Pregenerated sensors for ILK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030890Ensembl transcript IDs: ENSMUST00000033182.10, ENSMUST00000127298.4, ENSMUST00000130565.8, ENSMUST00000136687.9, ENSMUST00000149695.8, ENSMUST00000153557.2, ENSMUST00000163389.9
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTTCAGGGGCCACCCAGGCAGGCGCATACATGCGCCCAGGGCACTaGAAAGAAAACTTAACATCAGCCATGCTGATTCGGGCAGTCATA | + |
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Preference number: 1 (lower is better) Translates to: ASGATQAGAYMRPGH*KENLTSAMLIRAVI Trigger: TATGACTGCCCGAATCAGCATGGCTGATGTTAAGTTTTCTTTCCAGTGCCCTGGGCGCATGTATGCGCCTGCCTGGGTGGCCCCTGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
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| 3UTR CCA 90 bp | GGGGCTACAGTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTaGGGTAGTACCATGATTAGAGACAGGGGAGGCAACCAGAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: GATVVGMGAGNKSHN*GSTMIRDRGGNQRS Trigger: AGACCTCTGGTTGCCTCCCCTGTCTCTAATCATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCACTGTAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
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| 3UTR TCA 90 bp | TGCGAGTGGTCCCCTTCCAGAATGTGTCCTTGTATGGAATACGGTTaGGATTCTGGCCCATTTTCTCTGCCCGTTCTCGGAGAAGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: CEWSPSRMCPCMEYG*DSGPFSLPVLGEAL Trigger: GAGAGCTTCTCCGAGAACGGGCAGAGAAAATGGGCCAGAATCTCAACCGTATTCCATACAAGGACACATTCTGGAAGGGGACCACTCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
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| 3UTR GCA 90 bp | AGCTTGGCTCTGGTCCACAACGAAATTTTTCAGTACTACTTGGGGTaGCTTGGACACAACAGCTTCCAATTCAGTGTCCCACCTGAGCCG | + |
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Preference number: 1 (lower is better) Translates to: SLALVHNEIFQYYLG*LGHNSFQFSVPPEP Trigger: CGGCTCAGGTGGGACACTGAATTGGAAGCTGTTGTGTCCAAGGCACCCCAAGTAGTACTGAAAAATTTCGTTGTGGACCAGAGCCAAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
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| 3UTR TCA 90 bp | CTGCGGCTATTGAGTGCATGCCGGGGTATGAGAGGCTCTAGTGTGTaGAGAAAAGCCATGCCTCTTGCCATGTCCAAAGCAAACTTTACA | + |
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Preference number: 1 (lower is better) Translates to: LRLLSACRGMRGSSV*RKAMPLAMSKANFT Trigger: TGTAAAGTTTGCTTTGGACATGGCAAGAGGCATGGCTTTTCTTCACACACTAGAGCCTCTCATACCCCGGCATGCACTCAATAGCCGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000127298.4 ENSMUST00000130565.8 ENSMUST00000149695.8 |
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| 3UTR CCA 90 bp | TTTGCAGGGTCTTCATTCATGCAAATCTTCATGAGCTTACACACATaGGGGGAAATACCTGGTGGGATGGTAGGCCGAAGGCCTTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: FAGSSFMQIFMSLHT*GEIPGGMVGRRPSS Trigger: ACTGGAAGGCCTTCGGCCTACCATCCCACCAGGTATTTCCCCCCATGTGTGTAAGCTCATGAAGATTTGCATGAATGAAGACCCTGCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
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| 3UTR TCA 90 bp | ACCTTCACAACAATATCATTGCCCTGCCAGCGGCCTTTCCAAAGCTaGAGGACAGAGGATAGGAAGCATTATCTCAGGCTGTACTGTTTC | + |
|
Preference number: 1 (lower is better) Translates to: TFTTISLPCQRPFQS*RTEDRKHYLRLYCF Trigger: GAAACAGTACAGCCTGAGATAATGCTTCCTATCCTCTGTCCTTCAGCTTTGGAAAGGCCGCTGGCAGGGCAATGATATTGTTGTGAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
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| 3UTR CCA 90 bp | TTTACAGCTTGGCTCTGGTCCACAACGAAATTTTTCAGTACTACTTaGGGTGCCTTGGACACAACAGCTTCCAATTCAGTGTCCCACCTG | + |
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Preference number: 1 (lower is better) Translates to: FTAWLWSTTKFFSTT*GALDTTASNSVSHL Trigger: CAGGTGGGACACTGAATTGGAAGCTGTTGTGTCCAAGGCACCCCAAGTAGTACTGAAAAATTTCGTTGTGGACCAGAGCCAAGCTGTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
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| 3UTR CCA 90 bp | AAAAGAGTGGTGAGACCCAACAGAATCTCACTTTTCAGTACTACTTaGGGTGCCTTGGACACAACAGCTTCCAATTCAGTGTCCCACCTG | + |
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Preference number: 1 (lower is better) Translates to: KRVVRPNRISLFSTT*GALDTTASNSVSHL Trigger: CAGGTGGGACACTGAATTGGAAGCTGTTGTGTCCAAGGCACCCCAAGTAGTACTGAAAAGTGAGATTCTGTTGGGTCTCACCACTCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
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| 3UTR CCA 90 bp | CCTTCCCCTATTCTAGTCCCTCCCCAACAAGACCAACATCCTTACTaGTGCCTTCATGTAGAACATTGTAGAGAGATCCATATGGCATCC | + |
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Preference number: 1 (lower is better) Translates to: PSPILVPPQQDQHPY*CLHVEHCREIHMAS Trigger: GGATGCCATATGGATCTCTCTACAATGTTCTACATGAAGGCACCAGTAAGGATGTTGGTCTTGTTGGGGAGGGACTAGAATAGGGGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
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| 3UTR GCA 90 bp | TCCCCTATTCTAGTCCCTCCCCAACAAGACCAACATCCTTACTGGTaGCTTCATGTAGAACATTGTAGAGAGATCCATATGGCATCCAGT | + |
|
Preference number: 1 (lower is better) Translates to: SPILVPPQQDQHPYW*LHVEHCREIHMASS Trigger: ACTGGATGCCATATGGATCTCTCTACAATGTTCTACATGAAGGCACCAGTAAGGATGTTGGTCTTGTTGGGGAGGGACTAGAATAGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
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| 3UTR GCA 90 bp | CCAGCGGCCTTTCCAAAGCTCTCCAGAATGATTCTCATTGAGCTTTaGCAGAAAGTTGAGCTGTTTGAAGTCAATACCGGAGTGTTTGTT | + |
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Preference number: 1 (lower is better) Translates to: PAAFPKLSRMILIEL*QKVELFEVNTGVFV Trigger: AACAAACACTCCGGTATTGACTTCAAACAGCTCAACTTTCTGGCAAAGCTCAATGAGAATCATTCTGGAGAGCTTTGGAAAGGCCGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
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| 3UTR TCA 90 bp | GTTACGAAGGGAGAAACAAAAAGGGTGGGGATCACCTCTCCAGAATaGTTCTCATTGAGCTTTGCCAGAAAGTTGAGCTGTTTGAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: VTKGETKRVGITSPE*FSLSFARKLSCLKS Trigger: TGACTTCAAACAGCTCAACTTTCTGGCAAAGCTCAATGAGAATCATTCTGGAGAGGTGATCCCCACCCTTTTTGTTTCTCCCTTCGTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
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| 3UTR CCA 90 bp | AGAAAAGCCATGCCTCTTGCCATGTCCAAAGCAAACTTTACAGCTTaGCTCTGGTCCACAACGAAATCTAACAGGAAGCAAGAATCATTC | + |
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Preference number: 1 (lower is better) Translates to: RKAMPLAMSKANFTA*LWSTTKSNRKQESF Trigger: GAATGATTCTTGCTTCCTGTTAGATTTCGTTGTGGACCAGAGCCAAGCTGTAAAGTTTGCTTTGGACATGGCAAGAGGCATGGCTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
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| 3UTR GCA 90 bp | AAAAAGGGTGGGGATCACCTCTCCAGAATGATTCTCATTGAGCTTTaGCAGAAAGTTGAGCTGTTTGAAGTCAATACCGGAGTGTTTGTT | + |
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Preference number: 1 (lower is better) Translates to: KKGGDHLSRMILIEL*QKVELFEVNTGVFV Trigger: AACAAACACTCCGGTATTGACTTCAAACAGCTCAACTTTCTGGCAAAGCTCAATGAGAATCATTCTGGAGAGGTGATCCCCACCCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
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| 3UTR TCA 90 bp | ATAGGAAGCATTATCTCAGGCTGTACTGTTTCTTTTCTACTAACTTaGAGAAAAACCTTAATTAGGGATACAGAGTGGGCAGTTTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: IGSIISGCTVSFLLT*RKTLIRDTEWAVCG Trigger: CCCACAAACTGCCCACTCTGTATCCCTAATTAAGGTTTTTCTTCAAGTTAGTAGAAAAGAAACAGTACAGCCTGAGATAATGCTTCCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGGGCTTCAGGGGCCACCCAGGCAGGCGCATACATGCGCCCAGGGCACTGGAGTTTGGGCAAGGACCTaGAGGTCCTACTTGTCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: AGLQGPPRQAHTCAQGTGVWART*RSYLSC Trigger: GCAGGACAAGTAGGACCTTCAGGTCCTTGCCCAAAC...TCCAGTGCCCTGGGCGCATGTATGCGCCTGCCTGGGTGGCCCCTGAAGCCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
