA Trigger: TGCCTCCAGCCTCCGTGTGCTCCAGGGTTGTGAGCAGAGCAGGAAGGTCAGGTGAGAGTGGCTGTAGGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR CCA 72 bp | TACAACTTGCCACCCACACTGAGCAGCCTGCCCCGCTaGAGGAGGCCTTTTCATTCCCACCTGATTGCGGCC | + |
|
Preference number: 3 (lower is better) Translates to: YNLPPTLSSLPR*RRPFHSHLIAA Trigger: GGCCGCAATCAGGTGGGAATGAAAAGGCCTCCTCCAGCGGGGCAGGCTGCTCAGTGTGGGTGGCAAGTTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR CCA 72 bp | AGGTCCTCAGACAAAAGCCCCCTGAGACTTGCGGCTTaGGCACCTGGTAGGGACTGCCCTTGGCTCAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RSSDKSPLRLAA*APGRDCPWLKG Trigger: ACCCTTGAGCCAAGGGCAGTCCCTACCAGGTGCCCAAGCCGCAAGTCTCAGGGGGCTTTTGTCTGAGGACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR CCA 72 bp | GCAGGAAGAATGGCTGGGCATGCATGTGCTCTAGGGTaGCAGCGTCCTCAGAGACTGGCCCCAAGAAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: AGRMAGHACALG*QRPQRLAPRRS Trigger: GGACCTTCTTGGGGCCAGTCTCTGAGGACGCTGCCACCCTAGAGCACATGCATGCCCAGCCATTCTTCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR TCA 72 bp | AGACGGCTGACTCATGGTGACTACGGGCAGGAGTGCTaGGCAGTTAAGGAGCCACAGCTGCTCTGGGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: RRLTHGDYGQEC*AVKEPQLLWAV Trigger: CACTGCCCAGAGCAGCTGTGGCTCCTTAACTGCTCAGCACTCCTGCCCGTAGTCACCATGAGTCAGCCGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
||
| 3UTR TCA 72 bp | GGGAAGACGGCCACTGTGTTCCAGCTGTTACACACGTaGCAGAGGACACCTCTGCAACGGAATGCCCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GKTATVFQLLHT*QRTPLQRNAPR Trigger: CCTGGGGGCATTCCGTTGCAGAGGTGTCCTCTGTCACGTGTGTAACAGCTGGAACACAGTGGCCGTCTTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR GCA 72 bp | GACAGCTCACACCTGCTGACGCCATACAACCCGGTGTaGACGCAGCACATGCACACACCAACAAGAGCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: DSSHLLTPYNPV*TQHMHTPTRAE Trigger: CTCGGCTCTTGTTGGTGTGTGCATGTGCTGCGTGCACACCGGGTTGTATGGCGTCAGCAGGTGTGAGCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR GCA 72 bp | TTGACACTGGACTGCACGTATCAAGTGCTGCAGCCCTaGTGGAGGGACTGGCCATCTAGGGCTGGAGACCGA | + |
|
Preference number: 3 (lower is better) Translates to: LTLDCTYQVLQP*WRDWPSRAGDR Trigger: TCGGTCTCCAGCCCTAGATGGCCAGTCCCTCCAGCAGGGCTGCAGCACTTGATACGTGCAGTCCAGTGTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
||
| 3UTR CCA 72 bp | CACATTTCAACCCGAGTGGATTCCATGGGACACCAGTaGGCACCTGCCCAGGGAGCAAAGGCCTGTCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: HISTRVDSMGHQ*APAQGAKACPP Trigger: TGGAGGACAGGCCTTTGCTCCCTGGGCAGGTGCCCACTGGTGTCCCATGGAATCCACTCGGGTTGAAATGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR CCA 72 bp | ACAAGCAGCTCCGAGGCCAGAAGCAGGAAGAATGGCTaGGCATGCATGTGCTCTAGGGTGGCAGCGTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TSSSEARSRKNG*ACMCSRVAASS Trigger: TGAGGACGCTGCCACCCTAGAGCACATGCATGCCCAGCCATTCTTCCTGCTTCTGGCCTCGGAGCTGCTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR CCA 72 bp | CAGATGCCACTAAGAACAGGGCCAGACTGCAGTCGGTaGTACACAGCATGTGCCCAGCAACTCCGACTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QMPLRTGPDCSR*YTACAQQLRLA Trigger: TGCCAGTCGGAGTTGCTGGGCACATGCTGTGTACCACCGACTGCAGTCTGGCCCTGTTCTTAGTGGCATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| 3UTR CCA 72 bp | CCTTTCCTGCTGGAAGCTCATGCCTACTGCCCACCTTaGCCACCAGCCATCTTGGTGAAAGCGCCTGGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: PFLLEAHAYCPP*PPAILVKAPGL Trigger: TAAGCCAGGCGCTTTCACCAAGATGGCTGGTGGCCAAGGTGGGCAGTAGGCATGAGCTTCCAGCAGGAAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCCCTGAGACTTGCGGCTTGGGCACCTGGTAGGGACTGCCCTTGGCTCAAGGAAGGTGATATCTCATaGGCAGATGCCACTAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SPLRLAAWAPGRDCPWLKEGDIS*ADATKN Trigger: GTTCTTAGTGGCATCTGCCAATGAGATATCACCTTC...CTTGAGCCAAGGGCAGTCCCTACCAGGTGCCCAAGCCGCAAGTCTCAGGGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR-3UTR CAA 90 bp | ACGGTAAGGAAAACCTCATCTTCATCTCCTAGGCACCACGAGGCCCCACCAGACAGAACGGGTCAAGGCTaGTCCCAGCTCTGGCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TVRKTSSSSPRHHEAPPDRTGQG*SQLWPS Trigger: AGAAGGCCAGAGCTGGGACAAGCCTTGACCCGTTCT...GTCTGGTGGGGCCTCGTGGTGCCTAGGAGATGAAGATGAGGTTTTCCTTACCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR TCA 72 bp | AGTGTGGTACCTGGTGGGGTCAGATGGGGAAGCCAGTaGGGCAAGGCTGAAGCTTCTCATGGTTTCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SVVPGGVRWGSQ*GKAEASHGFRR Trigger: CCTCCTGAAACCATGAGAAGCTTCAGCCTTGCCTCACTGGCTTCCCCATCTGACCCCACCAGGTACCACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR TCA 72 bp | GCTGCCAGAGGTGAGTGTGGGCACCTATTTCAGGCCTaGGGACCTATCAGGGTAGACGGGAGTCATAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: AARGECGHLFQA*GPIRVDGSHSL Trigger: AAGGCTATGACTCCCGTCTACCCTGATAGGTCCTCAGGCCTGAAATAGGTGCCCACACTCACCTCTGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
||
