Pregenerated sensors for ILKAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026309Ensembl transcript IDs: ENSMUST00000027534.13, ENSMUST00000186986.7, ENSMUST00000187049.7, ENSMUST00000187231.2, ENSMUST00000187306.7, ENSMUST00000187678.7, ENSMUST00000190519.2
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGTTGTCTGCTGAGCCCCGCTGCACTGCCTTGTTGGCCAGCCTGTTaGATGCAGCTTCATAGCGGGCATCAACAGCAGGCTTCCCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: RCLLSPAALPCWPAC*MQLHSGHQQQASLP Trigger: GGGAAGGGAAGCCTGCTGTTGATGCCCGCTATGAAGCTGCATGCAACAGGCTGGCCAACAAGGCAGTGCAGCGGGGCTCAGCAGACAACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
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| 3UTR CCA 90 bp | CCATCACCGTCACGTTGTCTGCTGAGCCCCGCTGCACTGCCTTGTTaGCCAGCCTGTTGCATGCAGCTTCATAGCGGGCATCAACAGCAG | + |
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Preference number: 1 (lower is better) Translates to: PSPSRCLLSPAALPC*PACCMQLHSGHQQQ Trigger: CTGCTGTTGATGCCCGCTATGAAGCTGCATGCAACAGGCTGGCCAACAAGGCAGTGCAGCGGGGCTCAGCAGACAACGTGACGGTGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
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| 3UTR CCA 90 bp | CAAGGTTGGCGATATACAGGATGTTGTCCACAGCCAGGACACACGTaGCAGTGGACCCGTCTTTCCAGGCAGGCTTCTGGCTTGAAGCCT | + |
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Preference number: 1 (lower is better) Translates to: QGWRYTGCCPQPGHT*QWTRLSRQASGLKP Trigger: AGGCTTCAAGCCAGAAGCCTGCCTGGAAAGACGGGTCCACTGCCACGTGTGTCCTGGCTGTGGACAACATCCTGTATATCGCCAACCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR CCA 90 bp | TGGCGATATACAGGATGTTGTCCACAGCCAGGACACACGTGGCAGTaGACCCGTCTTTCCAGGCAGGCTTCTGGCTTGAAGCCTGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: WRYTGCCPQPGHTWQ*TRLSRQASGLKPVS Trigger: TGAAACAGGCTTCAAGCCAGAAGCCTGCCTGGAAAGACGGGTCCACTGCCACGTGTGTCCTGGCTGTGGACAACATCCTGTATATCGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR CCA 90 bp | AGGCCACAGTGCCAAGAGTTACCCAGACAGAAGCACTTGGGGACATaGGTCACAGCCTATGGGGCACTGAATGATTCCTGGGCTGCTATG | + |
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Preference number: 1 (lower is better) Translates to: RPQCQELPRQKHLGT*VTAYGALNDSWAAM Trigger: CATAGCAGCCCAGGAATCATTCAGTGCCCCATAGGCTGTGACCCATGTCCCCAAGTGCTTCTGTCTGGGTAACTCTTGGCACTGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR GCA 90 bp | CTGTCTGTATGCCAGGCTGCCCAGGTCCTAGTCTCCAAGCAGGATTaGTGTCTCTCAGTCCCTGTAGACAGGGTAGCGCTAATGTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: LSVCQAAQVLVSKQD*CLSVPVDRVALMFL Trigger: CAAGAACATTAGCGCTACCCTGTCTACAGGGACTGAGAGACAGCAATCCTGCTTGGAGACTAGGACCTGGGCAGCCTGGCATACAGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR CCA 90 bp | AGGCTTCCCTTCCCGGGTCTGGATCTTGTCATCCTACCAAAGGGATaGGATCTGAGTGAACAGGGCACCAGCCTCTGTCATTCTTTTAAG | + |
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Preference number: 1 (lower is better) Translates to: RLPFPGLDLVILPKG*DLSEQGTSLCHSFK Trigger: CTTAAAAGAATGACAGAGGCTGGTGCCCTGTTCACTCAGATCCCATCCCTTTGGTAGGATGACAAGATCCAGACCCGGGAAGGGAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
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| 3UTR TCA 90 bp | CTGACATTCCCTCCAGCTTTCTGTATCCTCATGCGCTCTTCATACTaGGTTGGGTTGTGCTCTTTGCTGAGGCTTAAGGCTGCGTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: LTFPPAFCILMRSSY*VGLCSLLRLKAACF Trigger: GAAGCACGCAGCCTTAAGCCTCAGCAAAGAGCACAACCCAACTCAGTATGAAGAGCGCATGAGGATACAGAAAGCTGGAGGGAATGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR TCA 90 bp | CCTTCCCGGGTCTGGATCTTGTCATCCTACCAAAGGGATGGGATCTaGGTGAACAGGGCACCAGCCTCTGTCATTCTTTTAAGACACTAC | + |
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Preference number: 1 (lower is better) Translates to: PSRVWILSSYQRDGI*VNRAPASVILLRHY Trigger: GTAGTGTCTTAAAAGAATGACAGAGGCTGGTGCCCTGTTCACTCAGATCCCATCCCTTTGGTAGGATGACAAGATCCAGACCCGGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
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| 3UTR GCA 90 bp | CTTCCTGCCTCTAATCAGGTGTTGGGGCTATCTATAGGCATGTACTaGCATGTCTGGTTTATGGTGAAGGAACCCAGGATCCCAAGCATG | + |
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Preference number: 1 (lower is better) Translates to: LPASNQVLGLSIGMY*HVWFMVKEPRIPSM Trigger: CATGCTTGGGATCCTGGGTTCCTTCACCATAAACCAGACATGGCAGTACATGCCTATAGATAGCCCCAACACCTGATTAGAGGCAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR CCA 90 bp | AGCATCTGCAGCACATTTTCTAACTGGCCAACAGTGATACGGCTGTaGAGGAGGAGGACAGTGACTGTCATAAAACAGGTCTGGAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: SICSTFSNWPTVIRL*RRRTVTVIKQVWKG Trigger: GCCTTTCCAGACCTGTTTTATGACAGTCACTGTCCTCCTCCTCCACAGCCGTATCACTGTTGGCCAGTTAGAAAATGTGCTGCAGATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR TCA 90 bp | GTATCCTCATGCGCTCTTCATACTGAGTTGGGTTGTGCTCTTTGCTaGGGCTTAAGGCTGCGTGCTTCTGACTTTCCTCATTATATCGAC | + |
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Preference number: 1 (lower is better) Translates to: VSSCALHTELGCALC*GLRLRASDFPHYID Trigger: GTCGATATAATGAGGAAAGTCAGAAGCACGCAGCCTTAAGCCTCAGCAAAGAGCACAACCCAACTCAGTATGAAGAGCGCATGAGGATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR TCA 90 bp | GTCATCCTCTCAGGGCTCACTTCAGGGAAACAGGAACGAGATGAATaGAGTTGTCTAGGAACCTCAAGGCAGGACAAGATGAAGTTCACA | + |
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Preference number: 1 (lower is better) Translates to: VILSGLTSGKQERDE*SCLGTSRQDKMKFT Trigger: TGTGAACTTCATCTTGTCCTGCCTTGAGGTTCCTAGACAACTTCATTCATCTCGTTCCTGTTTCCCTGAAGTGAGCCCTGAGAGGATGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR TCA 90 bp | GACAGTCATCCTCTCAGGGCTCACTTCAGGGAAACAGGAACGAGATaGATGAAGTTGTCTAGGAACCTCAAGGCAGGACAAGATGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: DSHPLRAHFRETGTR*MKLSRNLKAGQDEV Trigger: AACTTCATCTTGTCCTGCCTTGAGGTTCCTAGACAACTTCATTCATCTCGTTCCTGTTTCCCTGAAGTGAGCCCTGAGAGGATGACTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR CCA 90 bp | TCTAGGAACCTCAAGGCAGGACAAGATGAAGTTCACAGCTTCTTCTaGGGTAAAGACCTTGAAAAGCCCGTCGCAAGCCAGCAAAATGAA | + |
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Preference number: 1 (lower is better) Translates to: SRNLKAGQDEVHSFF*GKDLEKPVASQQNE Trigger: TTCATTTTGCTGGCTTGCGACGGGCTTTTCAAGGTCTTTACCCCAGAAGAAGCTGTGAACTTCATCTTGTCCTGCCTTGAGGTTCCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR CCA 90 bp | CTTGTCATCCTCAAGGCAGGACAAGATGAAGTTCACAGCTTCTTCTaGGGTAAAGACCTTGAAAAGCCCGTCGCAAGCCAGCAAAATGAA | + |
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Preference number: 1 (lower is better) Translates to: LVILKAGQDEVHSFF*GKDLEKPVASQQNE Trigger: TTCATTTTGCTGGCTTGCGACGGGCTTTTCAAGGTCTTTACCCCAGAAGAAGCTGTGAACTTCATCTTGTCCTGCCTTGAGGATGACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187678.7 |
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| 3UTR TCA 90 bp | AAGTATGAAACCCGAGTAATGAGAGATGATGGAGGATTACACTCCTaGGTGATATCGTTCAGGATGACATGGGCATCCTGCATCTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: KYETRVMRDDGGLHS*VISFRMTWASCISS Trigger: GGAGGAGATGCAGGATGCCCATGTCATCCTGAACGATATCACTCAGGAGTGTAATCCTCCATCATCTCTCATTACTCGGGTTTCATACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186986.7 ENSMUST00000187049.7 |
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| 3UTR GCA 90 bp | ACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTaGACAAACAAAATGAACCTGCAAGTCAAGAGCACACGCCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: TFIYNHGSPTGVHTA*TNKMNLQVKSTRQC Trigger: ACACTGGCGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
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| 3UTR GCA 90 bp | GCAGGCTTCTGGCTTGAAGCCTGTTTCAGGAACTCTTCATCGGTGTaGTTAAAAGTATCTAGCAGACACCTCTTTACAGTCTTCTCCACA | + |
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Preference number: 1 (lower is better) Translates to: AGFWLEACFRNSSSV*LKVSSRHLFTVFST Trigger: TGTGGAGAAGACTGTAAAGAGGTGTCTGCTAGATACTTTTAAGCACACCGATGAAGAGTTCCTGAAACAGGCTTCAAGCCAGAAGCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR CCA 90 bp | CACTGGGCCCACAGTGTTATTTTGAAAGGTTTTTATTCCTCTGTGTaGAGTACATGCAGAGGTCAACTTAGGGTGTTCCTCAGGAGCCAA | + |
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Preference number: 1 (lower is better) Translates to: HWAHSVILKGFYSSV*STCRGQLRVFLRSQ Trigger: TTGGCTCCTGAGGAACACCCTAAGTTGACCTCTGCATGTACTCCACACAGAGGAATAAAAACCTTTCAAAATAACACTGTGGGCCCAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR TCA 90 bp | ACAGAAGCACTTGGGGACATGGGTCACAGCCTATGGGGCACTGAATaGTTCCTGGGCTGCTATGAAATTGCTAAATTAAACTGTTTAGCT | + |