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| 3UTR CAA 90 bp | CCCACAGAAGCACCGCGAAACTCCACATGTCTGCTGAGCGTCTGTTaGTGTCTTCAGGCTTCTTCTGCAGGGCTTCAGGGGCCACCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: PTEAPRNSTCLLSVC*CLQASSAGLQGPPR Trigger: CCTGGGTGGCCCCTGAAGCCCTGCAGAAGAAGCCTGAAGACACAAACAGACGCTCAGCAGACATGTGGAGTTTCGCGGTGCTTCTGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGGCCACCCAGGCAGGCGCATACATGCGCCCAGGGCACTGGAAAGAAAACTTCCCCCAGCCATGTTTTaGCACTTCTGGAGTTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: RGHPGRRIHAPRALERKLPPAMF*HFWSLG Trigger: GCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGG...AAGTTTTCTTTCCAGTGCCCTGGGCGCATGTATGCGCCTGCCTGGGTGGCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
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| 3UTR-3UTR GCA 90 bp | CAATTCAGTGTCCCACCTGAGCCGGGGACATTCCTCATTGAAGTCCCTGCTTTTAGCCACCAGGTCCTCTaGCACCTGGTCTTGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: QFSVPPEPGTFLIEVPAFSHQVL*HLVLAP Trigger: TGGGGCCAAGACCAGGTGGCAGAGGACCTGGTGGCT...AAAAGCAGGGACTTCAATGAGGAATGTCCCCGGCTCAGGTGGGACACTGAATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
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| 3UTR-3UTR GCA 90 bp | GGAAATACCTGGTGGGATGGTAGGCCGAAGGCCTTCCAGTGCCACCTTCATCCCTCACAACAATATCATTaGCCTGCCAGCGGCCTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: GNTWWDGRPKAFQCHLHPSQQYH*PASGLS Trigger: GGAAAGGCCGCTGGCAGGGCAATGATATTGTTGTGA...GGGATGAAGGTGGCACTGGAAGGCCTTCGGCCTACCATCCCACCAGGTATTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
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| 3UTR-3UTR GCA 90 bp | GCGCCCAGGGCACTGGAAAGAAAACTTAACATCAGCCATGCTGATTCGGGCAGTCGGCTATTGAGTGCATaGCGGGGTATGAGAGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: APRALERKLNISHADSGSRLLSA*RGMRGS Trigger: AGAGCCTCTCATACCCCGGCATGCACTCAATAGCCG...ACTGCCCGAATCAGCATGGCTGATGTTAAGTTTTCTTTCCAGTGCCCTGGGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
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| 3UTR-3UTR CCA 90 bp | CGGAGTGTTTGTTCAGGGTCCCATTTCGGGGCCTTGTGCGAGTGGTCCCCTTCCGAGAAACAAAAAGGGTaGGGATCACCTCTCCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: RSVCSGSHFGALCEWSPSEKQKG*GSPLQN Trigger: ATTCTGGAGAGGTGATCCCCACCCTTTTTGTTTCTC...GGAAGGGGACCACTCGCACAAGGCCCCGAAATGGGACCCTGAACAAACACTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGATTCCCCCAGCCATGTTTTaGCACTTCTGGAGTTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: VVGMGAGNKSHNWGSTMIPPAMF*HFWSLG Trigger: GCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGG...AATCATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
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| 3UTR-3UTR TCA 90 bp | GTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTGTGACAGGCGGGGCTaGTCCCTCCCATGTTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: VFNFGEVYSPSHVLTLLECDRRG*SLPCWE Trigger: CTCCCAACATGGGAGGGATCAGCCCCGCCTGTCACA...CTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTTAAAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
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| 3UTR CAA 90 bp | GTGCGAGTGGTCCCCTTCCAGAATGTGTCCTTGTATGGAATACGGTaGAGATTCTGGCCCATTTTCTCTGCCCGTTCTCGGAGAAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: VRVVPFQNVSLYGIR*RFWPIFSARSRRSS Trigger: AGAGCTTCTCCGAGAACGGGCAGAGAAAATGGGCCAGAATCTCAACCGTATTCCATACAAGGACACATTCTGGAAGGGGACCACTCGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
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| 3UTR CAA 90 bp | AGCTTTGCCAGAAAGTTGAGCTGTTTGAAGTCAATACCGGAGTGTTaGTTCAGGGTCCCATTTCGGGGCCTTGTGCGAGTGGTCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SFARKLSCLKSIPEC*FRVPFRGLVRVVPF Trigger: GAAGGGGACCACTCGCACAAGGCCCCGAAATGGGACCCTGAACAAACACTCCGGTATTGACTTCAAACAGCTCAACTTTCTGGCAAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127298.4 ENSMUST00000149695.8 |
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| 3UTR-3UTR GCA 90 bp | CACAACAGCTTCCAATTCAGTGTCCCACCTGAGCCGGGGACATTCCTCATTGAAAAGCTCTCTAAGGGGTaGCTTGGCTTTGTCCACAGG | + |
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Preference number: 2 (lower is better) Translates to: HNSFQFSVPPEPGTFLIEKLSKG*LGFVHR Trigger: CCTGTGGACAAAGCCAAGGCACCCCTTAGAGAGCTT...TTCAATGAGGAATGTCCCCGGCTCAGGTGGGACACTGAATTGGAAGCTGTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
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| 3UTR-3UTR GCA 90 bp | AAGCCATGCCTCTTGCCATGTCCAAAGCAAACTTTACAGCTTGGCTCTGGTCCACCGAAGGCCTTCCAGTaGCACCTTCATCCCAATCTC | + |
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Preference number: 2 (lower is better) Translates to: KPCLLPCPKQTLQLGSGPPKAFQ*HLHPNL Trigger: GAGATTGGGATGAAGGTGGCACTGGAAGGCCTTCGG...TGGACCAGAGCCAAGCTGTAAAGTTTGCTTTGGACATGGCAAGAGGCATGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGCAAGTGACAAAGCTCTaGGCCCAGCCCCTTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: VFNFGEVYSPSHVLTLLEQVTKL*AQPLLG Trigger: CCCCAAAAGGGGCTGGGCTCAGAGCTTTGTCACTTG...CTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTTAAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCAAGATAGGCACAATCATGTCAAACTTGGGTCGCTTTGCAGGGTCTTCACCCCCAGCCATGTTTTaGCACTTCTGGAGTTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: FSKIGTIMSNLGRFAGSSPPAMF*HFWSLG Trigger: GCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGG...TGAAGACCCTGCAAAGCGACCCAAGTTTGACATGATTGTGCCTATCTTGGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGCCCCCAGCCATGTTTTaGCACTTCTGGAGTTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: VFNFGEVYSPSHVLTLLEPPAMF*HFWSLG Trigger: GCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGG...CTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTTAAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000033182.10 ENSMUST00000130565.8 ENSMUST00000149695.8 ENSMUST00000163389.9 |
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| 3UTR-3UTR TCA 90 bp | CTCCAAGATAGGCACAATCATGTCAAACTTGGGTCGCTTTGCAGGGTCTTCATTGTGCATGCCGGGGTATaGGAGGCTCTAGTGTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: LQDRHNHVKLGSLCRVFIVHAGV*EALVCE Trigger: TTCACACACTAGAGCCTCTCATACCCCGGCATGCAC...AATGAAGACCCTGCAAAGCGACCCAAGTTTGACATGATTGTGCCTATCTTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
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| 3UTR-3UTR TCA 90 bp | ATAATAAACTTTATTGTGACAGGCGGGGCTGATCCCTCCCATGTTGGGAGACATACTGGGGTAGTACCATaGTTAGAGACAGGGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: IINFIVTGGADPSHVGRHTGVVP*LETGEA Trigger: TGCCTCCCCTGTCTCTAATCATGGTACTACCCCAGT...ATGTCTCCCAACATGGGAGGGATCAGCCCCGCCTGTCACAATAAAGTTTATTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
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| 3UTR-3UTR CCA 90 bp | CATCCCAATCTCCATATTAGAGAGGTCAGCAAAGGGCACCTCTCGTGTCACCAGATTAGGGATACAGAGTaGGCAGTTTGTGGGTGTTAC | + |
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Preference number: 2 (lower is better) Translates to: HPNLHIREVSKGHLSCHQIRDTE*AVCGCY Trigger: GTAACACCCACAAACTGCCCACTCTGTATCCCTAAT...CTGGTGACACGAGAGGTGCCCTTTGCTGACCTCTCTAATATGGAGATTGGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
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| 3UTR CAA 90 bp | CTTTACAGCTTGGCTCTGGTCCACAACGAAATTTTTCAGTACTACTaGGGGTGCCTTGGACACAACAGCTTCCAATTCAGTGTCCCACCT | + |
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Preference number: 2 (lower is better) Translates to: LYSLALVHNEIFQYY*GCLGHNSFQFSVPP Trigger: AGGTGGGACACTGAATTGGAAGCTGTTGTGTCCAAGGCACCCCAAGTAGTACTGAAAAATTTCGTTGTGGACCAGAGCCAAGCTGTAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
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| 3UTR-3UTR GCA 90 bp | ATATCTTCATCGATCATTACACTGCGGCTATTGAGTGCATGCCGGGGTATGAGATCACAACAATATCATTaGCCTGCCAGCGGCCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: ISSSIITLRLLSACRGMRSQQYH*PASGLS Trigger: GGAAAGGCCGCTGGCAGGGCAATGATATTGTTGTGA...TCTCATACCCCGGCATGCACTCAATAGCCGCAGTGTAATGATCGATGAAGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127298.4 ENSMUST00000149695.8 |