| 3UTR GCA 72 bp | CTGCCTACTCTCTTGTCCTTTCCTGCTGGAAGCTCATaGCTACTGCCCACCTTGGCCACCAGCCATCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LPTLLSFPAGSS*LLPTLATSHLG Trigger: ACCAAGATGGCTGGTGGCCAAGGTGGGCAGTAGGCATGAGCTTCCAGCAGGAAAGGACAAGAGAGTAGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR GCA 72 bp | TGCACCTGTAAGCCTGCCTACTCTCTTGTCCTTTCCTaGTGGAAGCTCATGCCTACTGCCCACCTTGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: CTCKPAYSLVLS*WKLMPTAHLGH Trigger: GTGGCCAAGGTGGGCAGTAGGCATGAGCTTCCAGCAGGAAAGGACAAGAGAGTAGGCAGGCTTACAGGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR GCA 72 bp | ACAAGGGGAAGAGGGCAGGCGGAGAAGCACTCAGTCTaGACCTGTAAGCCTGCCTACTCTCTTGTCCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TRGRGQAEKHSV*TCKPAYSLVLS Trigger: GGAAAGGACAAGAGAGTAGGCAGGCTTACAGGTGCAGACTGAGTGCTTCTCCGCCTGCCCTCTTCCCCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR CCA 72 bp | AGGACACCTCTGCAACGGAATGCCCCCAGGTTTCTGTaGCCACACAGGAAAGTCCTTACCTCAGAGAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: RTPLQRNAPRFL*PHRKVLTSERS Trigger: GGACCTCTCTGAGGTAAGGACTTTCCTGTGTGGCCACAGAAACCTGGGGGCATTCCGTTGCAGAGGTGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 |
||
| 3UTR CCA 72 bp | ATGGAGAGATCCACATTTCAACCCGAGTGGATTCCATaGGACACCAGTGGGCACCTGCCCAGGGAGCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: MERSTFQPEWIP*DTSGHLPREQR Trigger: CCTTTGCTCCCTGGGCAGGTGCCCACTGGTGTCCCATGGAATCCACTCGGGTTGAAATGTGGATCTCTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR CCA 72 bp | AAGAGTCCCATGGAGAGATCCACATTTCAACCCGAGTaGATTCCATGGGACACCAGTGGGCACCTGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KSPMERSTFQPE*IPWDTSGHLPR Trigger: CCTGGGCAGGTGCCCACTGGTGTCCCATGGAATCCACTCGGGTTGAAATGTGGATCTCTCCATGGGACTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR CCA 72 bp | GGAACAAGAGGAGATCAAGGACACTGGGTGACAGTGTaGTACCTGGTGGGGTCAGATGGGGAAGCCAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GTRGDQGHWVTV*YLVGSDGEASE Trigger: CTCACTGGCTTCCCCATCTGACCCCACCAGGTACCACACTGTCACCCAGTGTCCTTGATCTCCTCTTGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR CCA 72 bp | CCCACCTTGGCCACCAGCCATCTTGGTGAAAGCGCCTaGCTTATGGTTATAGCCAGTCCATACAGGGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PTLATSHLGESA*LMVIASPYRGR Trigger: TCTCCCCCTGTATGGACTGGCTATAACCATAAGCCAGGCGCTTTCACCAAGATGGCTGGTGGCCAAGGTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR TCA 72 bp | AGGGACTGGCCATCTAGGGCTGGAGACCGACCAACGTaGTGGGATCCAAGGCTCTCACTAACAGGAAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: RDWPSRAGDRPT*WDPRLSLTGNG Trigger: TCCATTTCCTGTTAGTGAGAGCCTTGGATCCCATCACGTTGGTCGGTCTCCAGCCCTAGATGGCCAGTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
||
| 3UTR GCA 72 bp | TCTCATTGGCAGATGCCACTAAGAACAGGGCCAGACTaGAGTCGGTGGTACACAGCATGTGCCCAGCAACTC | + |
|
Preference number: 3 (lower is better) Translates to: SHWQMPLRTGPD*SRWYTACAQQL Trigger: GAGTTGCTGGGCACATGCTGTGTACCACCGACTGCAGTCTGGCCCTGTTCTTAGTGGCATCTGCCAATGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| 3UTR GCA 72 bp | GTTACACACGTGACAGAGGACACCTCTGCAACGGAATaGCCCCAGGTTTCTGTGGCCACACAGGAAAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VTHVTEDTSATE*PQVSVATQESP Trigger: AGGACTTTCCTGTGTGGCCACAGAAACCTGGGGGCATTCCGTTGCAGAGGTGTCCTCTGTCACGTGTGTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 |
||
| 3UTR GCA 72 bp | TGTTCCAGCTGTTACACACGTGACAGAGGACACCTCTaGAACGGAATGCCCCCAGGTTTCTGTGGCCACACA | + |
|
Preference number: 3 (lower is better) Translates to: CSSCYTRDRGHL*NGMPPGFCGHT Trigger: TGTGTGGCCACAGAAACCTGGGGGCATTCCGTTGCAGAGGTGTCCTCTGTCACGTGTGTAACAGCTGGAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR GCA 72 bp | CAGCTCTGGCCTTCTGAAGGACCTAACTCTCCAGGATaGACAGGCAAGGCTTGTTTCTGGGAAGGAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QLWPSEGPNSPG*TGKACFWEGSQ Trigger: CTGGCTTCCTTCCCAGAAACAAGCCTTGCCTGTGCATCCTGGAGAGTTAGGTCCTTCAGAAGGCCAGAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR CCA 72 bp | AGACTGACGTCATCACCAAAACCCAAGATGGCTGCGTaGATCTTCTCGGTCGCCTCAACACCACTCCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RLTSSPKPKMAA*IFSVASTPLLQ Trigger: CTGCAGGAGTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCATCTTGGGTTTTGGTGATGACGTCAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| 3UTR CCA 72 bp | CAAGCAGAAAGGGGAACAAGAGGAGATCAAGGACACTaGGTGACAGTGTGGTACCTGGTGGGGTCAGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: QAERGTRGDQGH*VTVWYLVGSDG Trigger: CCCATCTGACCCCACCAGGTACCACACTGTCACCCAGTGTCCTTGATCTCCTCTTGTTCCCCTTTCTGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGCAGCGTCCTCAGAGACTGGCCCCAAGAAGGTCCTCAGACAAAAGCCCCCCATATTCTTGTATCTTaGGCAGACAGCTGTTCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: GGSVLRDWPQEGPQTKAPHILVS*ADSCSS Trigger: GCTAGAACAGCTGTCTGCCAAAGATACAAGAATATG...GGGGGCTTTTGTCTGAGGACCTTCTTGGGGCCAGTCTCTGAGGACGCTGCCACC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR-3UTR CAA 90 bp | GCATGTGCTCTAGGGTGGCAGCGTCCTCAGAGACTGGCCCCAAGAAGGTCCTCAAACACCACACACTTTTaGGAACTCAAACACCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ACALGWQRPQRLAPRRSSNTTHF*ELKHPD Trigger: GTCTGGGTGTTTGAGTTCCAAAAAGTGTGTGGTGTT...TGAGGACCTTCTTGGGGCCAGTCTCTGAGGACGCTGCCACCCTAGAGCACATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR TCA 72 bp | ATGCCTACTGCCCACCTTGGCCACCAGCCATCTTGGTaGAAGCGCCTGGCTTATGGTTATAGCCAGTCCATA | + |
|