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Preference number: 1 (lower is better) Translates to: TEALGDMGHSLWGTE*FLGCYEIAKLNCLA Trigger: AGCTAAACAGTTTAATTTAGCAATTTCATAGCAGCCCAGGAATCATTCAGTGCCCCATAGGCTGTGACCCATGTCCCCAAGTGCTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR TCA 90 bp | TATTTGAATTGCATTTATTTGGGAGGTACGGATATGGAGATCAGATaGCAGCCACAGCAGTTGGTTCTCTTACTTTGTGGGTCCTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: YLNCIYLGGTDMEIR*QPQQLVLLLCGSWR Trigger: TCTCCAGGACCCACAAAGTAAGAGAACCAACTGCTGTGGCTGTCATCTGATCTCCATATCCGTACCTCCCAAATAAATGCAATTCAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR GCA 90 bp | CACAGTGTTATTTTGAAAGGTTTTTATTCCTCTGTGTGGAGTACATaGAGAGGTCAACTTAGGGTGTTCCTCAGGAGCCAAGCACTTTGT | + |
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Preference number: 1 (lower is better) Translates to: HSVILKGFYSSVWST*RGQLRVFLRSQALC Trigger: ACAAAGTGCTTGGCTCCTGAGGAACACCCTAAGTTGACCTCTGCATGTACTCCACACAGAGGAATAAAAACCTTTCAAAATAACACTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR-3UTR TCA 90 bp | GTTGCATGCAGCTTCATAGCGGGCATCAACAGCAGGCTTCCCTTCCCGGGTCTGGGGATGGGATCTGAGTaGACAGGGCACCAGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: VACSFIAGINSRLPFPGLGMGSE*TGHQPL Trigger: CAGAGGCTGGTGCCCTGTTCACTCAGATCCCATCCC...CAGACCCGGGAAGGGAAGCCTGCTGTTGATGCCCGCTATGAAGCTGCATGCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
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| 3UTR-3UTR TCA 90 bp | ACGTTGTCTGCTGAGCCCCGCTGCACTGCCTTGTTGGCCAGCCTGTTGCATGCACAAAGGGATGGGATCTaGGTGAACAGGGCACCAGCC | + |
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Preference number: 2 (lower is better) Translates to: TLSAEPRCTALLASLLHAQRDGI*VNRAPA Trigger: GGCTGGTGCCCTGTTCACTCAGATCCCATCCCTTTG...TGCATGCAACAGGCTGGCCAACAAGGCAGTGCAGCGGGGCTCAGCAGACAACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
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| 3UTR CAA 90 bp | AGCTGGCAGCGTCTGATATCAGGCACAGATGTGACCCCACAGCGCTaGTACTGCCCATCTCCAATGGAACGCGATACCTCCAGCACGCCC | + |
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Preference number: 2 (lower is better) Translates to: SWQRLISGTDVTPQR*YCPSPMERDTSSTP Trigger: GGGCGTGCTGGAGGTATCGCGTTCCATTGGAGATGGGCAGTACAAGCGCTGTGGGGTCACATCTGTGCCTGATATCAGACGCTGCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187049.7 ENSMUST00000187678.7 |
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| 3UTR-3UTR GCA 90 bp | GCATGCAGCTTCATAGCGGGCATCAACAGCAGGCTTCCCTTCCCGGGTCTGGATCACCAGGGCAGGGCCTaGTCTGTCCCTAACAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: ACSFIAGINSRLPFPGLDHQGRA*SVPNKD Trigger: GTCTTTGTTAGGGACAGAGCAGGCCCTGCCCTGGTG...ATCCAGACCCGGGAAGGGAAGCCTGCTGTTGATGCCCGCTATGAAGCTGCATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
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| 3UTR CAA 90 bp | CACAGGATTGCCCGACTATCTCCAAGGTTGGCGATATACAGGATGTaGTCCACAGCCAGGACACACGTGGCAGTGGACCCGTCTTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: HRIARLSPRLAIYRM*STARTHVAVDPSFQ Trigger: CTGGAAAGACGGGTCCACTGCCACGTGTGTCCTGGCTGTGGACAACATCCTGTATATCGCCAACCTTGGAGATAGTCGGGCAATCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR-3UTR TCA 90 bp | TCTGTATGCCAGGCTGCCCAGGTCCTAGTCTCCAAGCAGGATTGCTGTCTCTCAGGTTGTGCTCTTTGCTaGGGCTTAAGGCTGCGTGCT | + |
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Preference number: 2 (lower is better) Translates to: SVCQAAQVLVSKQDCCLSGCALC*GLRLRA Trigger: AGCACGCAGCCTTAAGCCTCAGCAAAGAGCACAACC...TGAGAGACAGCAATCCTGCTTGGAGACTAGGACCTGGGCAGCCTGGCATACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR-3UTR GCA 90 bp | AGGTTGGCGATATACAGGATGTTGTCCACAGCCAGGACACACGTGGCAGTGGACATGACATGGGCATCCTaGATCTCCTCCCTCTCACCC | + |
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Preference number: 2 (lower is better) Translates to: RLAIYRMLSTARTHVAVDMTWAS*ISSLSP Trigger: GGGTGAGAGGGAGGAGATGCAGGATGCCCATGTCAT...GTCCACTGCCACGTGTGTCCTGGCTGTGGACAACATCCTGTATATCGCCAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR-3UTR GCA 90 bp | GCAGGCTTCCCTTCCCGGGTCTGGATCTTGTCATCCTACCAAAGGGATGGGATCAGACTGGCAGGACAGTaGCTGGTGAGCTCCATAACA | + |
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Preference number: 2 (lower is better) Translates to: AGFPSRVWILSSYQRDGIRLAGQ*LVSSIT Trigger: TGTTATGGAGCTCACCAGGCACTGTCCTGCCAGTCT...GATCCCATCCCTTTGGTAGGATGACAAGATCCAGACCCGGGAAGGGAAGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGCGTCTGATATCAGGCACAGATGTGACCCCACAGCGCTTGTACTGCCCATCGTTCAGGATGACATaGGCATCCTGCATCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: WQRLISGTDVTPQRLYCPSFRMT*ASCISS Trigger: GGAGGAGATGCAGGATGCCCATGTCATCCTGAACGA...TGGGCAGTACAAGCGCTGTGGGGTCACATCTGTGCCTGATATCAGACGCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR-3UTR TCA 90 bp | TCTGTATGCCAGGCTGCCCAGGTCCTAGTCTCCAAGCAGGATTGCTGTCTCTCAAGACACGCCCATCTCTaGCATTCCCTCCAGCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: SVCQAAQVLVSKQDCCLSRHAHL*HSLQLS Trigger: AGAAAGCTGGAGGGAATGTCAGAGATGGGCGTGTCT...TGAGAGACAGCAATCCTGCTTGGAGACTAGGACCTGGGCAGCCTGGCATACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR-3UTR TCA 90 bp | CCAGGACGACAGTCATCCTCTCAGGGCTCACTTCAGGGAAACAGGAACGAGATGCGCAAGCCAGCAAAATaGACCTGTCATTGGGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: PGRQSSSQGSLQGNRNEMRKPAK*TCHWGS Trigger: TGACCCCCAATGACAGGTTCATTTTGCTGGCTTGCG...CATCTCGTTCCTGTTTCCCTGAAGTGAGCCCTGAGAGGATGACTGTCGTCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR-3UTR CCA 90 bp | CACTGCCTTGTTGGCCAGCCTGTTGCATGCAGCTTCATAGCGGGCATCAACAGCATCCTACCAAAGGGATaGGATCTGAGTGAACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: HCLVGQPVACSFIAGINSILPKG*DLSEQG Trigger: GCCCTGTTCACTCAGATCCCATCCCTTTGGTAGGAT...GCTGTTGATGCCCGCTATGAAGCTGCATGCAACAGGCTGGCCAACAAGGCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGGTTTATGGTGAAGGAACCCAGGATCCCAAGCATGCTAGGAAAGCCCTCTTCCAGGCAGGCTTCTaGCTTGAAGCCTGTTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: CLVYGEGTQDPKHARKALFQAGF*LEACFR Trigger: CCTGAAACAGGCTTCAAGCCAGAAGCCTGCCTGGAA...GAGGGCTTTCCTAGCATGCTTGGGATCCTGGGTTCCTTCACCATAAACCAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR-3UTR GCA 90 bp | GGACAAGATGAAGTTCACAGCTTCTTCTGGGGTAAAGACCTTGAAAAGCCCGTCCTCACCCTTCCGCTCTaGCACATAGCCTTTCAGACC | + |
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Preference number: 2 (lower is better) Translates to: GQDEVHSFFWGKDLEKPVLTLPL*HIAFQT Trigger: GGTCTGAAAGGCTATGTGGCAGAGCGGAAGGGTGAG...GACGGGCTTTTCAAGGTCTTTACCCCAGAAGAAGCTGTGAACTTCATCTTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR-3UTR GCA 90 bp | CTGGTTTATGGTGAAGGAACCCAGGATCCCAAGCATGCTAGGAAAGCCCTCCACCTGGTGCAAATTCTGTaGAGCAAATTTCGAGGCTCG | + |
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Preference number: 2 (lower is better) Translates to: LVYGEGTQDPKHARKALHLVQIL*SKFRGS Trigger: CGAGCCTCGAAATTTGCTGCACAGAATTTGCACCAG...GTGGAGGGCTTTCCTAGCATGCTTGGGATCCTGGGTTCCTTCACCATAAACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGGTTTATGGTGAAGGAACCCAGGATCCCAAGCATGCTAGGAAAGCCCTCGTCTTCAGCTCTGAGTaGGTTTCTGAGGCAGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: CLVYGEGTQDPKHARKALVFSSE*VSEAES Trigger: AGACTCTGCCTCAGAAACCCACTCAGAGCTGAAGAC...GAGGGCTTTCCTAGCATGCTTGGGATCCTGGGTTCCTTCACCATAAACCAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTGCAGCAAATTTCGAGGCTCGTATTCCTCCATGTCCATCAAACACAGCACTCACCCTTCCGCTCTaGCACATAGCCTTTCAGACC | + |
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Preference number: 2 (lower is better) Translates to: FCAANFEARIPPCPSNTALTLPL*HIAFQT Trigger: GGTCTGAAAGGCTATGTGGCAGAGCGGAAGGGTGAG...TGCTGTGTTTGATGGACATGGAGGAATACGAGCCTCGAAATTTGCTGCACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186986.7 ENSMUST00000187049.7 |
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| 3UTR-3UTR CCA 90 bp | TTCTGTGCAGCAAATTTCGAGGCTCGTATTCCTCCATGTCCATCAAACACAGCATCGTTCAGGATGACATaGGCATCCTGCATCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: FCAANFEARIPPCPSNTASFRMT*ASCISS Trigger: GGAGGAGATGCAGGATGCCCATGTCATCCTGAACGA...TGCTGTGTTTGATGGACATGGAGGAATACGAGCCTCGAAATTTGCTGCACAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186986.7 ENSMUST00000187049.7 |