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| 3UTR CAA 90 bp | TACTTGTCCTGCATCTTCTCCAAGATAGGCACAATCATGTCAAACTaGGGTCGCTTTGCAGGGTCTTCATTCATGCAAATCTTCATGAGC | + |
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Preference number: 2 (lower is better) Translates to: YLSCIFSKIGTIMSN*GRFAGSSFMQIFMS Trigger: GCTCATGAAGATTTGCATGAATGAAGACCCTGCAAAGCGACCCAAGTTTGACATGATTGTGCCTATCTTGGAGAAGATGCAGGACAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
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| 3UTR-3UTR TCA 90 bp | TGCCATGTCCAAAGCAAACTTTACAGCTTGGCTCTGGTCCACAACGAAATTTTTTGTATGGAATACGGTTaGGATTCTGGCCCATTTTCT | + |
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Preference number: 2 (lower is better) Translates to: CHVQSKLYSLALVHNEIFCMEYG*DSGPFS Trigger: AGAAAATGGGCCAGAATCTCAACCGTATTCCATACA...AAAAATTTCGTTGTGGACCAGAGCCAAGCTGTAAAGTTTGCTTTGGACATGGCA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
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| 3UTR-3UTR GCA 90 bp | AAACTTTACAGCTTGGCTCTGGTCCACAACGAAATTTTTCAGTACTACTTGGGGATTCTCATTGAGCTTTaGCAGAAAGTTGAGCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: KLYSLALVHNEIFQYYLGILIEL*QKVELF Trigger: AAACAGCTCAACTTTCTGGCAAAGCTCAATGAGAAT...CCCCAAGTAGTACTGAAAAATTTCGTTGTGGACCAGAGCCAAGCTGTAAAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
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| 3UTR CCA 72 bp | GCCACCCAGGCAGGCGCATACATGCGCCCAGGGCACTaGAAAGAAAACTTAACATCAGCCATGCTGATTCGG | + |
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Preference number: 3 (lower is better) Translates to: ATQAGAYMRPGH*KENLTSAMLIR Trigger: CCGAATCAGCATGGCTGATGTTAAGTTTTCTTTCCAGTGCCCTGGGCGCATGTATGCGCCTGCCTGGGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
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| 3UTR-3UTR CAA 90 bp | GGGGAAATACCTGGTGGGATGGTAGGCCGAAGGCCTTCCAGTGCCACCTTCATCCTGCTGAGCGTCTGTTaGTGTCTTCAGGCTTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: GEIPGGMVGRRPSSATFILLSVC*CLQASS Trigger: AGAAGAAGCCTGAAGACACAAACAGACGCTCAGCAG...GATGAAGGTGGCACTGGAAGGCCTTCGGCCTACCATCCCACCAGGTATTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
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| 3UTR GCA 72 bp | CGGAGTGTTTGTTCAGGGTCCCATTTCGGGGCCTTGTaGGAGTGGTCCCCTTCCAGAATGTGTCCTTGTATG | + |
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Preference number: 3 (lower is better) Translates to: RSVCSGSHFGAL*EWSPSRMCPCM Trigger: CATACAAGGACACATTCTGGAAGGGGACCACTCGCACAAGGCCCCGAAATGGGACCCTGAACAAACACTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000127298.4 ENSMUST00000149695.8 ENSMUST00000153557.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGGCAGGCGCATACATGCGCCCAGGGCACTGGAAAGAAAACTTAACATCAGCTACAGAGTGGGCAGTTaGTGGGTGTTACGAAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: PGRRIHAPRALERKLNISYRVGS*WVLRRE Trigger: CTCCCTTCGTAACACCCACAAACTGCCCACTCTGTA...GCTGATGTTAAGTTTTCTTTCCAGTGCCCTGGGCGCATGTATGCGCCTGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
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| 3UTR CCA 72 bp | GTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTaGGGTAGTACCATGATTAGAGACAGGGGAGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: VVGMGAGNKSHN*GSTMIRDRGGN Trigger: GTTGCCTCCCCTGTCTCTAATCATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGTCCCCCAGCCATGTTTaGACACTTCTGGAGTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TVVGMGAGNKSHNWGSTMSPSHV*TLLEFG Trigger: CCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGA...CATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCACTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCATTACACTGCGGCTATTGAGTGCATGCCGGGGTATGAGAGGCTCTAGTGTGTCTCTAAGGGGTGCCTaGGCTTTGTCCACAGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: IITLRLLSACRGMRGSSVSLRGA*ALSTGI Trigger: GATGCCTGTGGACAAAGCCAAGGCACCCCTTAGAGA...CACACTAGAGCCTCTCATACCCCGGCATGCACTCAATAGCCGCAGTGTAATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAGATAGGCACAATCATGTCAAACTTGGGTCGCTTTGCAGGGTCTTCATTCTCCCATTTCGGGGCCTaGTGCGAGTGGTCCCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SKIGTIMSNLGRFAGSSFSHFGA*CEWSPS Trigger: GGAAGGGGACCACTCGCACAAGGCCCCGAAATGGGA...GAATGAAGACCCTGCAAAGCGACCCAAGTTTGACATGATTGTGCCTATCTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCCAATTCAGTGTCCCACCTGAGCCGGGGACATTCCTCATTGAAGTCCCTGTTCACAACAATATCATaGCCCTGCCAGCGGCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ASNSVSHLSRGHSSLKSLFTTIS*PCQRPF Trigger: GAAAGGCCGCTGGCAGGGCAATGATATTGTTGTGAA...CAGGGACTTCAATGAGGAATGTCCCCGGCTCAGGTGGGACACTGAATTGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127298.4 ENSMUST00000149695.8 |
||
| 3UTR TCA 72 bp | TTCCCACAGAAGCACCGCGAAACTCCACATGTCTGCTaGGCGTCTGTTTGTGTCTTCAGGCTTCTTCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FPQKHRETPHVC*ASVCVFRLLLQ Trigger: CTGCAGAAGAAGCCTGAAGACACAAACAGACGCTCAGCAGACATGTGGAGTTTCGCGGTGCTTCTGTGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
||
| 3UTR GCA 72 bp | TTTCTCTGCCCGTTCTCGGAGAAGCTCTCTAAGGGGTaGCTTGGCTTTGTCCACAGGCATCTCTCCATACTT | + |
|
Preference number: 3 (lower is better) Translates to: FLCPFSEKLSKG*LGFVHRHLSIL Trigger: AAGTATGGAGAGATGCCTGTGGACAAAGCCAAGGCACCCCTTAGAGAGCTTCTCCGAGAACGGGCAGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGATTTCCCCCAGCCATGTTTaGACACTTCTGGAGTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VVGMGAGNKSHNWGSTMISPSHV*TLLEFG Trigger: CCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGA...AATCATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
||
| 3UTR-3UTR CAA 90 bp | CACCTTCATCCCAATCTCCATATTAGAGAGGTCAGCAAAGGGCACCTCTCGTGTCTGATCCCTCCCATGTaGGGAGACATCATGTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: HLHPNLHIREVSKGHLSCLIPPM*GDIMWQ Trigger: TTGCCACATGATGTCTCCCAACATGGGAGGGATCAG...ACACGAGAGGTGCCCTTTGCTGACCTCTCTAATATGGAGATTGGGATGAAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| 3UTR TCA 72 bp | TTGAGTGCATGCCGGGGTATGAGAGGCTCTAGTGTGTaGAGAAAAGCCATGCCTCTTGCCATGTCCAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSACRGMRGSSV*RKAMPLAMSKA Trigger: TGCTTTGGACATGGCAAGAGGCATGGCTTTTCTTCACACACTAGAGCCTCTCATACCCCGGCATGCACTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000127298.4 ENSMUST00000130565.8 ENSMUST00000149695.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGTTGGGAGACATCATGTGGCAAGTGACAAAGCTCTGAGCCCAGCCCCTTTTCAGAGGTCTTTAACTTaGGAGAAGTGTACTCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: HVGRHHVASDKALSPAPFQRSLT*EKCTPP Trigger: TGGGGGAGTACACTTCTCCAAAGTTAAAGACCTCTG...AAAAGGGGCTGGGCTCAGAGCTTTGTCACTTGCCACATGATGTCTCCCAACATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCCAATTCAGTGTCCCACCTGAGCCGGGGACATTCCTCATTGAAGTCCCTGTTGTATGGAATACGGTaGAGATTCTGGCCCATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ASNSVSHLSRGHSSLKSLLYGIR*RFWPIF Trigger: GAAAATGGGCCAGAATCTCAACCGTATTCCATACAA...CAGGGACTTCAATGAGGAATGTCCCCGGCTCAGGTGGGACACTGAATTGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127298.4 ENSMUST00000149695.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAGGAGCAAACTTTACAGCTaGGCTCTGGTCCACAACGAA | + |
|
Preference number: 3 (lower is better) Translates to: WRSVLPQPCFDTSGVWARSKLYS*ALVHNE Trigger: TTCGTTGTGGACCAGAGCCAAGCTGTAAAGTTTGCT...CCTTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
||
| 3UTR TCA 72 bp | TCCCCTTCCAGAATGTGTCCTTGTATGGAATACGGTTaGGATTCTGGCCCATTTTCTCTGCCCGTTCTCGGA | + |
|
Preference number: 3 (lower is better) Translates to: SPSRMCPCMEYG*DSGPFSLPVLG Trigger: TCCGAGAACGGGCAGAGAAAATGGGCCAGAATCTCAACCGTATTCCATACAAGGACACATTCTGGAAGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
||
| 3UTR TCA 72 bp | TTGCCCTGCCAGCGGCCTTTCCAAAGCTCTCCAGAATaGTTCTCATTGAGCTTTGCCAGAAAGTTGAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LPCQRPFQSSPE*FSLSFARKLSC Trigger: ACAGCTCAACTTTCTGGCAAAGCTCAATGAGAATCATTCTGGAGAGCTTTGGAAAGGCCGCTGGCAGGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
||