Preference number: 3 (lower is better) Translates to: MPTAHLGHQPSW*KRLAYGYSQSI Trigger: TATGGACTGGCTATAACCATAAGCCAGGCGCTTTCACCAAGATGGCTGGTGGCCAAGGTGGGCAGTAGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR GCA 72 bp | CTGGGAAGGAAGCCAGGGTACCTGAGCCGTTACATTTaGCAAGTGAGGCTGCTACAAGCAGAAAGGGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: LGRKPGYLSRYI*QVRLLQAERGT Trigger: TGTTCCCCTTTCTGCTTGTAGCAGCCTCACTTGGCAAATGTAACGGCTCAGGTACCCTGGCTTCCTTCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR CCA 72 bp | GCTGAGCAGTTAAGGAGCCACAGCTGCTCTGGGCAGTaGTGGTCTAGCATTGTAGGTTTGCCACGAAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: AEQLRSHSCSGQ*WSSIVGLPRRS Trigger: ACTTCTTCGTGGCAAACCTACAATGCTAGACCACCACTGCCCAGAGCAGCTGTGGCTCCTTAACTGCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
||
| 3UTR TCA 72 bp | GTCAGAACAGAGACAGAAATGAATTACACATGGGGATaGAGCAGCAGCCACAGGGCACTCACACGGGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VRTETEMNYTWG*SSSHRALTRGR Trigger: TCTTCCCCGTGTGAGTGCCCTGTGGCTGCTGCTTCATCCCCATGTGTAATTCATTTCTGTCTCTGTTCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
||
| 3UTR GCA 72 bp | CATGCACATGTGCACACACACACCCACATGCACATGTaGACACATACCCACACACCCAGATTCTTCTCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: HAHVHTHTHMHM*THTHTPRFFSS Trigger: GCTTGAGAAGAATCTGGGTGTGTGGGTATGTGTGCACATGTGCATGTGGGTGTGTGTGTGCACATGTGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR CCA 72 bp | GAGATTAAAGAGGAGAGGGGGAAGGTGATATCTCATTaGCAGATGCCACTAAGAACAGGGCCAGACTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: EIKEERGKVISH*QMPLRTGPDCS Trigger: ACTGCAGTCTGGCCCTGTTCTTAGTGGCATCTGCCAATGAGATATCACCTTCCCCCTCTCCTCTTTAATCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| 3UTR CCA 72 bp | ACCATTCTATTCCAATCTCTGTGGCAGTTCCCCAGATaGTCTAAACTACTCCTGTCTGTGCACTGTCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TILFQSLWQFPR*SKLLLSVHCPS Trigger: GCTGGGACAGTGCACAGACAGGAGTAGTTTAGACCATCTGGGGAACTGCCACAGAGATTGGAATAGAATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
||
| 3UTR TCA 72 bp | CAGATTTCAACACCCGAGTCAGAACAGAGACAGAAATaGATTACACATGGGGATGAAGCAGCAGCCACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: QISTPESEQRQK*ITHGDEAAATG Trigger: CCCTGTGGCTGCTGCTTCATCCCCATGTGTAATTCATTTCTGTCTCTGTTCTGACTCGGGTGTTGAAATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
||
| 3UTR CCA 72 bp | GAAGAGGATGAGGAGGAACAAACACCACACACTTTTTaGAACTCAAACACCCAGACAGAGACAGAAGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: EEDEEEQTPHTF*NSNTQTETEAG Trigger: GCCTGCTTCTGTCTCTGTCTGGGTGTTTGAGTTCCAAAAAGTGTGTGGTGTTTGTTCCTCCTCATCCTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| 3UTR-3UTR CAA 90 bp | CTTAAAGGTTCTGAGTGCCTTGTAAACCATTCTATTCCAATCTCTGTGGCAGTTCATACGCAGCAAGCGTaGCCAGCCTTCAACCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LKGSECLVNHSIPISVAVHTQQA*PAFNLS Trigger: GGAAAGGTTGAAGGCTGGCAACGCTTGCTGCGTATG...AACTGCCACAGAGATTGGAATAGAATGGTTTACAAGGCACTCAGAACCTTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
||
| 3UTR TCA 72 bp | ATAGATAAGTACAAGGTTTTGCAGGAAGTGCTGTCTTaGCACTGGACTGCACGTATCAAGTGCTGCAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: IDKYKVLQEVLS*HWTARIKCCSP Trigger: AGGGCTGCAGCACTTGATACGTGCAGTCCAGTGTCAAGACAGCACTTCCTGCAAAACCTTGTACTTATCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
||
| 3UTR CCA 72 bp | AACGTGATGGGATCCAAGGCTCTCACTAACAGGAAATaGACAAATCAGCAAAATCAAACTAGTCAAACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: NVMGSKALTNRK*TNQQNQTSQTH Trigger: ATGAGTTTGACTAGTTTGATTTTGCTGATTTGTCCATTTCCTGTTAGTGAGAGCCTTGGATCCCATCACGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
||
| CDS-3UTR TCA 90 bp | CAGACAGAGACAGAAGCAGGCAGAGCAGACCCGTTCCACACACCCACGCACCTGGCTGGAACTCGGAGATaGGCACGTCCTTGTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTETEAGRADPFHTPTHLAGTRR*ARPCLW Trigger: CCACAGACAAGGACGTGCTCATCTCCGAGTTCCAGC...CAGGTGCGTGGGTGTGTGGAACGGGTCTGCTCTGCCTGCTTCTGTCTCTGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| CDS-3UTR GCA 90 bp | CAACCCGGTGTGCACGCAGCACATGCACACACCAACAAGAGCCGAGGGAAGACGTCCCTGGTACATGCCTaGTCTGCTGGGACTGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: QPGVHAAHAHTNKSRGKTSLVHA*SAGTAH Trigger: ATGTGCAGTCCCAGCAGAGCAGGCATGTACCAGGGA...CGTCTTCCCTCGGCTCTTGTTGGTGTGTGCATGTGCTGCGTGCACACCGGGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| CDS-3UTR GCA 90 bp | AACAGAGACAGAAATGAATTACACATGGGGATGAAGCAGCAGCCACAGGGCACTCCAGGGCCCACCACCTaGCCCTCCTCCGAGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: NRDRNELHMGMKQQPQGTPGPTT*PSSEGT Trigger: GGTGCCCTCGGAGGAGGGGCAGGTGGTGGGCCCTGG...AGTGCCCTGTGGCTGCTGCTTCATCCCCATGTGTAATTCATTTCTGTCTCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
||