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| 3UTR-3UTR TCA 90 bp | CTTTCCTCATTATATCGACACAGGATTGCCCGACTATCTCCAAGGTTGGCGATAGGAGGATTACACTCCTaGGTGATATCGTTCAGGATG | + |
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Preference number: 2 (lower is better) Translates to: LSSLYRHRIARLSPRLAIGGLHS*VISFRM Trigger: CATCCTGAACGATATCACTCAGGAGTGTAATCCTCC...TATCGCCAACCTTGGAGATAGTCGGGCAATCCTGTGTCGATATAATGAGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR-3UTR GCA 90 bp | AGAAATGCCTTTAGTCTTGAGACTCCTACTGAAGTAGCAGGAGAGGCTCTTACTTCTGTGTGGAGTACATaGAGAGGTCAACTTAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: RNAFSLETPTEVAGEALTSVWST*RGQLRV Trigger: CACCCTAAGTTGACCTCTGCATGTACTCCACACAGA...AGTAAGAGCCTCTCCTGCTACTTCAGTAGGAGTCTCAAGACTAAAGGCATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
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| 3UTR-3UTR GCA 90 bp | TCCACACTGATTATATCTCCTTTAGGAAATTTCCTGATTAAGTTCTGGTGCAAAATGACATGGGCATCCTaGATCTCCTCCCTCTCACCC | + |
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Preference number: 2 (lower is better) Translates to: STLIISPLGNFLIKFWCKMTWAS*ISSLSP Trigger: GGGTGAGAGGGAGGAGATGCAGGATGCCCATGTCAT...TTTGCACCAGAACTTAATCAGGAAATTTCCTAAAGGAGATATAATCAGTGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186986.7 ENSMUST00000187049.7 |
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| 3UTR-3UTR TCA 90 bp | CTCTTTACAGTCTTCTCCACACTGATTATATCTCCTTTAGGAAATTTCCTGATTGGAGGATTACACTCCTaGGTGATATCGTTCAGGATG | + |
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Preference number: 2 (lower is better) Translates to: LFTVFSTLIISPLGNFLIGGLHS*VISFRM Trigger: CATCCTGAACGATATCACTCAGGAGTGTAATCCTCC...AATCAGGAAATTTCCTAAAGGAGATATAATCAGTGTGGAGAAGACTGTAAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186986.7 ENSMUST00000187049.7 |
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| 3UTR-3UTR CCA 90 bp | ATTTATGGCTTTTCCATGACAGACCCTAAGAAGTCATCTATGGTTTGTACAGGAGTCATAAAACAGGTCTaGAAAGGCAGCTATGTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: IYGFSMTDPKKSSMVCTGVIKQV*KGSYVV Trigger: TACTACATAGCTGCCTTTCCAGACCTGTTTTATGAC...TCCTGTACAAACCATAGATGACTTCTTAGGGTCTGTCATGGAAAAGCCATAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR GCA 72 bp | GCCCCGCTGCACTGCCTTGTTGGCCAGCCTGTTGCATaGAGCTTCATAGCGGGCATCAACAGCAGGCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: APLHCLVGQPVA*SFIAGINSRLP Trigger: GGGAAGCCTGCTGTTGATGCCCGCTATGAAGCTGCATGCAACAGGCTGGCCAACAAGGCAGTGCAGCGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| 3UTR GCA 72 bp | CTGAGCCCCGCTGCACTGCCTTGTTGGCCAGCCTGTTaGATGCAGCTTCATAGCGGGCATCAACAGCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LSPAALPCWPAC*MQLHSGHQQQA Trigger: AGCCTGCTGTTGATGCCCGCTATGAAGCTGCATGCAACAGGCTGGCCAACAAGGCAGTGCAGCGGGGCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| 3UTR CCA 72 bp | TCACGTTGTCTGCTGAGCCCCGCTGCACTGCCTTGTTaGCCAGCCTGTTGCATGCAGCTTCATAGCGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SRCLLSPAALPC*PACCMQLHSGH Trigger: ATGCCCGCTATGAAGCTGCATGCAACAGGCTGGCCAACAAGGCAGTGCAGCGGGGCTCAGCAGACAACGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| 3UTR GCA 72 bp | TGCCAGGCTGCCCAGGTCCTAGTCTCCAAGCAGGATTaGTGTCTCTCAGTCCCTGTAGACAGGGTAGCGCTA | + |
|
Preference number: 3 (lower is better) Translates to: CQAAQVLVSKQD*CLSVPVDRVAL Trigger: TAGCGCTACCCTGTCTACAGGGACTGAGAGACAGCAATCCTGCTTGGAGACTAGGACCTGGGCAGCCTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR CCA 72 bp | ACAGGATGTTGTCCACAGCCAGGACACACGTGGCAGTaGACCCGTCTTTCCAGGCAGGCTTCTGGCTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TGCCPQPGHTWQ*TRLSRQASGLK Trigger: CTTCAAGCCAGAAGCCTGCCTGGAAAGACGGGTCCACTGCCACGTGTGTCCTGGCTGTGGACAACATCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR GCA 72 bp | TGGAGACAGGTTAGAAAGTTCTTCGGGGGCCAATCATaGCCAGAGGTTCCCTGCCATGGGCTAGACCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: WRQVRKFFGGQS*PEVPCHGLDHP Trigger: TGGATGGTCTAGCCCATGGCAGGGAACCTCTGGGCATGATTGGCCCCCGAAGAACTTTCTAACCTGTCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTTTATGGTGAAGGAACCCAGGATCCCAAGCATGCTAGGAAAGCCCTCCACTCTGGGGTAAAGACCTaGAAAAGCCCGTCGCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LVYGEGTQDPKHARKALHSGVKT*KSPSQA Trigger: GGCTTGCGACGGGCTTTTCAAGGTCTTTACCCCAGA...GTGGAGGGCTTTCCTAGCATGCTTGGGATCCTGGGTTCCTTCACCATAAACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR CCA 72 bp | TGCCAAGAGTTACCCAGACAGAAGCACTTGGGGACATaGGTCACAGCCTATGGGGCACTGAATGATTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CQELPRQKHLGT*VTAYGALNDSW Trigger: CCAGGAATCATTCAGTGCCCCATAGGCTGTGACCCATGTCCCCAAGTGCTTCTGTCTGGGTAACTCTTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR CCA 72 bp | TTCCCGGGTCTGGATCTTGTCATCCTACCAAAGGGATaGGATCTGAGTGAACAGGGCACCAGCCTCTGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: FPGLDLVILPKG*DLSEQGTSLCH Trigger: ATGACAGAGGCTGGTGCCCTGTTCACTCAGATCCCATCCCTTTGGTAGGATGACAAGATCCAGACCCGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| 3UTR TCA 72 bp | GTCCCACAGGAGTACACACAGCGTGCACAAACAAAATaGACCTGCAAGTCAAGAGCACACGCCAGTGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VPQEYTQRAQTK*TCKSRAHASVL Trigger: CAGCACACTGGCGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCTGTGTGTACTCCTGTGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| 3UTR TCA 72 bp | CTCAGGCCCTCACGAATGGCAAGCACATTCACCAAATaGGCTGACTCCAGCTTGACACCCTCCCTAGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: LRPSRMASTFTK*ADSSLTPSLVC Trigger: ACATACTAGGGAGGGTGTCAAGCTGGAGTCAGCTCATTTGGTGAATGTGCTTGCCATTCGTGAGGGCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR GCA 72 bp | TCTGATGAGTTGGCATTCTCTGTCTGTATGCCAGGCTaGCCAGGTCCTAGTCTCCAAGCAGGATTGCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SDELAFSVCMPG*PGPSLQAGLLS Trigger: AGACAGCAATCCTGCTTGGAGACTAGGACCTGGGCAGCCTGGCATACAGACAGAGAATGCCAACTCATCAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGGAGGAGGAGGACAGTGACTGTCATAAAACAGGTCTGGAAAGGCAGCTATAGGCAGGCTTCTGGCTaGAAGCCTGTTTCAGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: LWRRRTVTVIKQVWKGSYRQASG*KPVSGT Trigger: AGTTCCTGAAACAGGCTTCAAGCCAGAAGCCTGCCT...ATAGCTGCCTTTCCAGACCTGTTTTATGACAGTCACTGTCCTCCTCCTCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR CCA 72 bp | TGGAGGAGGAGGACAGTGACTGTCATAAAACAGGTCTaGAAAGGCAGCTATGTAGTATTACAGCCCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: WRRRTVTVIKQV*KGSYVVLQPLA Trigger: GGCCAGGGGCTGTAATACTACATAGCTGCCTTTCCAGACCTGTTTTATGACAGTCACTGTCCTCCTCCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR TCA 72 bp | TGCGCTCTTCATACTGAGTTGGGTTGTGCTCTTTGCTaGGGCTTAAGGCTGCGTGCTTCTGACTTTCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: CALHTELGCALC*GLRLRASDFPH Trigger: ATGAGGAAAGTCAGAAGCACGCAGCCTTAAGCCTCAGCAAAGAGCACAACCCAACTCAGTATGAAGAGCGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR TCA 72 bp | CCTCCAGCTTTCTGTATCCTCATGCGCTCTTCATACTaGGTTGGGTTGTGCTCTTTGCTGAGGCTTAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PPAFCILMRSSY*VGLCSLLRLKA Trigger: AGCCTTAAGCCTCAGCAAAGAGCACAACCCAACTCAGTATGAAGAGCGCATGAGGATACAGAAAGCTGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR TCA 72 bp | CCTCTCAGGGCTCACTTCAGGGAAACAGGAACGAGATaGATGAAGTTGTCTAGGAACCTCAAGGCAGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: PLRAHFRETGTR*MKLSRNLKAGQ Trigger: TTGTCCTGCCTTGAGGTTCCTAGACAACTTCATTCATCTCGTTCCTGTTTCCCTGAAGTGAGCCCTGAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR CCA 72 bp | TATATCGACACAGGATTGCCCGACTATCTCCAAGGTTaGCGATATACAGGATGTTGTCCACAGCCAGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: YIDTGLPDYLQG*RYTGCCPQPGH Trigger: GTGTCCTGGCTGTGGACAACATCCTGTATATCGCCAACCTTGGAGATAGTCGGGCAATCCTGTGTCGATATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR CCA 72 bp | TTAGGGTGTTCCTCAGGAGCCAAGCACTTTGTTTTGTaGGGACTGGATCTCACTAGGTCCCAGATTCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LGCSSGAKHFVL*GLDLTRSQIQG Trigger: ACCTTGAATCTGGGACCTAGTGAGATCCAGTCCCCACAAAACAAAGTGCTTGGCTCCTGAGGAACACCCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR CCA 72 bp | CAGATGACAGCCACAGCAGTTGGTTCTCTTACTTTGTaGGTCCTGGAGACTGAATCTGGGTACTTAGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QMTATAVGSLTL*VLETESGYLGL Trigger: CAAGCCTAAGTACCCAGATTCAGTCTCCAGGACCCACAAAGTAAGAGAACCAACTGCTGTGGCTGTCATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR TCA 72 bp | ACCCGAGTAATGAGAGATGATGGAGGATTACACTCCTaGGTGATATCGTTCAGGATGACATGGGCATCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TRVMRDDGGLHS*VISFRMTWASC Trigger: GCAGGATGCCCATGTCATCCTGAACGATATCACTCAGGAGTGTAATCCTCCATCATCTCTCATTACTCGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186986.7 ENSMUST00000187049.7 |