| 3UTR TCA 72 bp | ACAATATCATTGCCCTGCCAGCGGCCTTTCCAAAGCTaGAGGACAGAGGATAGGAAGCATTATCTCAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TISLPCQRPFQS*RTEDRKHYLRL Trigger: CAGCCTGAGATAATGCTTCCTATCCTCTGTCCTTCAGCTTTGGAAAGGCCGCTGGCAGGGCAATGATATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| 3UTR CCA 72 bp | TGTGCGAGTGGTCCCCTTCCAGAATGTGTCCTTGTATaGAATACGGTTGAGATTCTGGCCCATTTTCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CASGPLPECVLV*NTVEILAHFLC Trigger: GCAGAGAAAATGGGCCAGAATCTCAACCGTATTCCATACAAGGACACATTCTGGAAGGGGACCACTCGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000127298.4 ENSMUST00000149695.8 ENSMUST00000153557.2 |
||
| 3UTR-3UTR CAA 90 bp | TCGGGCAGTCATATCTTCATCGATCATTACACTGCGGCTATTGAGTGCATGCCGGAAAAGCCATGCCTCTaGCCATGTCCAAAGCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: SGSHIFIDHYTAAIECMPEKPCL*PCPKQT Trigger: AGTTTGCTTTGGACATGGCAAGAGGCATGGCTTTTC...CGGCATGCACTCAATAGCCGCAGTGTAATGATCGATGAAGATATGACTGCCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
||
| 3UTR CCA 72 bp | TCTTCATTCATGCAAATCTTCATGAGCTTACACACATaGGGGGAAATACCTGGTGGGATGGTAGGCCGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSFMQIFMSLHT*GEIPGGMVGRR Trigger: CCTTCGGCCTACCATCCCACCAGGTATTTCCCCCCATGTGTGTAAGCTCATGAAGATTTGCATGAATGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAAAAGCCATGCCTCTTGCCATGTCCAAAGCAAACTTTACAGCTTGGCTCTTTCACAACAATATCATaGCCCTGCCAGCGGCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: EEKPCLLPCPKQTLQLGSFTTIS*PCQRPF Trigger: GAAAGGCCGCTGGCAGGGCAATGATATTGTTGTGAA...AGAGCCAAGCTGTAAAGTTTGCTTTGGACATGGCAAGAGGCATGGCTTTTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127298.4 ENSMUST00000149695.8 |
||
| 3UTR GCA 72 bp | CTGGTCCACAACGAAATTTTTCAGTACTACTTGGGGTaGCTTGGACACAACAGCTTCCAATTCAGTGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LVHNEIFQYYLG*LGHNSFQFSVP Trigger: TGGGACACTGAATTGGAAGCTGTTGTGTCCAAGGCACCCCAAGTAGTACTGAAAAATTTCGTTGTGGACCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
||
| 3UTR GCA 72 bp | ACCCAACAGAATCTCACTTTTCAGTACTACTTGGGGTaGCTTGGACACAACAGCTTCCAATTCAGTGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TQQNLTFQYYLG*LGHNSFQFSVP Trigger: TGGGACACTGAATTGGAAGCTGTTGTGTCCAAGGCACCCCAAGTAGTACTGAAAAGTGAGATTCTGTTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| 3UTR CCA 72 bp | TGGCTCTGGTCCACAACGAAATTTTTCAGTACTACTTaGGGTGCCTTGGACACAACAGCTTCCAATTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: WLWSTTKFFSTT*GALDTTASNSV Trigger: CACTGAATTGGAAGCTGTTGTGTCCAAGGCACCCCAAGTAGTACTGAAAAATTTCGTTGTGGACCAGAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAAGCCATGCCTCTTGCCATGTCCAAAGCAAACTTTACAGCTTGGCTCTGGTTCCAGAATGTGTCCTaGTATGGAATACGGTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RKAMPLAMSKANFTAWLWFQNVS*YGIRLR Trigger: TCTCAACCGTATTCCATACAAGGACACATTCTGGAA...CCAGAGCCAAGCTGTAAAGTTTGCTTTGGACATGGCAAGAGGCATGGCTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127298.4 ENSMUST00000149695.8 |
||
| 3UTR TCA 72 bp | GGAGAAACAAAAAGGGTGGGGATCACCTCTCCAGAATaGTTCTCATTGAGCTTTGCCAGAAAGTTGAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GETKRVGITSPE*FSLSFARKLSC Trigger: ACAGCTCAACTTTCTGGCAAAGCTCAATGAGAATCATTCTGGAGAGGTGATCCCCACCCTTTTTGTTTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| 3UTR GCA 72 bp | GGGGATCACCTCTCCAGAATGATTCTCATTGAGCTTTaGCAGAAAGTTGAGCTGTTTGAAGTCAATACCGGA | + |
|
Preference number: 3 (lower is better) Translates to: GDHLSRMILIEL*QKVELFEVNTG Trigger: TCCGGTATTGACTTCAAACAGCTCAACTTTCTGGCAAAGCTCAATGAGAATCATTCTGGAGAGGTGATCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| 3UTR CCA 72 bp | ATGCCTCTTGCCATGTCCAAAGCAAACTTTACAGCTTaGCTCTGGTCCACAACGAAATCTAACAGGAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: MPLAMSKANFTA*LWSTTKSNRKQ Trigger: TTGCTTCCTGTTAGATTTCGTTGTGGACCAGAGCCAAGCTGTAAAGTTTGCTTTGGACATGGCAAGAGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
||
| 3UTR CCA 72 bp | CTTGCCATGTCCAAAGCAAACTTTACAGCTTGGCTCTaGTCCACAACGAAATCTAACAGGAAGCAAGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: LAMSKANFTAWL*STTKSNRKQES Trigger: TGATTCTTGCTTCCTGTTAGATTTCGTTGTGGACCAGAGCCAAGCTGTAAAGTTTGCTTTGGACATGGCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
||
| 3UTR CCA 72 bp | ATTCTAGTCCCTCCCCAACAAGACCAACATCCTTACTaGTGCCTTCATGTAGAACATTGTAGAGAGATCCAT | + |
|
Preference number: 3 (lower is better) Translates to: ILVPPQQDQHPY*CLHVEHCREIH Trigger: ATGGATCTCTCTACAATGTTCTACATGAAGGCACCAGTAAGGATGTTGGTCTTGTTGGGGAGGGACTAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| 3UTR GCA 72 bp | CAAGATAGGCACAATCATGTCAAACTTGGGTCGCTTTaGAGGGTCTTCATTCATGCAAATCTTCATGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: QDRHNHVKLGSL*RVFIHANLHEL Trigger: AAGCTCATGAAGATTTGCATGAATGAAGACCCTGCAAAGCGACCCAAGTTTGACATGATTGTGCCTATCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
||
| 3UTR CCA 72 bp | ATGCCTCTTGCCATGTCCAAAGCAAACTTTACAGCTTaGCTCTGGTCCACAACGAAATTTTTCAGTACTACT | + |
|
Preference number: 3 (lower is better) Translates to: MPLAMSKANFTA*LWSTTKFFSTT Trigger: AGTAGTACTGAAAAATTTCGTTGTGGACCAGAGCCAAGCTGTAAAGTTTGCTTTGGACATGGCAAGAGGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
||
| 3UTR GCA 72 bp | TTTCCAAAGCTCTCCAGAATGATTCTCATTGAGCTTTaGCAGAAAGTTGAGCTGTTTGAAGTCAATACCGGA | + |
|
Preference number: 3 (lower is better) Translates to: FPKLSRMILIEL*QKVELFEVNTG Trigger: TCCGGTATTGACTTCAAACAGCTCAACTTTCTGGCAAAGCTCAATGAGAATCATTCTGGAGAGCTTTGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
||
| CDS-3UTR GCA 90 bp | CGGAGTGTTTGTTCAGGGTCCCATTTCGGGGCCTTGTGCGAGTGGTCCCCTTCCAGCCACCAGGTCCTCTaGCACCTGGTCTTGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSVCSGSHFGALCEWSPSSHQVL*HLVLAP Trigger: TGGGGCCAAGACCAGGTGGCAGAGGACCTGGTGGCT...GGAAGGGGACCACTCGCACAAGGCCCCGAAATGGGACCCTGAACAAACACTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153557.2 |
||
| 3UTR CAA 72 bp | AGCCCCGTTAGCCACCAGGTCCTCTGCCACCTGGTCTaGGCCCCAGAAACATGCATAGTGAAGTGGCACATT | + |
|
Preference number: 4 (lower is better) Translates to: SPVSHQVLCHLV*APETCIVKWHI Trigger: AATGTGCCACTTCACTATGCATGTTTCTGGGGCCAAGACCAGGTGGCAGAGGACCTGGTGGCTAACGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
||
| 3UTR CAA 72 bp | GCACCGCGAAACTCCACATGTCTGCTGAGCGTCTGTTaGTGTCTTCAGGCTTCTTCTGCAGGGCTTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: APRNSTCLLSVC*CLQASSAGLQG Trigger: CCCCTGAAGCCCTGCAGAAGAAGCCTGAAGACACAAACAGACGCTCAGCAGACATGTGGAGTTTCGCGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGGAGGCAACCAGAGGTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCCATATGTCACGGTGTCCATaGCTAGCTGCCAGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGRQPEVFNFGEVYSPSHMSRCP*LAARCR Trigger: CCTGCACCTGGCAGCTAGTCATGGACACCGTGACAT...ATGGCTGGGGGAGTACACTTCTCCAAAGTTAAAGACCTCTGGTTGCCTCCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGGAGCACGTTAGGGTGTaGGAAAATCCTGAGCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TVVGMGAGNKSHNWGSTMEHVRV*ENPEPG Trigger: CCCCGGCTCAGGATTTTCTCACACCCTAACGTGCTC...CATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | CTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAGCCACCAGGTCCTCTaGCACCTGGTCTTGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LWRSVLPQPCFDTSGVWASHQVL*HLVLAP Trigger: TGGGGCCAAGACCAGGTGGCAGAGGACCTGGTGGCT...TGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGGAGGCAACCAGAGGTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCCATGGGGCCTTGTGCGAGTaGTCCCCTTCCAGAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGRQPEVFNFGEVYSPSHGALCE*SPSRMC Trigger: ACACATTCTGGAAGGGGACCACTCGCACAAGGCCCC...ATGGCTGGGGGAGTACACTTCTCCAAAGTTAAAGACCTCTGGTTGCCTCCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CCA 90 bp | AGACAGGGGAGGCAACCAGAGGTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCGGGGCCTTGTGCGAGTaGTCCCCTTCCAGAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RQGRQPEVFNFGEVYSPSGALCE*SPSRMC Trigger: ACACATTCTGGAAGGGGACCACTCGCACAAGGCCCC...GCTGGGGGAGTACACTTCTCCAAAGTTAAAGACCTCTGGTTGCCTCCCCTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAGGACCGGGGGAAATACCTGGTaGGATGGTAGGCCGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSVLPQPCFDTSGVWARTGGNTW*DGRPKA Trigger: GGCCTTCGGCCTACCATCCCACCAGGTATTTCCCCC...GGTCCTTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGCGGCTATTGAGTGCATaGCGGGGTATGAGAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVVGMGAGNKSHNWGSTMRLLSA*RGMRGS Trigger: AGAGCCTCTCATACCCCGGCATGCACTCAATAGCCG...CATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR TCA 90 bp | GTTTGTGGGTGTTACGAAGGGAGAAACAAAAAGGGTGGGGATCACCTCTCCAGAATGTCACGGTGTCCATaGCTAGCTGCCAGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCGCYEGRNKKGGDHLSRMSRCP*LAARCR Trigger: CCTGCACCTGGCAGCTAGTCATGGACACCGTGACAT...TCTGGAGAGGTGATCCCCACCCTTTTTGTTTCTCCCTTCGTAACACCCACAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| CDS-3UTR TCA 90 bp | GGGTCCCATTTCGGGGCCTTGTGCGAGTGGTCCCCTTCCAGAATGTGTCCTTGTGCTCATTCACTGCATTaGTGTCAGCCTTGTATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSHFGALCEWSPSRMCPCAHSLH*CQPCIA Trigger: TGCAATACAAGGCTGACATCAATGCAGTGAATGAGC...ACAAGGACACATTCTGGAAGGGGACCACTCGCACAAGGCCCCGAAATGGGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000149695.8 ENSMUST00000153557.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTTTGTTCAGGGTCCCATTTCGGGGCCTTGTGCGAGTGGTCCCCTTCCAGAAGTGGCACATTGCCGTaGTCATTCACTGCATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SVCSGSHFGALCEWSPSRSGTLP*SFTALM Trigger: CATCAATGCAGTGAATGAGCACGGCAATGTGCCACT...TCTGGAAGGGGACCACTCGCACAAGGCCCCGAAATGGGACCCTGAACAAACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000149695.8 ENSMUST00000153557.2 |
||
| CDS-3UTR GCA 90 bp | GTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGAGCCACCAGGTCCTCTaGCACCTGGTCTTGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VFNFGEVYSPSHVLTLLESHQVL*HLVLAP Trigger: TGGGGCCAAGACCAGGTGGCAGAGGACCTGGTGGCT...CTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTTAAAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | AGACAGGGGAGGCAACCAGAGGTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCAAGCTCTCTAAGGGGTaGCTTGGCTTTGTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RQGRQPEVFNFGEVYSPSKLSKG*LGFVHR Trigger: CCTGTGGACAAAGCCAAGGCACCCCTTAGAGAGCTT...GCTGGGGGAGTACACTTCTCCAAAGTTAAAGACCTCTGGTTGCCTCCCCTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | GTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGATTCGGCTATTGAGTGCATaGCGGGGTATGAGAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVGMGAGNKSHNWGSTMIRLLSA*RGMRGS Trigger: AGAGCCTCTCATACCCCGGCATGCACTCAATAGCCG...AATCATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | GTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGATTCCGAAGGCCTTCCAGTaGCACCTTCATCCCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VVGMGAGNKSHNWGSTMIPKAFQ*HLHPNL Trigger: GAGATTGGGATGAAGGTGGCACTGGAAGGCCTTCGG...AATCATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | CATGTTGGGAGACATCATGTGGCAAGTGACAAAGCTCTGAGCCCAGCCCCTTTTCCGAAGGCCTTCCAGTaGCACCTTCATCCCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: HVGRHHVASDKALSPAPFPKAFQ*HLHPNL Trigger: GAGATTGGGATGAAGGTGGCACTGGAAGGCCTTCGG...AAAAGGGGCTGGGCTCAGAGCTTTGTCACTTGCCACATGATGTCTCCCAACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CCA 90 bp | GCTACAGTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGAGCTTACACACATaGGGGGAAATACCTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATVVGMGAGNKSHNWGSTMSLHT*GEIPGG Trigger: CCCACCAGGTATTTCCCCCCATGTGTGTAAGCTCAT...GGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCACTGTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR TCA 90 bp | AACTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGATGTCACGGTGTCCATaGCTAGCTGCCAGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NFGEVYSPSHVLTLLEFGMSRCP*LAARCR Trigger: CCTGCACCTGGCAGCTAGTCATGGACACCGTGACAT...CCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
||
| CDS-3UTR TCA 90 bp | AACTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGGAGCACGTTAGGGTGTaGGAAAATCCTGAGCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NFGEVYSPSHVLTLLEFGEHVRV*ENPEPG Trigger: CCCCGGCTCAGGATTTTCTCACACCCTAACGTGCTC...CCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | GTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGATTAAGCTCTCTAAGGGGTaGCTTGGCTTTGTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVGMGAGNKSHNWGSTMIKLSKG*LGFVHR Trigger: CCTGTGGACAAAGCCAAGGCACCCCTTAGAGAGCTT...AATCATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | AGACAGGGGAGGCAACCAGAGGTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCTCACAACAATATCATTaGCCTGCCAGCGGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RQGRQPEVFNFGEVYSPSSQQYH*PASGLS Trigger: GGAAAGGCCGCTGGCAGGGCAATGATATTGTTGTGA...GCTGGGGGAGTACACTTCTCCAAAGTTAAAGACCTCTGGTTGCCTCCCCTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGTCACAACAATATCATTaGCCTGCCAGCGGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVVGMGAGNKSHNWGSTMSQQYH*PASGLS Trigger: GGAAAGGCCGCTGGCAGGGCAATGATATTGTTGTGA...CATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | CAGTCTCGAACCTTCAGCACCTTCACAACAATATCATTGCCCTGCCAGCGGCCTGGATTGATGGTTCCGTaGTCGGTTTGCTTCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: QSRTFSTFTTISLPCQRPGLMVP*SVCFPF Trigger: GAATGGGAAGCAAACCGAGCACGGAACCATCAATCC...AGGCCGCTGGCAGGGCAATGATATTGTTGTGAAGGTGCTGAAGGTTCGAGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGGGGGGAAATACCTGGTaGGATGGTAGGCCGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VFNFGEVYSPSHVLTLLEGGNTW*DGRPKA Trigger: GGCCTTCGGCCTACCATCCCACCAGGTATTTCCCCC...CTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTTAAAGAC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CCA 90 bp | AGACAGGGGAGGCAACCAGAGGTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCATGAGCTTACACACATaGGGGGAAATACCTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RQGRQPEVFNFGEVYSPSMSLHT*GEIPGG Trigger: CCCACCAGGTATTTCCCCCCATGTGTGTAAGCTCAT...GCTGGGGGAGTACACTTCTCCAAAGTTAAAGACCTCTGGTTGCCTCCCCTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR TCA 90 bp | GGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGATTAGAGACAGGGGAGGGGACATTCCTCATTaGAGTCCCTGCTTTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GAGNKSHNWGSTMIRDRGGDIPH*SPCFSL Trigger: CAAGGAAAAGCAGGGACTTCAATGAGGAATGTCCCC...TCCCCTGTCTCTAATCATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR TCA 90 bp | AACTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGGTGCATGCCGGGGTATaGGAGGCTCTAGTGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NFGEVYSPSHVLTLLEFGVHAGV*EALVCE Trigger: TTCACACACTAGAGCCTCTCATACCCCGGCATGCAC...CCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR TCA 90 bp | GTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGATTACTCCACATGTCTGCTaGGCGTCTGTTTGTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVGMGAGNKSHNWGSTMITPHVC*ASVCVF Trigger: GAAGACACAAACAGACGCTCAGCAGACATGTGGAGT...AATCATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | GGGGAAATACCTGGTGGGATGGTAGGCCGAAGGCCTTCCAGTGCCACCTTCATCCAACATCCTTACTGGTaGCTTCATGTAGAACATTGT | + |
|
Preference number: 4 (lower is better) Translates to: GEIPGGMVGRRPSSATFIQHPYW*LHVEHC Trigger: ACAATGTTCTACATGAAGGCACCAGTAAGGATGTTG...GATGAAGGTGGCACTGGAAGGCCTTCGGCCTACCATCCCACCAGGTATTTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130565.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCGGGGCCTTGTGCGAGTGGTCCCCTTCCAGAATGTGTCCTTGTATGGAATGCCTTAATTGTGCTGTaGAGGGAGGAGATGCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ISGPCASGPLPECVLVWNALIVL*REEMQG Trigger: ACCTTGCATCTCCTCCCTCCACAGCACAATTAAGGC...ATTCCATACAAGGACACATTCTGGAAGGGGACCACTCGCACAAGGCCCCGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000149695.8 ENSMUST00000153557.2 |
||
| 3UTR CAA 72 bp | GTCCCCTTCCAGAATGTGTCCTTGTATGGAATACGGTaGAGATTCTGGCCCATTTTCTCTGCCCGTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VPFQNVSLYGIR*RFWPIFSARSR Trigger: CCGAGAACGGGCAGAGAAAATGGGCCAGAATCTCAACCGTATTCCATACAAGGACACATTCTGGAAGGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