| CDS-3UTR TCA 90 bp | CACCAAAACCCAAGATGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACTCCGCTGGAACTCGGAGATaGGCACGTCCTTGTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQNPRWLRGSSRSPQHHSAGTRR*ARPCLW Trigger: CCACAGACAAGGACGTGCTCATCTCCGAGTTCCAGC...GGAGTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCATCTTGGGTTTTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| CDS-3UTR TCA 90 bp | CAACCCGGTGTGCACGCAGCACATGCACACACCAACAAGAGCCGAGGGAAGACGGGTATCAGGGGGTATTaGCTCCCCTTCTCCTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: QPGVHAAHAHTNKSRGKTGIRGY*LPFSYG Trigger: ACCATAGGAGAAGGGGAGTCAATACCCCCTGATACC...CGTCTTCCCTCGGCTCTTGTTGGTGTGTGCATGTGCTGCGTGCACACCGGGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| CDS-3UTR TCA 90 bp | AGCCCCCTGAGACTTGCGGCTTGGGCACCTGGTAGGGACTGCCCTTGGCTCAAGTCCGCCAAGTTTTTATaGACTGGGTATCAGGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SPLRLAAWAPGRDCPWLKSAKFL*TGYQGV Trigger: TACCCCCTGATACCCAGTTCATAAAAACTTGGCGGA...CTTGAGCCAAGGGCAGTCCCTACCAGGTGCCCAAGCCGCAAGTCTCAGGGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| CDS-3UTR GCA 90 bp | ACTTTACTCAGGATAAACCCGCCCAGAGCGAGAAGGCACAGCAGGAGCCCGCTGTCCCTGGTACATGCCTaGTCTGCTGGGACTGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TLLRINPPRARRHSRSPLSLVHA*SAGTAH Trigger: ATGTGCAGTCCCAGCAGAGCAGGCATGTACCAGGGA...CAGCGGGCTCCTGCTGTGCCTTCTCGCTCTGGGCGGGTTTATCCTGAGTAAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
||
| CDS-3UTR CCA 90 bp | AAGATGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACTCCTGCAGTTCAGCGGGGTCCGTGCGATGTaGTCTGCAATCCAGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KMAAWIFSVASTPLLQFSGVRAM*SAIQRN Trigger: GTTCCTCTGGATTGCAGACCACATCGCACGGACCCC...GCTGAACTGCAGGAGTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCATCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233508.2 |
||
| CDS-3UTR TCA 90 bp | CATCACCAAAACCCAAGATGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACGCTGGAACTCGGAGATaGGCACGTCCTTGTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HHQNPRWLRGSSRSPQHHAGTRR*ARPCLW Trigger: CCACAGACAAGGACGTGCTCATCTCCGAGTTCCAGC...GTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCATCTTGGGTTTTGGTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| CDS-3UTR TCA 90 bp | ACTACGGGCAGGAGTGCTGAGCAGTTAAGGAGCCACAGCTGCTCTGGGCAGTGGACATGGAGGGCACACTaGTATTTGGGCTCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TTGRSAEQLRSHSCSGQWTWRAH*YLGSRS Trigger: ACTTCGAGAGCCCAAATATCAGTGTGCCCTCCATGT...CCACTGCCCAGAGCAGCTGTGGCTCCTTAACTGCTCAGCACTCCTGCCCGTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
||
| CDS-3UTR TCA 90 bp | GGTGTGCACGCAGCACATGCACACACCAACAAGAGCCGAGGGAAGACGGCCACTACATGGAGGGCACACTaGTATTTGGGCTCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVHAAHAHTNKSRGKTATTWRAH*YLGSRS Trigger: ACTTCGAGAGCCCAAATATCAGTGTGCCCTCCATGT...AGTGGCCGTCTTCCCTCGGCTCTTGTTGGTGTGTGCATGTGCTGCGTGCACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| CDS-3UTR GCA 90 bp | TGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACTCCTGCAGTTCAGCATTCCCGTGCGATGTGGTCTaGAATCCAGAGGAACCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WLRGSSRSPQHHSCSSAFPCDVV*NPEEPL Trigger: AAGGGGTTCCTCTGGATTGCAGACCACATCGCACGG...GAATGCTGAACTGCAGGAGTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233508.2 |
||
| CDS-3UTR TCA 90 bp | ATCACCAAAACCCAAGATGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACTGCTGGAACTCGGAGATaGGCACGTCCTTGTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ITKTQDGCVDLLGRLNTTAGTRR*ARPCLW Trigger: CCACAGACAAGGACGTGCTCATCTCCGAGTTCCAGC...AGTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCATCTTGGGTTTTGGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| CDS-3UTR TCA 90 bp | TTTCCTGCTGGAAGCTCATGCCTACTGCCCACCTTGGCCACCAGCCATCTTGGTGGTATCAGGGGGTATTaGCTCCCCTTCTCCTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FPAGSSCLLPTLATSHLGGIRGY*LPFSYG Trigger: ACCATAGGAGAAGGGGAGTCAATACCCCCTGATACC...ACCAAGATGGCTGGTGGCCAAGGTGGGCAGTAGGCATGAGCTTCCAGCAGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| CDS-3UTR TCA 90 bp | GATGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACTCCTGCAGTTCAGCATGGTATCAGGGGGTATTaGCTCCCCTTCTCCTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: DGCVDLLGRLNTTPAVQHGIRGY*LPFSYG Trigger: ACCATAGGAGAAGGGGAGTCAATACCCCCTGATACC...ATGCTGAACTGCAGGAGTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| CDS-3UTR TCA 90 bp | ACACCTAACTTCTCTCCCCTCCCCATCCCAGGTACCCATACGCAGCAAGCGTTGGGTATCAGGGGGTATTaGCTCCCCTTCTCCTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPNFSPLPIPGTHTQQALGIRGY*LPFSYG Trigger: ACCATAGGAGAAGGGGAGTCAATACCCCCTGATACC...CAACGCTTGCTGCGTATGGGTACCTGGGATGGGGAGGGGAGAGAAGTTAGGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
||
| CDS-3UTR TCA 90 bp | ACTACGGGCAGGAGTGCTGAGCAGTTAAGGAGCCACAGCTGCTCTGGGCAGTGGTCCGCCAAGTTTTTATaGACTGGGTATCAGGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TTGRSAEQLRSHSCSGQWSAKFL*TGYQGV Trigger: TACCCCCTGATACCCAGTTCATAAAAACTTGGCGGA...CCACTGCCCAGAGCAGCTGTGGCTCCTTAACTGCTCAGCACTCCTGCCCGTAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
||