||
| 3UTR TCA 72 bp | GGGTACTTAGGCTTGGCAGGAAGTGTCTTTAGCAGCTaGACAAGCTCACTGGGCCCACAGTGTTATTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GYLGLAGSVFSS*TSSLGPQCYFE Trigger: TTCAAAATAACACTGTGGGCCCAGTGAGCTTGTTCAGCTGCTAAAGACACTTCCTGCCAAGCCTAAGTACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR TCA 72 bp | AGCAGTTGGTTCTCTTACTTTGTGGGTCCTGGAGACTaGATCTGGGTACTTAGGCTTGGCAGGAAGTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SSWFSYFVGPGD*IWVLRLGRKCL Trigger: AAGACACTTCCTGCCAAGCCTAAGTACCCAGATTCAGTCTCCAGGACCCACAAAGTAAGAGAACCAACTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR TCA 72 bp | GTCTGGATCTTGTCATCCTACCAAAGGGATGGGATCTaGGTGAACAGGGCACCAGCCTCTGTCATTCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: VWILSSYQRDGI*VNRAPASVILL Trigger: TAAAAGAATGACAGAGGCTGGTGCCCTGTTCACTCAGATCCCATCCCTTTGGTAGGATGACAAGATCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTATGTGGATGATGGAAATTAAACTCAGGCCCTCACGAATGGCAAGCACATTCGCGATATACAGGATGTaGTCCACAGCCAGGACACAC | + |
|
Preference number: 3 (lower is better) Translates to: LMWMMEIKLRPSRMASTFAIYRM*STARTH Trigger: GTGTGTCCTGGCTGTGGACAACATCCTGTATATCGC...GAATGTGCTTGCCATTCGTGAGGGCCTGAGTTTAATTTCCATCATCCACATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR TCA 72 bp | CTTGGGGACATGGGTCACAGCCTATGGGGCACTGAATaGTTCCTGGGCTGCTATGAAATTGCTAAATTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LGDMGHSLWGTE*FLGCYEIAKLN Trigger: GTTTAATTTAGCAATTTCATAGCAGCCCAGGAATCATTCAGTGCCCCATAGGCTGTGACCCATGTCCCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR GCA 72 bp | TACAACCATGGAAGTCCCACAGGAGTACACACAGCGTaGACAAACAAAATGAACCTGCAAGTCAAGAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: YNHGSPTGVHTA*TNKMNLQVKST Trigger: TGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| 3UTR-3UTR CAA 90 bp | AGAAATGCCTTTAGTCTTGAGACTCCTACTGAAGTAGCAGGAGAGGCTCTTACTCGACTATCTCCAAGGTaGGCGATATACAGGATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: RNAFSLETPTEVAGEALTRLSPR*AIYRML Trigger: CAACATCCTGTATATCGCCAACCTTGGAGATAGTCG...AGTAAGAGCCTCTCCTGCTACTTCAGTAGGAGTCTCAAGACTAAAGGCATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR GCA 72 bp | TGGCTTGAAGCCTGTTTCAGGAACTCTTCATCGGTGTaGTTAAAAGTATCTAGCAGACACCTCTTTACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: WLEACFRNSSSV*LKVSSRHLFTV Trigger: GACTGTAAAGAGGTGTCTGCTAGATACTTTTAAGCACACCGATGAAGAGTTCCTGAAACAGGCTTCAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR CCA 72 bp | TGGCAGGAAGTGTCTTTAGCAGCTGAACAAGCTCACTaGGCCCACAGTGTTATTTTGAAAGGTTTTTATTCC | + |
|
Preference number: 3 (lower is better) Translates to: WQEVSLAAEQAH*AHSVILKGFYS Trigger: GGAATAAAAACCTTTCAAAATAACACTGTGGGCCCAGTGAGCTTGTTCAGCTGCTAAAGACACTTCCTGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR GCA 72 bp | ATTTTGAAAGGTTTTTATTCCTCTGTGTGGAGTACATaGAGAGGTCAACTTAGGGTGTTCCTCAGGAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: ILKGFYSSVWST*RGQLRVFLRSQ Trigger: TTGGCTCCTGAGGAACACCCTAAGTTGACCTCTGCATGTACTCCACACAGAGGAATAAAAACCTTTCAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| CDS-3UTR GCA 90 bp | CGCGATACCTCCAGCACGCCCAAGACACGCCCATCTCTGACATTCCCTCCAGCTCCTGGGAACCTGAATTaGCACTGGCAGCAGGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RDTSSTPKTRPSLTFPPAPGNLN*HWQQAE Trigger: TTCCGCCTGCTGCCAGTGGCAATTCAGGTTCCCAGG...AGCTGGAGGGAATGTCAGAGATGGGCGTGTCTTGGGCGTGCTGGAGGTATCGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| CDS-3UTR GCA 90 bp | ACGTTGTCTGCTGAGCCCCGCTGCACTGCCTTGTTGGCCAGCCTGTTGCATGCACCACAGCGCTTGTACTaGCCATCTCCAATGGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: TLSAEPRCTALLASLLHAPQRLY*PSPMER Trigger: GCGTTCCATTGGAGATGGGCAGTACAAGCGCTGTGG...TGCATGCAACAGGCTGGCCAACAAGGCAGTGCAGCGGGGCTCAGCAGACAACGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| CDS-3UTR CCA 90 bp | ACGTTGTCTGCTGAGCCCCGCTGCACTGCCTTGTTGGCCAGCCTGTTGCATGCATCATTGGGGGTCAGCTaGCAGCGTCTGATATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLSAEPRCTALLASLLHASLGVS*QRLISG Trigger: GCCTGATATCAGACGCTGCCAGCTGACCCCCAATGA...TGCATGCAACAGGCTGGCCAACAAGGCAGTGCAGCGGGGCTCAGCAGACAACGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| CDS-3UTR TCA 90 bp | TCACGTTGTCTGCTGAGCCCCGCTGCACTGCCTTGTTGGCCAGCCTGTTGCATGAGACACGCCCATCTCTaGCATTCCCTCCAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRCLLSPAALPCWPACCMRHAHL*HSLQLS Trigger: AGAAAGCTGGAGGGAATGTCAGAGATGGGCGTGTCT...CATGCAACAGGCTGGCCAACAAGGCAGTGCAGCGGGGCTCAGCAGACAACGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| 3UTR CAA 72 bp | GCCCGACTATCTCCAAGGTTGGCGATATACAGGATGTaGTCCACAGCCAGGACACACGTGGCAGTGGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: ARLSPRLAIYRM*STARTHVAVDP Trigger: CGGGTCCACTGCCACGTGTGTCCTGGCTGTGGACAACATCCTGTATATCGCCAACCTTGGAGATAGTCGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR CAA 72 bp | ATGCCAGGCTGCCCAGGTCCTAGTCTCCAAGCAGGATaGCTGTCTCTCAGTCCCTGTAGACAGGGTAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: MPGCPGPSLQAG*LSLSPCRQGSA Trigger: AGCGCTACCCTGTCTACAGGGACTGAGAGACAGCAATCCTGCTTGGAGACTAGGACCTGGGCAGCCTGGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| CDS-3UTR TCA 90 bp | CACTGCCTTGTTGGCCAGCCTGTTGCATGCAGCTTCATAGCGGGCATCAACAGCGGTTGTGCTCTTTGCTaGGGCTTAAGGCTGCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HCLVGQPVACSFIAGINSGCALC*GLRLRA Trigger: AGCACGCAGCCTTAAGCCTCAGCAAAGAGCACAACC...GCTGTTGATGCCCGCTATGAAGCTGCATGCAACAGGCTGGCCAACAAGGCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| CDS-3UTR GCA 90 bp | CACAGCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACACGCCAGTGTGCAGCCTGAGTCAGTACTaGTGGCCGGGGGCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSVHKQNEPASQEHTPVCSLSQY*WPGAGP Trigger: AGGACCTGCCCCCGGCCAGCAGTACTGACTCAGGCT...GCACACTGGCGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR GCA 90 bp | CTCCAGCACGCCCAAGACACGCCCATCTCTGACATTCCCTCCAGCTTTCTGTATATACTGAGTCAGTACTaGTGGCCGGGGGCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQHAQDTPISDIPSSFLYILSQY*WPGAGP Trigger: AGGACCTGCCCCCGGCCAGCAGTACTGACTCAGTAT...ATACAGAAAGCTGGAGGGAATGTCAGAGATGGGCGTGTCTTGGGCGTGCTGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187678.7 |
||
| CDS-3UTR CCA 90 bp | AGCCAGCAAAATGAACCTGTCATTGGGGGTCAGCTGGCAGCGTCTGATATCAGGCTGAGTCAGTACTGCTaGCCGGGGGCAGGTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SQQNEPVIGGQLAASDIRLSQYC*PGAGPQ Trigger: TTGAGGACCTGCCCCCGGCCAGCAGTACTGACTCAG...CCTGATATCAGACGCTGCCAGCTGACCCCCAATGACAGGTTCATTTTGCTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000187049.7 ENSMUST00000187678.7 |
||
| CDS-3UTR CCA 90 bp | GCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACACGCCAGTGTGCTGGCGGACACACGTGGCAGTaGACCCGTCTTTCCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ACTNKMNLQVKSTRQCAGGHTWQ*TRLSRQ Trigger: CTGCCTGGAAAGACGGGTCCACTGCCACGTGTGTCC...GCCAGCACACTGGCGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| 3UTR CAA 72 bp | CCATCCACTCAGGCAGCGAACCAAGCACTCCTGAGATaGACAGCTGGGTGTAAGCCAGGACGACAGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PSTQAANQALLR*TAGCKPGRQSS Trigger: GGATGACTGTCGTCCTGGCTTACACCCAGCTGTCAATCTCAGGAGTGCTTGGTTCGCTGCCTGAGTGGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| CDS-3UTR TCA 90 bp | AGGAGTACACACAGCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACACGAGGTCCCCCAGAGCCTaGGTCAGTACTGCTGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RSTHSVHKQNEPASQEHTRSPRA*VSTAGR Trigger: CCGGCCAGCAGTACTGACTCAGGCTCTGGGGGACCT...CGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCTGTGTGTACTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR TCA 90 bp | AGCTTCATAGCGGGCATCAACAGCAGGCTTCCCTTCCCGGGTCTGGATCTTGTCTATCAGGCACAGATGTaGCCCCACAGCGCTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SFIAGINSRLPFPGLDLVYQAQM*PHSACT Trigger: AGTACAAGCGCTGTGGGGTCACATCTGTGCCTGATA...GACAAGATCCAGACCCGGGAAGGGAAGCCTGCTGTTGATGCCCGCTATGAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTGGTTTATGGTGAAGGAACCCAGGATCCCAAGCATGCTAGGAAAGCCCTCCACCACCTGGGAACCTaGATTGCCACTGGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLVYGEGTQDPKHARKALHHLGT*IATGSR Trigger: CCTGCTGCCAGTGGCAATTCAGGTTCCCAGGTGGTG...GAGGGCTTTCCTAGCATGCTTGGGATCCTGGGTTCCTTCACCATAAACCAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR CAA 72 bp | AGGCCACAGTGCCAAGAGTTACCCAGACAGAAGCACTaGGGGACATGGGTCACAGCCTATGGGGCACTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RPQCQELPRQKH*GTWVTAYGALN Trigger: ATTCAGTGCCCCATAGGCTGTGACCCATGTCCCCAAGTGCTTCTGTCTGGGTAACTCTTGGCACTGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| CDS-3UTR TCA 90 bp | TTCTGTGCAGCAAATTTCGAGGCTCGTATTCCTCCATGTCCATCAAACACAGCAAGGTCCCCCAGAGCCTaGGTCAGTACTGCTGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FCAANFEARIPPCPSNTARSPRA*VSTAGR Trigger: CCGGCCAGCAGTACTGACTCAGGCTCTGGGGGACCT...TGCTGTGTTTGATGGACATGGAGGAATACGAGCCTCGAAATTTGCTGCACAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186986.7 ENSMUST00000187049.7 |