||
| 3UTR CAA 72 bp | GGCCTTGTGCGAGTGGTCCCCTTCCAGAATGTGTCCTaGTATGGAATACGGTTGAGATTCTGGCCCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLVRVVPFQNVS*YGIRLRFWPIF Trigger: GAAAATGGGCCAGAATCTCAACCGTATTCCATACAAGGACACATTCTGGAAGGGGACCACTCGCACAAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000127298.4 ENSMUST00000149695.8 ENSMUST00000153557.2 |
||
| 3UTR CAA 72 bp | CAGTCTCGAACCTTCAGCACCTTCACAACAATATCATaGCCCTGCCAGCGGCCTTTCCAAAGCTCTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QSRTFSTFTTIS*PCQRPFQSSPE Trigger: TTCTGGAGAGCTTTGGAAAGGCCGCTGGCAGGGCAATGATATTGTTGTGAAGGTGCTGAAGGTTCGAGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
||
| CDS-3UTR TCA 90 bp | AGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAGGACCAGAGGCTCTAGTGTGTaGAGAAAAGCCATGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSVLPQPCFDTSGVWARTRGSSV*RKAMPL Trigger: AAGAGGCATGGCTTTTCTTCACACACTAGAGCCTCT...GGTCCTTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR TCA 90 bp | GTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGGTGCATGCCGGGGTATaGGAGGCTCTAGTGTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VFNFGEVYSPSHVLTLLEVHAGV*EALVCE Trigger: TTCACACACTAGAGCCTCTCATACCCCGGCATGCAC...CTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTTAAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | GTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGATTAGTGGCACATTGCCGTaGTCATTCACTGCATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VVGMGAGNKSHNWGSTMISGTLP*SFTALM Trigger: CATCAATGCAGTGAATGAGCACGGCAATGTGCCACT...AATCATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | TCTCGAACCTTCAGCACCTTCACAACAATATCATTGCCCTGCCAGCGGCCTTTCAGTGGCACATTGCCGTaGTCATTCACTGCATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SRTFSTFTTISLPCQRPFSGTLP*SFTALM Trigger: CATCAATGCAGTGAATGAGCACGGCAATGTGCCACT...GAAAGGCCGCTGGCAGGGCAATGATATTGTTGTGAAGGTGCTGAAGGTTCGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| CDS-3UTR GCA 90 bp | GAATGTGTCCTTGTATGGAATACGGTTGAGATTCTGGCCCATTTTCTCTGCCCGAAGCTCTCTAAGGGGTaGCTTGGCTTTGTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ECVLVWNTVEILAHFLCPKLSKG*LGFVHR Trigger: CCTGTGGACAAAGCCAAGGCACCCCTTAGAGAGCTT...CGGGCAGAGAAAATGGGCCAGAATCTCAACCGTATTCCATACAAGGACACATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000149695.8 ENSMUST00000153557.2 |
||
| CDS-3UTR GCA 90 bp | CTGATTCGGGCAGTCATATCTTCATCGATCATTACACTGCGGCTATTGAGTGCACTGAGTACTTACCTCTaGCACCTGGTCTTGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LIRAVISSSIITLRLLSALSTYL*HLVLAP Trigger: TGGGGCCAAGACCAGGTGGCAGAGGTAAGTACTCAG...TGCACTCAATAGCCGCAGTGTAATGATCGATGAAGATATGACTGCCCGAATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGTGTCCCACCTGAGCCGGGGACATTCCTCATTGAAGTCCCTGCTTTTCCTACATGCATAGTGAAGTaGCACATTGCCGTGCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: FSVPPEPGTFLIEVPAFPTCIVK*HIAVLI Trigger: AATGAGCACGGCAATGTGCCACTTCACTATGCATGT...AGGAAAAGCAGGGACTTCAATGAGGAATGTCCCCGGCTCAGGTGGGACACTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAGGACCATACGGTTGAGATTCTaGCCCATTTTCTCTGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RSVLPQPCFDTSGVWARTIRLRF*PIFSAR Trigger: ACGGGCAGAGAAAATGGGCCAGAATCTCAACCGTAT...GGTCCTTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAGGATACGGTTGAGATTCTaGCCCATTTTCTCTGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: WRSVLPQPCFDTSGVWARIRLRF*PIFSAR Trigger: ACGGGCAGAGAAAATGGGCCAGAATCTCAACCGTAT...CCTTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| 3UTR CAA 72 bp | AGAAAGTTGAGCTGTTTGAAGTCAATACCGGAGTGTTaGTTCAGGGTCCCATTTCGGGGCCTTGTGCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKLSCLKSIPEC*FRVPFRGLVRV Trigger: CACTCGCACAAGGCCCCGAAATGGGACCCTGAACAAACACTCCGGTATTGACTTCAAACAGCTCAACTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127298.4 ENSMUST00000149695.8 |
||
| 3UTR CAA 72 bp | GCAGTCATATCTTCATCGATCATTACACTGCGGCTATaGAGTGCATGCCGGGGTATGAGAGGCTCTAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AVISSSIITLRL*SACRGMRGSSV Trigger: CACACTAGAGCCTCTCATACCCCGGCATGCACTCAATAGCCGCAGTGTAATGATCGATGAAGATATGACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130565.8 ENSMUST00000149695.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGTGTATGGAATACGGTTaGGATTCTGGCCCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVVGMGAGNKSHNWGSTMCMEYG*DSGPFS Trigger: AGAAAATGGGCCAGAATCTCAACCGTATTCCATACA...CATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGAAAAGCCATGCCTCTTaGCATGTCCAAAGCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: TVVGMGAGNKSHNWGSTMKSHAS*HVQSKL Trigger: AAGTTTGCTTTGGACATGGCAAGAGGCATGGCTTTT...CATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAGGACCACATGCATAGTGAAGTaGCACATTGCCGTGCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: RSVLPQPCFDTSGVWARTTCIVK*HIAVLI Trigger: AATGAGCACGGCAATGTGCCACTTCACTATGCATGT...GGTCCTTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAGGACCGTAGAGAGATCCATATaGCATCCAGTGTGTGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSVLPQPCFDTSGVWARTVERSI*HPVCDE Trigger: CTCATCACACACTGGATGCCATATGGATCTCTCTAC...GGTCCTTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000130565.8 ENSMUST00000163389.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAGGGCAAACTTTACAGCTTaGCTCTGGTCCACAACGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WRSVLPQPCFDTSGVWARANFTA*LWSTTK Trigger: TTTCGTTGTGGACCAGAGCCAAGCTGTAAAGTTTGC...CCTTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAGGCAATCATGTCAAACTTaGGTCGCTTTGCAGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WRSVLPQPCFDTSGVWARQSCQT*VALQGL Trigger: AAGACCCTGCAAAGCGACCCAAGTTTGACATGATTG...CCTTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CCA 90 bp | GTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGATTCAATCATGTCAAACTTaGGTCGCTTTGCAGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VVGMGAGNKSHNWGSTMIQSCQT*VALQGL Trigger: AAGACCCTGCAAAGCGACCCAAGTTTGACATGATTG...AATCATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR TCA 90 bp | ATAATAAACTTTATTGTGACAGGCGGGGCTGATCCCTCCCATGTTGGGAGACATGGGGACATTCCTCATTaGAGTCCCTGCTTTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IINFIVTGGADPSHVGRHGDIPH*SPCFSL Trigger: CAAGGAAAAGCAGGGACTTCAATGAGGAATGTCCCC...ATGTCTCCCAACATGGGAGGGATCAGCCCCGCCTGTCACAATAAAGTTTATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR TCA 90 bp | ATAATAAACTTTATTGTGACAGGCGGGGCTGATCCCTCCCATGTTGGGAGACATACTCCACATGTCTGCTaGGCGTCTGTTTGTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IINFIVTGGADPSHVGRHTPHVC*ASVCVF Trigger: GAAGACACAAACAGACGCTCAGCAGACATGTGGAGT...ATGTCTCCCAACATGGGAGGGATCAGCCCCGCCTGTCACAATAAAGTTTATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | AACTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGAGTGGCACATTGCCGTaGTCATTCACTGCATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: NFGEVYSPSHVLTLLEFGSGTLP*SFTALM Trigger: CATCAATGCAGTGAATGAGCACGGCAATGTGCCACT...CCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGAAGAAAAGCCATGCCTCTTGCCATGTCCAAAGCAAACTTTACAGCTTAAGCTCTCTAAGGGGTaGCTTGGCTTTGTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCEEKPCLLPCPKQTLQLKLSKG*LGFVHR Trigger: CCTGTGGACAAAGCCAAGGCACCCCTTAGAGAGCTT...AAGCTGTAAAGTTTGCTTTGGACATGGCAAGAGGCATGGCTTTTCTTCACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGGAGGCAACCAGAGGTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCCATCCACAACGAAATTGGTaGCTTCATGTAGAACATTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGRQPEVFNFGEVYSPSHPQRNW*LHVEHC Trigger: ACAATGTTCTACATGAAGGCACCAATTTCGTTGTGG...ATGGCTGGGGGAGTACACTTCTCCAAAGTTAAAGACCTCTGGTTGCCTCCCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CCA 90 bp | CTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAGTAGAGAGATCCATATaGCATCCAGTGTGTGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LWRSVLPQPCFDTSGVWAVERSI*HPVCDE Trigger: CTCATCACACACTGGATGCCATATGGATCTCTCTAC...TGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000130565.8 ENSMUST00000163389.9 |