| CDS-3UTR TCA 90 bp | ATCCCCGGCTCTCAAGCCACCGACTTAGAGGGAAGGAGGGTTAGGAGGAGGGACTCCGCCAAGTTTTTATaGACTGGGTATCAGGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IPGSQATDLEGRRVRRRDSAKFL*TGYQGV Trigger: TACCCCCTGATACCCAGTTCATAAAAACTTGGCGGA...GTCCCTCCTCCTAACCCTCCTTCCCTCTAAGTCGGTGGCTTGAGAGCCGGGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| CDS-3UTR TCA 90 bp | CCCGGGCTGGAGGACCTCCTACAGCCACTCTCACCTGACCTTCCTGCTCTGCTCGATGTGGCTGTGTGTTaGATTCCGTTTCAAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PGLEDLLQPLSPDLPALLDVAVC*IPFQKM Trigger: CATCTTTTGAAACGGAATTCAACACACAGCCACATC...GAGCAGAGCAGGAAGGTCAGGTGAGAGTGGCTGTAGGAGGTCCTCCAGCCCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| CDS-3UTR GCA 90 bp | AAACCCAAGATGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACTCCTGCAGAGGCAGCTGAACTTCTaGATGAGCTCCGGATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPKMAAWIFSVASTPLLQRQLNF*MSSGSK Trigger: CTTGGATCCGGAGCTCATGCAGAAGTTCAGCTGCCT...CTGCAGGAGTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCATCTTGGGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| 3UTR CAA 72 bp | AGCACTCAGTCTGCACCTGTAAGCCTGCCTACTCTCTaGTCCTTTCCTGCTGGAAGCTCATGCCTACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: STQSAPVSLPTL*SFPAGSSCLLP Trigger: GGGCAGTAGGCATGAGCTTCCAGCAGGAAAGGACAAGAGAGTAGGCAGGCTTACAGGTGCAGACTGAGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| CDS-3UTR TCA 90 bp | ATGCCCCCAGGTTTCTGTGGCCACACAGGAAAGTCCTTACCTCAGAGAGGTCCTGGTATCAGGGGGTATTaGCTCCCCTTCTCCTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: MPPGFCGHTGKSLPQRGPGIRGY*LPFSYG Trigger: ACCATAGGAGAAGGGGAGTCAATACCCCCTGATACC...AGGACCTCTCTGAGGTAAGGACTTTCCTGTGTGGCCACAGAAACCTGGGGGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCCCCAGGTTTCTGTGGCCACACAGGAAAGTCCTTACCTCAGAGAGGTCCTAGGCAGCTGAACTTCTaGATGAGCTCCGGATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: MPPGFCGHTGKSLPQRGPRQLNF*MSSGSK Trigger: CTTGGATCCGGAGCTCATGCAGAAGTTCAGCTGCCT...AGGACCTCTCTGAGGTAAGGACTTTCCTGTGTGGCCACAGAAACCTGGGGGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGGGGAAGGTGATATCTCATTGGCAGATGCCACTAAGAACAGGGCCAGATCCCTGGTACATGCCTaGTCTGCTGGGACTGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GEGEGDISLADATKNRARSLVHA*SAGTAH Trigger: ATGTGCAGTCCCAGCAGAGCAGGCATGTACCAGGGA...TCTGGCCCTGTTCTTAGTGGCATCTGCCAATGAGATATCACCTTCCCCCTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233508.2 |
||
| CDS-3UTR CCA 90 bp | CCAGATGGTCTAAACTACTCCTGTCTGTGCACTGTCCCAGCCTATCCATCCTGTGGACAGGGTTCTCTCTaGCCTCTCCTAGGGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PDGLNYSCLCTVPAYPSCGQGSL*PLLGQG Trigger: TCCTTGCCCTAGGAGAGGCCAGAGAGAACCCTGTCC...ACAGGATGGATAGGCTGGGACAGTGCACAGACAGGAGTAGTTTAGACCATCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
||
| 3UTR CAA 72 bp | TCTGGGAAGGAAGCCAGGGTACCTGAGCCGTTACATTaGCCAAGTGAGGCTGCTACAAGCAGAAAGGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SGKEARVPEPLH*PSEAATSRKGN Trigger: GTTCCCCTTTCTGCTTGTAGCAGCCTCACTTGGCAAATGTAACGGCTCAGGTACCCTGGCTTCCTTCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| CDS-3UTR GCA 90 bp | ATCACCAAAACCCAAGATGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACTAGGCAGCTGAACTTCTaGATGAGCTCCGGATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ITKTQDGCVDLLGRLNTTRQLNF*MSSGSK Trigger: CTTGGATCCGGAGCTCATGCAGAAGTTCAGCTGCCT...AGTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCATCTTGGGTTTTGGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| CDS-3UTR GCA 90 bp | CTAACTCTCCAGGATGCACAGGCAAGGCTTGTTTCTGGGAAGGAAGCCAGGGTAAGGCAGCTGAACTTCTaGATGAGCTCCGGATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTLQDAQARLVSGKEARVRQLNF*MSSGSK Trigger: CTTGGATCCGGAGCTCATGCAGAAGTTCAGCTGCCT...TACCCTGGCTTCCTTCCCAGAAACAAGCCTTGCCTGTGCATCCTGGAGAGTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| CDS-3UTR GCA 90 bp | CTTCAACCTTTCCCTGACCCAACTAAGAAACCTGCCTCGAGGAGCCAATCCAACTCCCTGGTACATGCCTaGTCTGCTGGGACTGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LQPFPDPTKKPASRSQSNSLVHA*SAGTAH Trigger: ATGTGCAGTCCCAGCAGAGCAGGCATGTACCAGGGA...GTTGGATTGGCTCCTCGAGGCAGGTTTCTTAGTTGGGTCAGGGAAAGGTTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGGGGAAGGTGATATCTCATTGGCAGATGCCACTAAGAACAGGGCCAGAACATGGAGGGCACACTaGTATTTGGGCTCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GEGEGDISLADATKNRARTWRAH*YLGSRS Trigger: ACTTCGAGAGCCCAAATATCAGTGTGCCCTCCATGT...TCTGGCCCTGTTCTTAGTGGCATCTGCCAATGAGATATCACCTTCCCCCTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| CDS-3UTR TCA 90 bp | AGAATAACGGAGCTGGACACTTTACTCAGGATAAACCCGCCCAGAGCGAGAAGGGGTATCAGGGGGTATTaGCTCCCCTTCTCCTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RITELDTLLRINPPRARRGIRGY*LPFSYG Trigger: ACCATAGGAGAAGGGGAGTCAATACCCCCTGATACC...CCTTCTCGCTCTGGGCGGGTTTATCCTGAGTAAAGTGTCCAGCTCCGTTATTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
||
| CDS-3UTR TCA 90 bp | CATCACCAAAACCCAAGATGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACTCCGCCAAGTTTTTATaGACTGGGTATCAGGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HHQNPRWLRGSSRSPQHHSAKFL*TGYQGV Trigger: TACCCCCTGATACCCAGTTCATAAAAACTTGGCGGA...GTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCATCTTGGGTTTTGGTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| CDS-3UTR TCA 90 bp | ATGCACACACCAACAAGAGCCGAGGGAAGACGGCCACTGTGTTCCAGCTGTTACTGTGACAGTCTATCCTaGTCTTGCTCGCTTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MHTPTRAEGRRPLCSSCYCDSLS*SCSLCS Trigger: TGAGCAAAGCGAGCAAGATCAGGATAGACTGTCACA...GTAACAGCTGGAACACAGTGGCCGTCTTCCCTCGGCTCTTGTTGGTGTGTGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114863.10 |
||