||
| CDS-3UTR GCA 90 bp | GCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACACGCCAGTGTGCTGGCCTCACCCTTCCGCTCTaGCACATAGCCTTTCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: ACTNKMNLQVKSTRQCAGLTLPL*HIAFQT Trigger: GGTCTGAAAGGCTATGTGGCAGAGCGGAAGGGTGAG...GCCAGCACACTGGCGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR CCA 90 bp | GGAGTACACACAGCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACACGCCTGAGTCAGTACTGCTaGCCGGGGGCAGGTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GVHTACTNKMNLQVKSTRLSQYC*PGAGPQ Trigger: TTGAGGACCTGCCCCCGGCCAGCAGTACTGACTCAG...GCGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCTGTGTGTACTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR CCA 90 bp | GGAGTACACACAGCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACACGCCAGCCAGGACACACGTaGCAGTGGACCCGTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVHTACTNKMNLQVKSTRQPGHT*QWTRLS Trigger: GGAAAGACGGGTCCACTGCCACGTGTGTCCTGGCTG...GCGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCTGTGTGTACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR CCA 90 bp | CCAAAGGGATGGGATCTGAGTGAACAGGGCACCAGCCTCTGTCATTCTTTTAAGCAGCCAGGACACACGTaGCAGTGGACCCGTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKGWDLSEQGTSLCHSFKQPGHT*QWTRLS Trigger: GGAAAGACGGGTCCACTGCCACGTGTGTCCTGGCTG...CTTAAAAGAATGACAGAGGCTGGTGCCCTGTTCACTCAGATCCCATCCCTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGAGCCCCGCTGCACTGCCTTGTTGGCCAGCCTGTTGCATGCAGCTTCACTCTTCATACTGAGTTaGGTTGTGCTCTTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SAEPRCTALLASLLHAASLFILS*VVLFAE Trigger: CTCAGCAAAGAGCACAACCCAACTCAGTATGAAGAG...TGAAGCTGCATGCAACAGGCTGGCCAACAAGGCAGTGCAGCGGGGCTCAGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTGGCAGCGTCTGATATCAGGCACAGATGTGACCCCACAGCGCTTGTACTGTCAGTCTTCACCACCTaGGAACCTGAATTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QLAASDIRHRCDPTALVLSVFTT*EPELPL Trigger: CAGTGGCAATTCAGGTTCCCAGGTGGTGAAGACTGA...CAGTACAAGCGCTGTGGGGTCACATCTGTGCCTGATATCAGACGCTGCCAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| CDS-3UTR TCA 90 bp | CAGCTTCATAGCGGGCATCAACAGCAGGCTTCCCTTCCCGGGTCTGGATCTTGTATGCGCTCTTCATACTaGGTTGGGTTGTGCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QLHSGHQQQASLPGSGSCMRSSY*VGLCSL Trigger: CAAAGAGCACAACCCAACTCAGTATGAAGAGCGCAT...ACAAGATCCAGACCCGGGAAGGGAAGCCTGCTGTTGATGCCCGCTATGAAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| CDS-3UTR GCA 90 bp | ATTCTGTGCAGCAAATTTCGAGGCTCGTATTCCTCCATGTCCATCAAACACAGCAGCCTGAGTCAGTACTaGTGGCCGGGGGCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILCSKFRGSYSSMSIKHSSLSQY*WPGAGP Trigger: AGGACCTGCCCCCGGCCAGCAGTACTGACTCAGGCT...GCTGTGTTTGATGGACATGGAGGAATACGAGCCTCGAAATTTGCTGCACAGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186986.7 ENSMUST00000187049.7 |
||
| CDS-3UTR GCA 90 bp | GCTTGTACTGCCCATCTCCAATGGAACGCGATACCTCCAGCACGCCCAAGACACAGGGGCTTTCCTCTTTaGTCCTTTCCCTTCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ACTAHLQWNAIPPARPRHRGFPL*SFPFSL Trigger: AAGACTGAAGGGAAAGGAGCAAAGAGGAAAGCCCCT...GTGTCTTGGGCGTGCTGGAGGTATCGCGTTCCATTGGAGATGGGCAGTACAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| CDS-3UTR GCA 90 bp | AGCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACACGCCAGTGTGCTGGATGACATGGGCATCCTaGATCTCCTCCCTCTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: SVHKQNEPASQEHTPVCWMTWAS*ISSLSP Trigger: GGGTGAGAGGGAGGAGATGCAGGATGCCCATGTCAT...CCAGCACACTGGCGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR GCA 90 bp | ACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCACAAACTCTGCTGAGCCCCGCTaGACTGCCTTGTTGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TFIYNHGSPTGVHTACTNSAEPR*TALLAS Trigger: GCTGGCCAACAAGGCAGTGCAGCGGGGCTCAGCAGA...GTTTGTGCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR CCA 90 bp | TGGAGGATTACACTCCTGAGTGATATCGTTCAGGATGACATGGGCATCCTGCATCTGAGTCAGTACTGCTaGCCGGGGGCAGGTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WRITLLSDIVQDDMGILHLSQYC*PGAGPQ Trigger: TTGAGGACCTGCCCCCGGCCAGCAGTACTGACTCAG...ATGCAGGATGCCCATGTCATCCTGAACGATATCACTCAGGAGTGTAATCCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186986.7 ENSMUST00000187049.7 |
||
| CDS-3UTR CCA 90 bp | GATCTGAGTGAACAGGGCACCAGCCTCTGTCATTCTTTTAAGACACTACACCAGGGACACACGTGGCAGTaGACCCGTCTTTCCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLSEQGTSLCHSFKTLHQGHTWQ*TRLSRQ Trigger: CTGCCTGGAAAGACGGGTCCACTGCCACGTGTGTCC...CTGGTGTAGTGTCTTAAAAGAATGACAGAGGCTGGTGCCCTGTTCACTCAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
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| CDS-3UTR TCA 90 bp | CACAGCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACACGCCAGTGTGCCGCAAGCCAGCAAAATaGACCTGTCATTGGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSVHKQNEPASQEHTPVCRKPAK*TCHWGS Trigger: TGACCCCCAATGACAGGTTCATTTTGCTGGCTTGCG...GCACACTGGCGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR GCA 90 bp | GCGGGCATCAACAGCAGGCTTCCCTTCCCGGGTCTGGATCTTGTCATCCTACCACTTTCTGTATCCTCATaGGCTCTTCATACTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGINSRLPFPGLDLVILPLSVSS*ALHTEL Trigger: CAACTCAGTATGAAGAGCGCATGAGGATACAGAAAG...TGGTAGGATGACAAGATCCAGACCCGGGAAGGGAAGCCTGCTGTTGATGCCCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| CDS-3UTR CCA 90 bp | ATTCTGTGCAGCAAATTTCGAGGCTCGTATTCCTCCATGTCCATCAAACACAGCCTGAGTCAGTACTGCTaGCCGGGGGCAGGTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ILCSKFRGSYSSMSIKHSLSQYC*PGAGPQ Trigger: TTGAGGACCTGCCCCCGGCCAGCAGTACTGACTCAG...GCTGTGTTTGATGGACATGGAGGAATACGAGCCTCGAAATTTGCTGCACAGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186986.7 ENSMUST00000187049.7 |
||
| CDS-3UTR CCA 90 bp | GGAGTACACACAGCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACACGCTCATTGGGGGTCAGCTaGCAGCGTCTGATATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVHTACTNKMNLQVKSTRSLGVS*QRLISG Trigger: GCCTGATATCAGACGCTGCCAGCTGACCCCCAATGA...GCGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCTGTGTGTACTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR TCA 90 bp | TGGAGGATTACACTCCTGAGTGATATCGTTCAGGATGACATGGGCATCCTGCATTGTGGCAAGAGAACCTaGATTGCCACTGGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WRITLLSDIVQDDMGILHCGKRT*IATGSR Trigger: CCTGCTGCCAGTGGCAATTCAGGTTCTCTTGCCACA...ATGCAGGATGCCCATGTCATCCTGAACGATATCACTCAGGAGTGTAATCCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186986.7 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCGTCACGTTGTCTGCTaGGCCCCGCTGCACTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRNLYLQPWKSHRSTHSVRHVVC*APLHCL Trigger: AAGGCAGTGCAGCGGGGCTCAGCAGACAACGTGACG...CACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGTTTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR CCA 90 bp | CACAGCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACACGCCAGTGTGCTCAGTCTTCACCACCTaGGAACCTGATGTGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSVHKQNEPASQEHTPVCSVFTT*EPDVAR Trigger: TCTTGCCACATCAGGTTCCCAGGTGGTGAAGACTGA...GCACACTGGCGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR TCA 90 bp | GATCTGAGTGAACAGGGCACCAGCCTCTGTCATTCTTTTAAGACACTACACCAGCGCAAGCCAGCAAAATaGACCTGTCATTGGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLSEQGTSLCHSFKTLHQRKPAK*TCHWGS Trigger: TGACCCCCAATGACAGGTTCATTTTGCTGGCTTGCG...CTGGTGTAGTGTCTTAAAAGAATGACAGAGGCTGGTGCCCTGTTCACTCAGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| CDS-3UTR GCA 90 bp | TCAAACACAGCAAAGTATGAAACCCGAGTAATGAGAGATGATGGAGGATTACACAGCCTGAGTCAGTACTaGTGGCCGGGGGCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SNTAKYETRVMRDDGGLHSLSQY*WPGAGP Trigger: AGGACCTGCCCCCGGCCAGCAGTACTGACTCAGGCT...GTGTAATCCTCCATCATCTCTCATTACTCGGGTTTCATACTTTGCTGTGTTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186986.7 ENSMUST00000187049.7 |