||
| CDS-3UTR CCA 90 bp | CCGCGAAACTCCACATGTCTGCTGAGCGTCTGTTTGTGTCTTCAGGCTTCTTCTATTCATCATAGGACTTaGGGTCTGAGTACTTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRNSTCLLSVCLCLQASSIHHRT*GLSTYL Trigger: GAGGTAAGTACTCAGACCCCAAGTCCTATGATGAAT...AGAAGAAGCCTGAAGACACAAACAGACGCTCAGCAGACATGTGGAGTTTCGCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCAAGATAGGCACAATCATGTCAAACTTGGGTCGCTTTGCAGGGTCTTCAGCCTTAATTGTGCTGTaGAGGGAGGAGATGCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSKIGTIMSNLGRFAGSSALIVL*REEMQG Trigger: ACCTTGCATCTCCTCCCTCCACAGCACAATTAAGGC...TGAAGACCCTGCAAAGCGACCCAAGTTTGACATGATTGTGCCTATCTTGGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| CDS-3UTR TCA 90 bp | ATAATAAACTTTATTGTGACAGGCGGGGCTGATCCCTCCCATGTTGGGAGACATAGAGGCTCTAGTGTGTaGAGAAAAGCCATGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IINFIVTGGADPSHVGRHRGSSV*RKAMPL Trigger: AAGAGGCATGGCTTTTCTTCACACACTAGAGCCTCT...ATGTCTCCCAACATGGGAGGGATCAGCCCCGCCTGTCACAATAAAGTTTATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | ATAATAAACTTTATTGTGACAGGCGGGGCTGATCCCTCCCATGTTGGGAGACATAGTGAAGTGGCACATTaGCGTGCTCATTCACTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IINFIVTGGADPSHVGRHSEVAH*RAHSLH Trigger: ATGCAGTGAATGAGCACGGCAATGTGCCACTTCACT...ATGTCTCCCAACATGGGAGGGATCAGCCCCGCCTGTCACAATAAAGTTTATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGGAGGCAACCAGAGGTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCCATATTCTCATTGAGCTTTaGCAGAAAGTTGAGCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGRQPEVFNFGEVYSPSHILIEL*QKVELF Trigger: AAACAGCTCAACTTTCTGGCAAAGCTCAATGAGAAT...ATGGCTGGGGGAGTACACTTCTCCAAAGTTAAAGACCTCTGGTTGCCTCCCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | AACTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGAAACTTGGGTCGCTTTaGAGGGTCTTCATTCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: NFGEVYSPSHVLTLLEFGKLGSL*RVFIHA Trigger: TGCATGAATGAAGACCCTGCAAAGCGACCCAAGTTT...CCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CCA 90 bp | TGTGCGAGTGGTCCCCTTCCAGAATGTGTCCTTGTATGGAATACGGTTGAGATTACATGCATAGTGAAGTaGCACATTGCCGTGCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: CASGPLPECVLVWNTVEITCIVK*HIAVLI Trigger: AATGAGCACGGCAATGTGCCACTTCACTATGCATGT...AATCTCAACCGTATTCCATACAAGGACACATTCTGGAAGGGGACCACTCGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149695.8 ENSMUST00000153557.2 |
||
| CDS-3UTR CCA 90 bp | TTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAGTAGAGAGATCCATATaGCATCCAGTGTGTGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: FGEVYSPSHVLTLLEFGQVERSI*HPVCDE Trigger: CTCATCACACACTGGATGCCATATGGATCTCTCTAC...TTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000130565.8 ENSMUST00000163389.9 |
||
| CDS-3UTR TCA 90 bp | GTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGGCTCATTCACTGCATTaGTGTCAGCCTTGTATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFNFGEVYSPSHVLTLLEAHSLH*CQPCIA Trigger: TGCAATACAAGGCTGACATCAATGCAGTGAATGAGC...CTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTTAAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | GTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGAAACTTGGGTCGCTTTaGAGGGTCTTCATTCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFNFGEVYSPSHVLTLLEKLGSL*RVFIHA Trigger: TGCATGAATGAAGACCCTGCAAAGCGACCCAAGTTT...CTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTTAAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CCA 90 bp | ATAATAAACTTTATTGTGACAGGCGGGGCTGATCCCTCCCATGTTGGGAGACATGCAAACTTTACAGCTTaGCTCTGGTCCACAACGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IINFIVTGGADPSHVGRHANFTA*LWSTTK Trigger: TTTCGTTGTGGACCAGAGCCAAGCTGTAAAGTTTGC...ATGTCTCCCAACATGGGAGGGATCAGCCCCGCCTGTCACAATAAAGTTTATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CCA 90 bp | CCAGGGCACTGGAAAGAAAACTTAACATCAGCCATGCTGATTCGGGCAGTCATAGACCAACATCCTTACTaGTGCCTTCATGTAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: PGHWKENLTSAMLIRAVIDQHPY*CLHVEH Trigger: ATGTTCTACATGAAGGCACCAGTAAGGATGTTGGTC...TATGACTGCCCGAATCAGCATGGCTGATGTTAAGTTTTCTTTCCAGTGCCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130565.8 |
||
| 3UTR CAA 72 bp | TTGGCTCTGGTCCACAACGAAATTTTTCAGTACTACTaGGGGTGCCTTGGACACAACAGCTTCCAATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LALVHNEIFQYY*GCLGHNSFQFS Trigger: ACTGAATTGGAAGCTGTTGTGTCCAAGGCACCCCAAGTAGTACTGAAAAATTTCGTTGTGGACCAGAGCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
||
| CDS-3UTR TCA 90 bp | CCAGGGCACTGGAAAGAAAACTTAACATCAGCCATGCTGATTCGGGCAGTCATAAGTCACAAACAAGCATaGACACAGATGCAGTACATA | + |
|
Preference number: 4 (lower is better) Translates to: PGHWKENLTSAMLIRAVISHKQA*TQMQYI Trigger: TATGTACTGCATCTGTGTTCATGCTTGTTTGTGACT...TATGACTGCCCGAATCAGCATGGCTGATGTTAAGTTTTCTTTCCAGTGCCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| CDS-3UTR GCA 90 bp | ATAATAAACTTTATTGTGACAGGCGGGGCTGATCCCTCCCATGTTGGGAGACATAAAAGCCATGCCTCTTaGCATGTCCAAAGCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: IINFIVTGGADPSHVGRHKSHAS*HVQSKL Trigger: AAGTTTGCTTTGGACATGGCAAGAGGCATGGCTTTT...ATGTCTCCCAACATGGGAGGGATCAGCCCCGCCTGTCACAATAAAGTTTATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CCA 90 bp | TTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAGAATGTGTCCTTGTATaGAATACGGTTGAGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FGEVYSPSHVLTLLEFGQECVLV*NTVEIL Trigger: CAGAATCTCAACCGTATTCCATACAAGGACACATTC...TTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| 3UTR CAA 72 bp | CATGCCTCTTGCCATGTCCAAAGCAAACTTTACAGCTaGGCTCTGGTCCACAACGAAATTTTTCAGTACTAC | + |
|
Preference number: 4 (lower is better) Translates to: HASCHVQSKLYS*ALVHNEIFQYY Trigger: GTAGTACTGAAAAATTTCGTTGTGGACCAGAGCCAAGCTGTAAAGTTTGCTTTGGACATGGCAAGAGGCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127298.4 |
||
| CDS-3UTR TCA 90 bp | CTGGAAAGAAAACTTAACATCAGCCATGCTGATTCGGGCAGTCATATCTTCATCTTAGCCACCAGGTCCTaGAAAGAAAATTGTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LERKLNISHADSGSHIFILATRS*KENCSG Trigger: CCCTGAACAATTTTCTTTTCAGGACCTGGTGGCTAA...GATGAAGATATGACTGCCCGAATCAGCATGGCTGATGTTAAGTTTTCTTTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| CDS-3UTR GCA 90 bp | ATAATAAACTTTATTGTGACAGGCGGGGCTGATCCCTCCCATGTTGGGAGACATCCACAACGAAATTGGTaGCTTCATGTAGAACATTGT | + |
|
Preference number: 4 (lower is better) Translates to: IINFIVTGGADPSHVGRHPQRNW*LHVEHC Trigger: ACAATGTTCTACATGAAGGCACCAATTTCGTTGTGG...ATGTCTCCCAACATGGGAGGGATCAGCCCCGCCTGTCACAATAAAGTTTATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CCA 90 bp | GTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGGAATGTGTCCTTGTATaGAATACGGTTGAGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFNFGEVYSPSHVLTLLEECVLV*NTVEIL Trigger: CAGAATCTCAACCGTATTCCATACAAGGACACATTC...CTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTTAAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR GCA 90 bp | GTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGATTCTCATTGAGCTTTaGCAGAAAGTTGAGCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFNFGEVYSPSHVLTLLEILIEL*QKVELF Trigger: AAACAGCTCAACTTTCTGGCAAAGCTCAATGAGAAT...CTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTTAAAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CAA 90 bp | TTCAGGGTCCCATTTCGGGGCCTTGTGCGAGTGGTCCCCTTCCAGAATGTGTCCTCTCTAAGGGGTGCCTaGGCTTTGTCCACAGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: FRVPFRGLVRVVPFQNVSSLRGA*ALSTGI Trigger: GATGCCTGTGGACAAAGCCAAGGCACCCCTTAGAGA...GGACACATTCTGGAAGGGGACCACTCGCACAAGGCCCCGAAATGGGACCCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000149695.8 ENSMUST00000153557.2 |
||