| CDS-3UTR TCA 90 bp | CATCACCAAAACCCAAGATGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACTGTGACAGTCTATCCTaGTCTTGCTCGCTTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HHQNPRWLRGSSRSPQHHCDSLS*SCSLCS Trigger: TGAGCAAAGCGAGCAAGATCAGGATAGACTGTCACA...GTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCATCTTGGGTTTTGGTGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114863.10 ENSMUST00000233131.2 |
||
| CDS-3UTR GCA 90 bp | AGAATAACGGAGCTGGACACTTTACTCAGGATAAACCCGCCCAGAGCGAGAAGGAGGCAGCTGAACTTCTaGATGAGCTCCGGATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RITELDTLLRINPPRARRRQLNF*MSSGSK Trigger: CTTGGATCCGGAGCTCATGCAGAAGTTCAGCTGCCT...CCTTCTCGCTCTGGGCGGGTTTATCCTGAGTAAAGTGTCCAGCTCCGTTATTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
||
| CDS-3UTR CCA 90 bp | CCTTACTATGACAGGCTTCCAGAGCAGGTCTGTCCTGTAGCATGCTGTCCCTTAGAGCCCCTTGCGATGTaGCTGTGTGTTGAATTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PYYDRLPEQVCPVACCPLEPLAM*LCVEFR Trigger: ACGGAATTCAACACACAGCCACATCGCAAGGGGCTC...TAAGGGACAGCATGCTACAGGACAGACCTGCTCTGGAAGCCTGTCATAGTAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114859.9 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGGGGAAGGTGATATCTCATTGGCAGATGCCACTAAGAACAGGGCCAGATCCGCCAAGTTTTTATaGACTGGGTATCAGGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GEGEGDISLADATKNRARSAKFL*TGYQGV Trigger: TACCCCCTGATACCCAGTTCATAAAAACTTGGCGGA...TCTGGCCCTGTTCTTAGTGGCATCTGCCAATGAGATATCACCTTCCCCCTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| CDS-3UTR CCA 90 bp | TTTACTCAGGATAAACCCGCCCAGAGCGAGAAGGCACAGCAGGAGCCCGCTGCACAAGTTTTTATGAACTaGGTATCAGGGGGTATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FTQDKPAQSEKAQQEPAAQVFMN*VSGGID Trigger: GTCAATACCCCCTGATACCCAGTTCATAAAAACTTG...TGCAGCGGGCTCCTGCTGTGCCTTCTCGCTCTGGGCGGGTTTATCCTGAGTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
||
| CDS-3UTR TCA 90 bp | CAGCCTTACTATGACAGGCTTCCAGAGCAGGTCTGTCCTGTAGCATGCTGTCCCGATGTGGCTGTGTGTTaGATTCCGTTTCAAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: QPYYDRLPEQVCPVACCPDVAVC*IPFQKM Trigger: CATCTTTTGAAACGGAATTCAACACACAGCCACATC...GGGACAGCATGCTACAGGACAGACCTGCTCTGGAAGCCTGTCATAGTAAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 |
||
| CDS-3UTR TCA 90 bp | AGAATAACGGAGCTGGACACTTTACTCAGGATAAACCCGCCCAGAGCGAGAAGGTGTGACAGTCTATCCTaGTCTTGCTCGCTTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RITELDTLLRINPPRARRCDSLS*SCSLCS Trigger: TGAGCAAAGCGAGCAAGATCAGGATAGACTGTCACA...CCTTCTCGCTCTGGGCGGGTTTATCCTGAGTAAAGTGTCCAGCTCCGTTATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
||
| CDS-3UTR TCA 90 bp | AACGGAGCTGGACACTTTACTCAGGATAAACCCGCCCAGAGCGAGAAGGCACAGATTTACAGAGCTCTGTaGCAGTCTATCCTGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NGAGHFTQDKPAQSEKAQIYRAL*QSILIL Trigger: CAAGATCAGGATAGACTGTCACAGAGCTCTGTAAAT...CTGTGCCTTCTCGCTCTGGGCGGGTTTATCCTGAGTAAAGTGTCCAGCTCCGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
||
| CDS-3UTR CCA 90 bp | GATGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACTCCTGCAGTTCAGCATCAAGTTTTTATGAACTaGGTATCAGGGGGTATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DGCVDLLGRLNTTPAVQHQVFMN*VSGGID Trigger: GTCAATACCCCCTGATACCCAGTTCATAAAAACTTG...ATGCTGAACTGCAGGAGTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| CDS-3UTR TCA 90 bp | ACCGACTTAGAGGGAAGGAGGGTTAGGAGGAGGGACTTTGCATATTCTTGTATCACATGGAGGGCACACTaGTATTTGGGCTCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TDLEGRRVRRRDFAYSCITWRAH*YLGSRS Trigger: ACTTCGAGAGCCCAAATATCAGTGTGCCCTCCATGT...GATACAAGAATATGCAAAGTCCCTCCTCCTAACCCTCCTTCCCTCTAAGTCGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| CDS-3UTR TCA 90 bp | AAAGGTTCACACAGGCTAATAAAGAGGACGGTTTGCTACATGCAGGGAACCGCTACATGGAGGGCACACTaGTATTTGGGCTCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KGSHRLIKRTVCYMQGTATWRAH*YLGSRS Trigger: ACTTCGAGAGCCCAAATATCAGTGTGCCCTCCATGT...AGCGGTTCCCTGCATGTAGCAAACCGTCCTCTTTATTAGCCTGTGTGAACCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
||
| CDS-3UTR TCA 90 bp | CCGACCAACGTGATGGGATCCAAGGCTCTCACTAACAGGAAATGGACAAATCAGTCCGCCAAGTTTTTATaGACTGGGTATCAGGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PTNVMGSKALTNRKWTNQSAKFL*TGYQGV Trigger: TACCCCCTGATACCCAGTTCATAAAAACTTGGCGGA...CTGATTTGTCCATTTCCTGTTAGTGAGAGCCTTGGATCCCATCACGTTGGTCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
||
| CDS-3UTR TCA 90 bp | ATCACCAAAACCCAAGATGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACTGATGTGGCTGTGTGTTaGATTCCGTTTCAAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ITKTQDGCVDLLGRLNTTDVAVC*IPFQKM Trigger: CATCTTTTGAAACGGAATTCAACACACAGCCACATC...AGTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCATCTTGGGTTTTGGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTTCAACCTTTCCCTGACCCAACTAAGAAACCTGCCTCGAGGAGCCAATCCGATGTGGCTGTGTGTTaGATTCCGTTTCAAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLQPFPDPTKKPASRSQSDVAVC*IPFQKM Trigger: CATCTTTTGAAACGGAATTCAACACACAGCCACATC...GGATTGGCTCCTCGAGGCAGGTTTCTTAGTTGGGTCAGGGAAAGGTTGAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
||