||
| CDS-3UTR GCA 90 bp | ATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCACAAACAAAATGGGCCAGCCTGTTGCATaGAGCTTCATAGCGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: IYNHGSPTGVHTACTNKMGQPVA*SFIAGI Trigger: GATGCCCGCTATGAAGCTGCATGCAACAGGCTGGCC...CATTTTGTTTGTGCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR CCA 90 bp | CTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCACAAACAAGCTGCACTGCCTTGTTaGCCAGCCTGTTGCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LYLQPWKSHRSTHSVHKQAALPC*PACCMQ Trigger: CTGCATGCAACAGGCTGGCCAACAAGGCAGTGCAGC...TTGTTTGTGCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| 3UTR CAA 72 bp | GATCAGATGACAGCCACAGCAGTTGGTTCTCTTACTTaGTGGGTCCTGGAGACTGAATCTGGGTACTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DQMTATAVGSLT*WVLETESGYLG Trigger: GCCTAAGTACCCAGATTCAGTCTCCAGGACCCACAAAGTAAGAGAACCAACTGCTGTGGCTGTCATCTGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| CDS-3UTR TCA 90 bp | AAAGAAACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCGGCAGGCTTCTGGCTTaGAGCCTGTTTCAGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: KETFIYNHGSPTGVHTACGRLLA*SLFQEL Trigger: GAGTTCCTGAAACAGGCTTCAAGCCAGAAGCCTGCC...GCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGTTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR TCA 90 bp | AGAAACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCACAGACACGCCCATCTCTaGCATTCCCTCCAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RNLYLQPWKSHRSTHSVHRHAHL*HSLQLS Trigger: AGAAAGCTGGAGGGAATGTCAGAGATGGGCGTGTCT...GTGCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR TCA 90 bp | ACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCACAAACTATCAGGCACAGATGTaGCCCCACAGCGCTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: TFIYNHGSPTGVHTACTNYQAQM*PHSACT Trigger: AGTACAAGCGCTGTGGGGTCACATCTGTGCCTGATA...GTTTGTGCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR TCA 90 bp | GGAGTACACACAGCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACACGCCAAGGCAGGACAAGATaGAGTTCACAGCTTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVHTACTNKMNLQVKSTRQGRTR*SSQLLL Trigger: CAGAAGAAGCTGTGAACTTCATCTTGTCCTGCCTTG...GCGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCTGTGTGTACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR GCA 90 bp | ATTCTGTGCAGCAAATTTCGAGGCTCGTATTCCTCCATGTCCATCAAACACAGCCAAGAGAACCTGAATTaGCACTGGCAGCAGGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILCSKFRGSYSSMSIKHSQENLN*HWQQAE Trigger: TTCCGCCTGCTGCCAGTGGCAATTCAGGTTCTCTTG...GCTGTGTTTGATGGACATGGAGGAATACGAGCCTCGAAATTTGCTGCACAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186986.7 |
||
| CDS-3UTR GCA 90 bp | ATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCACAAACAAAATGCCACAGCGCTTGTACTaGCCATCTCCAATGGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: IYNHGSPTGVHTACTNKMPQRLY*PSPMER Trigger: GCGTTCCATTGGAGATGGGCAGTACAAGCGCTGTGG...CATTTTGTTTGTGCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| 3UTR CAA 72 bp | TTATATCGACACAGGATTGCCCGACTATCTCCAAGGTaGGCGATATACAGGATGTTGTCCACAGCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LYRHRIARLSPR*AIYRMLSTART Trigger: TGTCCTGGCTGTGGACAACATCCTGTATATCGCCAACCTTGGAGATAGTCGGGCAATCCTGTGTCGATATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| 3UTR CAA 72 bp | CCTTCCAATTCTGATCTTCCTGCCTCTAATCAGGTGTaGGGGCTATCTATAGGCATGTACTGCCATGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSNSDLPASNQV*GLSIGMYCHVW Trigger: CCAGACATGGCAGTACATGCCTATAGATAGCCCCAACACCTGATTAGAGGCAGGAAGATCAGAATTGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| CDS-3UTR TCA 90 bp | CTCTTTACAGTCTTCTCCACACTGATTATATCTCCTTTAGGAAATTTCCTGATTAGGTCCCCCAGAGCCTaGGTCAGTACTGCTGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LFTVFSTLIISPLGNFLIRSPRA*VSTAGR Trigger: CCGGCCAGCAGTACTGACTCAGGCTCTGGGGGACCT...AATCAGGAAATTTCCTAAAGGAGATATAATCAGTGTGGAGAAGACTGTAAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186986.7 ENSMUST00000187049.7 |
||
| CDS-3UTR TCA 90 bp | TATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCACAAACAAAATTGTGGCAAGAGAACCTaGATTGCCACTGGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YLQPWKSHRSTHSVHKQNCGKRT*IATGSR Trigger: CCTGCTGCCAGTGGCAATTCAGGTTCTCTTGCCACA...ATTTTGTTTGTGCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGGGTTGTGCTCTTTGCTaGGGCTTAAGGCTGCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KRNLYLQPWKSHRSTHSVGCALC*GLRLRA Trigger: AGCACGCAGCCTTAAGCCTCAGCAAAGAGCACAACC...CACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGTTTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR TCA 90 bp | TGGGATCTGAGTGAACAGGGCACCAGCCTCTGTCATTCTTTTAAGACACTACACCAAGGCAGGACAAGATaGAGTTCACAGCTTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WDLSEQGTSLCHSFKTLHQGRTR*SSQLLL Trigger: CAGAAGAAGCTGTGAACTTCATCTTGTCCTGCCTTG...GTGTAGTGTCTTAAAAGAATGACAGAGGCTGGTGCCCTGTTCACTCAGATCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCACAAACCCTGGGAACCTGATGTaGCAAGAGAACCTGAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TFIYNHGSPTGVHTACTNPGNLM*QENLNC Trigger: GCAATTCAGGTTCTCTTGCCACATCAGGTTCCCAGG...GTTTGTGCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGCAGCAAATTTCGAGGCTCGTATTCCTCCATGTCCATCAAACACAGCATCAGTCTTCACCACCTaGGAACCTGATGTGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FCAANFEARIPPCPSNTASVFTT*EPDVAR Trigger: TCTTGCCACATCAGGTTCCCAGGTGGTGAAGACTGA...TGCTGTGTTTGATGGACATGGAGGAATACGAGCCTCGAAATTTGCTGCACAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186986.7 |
||
| CDS-3UTR CCA 90 bp | GCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACACGCCAGTGTGCTGGCTTCCTGATTAAGTTCTaGTGCAAATTCTGTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ACTNKMNLQVKSTRQCAGFLIKF*CKFCAA Trigger: TGCTGCACAGAATTTGCACCAGAACTTAATCAGGAA...GCCAGCACACTGGCGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR CCA 90 bp | ATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCACAAACAAAATGTTCCAGGCAGGCTTCTaGCTTGAAGCCTGTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IYNHGSPTGVHTACTNKMFQAGF*LEACFR Trigger: CCTGAAACAGGCTTCAAGCCAGAAGCCTGCCTGGAA...CATTTTGTTTGTGCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR CCA 90 bp | ATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCACAAACAAAATGTTCCCTTCCCGGGTCTaGATCTTGTCATCCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IYNHGSPTGVHTACTNKMFPSRV*ILSSSR Trigger: CCTTGAGGATGACAAGATCCAGACCCGGGAAGGGAA...CATTTTGTTTGTGCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR TCA 90 bp | AGAAACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCACGGAGGATTACACTCCTaGGTGATATCGTTCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RNLYLQPWKSHRSTHSVHGGLHS*VISFRM Trigger: CATCCTGAACGATATCACTCAGGAGTGTAATCCTCC...GTGCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR GCA 90 bp | GAAACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCACAAGGGGCTTTCCTCTTTaGTCCTTTCCCTTCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ETFIYNHGSPTGVHTACTRGFPL*SFPFSL Trigger: AAGACTGAAGGGAAAGGAGCAAAGAGGAAAGCCCCT...TGTGCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR GCA 90 bp | TTCTGTGCAGCAAATTTCGAGGCTCGTATTCCTCCATGTCCATCAAACACAGCAAGGGGCTTTCCTCTTTaGTCCTTTCCCTTCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FCAANFEARIPPCPSNTARGFPL*SFPFSL Trigger: AAGACTGAAGGGAAAGGAGCAAAGAGGAAAGCCCCT...TGCTGTGTTTGATGGACATGGAGGAATACGAGCCTCGAAATTTGCTGCACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186986.7 ENSMUST00000187049.7 |
||