| CDS-3UTR TCA 90 bp | GGGGAAGGTGATATCTCATTGGCAGATGCCACTAAGAACAGGGCCAGACTGCAGATTTACAGAGCTCTGTaGCAGTCTATCCTGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GEGDISLADATKNRARLQIYRAL*QSILIL Trigger: CAAGATCAGGATAGACTGTCACAGAGCTCTGTAAAT...CTGCAGTCTGGCCCTGTTCTTAGTGGCATCTGCCAATGAGATATCACCTTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114863.10 ENSMUST00000233131.2 |
||
| CDS-3UTR CCA 90 bp | CATCACCAAAACCCAAGATGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACCAAGTTTTTATGAACTaGGTATCAGGGGGTATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HHQNPRWLRGSSRSPQHHQVFMN*VSGGID Trigger: GTCAATACCCCCTGATACCCAGTTCATAAAAACTTG...GTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCATCTTGGGTTTTGGTGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
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| CDS-3UTR CCA 90 bp | CCAGATGGTCTAAACTACTCCTGTCTGTGCACTGTCCCAGCCTATCCATCCTGTAGATCTCTTGCGATGTaGCTGTGTGTTGAATTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PDGLNYSCLCTVPAYPSCRSLAM*LCVEFR Trigger: ACGGAATTCAACACACAGCCACATCGCAAGAGATCT...ACAGGATGGATAGGCTGGGACAGTGCACAGACAGGAGTAGTTTAGACCATCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
||
| CDS-3UTR TCA 90 bp | AATAGCCTCAGATTTCAACACCCGAGTCAGAACAGAGACAGAAATGAATTACACGCTGGAACTCGGAGATaGGCACGTCCTTGTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSLRFQHPSQNRDRNELHAGTRR*ARPCLW Trigger: CCACAGACAAGGACGTGCTCATCTCCGAGTTCCAGC...GTGTAATTCATTTCTGTCTCTGTTCTGACTCGGGTGTTGAAATCTGAGGCTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
||
| CDS-3UTR GCA 90 bp | CTAAGAAGCCCCAACGCTGACAGACACCAATATCAAAGGGGTAATTTAACAAGATCCCTGGTACATGCCTaGTCTGCTGGGACTGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LRSPNADRHQYQRGNLTRSLVHA*SAGTAH Trigger: ATGTGCAGTCCCAGCAGAGCAGGCATGTACCAGGGA...TCTTGTTAAATTACCCCTTTGATATTGGTGTCTGTCAGCGTTGGGGCTTCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233508.2 |
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| CDS-3UTR CCA 90 bp | ATCACCAAAACCCAAGATGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACTCAAGTTTTTATGAACTaGGTATCAGGGGGTATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ITKTQDGCVDLLGRLNTTQVFMN*VSGGID Trigger: GTCAATACCCCCTGATACCCAGTTCATAAAAACTTG...AGTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCATCTTGGGTTTTGGTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
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| 3UTR CAA 72 bp | GGGTTAGGAGGAGGGACTTTGCATATTCTTGTATCTTaGGCAGACAGCTGTTCTAGCCTGGTTAAAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLGGGTLHILVS*ADSCSSLVKES Trigger: GGACTCTTTAACCAGGCTAGAACAGCTGTCTGCCAAAGATACAAGAATATGCAAAGTCCCTCCTCCTAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
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| CDS-3UTR TCA 90 bp | CTAAGAAGCCCCAACGCTGACAGACACCAATATCAAAGGGGTAATTTAACAAGAACATGGAGGGCACACTaGTATTTGGGCTCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRSPNADRHQYQRGNLTRTWRAH*YLGSRS Trigger: ACTTCGAGAGCCCAAATATCAGTGTGCCCTCCATGT...TCTTGTTAAATTACCCCTTTGATATTGGTGTCTGTCAGCGTTGGGGCTTCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
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| CDS-3UTR TCA 90 bp | TCAACACCACTCCTGCAGTTCAGCATTCACACATGCATACTGAGTTCACTCAAAATTTACAGAGCTCTGTaGCAGTCTATCCTGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: STPLLQFSIHTCILSSLKIYRAL*QSILIL Trigger: CAAGATCAGGATAGACTGTCACAGAGCTCTGTAAAT...TTTGAGTGAACTCAGTATGCATGTGTGAATGCTGAACTGCAGGAGTGGTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114863.10 ENSMUST00000233131.2 |
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| CDS-3UTR TCA 90 bp | AAAATACTAACGGTAAATAGCCTCAGATTTCAACACCCGAGTCAGAACAGAGACGATGTGGCTGTGTGTTaGATTCCGTTTCAAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: KILTVNSLRFQHPSQNRDDVAVC*IPFQKM Trigger: CATCTTTTGAAACGGAATTCAACACACAGCCACATC...GTCTCTGTTCTGACTCGGGTGTTGAAATCTGAGGCTATTTACCGTTAGTATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
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| CDS-3UTR CCA 90 bp | CTAAGAAGCCCCAACGCTGACAGACACCAATATCAAAGGGGTAATTTAACAAGACAAGTTTTTATGAACTaGGTATCAGGGGGTATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LRSPNADRHQYQRGNLTRQVFMN*VSGGID Trigger: GTCAATACCCCCTGATACCCAGTTCATAAAAACTTG...TCTTGTTAAATTACCCCTTTGATATTGGTGTCTGTCAGCGTTGGGGCTTCTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| CDS-3UTR CAA 90 bp | GGGTCCCAGTGTGCAGAGGAAGTAAGGGTCACACAGAAGCCCCGTCTCACGGGGGGGTATCAGGGGGTATaGACTCCCCTTCTCCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: GSQCAEEVRVTQKPRLTGGYQGV*TPLLLW Trigger: CCATAGGAGAAGGGGAGTCAATACCCCCTGATACCC...CCCCGTGAGACGGGGCTTCTGTGTGACCCTTACTTCCTCTGCACACTGGGACCC 60% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| CDS-3UTR CAA 90 bp | ACTTTACTCAGGATAAACCCGCCCAGAGCGAGAAGGCACAGCAGGAGCCCGCTGGGGTATCAGGGGGTATaGACTCCCCTTCTCCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: TLLRINPPRARRHSRSPLGYQGV*TPLLLW Trigger: CCATAGGAGAAGGGGAGTCAATACCCCCTGATACCC...CAGCGGGCTCCTGCTGTGCCTTCTCGCTCTGGGCGGGTTTATCCTGAGTAAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
||