| CDS-3UTR GCA 90 bp | AAAAAGAAACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTTGTTGGCCAGCCTGTTaGATGCAGCTTCATAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KKKPLFTTMEVPQEYTQRCWPAC*MQLHSG Trigger: CCCGCTATGAAGCTGCATGCAACAGGCTGGCCAACA...ACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGTTTCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGTCGTTCAGGATGACATaGGCATCCTGCATCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRNLYLQPWKSHRSTHSVSFRMT*ASCISS Trigger: GGAGGAGATGCAGGATGCCCATGTCATCCTGAACGA...CACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGTTTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR CCA 90 bp | CACAGGAGTACACACAGCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACCTCTTCATACTGAGTTaGGTTGTGCTCTTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HRSTHSVHKQNEPASQEHLFILS*VVLFAE Trigger: CTCAGCAAAGAGCACAACCCAACTCAGTATGAAGAG...GTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCTGTGTGTACTCCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR TCA 90 bp | AAGAAACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCAATGCGCTCTTCATACTaGGTTGGGTTGTGCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KKPLFTTMEVPQEYTQRAMRSSY*VGLCSL Trigger: CAAAGAGCACAACCCAACTCAGTATGAAGAGCGCAT...TGCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGTTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR GCA 90 bp | AAAAAGAAACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTCAAGAGAACCTGAATTaGCACTGGCAGCAGGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KKKPLFTTMEVPQEYTQRQENLN*HWQQAE Trigger: TTCCGCCTGCTGCCAGTGGCAATTCAGGTTCTCTTG...ACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGTTTCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR GCA 90 bp | GGAGTACACACAGCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACACGCCTGATTAAGTTCTGGTaGAAATTCTGTGCAGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GVHTACTNKMNLQVKSTRLIKFW*KFCAAN Trigger: ATTTGCTGCACAGAATTTGCACCAGAACTTAATCAG...GCGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCTGTGTGTACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR GCA 90 bp | AAAAAGAAACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTCTGGTGCAAATTCTGTaGAGCAAATTTCGAGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KKKPLFTTMEVPQEYTQRLVQIL*SKFRGS Trigger: CGAGCCTCGAAATTTGCTGCACAGAATTTGCACCAG...ACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGTTTCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCTTTCTGTATCCTCATaGGCTCTTCATACTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRNLYLQPWKSHRSTHSVLSVSS*ALHTEL Trigger: CAACTCAGTATGAAGAGCGCATGAGGATACAGAAAG...CACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGTTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS CCA 90 bp | GTCCTCAAAGAGCACGGGTCGTCCCTGTGCTTCCTTCCCGGCAGATaGCCGCGGCGCGCGCTCGGGCTCCGGCAGGTCCCCGAAGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VLKEHGSSLCFLPGR*PRRALGLRQVPEEV Trigger: GACCTCTTCGGGGACCTGCCGGAGCCCGAGCGCGCGCCGCGGCCATCTGCCGGGAAGGAAGCACAGGGACGACCCGTGCTCTTTGAGGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000027534.13 ENSMUST00000186986.7 ENSMUST00000187306.7 ENSMUST00000187678.7 ENSMUST00000190519.2 |
||
| CDS CCA 90 bp | GTCCTCAAAGAGCACGGGTCGTCCCTGTGCTTCCTTCCCGGCAGATaGCCGCGGCGCGCGCTCGGGCTCCGGCAGGTCCCCGAAGAGGNN | + |
|
Preference number: 5 (lower is better) Translates to: VLKEHGSSLCFLPGR*PRRALGLRQVPEEX Trigger: NNCCTCTTCGGGGACCTGCCGGAGCCCGAGCGCGCGCCGCGGCCATCTGCCGGGAAGGAAGCACAGGGACGACCCGTGCTCTTTGAGGAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| CDS-3UTR CAA 90 bp | GCGGGCATCAACAGCAGGCTTCCCTTCCCGGGTCTGGATCTTGTCATCCTACCAGTTGGGTTGTGCTCTTaGCTGAGGCTTAAGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: AGINSRLPFPGLDLVILPVGLCS*LRLKAA Trigger: CGCAGCCTTAAGCCTCAGCAAAGAGCACAACCCAAC...TGGTAGGATGACAAGATCCAGACCCGGGAAGGGAAGCCTGCTGTTGATGCCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGCTTCCCTTCCCGGGTCTGGATCTTGTCATCCTACCAAAGGGATGGGATCCTCCTGACACAGGGGTaGCGGGGCAATGGAAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: AGFPSRVWILSSYQRDGILLTQG*RGNGNK Trigger: TTTGTTTCCATTGCCCCGCAACCCCTGTGTCAGGAG...GATCCCATCCCTTTGGTAGGATGACAAGATCCAGACCCGGGAAGGGAAGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGCTTCCCTTCCCGGGTCTGGATCTTGTCATCCTACCAAAGGGATGGGATCGCGATATACAGGATGTaGTCCACAGCCAGGACACAC | + |
|
Preference number: 5 (lower is better) Translates to: AGFPSRVWILSSYQRDGIAIYRM*STARTH Trigger: GTGTGTCCTGGCTGTGGACAACATCCTGTATATCGC...GATCCCATCCCTTTGGTAGGATGACAAGATCCAGACCCGGGAAGGGAAGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| CDS-3UTR CAA 90 bp | CACTGCCTTGTTGGCCAGCCTGTTGCATGCAGCTTCATAGCGGGCATCAACAGCAAAATGAACCTGTCATaGGGGGTCAGCTGGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: HCLVGQPVACSFIAGINSKMNLS*GVSWQR Trigger: ACGCTGCCAGCTGACCCCCAATGACAGGTTCATTTT...GCTGTTGATGCCCGCTATGAAGCTGCATGCAACAGGCTGGCCAACAAGGCAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| CDS-3UTR CAA 90 bp | CACAGCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACACGCCAGTGTGCGCAAGAGAACCTGAATaGCCACTGGCAGCAGGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: HSVHKQNEPASQEHTPVCAREPE*PLAAGG Trigger: TCCGCCTGCTGCCAGTGGCAATTCAGGTTCTCTTGC...GCACACTGGCGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR CAA 90 bp | AGGAGTACACACAGCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACACGACCATCACCGTCACGTaGTCTGCTGAGCCCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSTHSVHKQNEPASQEHTTITVT*SAEPRC Trigger: GCAGCGGGGCTCAGCAGACAACGTGACGGTGATGGT...CGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCTGTGTGTACTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS CCA 90 bp | TCAGGGGCTTTCCTCTTTGCTCCTTTCCCTTCAGTCTTCACCACCTaGGAACCTGATGTGGCAAGAGAACCTGAATTGCCACTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGAFLFAPFPSVFTT*EPDVAREPELPLAA Trigger: TGCTGCCAGTGGCAATTCAGGTTCTCTTGCCACATCAGGTTCCCAGGTGGTGAAGACTGAAGGGAAAGGAGCAAAGAGGAAAGCCCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027534.13 ENSMUST00000186986.7 |
||
| CDS-3UTR CAA 90 bp | AGCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACACGCCAGTGTGCTGGTCTGGGGTAAAGACCTaGAAAAGCCCGTCGCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SVHKQNEPASQEHTPVCWSGVKT*KSPSQA Trigger: GGCTTGCGACGGGCTTTTCAAGGTCTTTACCCCAGA...CCAGCACACTGGCGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
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| CDS CCA 90 bp | TCTTTGCTCCTTTCCCTTCAGTCTTCACCACCTGGGAACCTGATGTaGCAAGAGAACCTGAATTGCCACTGGCAGCAGGCGGAAGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLLLSLQSSPPGNLM*QENLNCHWQQAEDH Trigger: ATGATCTTCCGCCTGCTGCCAGTGGCAATTCAGGTTCTCTTGCCACATCAGGTTCCCAGGTGGTGAAGACTGAAGGGAAAGGAGCAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027534.13 ENSMUST00000186986.7 |
||
| CDS-3UTR CAA 90 bp | CACAGCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACACGCCAGTGTGCGCGATATACAGGATGTaGTCCACAGCCAGGACACAC | + |
|
Preference number: 5 (lower is better) Translates to: HSVHKQNEPASQEHTPVCAIYRM*STARTH Trigger: GTGTGTCCTGGCTGTGGACAACATCCTGTATATCGC...GCACACTGGCGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR CAA 90 bp | GGAGTACACACAGCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACACGCGTTGGGTTGTGCTCTTaGCTGAGGCTTAAGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GVHTACTNKMNLQVKSTRVGLCS*LRLKAA Trigger: CGCAGCCTTAAGCCTCAGCAAAGAGCACAACCCAAC...GCGTGTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCTGTGTGTACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR CAA 90 bp | CACAGGAGTACACACAGCGTGCACAAACAAAATGAACCTGCAAGTCAAGAGCACTCCCGGGTCTGGATCTaGTCATCCTCAAGGCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HRSTHSVHKQNEPASQEHSRVWI*SSSRQD Trigger: GTCCTGCCTTGAGGATGACAAGATCCAGACCCGGGA...GTGCTCTTGACTTGCAGGTTCATTTTGTTTGTGCACGCTGTGTGTACTCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCACAAACAACCCCGCTGCACTGCCTaGTTGGCCAGCCTGTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LYLQPWKSHRSTHSVHKQPRCTA*LASLLH Trigger: ATGCAACAGGCTGGCCAACAAGGCAGTGCAGCGGGG...TTGTTTGTGCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
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| CDS-3UTR CAA 90 bp | GATCTGAGTGAACAGGGCACCAGCCTCTGTCATTCTTTTAAGACACTACACCAGTCTGGGGTAAAGACCTaGAAAAGCCCGTCGCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DLSEQGTSLCHSFKTLHQSGVKT*KSPSQA Trigger: GGCTTGCGACGGGCTTTTCAAGGTCTTTACCCCAGA...CTGGTGTAGTGTCTTAAAAGAATGACAGAGGCTGGTGCCCTGTTCACTCAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
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| CDS-3UTR CAA 90 bp | ATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCACAAACAAAATGCGCTGCACTGCCTTGTaGGCCAGCCTGTTGCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: IYNHGSPTGVHTACTNKMRCTAL*ASLLHA Trigger: TGCATGCAACAGGCTGGCCAACAAGGCAGTGCAGCG...CATTTTGTTTGTGCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
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| CDS-3UTR CAA 90 bp | CCAAAGGGATGGGATCTGAGTGAACAGGGCACCAGCCTCTGTCATTCTTTTAAGCGACTATCTCCAAGGTaGGCGATATACAGGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PKGWDLSEQGTSLCHSFKRLSPR*AIYRML Trigger: CAACATCCTGTATATCGCCAACCTTGGAGATAGTCG...CTTAAAAGAATGACAGAGGCTGGTGCCCTGTTCACTCAGATCCCATCCCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
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| CDS CCA 90 bp | ATGTCTCACCTCAAGGCAGGACAAGATGAAGTTCACAGCTTCTTCTaGGGTAAAGACCTTGAAAAGCCCGTCGCAAGCCAGCAAAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: MSHLKAGQDEVHSFF*GKDLEKPVASQQNE Trigger: TTCATTTTGCTGGCTTGCGACGGGCTTTTCAAGGTCTTTACCCCAGAAGAAGCTGTGAACTTCATCTTGTCCTGCCTTGAGGTGAGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
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| CDS-3UTR CAA 90 bp | TCAAACACAGCAAAGTATGAAACCCGAGTAATGAGAGATGATGGAGGATTACACGCAAGAGAACCTGAATaGCCACTGGCAGCAGGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: SNTAKYETRVMRDDGGLHAREPE*PLAAGG Trigger: TCCGCCTGCTGCCAGTGGCAATTCAGGTTCTCTTGC...GTGTAATCCTCCATCATCTCTCATTACTCGGGTTTCATACTTTGCTGTGTTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186986.7 |
||
| CDS-3UTR CAA 90 bp | AAGAAACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCACAGGGGCTTTCCTCTTaGCTCCTTTCCCTTCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KKPLFTTMEVPQEYTQRAQGLSS*LLSLQS Trigger: AGACTGAAGGGAAAGGAGCAAAGAGGAAAGCCCCTG...TGCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
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| CDS-3UTR CAA 90 bp | AAAAGAAACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGAAAATGAACCTGTCATaGGGGGTCAGCTGGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: KRNLYLQPWKSHRSTHSVKMNLS*GVSWQR Trigger: ACGCTGCCAGCTGACCCCCAATGACAGGTTCATTTT...CACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGTTTCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
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| CDS-3UTR CAA 90 bp | AACTCTTCATCGGTGTGCTTAAAAGTATCTAGCAGACACCTCTTTACAGTCTTCCAGGGGCTTTCCTCTTaGCTCCTTTCCCTTCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSSSVCLKVSSRHLFTVFQGLSS*LLSLQS Trigger: AGACTGAAGGGAAAGGAGCAAAGAGGAAAGCCCCTG...GAAGACTGTAAAGAGGTGTCTGCTAGATACTTTTAAGCACACCGATGAAGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187049.7 |
||
| CDS-3UTR CAA 90 bp | AAAAAGAAACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTAGGCAGGCTTCTGGCTaGAAGCCTGTTTCAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: KKKPLFTTMEVPQEYTQRRQASG*KPVSGT Trigger: AGTTCCTGAAACAGGCTTCAAGCCAGAAGCCTGCCT...ACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGTTTCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
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| CDS-3UTR CAA 90 bp | AAAGAAACCTTTATTTACAACCATGGAAGTCCCACAGGAGTACACACAGCGTGCCGACTATCTCCAAGGTaGGCGATATACAGGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KETFIYNHGSPTGVHTACRLSPR*AIYRML Trigger: CAACATCCTGTATATCGCCAACCTTGGAGATAGTCG...GCACGCTGTGTGTACTCCTGTGGGACTTCCATGGTTGTAAATAAAGGTTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS-3UTR CAA 90 bp | CTCTTTACAGTCTTCTCCACACTGATTATATCTCCTTTAGGAAATTTCCTGATTCAGGGGCTTTCCTCTTaGCTCCTTTCCCTTCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LFTVFSTLIISPLGNFLIQGLSS*LLSLQS Trigger: AGACTGAAGGGAAAGGAGCAAAGAGGAAAGCCCCTG...AATCAGGAAATTTCCTAAAGGAGATATAATCAGTGTGGAGAAGACTGTAAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186986.7 ENSMUST00000187049.7 |
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| CDS CCA 72 bp | GAGCACGGGTCGTCCCTGTGCTTCCTTCCCGGCAGATaGCCGCGGCGCGCGCTCGGGCTCCGGCAGGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: EHGSSLCFLPGR*PRRALGLRQVP Trigger: GGGGACCTGCCGGAGCCCGAGCGCGCGCCGCGGCCATCTGCCGGGAAGGAAGCACAGGGACGACCCGTGCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000027534.13 ENSMUST00000186986.7 ENSMUST00000187049.7 ENSMUST00000187306.7 ENSMUST00000187678.7 ENSMUST00000190519.2 |
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| CDS CCA 72 bp | AGAGTAAAGGTCCCCCAGAGCCTGAGTCAGTACTGCTaGCCGGGGGCAGGTCCTCAAAGAGCACGGGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: RVKVPQSLSQYC*PGAGPQRARVV Trigger: GACGACCCGTGCTCTTTGAGGACCTGCCCCCGGCCAGCAGTACTGACTCAGGCTCTGGGGGACCTTTACTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000027534.13 ENSMUST00000186986.7 ENSMUST00000187049.7 ENSMUST00000187306.7 ENSMUST00000190519.2 |
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| CDS GCA 72 bp | CAAAGAGTAAAGGTCCCCCAGAGCCTGAGTCAGTACTaGTGGCCGGGGGCAGGTCCTCAAAGAGCACGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: QRVKVPQSLSQY*WPGAGPQRARV Trigger: GACCCGTGCTCTTTGAGGACCTGCCCCCGGCCAGCAGTACTGACTCAGGCTCTGGGGGACCTTTACTCTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000027534.13 ENSMUST00000186986.7 ENSMUST00000187049.7 ENSMUST00000187306.7 ENSMUST00000190519.2 |
||
| CDS GCA 72 bp | ACCACCATCACCGTCACGTTGTCTGCTGAGCCCCGCTaGACTGCCTTGTTGGCCAGCCTGTTGCATGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TTITVTLSAEPR*TALLASLLHAA Trigger: AGCTGCATGCAACAGGCTGGCCAACAAGGCAGTGCAGCGGGGCTCAGCAGACAACGTGACGGTGATGGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS TCA 72 bp | TCCTATCCTCACCACCATCACCGTCACGTTGTCTGCTaGGCCCCGCTGCACTGCCTTGTTGGCCAGCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SYPHHHHRHVVC*APLHCLVGQPV Trigger: AACAGGCTGGCCAACAAGGCAGTGCAGCGGGGCTCAGCAGACAACGTGACGGTGATGGTGGTGAGGATAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027534.13 |
||
| CDS CCA 72 bp | ACAGGATGTTGTCCACAGCCAGGACACACGTGGCAGTaGACCCGTCTTTCCAGGCAGGCTTCTGGCTTGAAN | + |
|
Preference number: 6 (lower is better) Translates to: TGCCPQPGHTWQ*TRLSRQASGLX Trigger: NTTCAAGCCAGAAGCCTGCCTGGAAAGACGGGTCCACTGCCACGTGTGTCCTGGCTGTGGACAACATCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187231.2 |
||
| CDS CCA 72 bp | CTTTCCCTTCAGTCTTCACCACCTGGGAACCTGATGTaGCAAGAGAACCTGAATTGCCACTGGCAGCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LSLQSSPPGNLM*QENLNCHWQQA Trigger: CGCCTGCTGCCAGTGGCAATTCAGGTTCTCTTGCCACATCAGGTTCCCAGGTGGTGAAGACTGAAGGGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027534.13 ENSMUST00000186986.7 |
||
| CDS TCA 72 bp | TGCTCCTTTCCCTTCAGTCTTCACCACCTGGGAACCTaGATTGCCACTGGCAGCAGGCGGAAGATCATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: CSFPFSLHHLGT*IATGSRRKIIK Trigger: TTTGATGATCTTCCGCCTGCTGCCAGTGGCAATTCAGGTTCCCAGGTGGTGAAGACTGAAGGGAAAGGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187049.7 ENSMUST00000190519.2 |
||
| CDS GCA 72 bp | CCACCTGGGAACCTGATGTGGCAAGAGAACCTGAATTaGCACTGGCAGCAGGCGGAAGATCATCAAAGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: PPGNLMWQENLN*HWQQAEDHQRV Trigger: TACTCTTTGATGATCTTCCGCCTGCTGCCAGTGGCAATTCAGGTTCTCTTGCCACATCAGGTTCCCAGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027534.13 ENSMUST00000186986.7 |
||
| CDS GCA 72 bp | CTTTCCCTTCAGTCTTCACCACCTGGGAACCTGAATTaGCACTGGCAGCAGGCGGAAGATCATCAAAGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: LSLQSSPPGNLN*HWQQAEDHQRV Trigger: TACTCTTTGATGATCTTCCGCCTGCTGCCAGTGGCAATTCAGGTTCCCAGGTGGTGAAGACTGAAGGGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187049.7 ENSMUST00000190519.2 |
||
| CDS CCA 72 bp | GGGAACCTGATGTGGCAAGAGAACCTGAATTGCCACTaGCAGCAGGCGGAAGATCATCAAAGAGTAAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GNLMWQENLNCH*QQAEDHQRVKV Trigger: GACCTTTACTCTTTGATGATCTTCCGCCTGCTGCCAGTGGCAATTCAGGTTCTCTTGCCACATCAGGTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027534.13 ENSMUST00000186986.7 |
||
| CDS CCA 72 bp | CTTCAGTCTTCACCACCTGGGAACCTGAATTGCCACTaGCAGCAGGCGGAAGATCATCAAAGAGTAAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LQSSPPGNLNCH*QQAEDHQRVKV Trigger: GACCTTTACTCTTTGATGATCTTCCGCCTGCTGCCAGTGGCAATTCAGGTTCCCAGGTGGTGAAGACTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187049.7 ENSMUST00000190519.2 |
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| CDS GCA 72 bp | AAAAGCCCGTCGCAAGCCAGCAAAATGAACCTGAATTaGCACTGGCAGCAGGCGGAAGATCATCAAAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: KSPSQASKMNLN*HWQQAEDHQRV Trigger: TACTCTTTGATGATCTTCCGCCTGCTGCCAGTGGCAATTCAGGTTCATTTTGCTGGCTTGCGACGGGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187306.7 |
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