| CDS-3UTR CAA 90 bp | CTTGCCACCCACACTGAGCAGCCTGCCCCGCTGGAGGAGGCCTTTTCATTCCCAGCTTGTAAGTTCCAGTaGGTCATGTCCAGGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LATHTEQPAPLEEAFSFPACKFQ*VMSRKK Trigger: CTTCTTCCTGGACATGACCAACTGGAACTTACAAGC...TGGGAATGAAAAGGCCTCCTCCAGCGGGGCAGGCTGCTCAGTGTGGGTGGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| CDS-3UTR CAA 90 bp | CAACCCGGTGTGCACGCAGCACATGCACACACCAACAAGAGCCGAGGGAAGACGGCTTGTAAGTTCCAGTaGGTCATGTCCAGGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QPGVHAAHAHTNKSRGKTACKFQ*VMSRKK Trigger: CTTCTTCCTGGACATGACCAACTGGAACTTACAAGC...CGTCTTCCCTCGGCTCTTGTTGGTGTGTGCATGTGCTGCGTGCACACCGGGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| CDS-3UTR CAA 90 bp | CATCACCAAAACCCAAGATGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACGGGTATCAGGGGGTATaGACTCCCCTTCTCCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: HHQNPRWLRGSSRSPQHHGYQGV*TPLLLW Trigger: CCATAGGAGAAGGGGAGTCAATACCCCCTGATACCC...GTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCATCTTGGGTTTTGGTGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| CDS-3UTR CAA 90 bp | TTTACTCAGGATAAACCCGCCCAGAGCGAGAAGGCACAGCAGGAGCCCGCTGCAGCTTGTAAGTTCCAGTaGGTCATGTCCAGGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FTQDKPAQSEKAQQEPAAACKFQ*VMSRKK Trigger: CTTCTTCCTGGACATGACCAACTGGAACTTACAAGC...TGCAGCGGGCTCCTGCTGTGCCTTCTCGCTCTGGGCGGGTTTATCCTGAGTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
||
| CDS-3UTR CAA 90 bp | TGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACTCCTGCAGTTCAGCATTCGCTTGTAAGTTCCAGTaGGTCATGTCCAGGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WLRGSSRSPQHHSCSSAFACKFQ*VMSRKK Trigger: CTTCTTCCTGGACATGACCAACTGGAACTTACAAGC...GAATGCTGAACTGCAGGAGTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| CDS-3UTR CAA 90 bp | CCTTACTATGACAGGCTTCCAGAGCAGGTCTGTCCTGTAGCATGCTGTCCCTTAGGGTATCAGGGGGTATaGACTCCCCTTCTCCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: PYYDRLPEQVCPVACCPLGYQGV*TPLLLW Trigger: CCATAGGAGAAGGGGAGTCAATACCCCCTGATACCC...TAAGGGACAGCATGCTACAGGACAGACCTGCTCTGGAAGCCTGTCATAGTAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAACCTTTCCCTGACCCAACTAAGAAACCTGCCTCGAGGAGCCAATCCAACGGGTATCAGGGGGTATaGACTCCCCTTCTCCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: LQPFPDPTKKPASRSQSNGYQGV*TPLLLW Trigger: CCATAGGAGAAGGGGAGTCAATACCCCCTGATACCC...GTTGGATTGGCTCCTCGAGGCAGGTTTCTTAGTTGGGTCAGGGAAAGGTTGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
||
| CDS-3UTR CAA 90 bp | CAGTGTGCAGAGGAAGTAAGGGTCACACAGAAGCCCCGTCTCACGGGGCTCCACCGATGTGGCTGTGTGTaGAATTCCGTTTCAAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: QCAEEVRVTQKPRLTGLHRCGCV*NSVSKD Trigger: ATCTTTTGAAACGGAATTCAACACACAGCCACATCG...GTGGAGCCCCGTGAGACGGGGCTTCTGTGTGACCCTTACTTCCTCTGCACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 |
||
| CDS-3UTR CAA 90 bp | TGGAGACCGACCAACGTGATGGGATCCAAGGCTCTCACTAACAGGAAATGGACAGGGCAAGGAGATCTCTaGCGATGTGGCTGTGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WRPTNVMGSKALTNRKWTGQGDL*RCGCVL Trigger: CAACACACAGCCACATCGCAAGAGATCTCCTTGCCC...TGTCCATTTCCTGTTAGTGAGAGCCTTGGATCCCATCACGTTGGTCGGTCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
||
| CDS-3UTR CAA 90 bp | CATCACCAAAACCCAAGATGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACGCTTGTAAGTTCCAGTaGGTCATGTCCAGGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HHQNPRWLRGSSRSPQHHACKFQ*VMSRKK Trigger: CTTCTTCCTGGACATGACCAACTGGAACTTACAAGC...GTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCATCTTGGGTTTTGGTGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 ENSMUST00000233508.2 |
||
| CDS-3UTR CAA 90 bp | CACCAAAACCCAAGATGGCTGCGTGGATCTTCTCGGTCGCCTCAACACCACTCCCGATGTGGCTGTGTGTaGAATTCCGTTTCAAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HQNPRWLRGSSRSPQHHSRCGCV*NSVSKD Trigger: ATCTTTTGAAACGGAATTCAACACACAGCCACATCG...GGAGTGGTGTTGAGGCGACCGAGAAGATCCACGCAGCCATCTTGGGTTTTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCTTACTATGACAGGCTTCCAGAGCAGGTCTGTCCTGTAGCATGCTGTCCCCGATGTGGCTGTGTGTaGAATTCCGTTTCAAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: QPYYDRLPEQVCPVACCPRCGCV*NSVSKD Trigger: ATCTTTTGAAACGGAATTCAACACACAGCCACATCG...GGGACAGCATGCTACAGGACAGACCTGCTCTGGAAGCCTGTCATAGTAAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114859.9 ENSMUST00000114863.10 ENSMUST00000233131.2 |
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| CDS-3UTR CAA 90 bp | AACAGAGACAGAAATGAATTACACATGGGGATGAAGCAGCAGCCACAGGGCACTCGATGTGGCTGTGTGTaGAATTCCGTTTCAAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: NRDRNELHMGMKQQPQGTRCGCV*NSVSKD Trigger: ATCTTTTGAAACGGAATTCAACACACAGCCACATCG...AGTGCCCTGTGGCTGCTGCTTCATCCCCATGTGTAATTCATTTCTGTCTCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075076.6 |
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| CDS-3UTR CAA 90 bp | AAAGGTTCACACAGGCTAATAAAGAGGACGGTTTGCTACATGCAGGGAACCGCTCGATGTGGCTGTGTGTaGAATTCCGTTTCAAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: KGSHRLIKRTVCYMQGTARCGCV*NSVSKD Trigger: ATCTTTTGAAACGGAATTCAACACACAGCCACATCG...AGCGGTTCCCTGCATGTAGCAAACCGTCCTCTTTATTAGCCTGTGTGAACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233533.2 |
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