| CDS-3UTR CAA 90 bp | TTGTTCAGGGTCCCATTTCGGGGCCTTGTGCGAGTGGTCCCCTTCCAGAATGTGTCTCTAAGGGGTGCCTaGGCTTTGTCCACAGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LFRVPFRGLVRVVPFQNVSLRGA*ALSTGI Trigger: GATGCCTGTGGACAAAGCCAAGGCACCCCTTAGAGA...CACATTCTGGAAGGGGACCACTCGCACAAGGCCCCGAAATGGGACCCTGAACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000149695.8 ENSMUST00000153557.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTTCAGGGTCCCATTTCGGGGCCTTGTGCGAGTGGTCCCCTTCCAGAATGTCTCTGCCACCTGGTCTaGGCCCCAGAAACATGCATA | + |
|
Preference number: 5 (lower is better) Translates to: FVQGPISGPCASGPLPECLCHLV*APETCI Trigger: TATGCATGTTTCTGGGGCCAAGACCAGGTGGCAGAG...ACATTCTGGAAGGGGACCACTCGCACAAGGCCCCGAAATGGGACCCTGAACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000149695.8 ENSMUST00000153557.2 |
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| CDS-3UTR CAA 90 bp | CATGTTGGGAGACATCATGTGGCAAGTGACAAAGCTCTGAGCCCAGCCCCTTTTAGGTCGTTCTCTGTGTaGTCCAGCCACAAGCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: HVGRHHVASDKALSPAPFRSFSV*SSHKRT Trigger: GGTGCGCTTGTGGCTGGACAACACAGAGAACGACCT...AAAAGGGGCTGGGCTCAGAGCTTTGTCACTTGCCACATGATGTCTCCCAACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
||
| CDS-3UTR CAA 90 bp | AGGGGCCACCCAGGCAGGCGCATACATGCGCCCAGGGCACTGGAAAGAAAACTTTGCTCATTCACTGCATaGATGTCAGCCTTGTATTGC | + |
|
Preference number: 5 (lower is better) Translates to: RGHPGRRIHAPRALERKLCSFTA*MSALYC Trigger: GCAATACAAGGCTGACATCAATGCAGTGAATGAGCA...AAGTTTTCTTTCCAGTGCCCTGGGCGCATGTATGCGCCTGCCTGGGTGGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| CDS-3UTR CAA 90 bp | ACAGTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGTCTCTAAGGGGTGCCTaGGCTTTGTCCACAGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: TVVGMGAGNKSHNWGSTMSLRGA*ALSTGI Trigger: GATGCCTGTGGACAAAGCCAAGGCACCCCTTAGAGA...CATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
||
| CDS-3UTR CAA 90 bp | TTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAATCCCATTTCGGGGCCTaGTGCGAGTGGTCCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FGEVYSPSHVLTLLEFGQSHFGA*CEWSPS Trigger: GGAAGGGGACCACTCGCACAAGGCCCCGAAATGGGA...TTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
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| CDS GCA 90 bp | GTTAGCCACCAGGTCCTCTGCCACCTGGTCTTGGCCCCAGAAACATaGATAGTGAAGTGGCACATTGCCGTGCTCATTCACTGCATTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VSHQVLCHLVLAPET*IVKWHIAVLIHCID Trigger: ATCAATGCAGTGAATGAGCACGGCAATGTGCCACTTCACTATGCATGTTTCTGGGGCCAAGACCAGGTGGCAGAGGACCTGGTGGCTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033182.10 ENSMUST00000136687.9 ENSMUST00000153557.2 ENSMUST00000163389.9 |
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| CDS-3UTR CAA 90 bp | AGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAGGACCTCTCTAAGGGGTGCCTaGGCTTTGTCCACAGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: RSVLPQPCFDTSGVWARTSLRGA*ALSTGI Trigger: GATGCCTGTGGACAAAGCCAAGGCACCCCTTAGAGA...GGTCCTTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
||
| CDS CCA 90 bp | ATTGATGGTTCCGTGCTCGGTTTGCTTCCCATTCATCATAGGACTTaGGGTCTGAGTACTTACCTCTGCCACCTGGTCTTGGCCCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: IDGSVLGLLPIHHRT*GLSTYLCHLVLAPE Trigger: TTCTGGGGCCAAGACCAGGTGGCAGAGGTAAGTACTCAGACCCCAAGTCCTATGATGAATGGGAAGCAAACCGAGCACGGAACCATCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAAGGTCGTTCTCTGTGTaGTCCAGCCACAAGCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: FGEVYSPSHVLTLLEFGQRSFSV*SSHKRT Trigger: GGTGCGCTTGTGGCTGGACAACACAGAGAACGACCT...TTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
||
| CDS-3UTR CAA 90 bp | CAGGGGAGGCAACCAGAGGTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCCATTTCACAACAATATCATaGCCCTGCCAGCGGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QGRQPEVFNFGEVYSPSHFTTIS*PCQRPF Trigger: GAAAGGCCGCTGGCAGGGCAATGATATTGTTGTGAA...ATGGCTGGGGGAGTACACTTCTCCAAAGTTAAAGACCTCTGGTTGCCTCCCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CAA 90 bp | AGACAGGGGAGGCAACCAGAGGTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCCGGGGACATTCCTCATaGAAGTCCCTGCTTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RQGRQPEVFNFGEVYSPSRGHSS*KSLLFL Trigger: AAGGAAAAGCAGGGACTTCAATGAGGAATGTCCCCG...GCTGGGGGAGTACACTTCTCCAAAGTTAAAGACCTCTGGTTGCCTCCCCTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CAA 90 bp | GCTACAGTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCGAAAAGCCATGCCTCTaGCCATGTCCAAAGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: ATVVGMGAGNKSHNWGSTEKPCL*PCPKQT Trigger: AGTTTGCTTTGGACATGGCAAGAGGCATGGCTTTTC...GGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCACTGTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS GCA 90 bp | GGTCTGAGTACTTACCTCTGCCACCTGGTCTTGGCCCCAGAAACATaGATAGTGAAGTGGCACATTGCCGTGCTCATTCACTGCATTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLSTYLCHLVLAPET*IVKWHIAVLIHCID Trigger: ATCAATGCAGTGAATGAGCACGGCAATGTGCCACTTCACTATGCATGTTTCTGGGGCCAAGACCAGGTGGCAGAGGTAAGTACTCAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| CDS GCA 90 bp | TTGCTTCCCATTCATCATAGGACTTGGGGTCTGAGTACTTACCTCTaGCACCTGGTCTTGGCCCCAGAAACATGCATAGTGAAGTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLPIHHRTWGLSTYL*HLVLAPETCIVKWH Trigger: GTGCCACTTCACTATGCATGTTTCTGGGGCCAAGACCAGGTGGCAGAGGTAAGTACTCAGACCCCAAGTCCTATGATGAATGGGAAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| CDS-3UTR CAA 90 bp | CTGATTCGGGCAGTCATATCTTCATCGATCATTACACTGCGGCTATTGAGTGCAAGGTCGTTCTCTGTGTaGTCCAGCCACAAGCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: LIRAVISSSIITLRLLSARSFSV*SSHKRT Trigger: GGTGCGCTTGTGGCTGGACAACACAGAGAACGACCT...TGCACTCAATAGCCGCAGTGTAATGATCGATGAAGATATGACTGCCCGAATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAACTCTGCCACCTGGTCTaGGCCCCAGAAACATGCATA | + |
|
Preference number: 5 (lower is better) Translates to: FGEVYSPSHVLTLLEFGQLCHLV*APETCI Trigger: TATGCATGTTTCTGGGGCCAAGACCAGGTGGCAGAG...TTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
||
| CDS-3UTR CAA 90 bp | GTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGATTTTCACAACAATATCATaGCCCTGCCAGCGGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VVGMGAGNKSHNWGSTMIFTTIS*PCQRPF Trigger: GAAAGGCCGCTGGCAGGGCAATGATATTGTTGTGAA...AATCATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CAA 90 bp | CATGTTGGGAGACATCATGTGGCAAGTGACAAAGCTCTGAGCCCAGCCCCTTTTCTGCTGAGCGTCTGTTaGTGTCTTCAGGCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HVGRHHVASDKALSPAPFLLSVC*CLQASS Trigger: AGAAGAAGCCTGAAGACACAAACAGACGCTCAGCAG...AAAAGGGGCTGGGCTCAGAGCTTTGTCACTTGCCACATGATGTCTCCCAACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
||
| CDS-3UTR CAA 90 bp | ACAGTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGACAATCATGTCAAACTaGGGTCGCTTTGCAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TVVGMGAGNKSHNWGSTMTIMSN*GRFAGS Trigger: AGACCCTGCAAAGCGACCCAAGTTTGACATGATTGT...CATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
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| CDS-3UTR CAA 90 bp | CTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCACTGCTGAGCGTCTGTTaGTGTCTTCAGGCTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: LWRSVLPQPCFDTSGVWALLSVC*CLQASS Trigger: AGAAGAAGCCTGAAGACACAAACAGACGCTCAGCAG...TGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
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| CDS-3UTR CAA 90 bp | TGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAGGACAATCATGTCAAACTaGGGTCGCTTTGCAGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: WRSVLPQPCFDTSGVWARTIMSN*GRFAGS Trigger: AGACCCTGCAAAGCGACCCAAGTTTGACATGATTGT...CCTTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
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| CDS-3UTR CAA 90 bp | AGACAGGGGAGGCAACCAGAGGTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCGATGTCAGCCTTGTATaGCAACAGCTTCTGTACAAT | + |
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Preference number: 5 (lower is better) Translates to: RQGRQPEVFNFGEVYSPSDVSLV*QQLLYN Trigger: ATTGTACAGAAGCTGTTGCAATACAAGGCTGACATC...GCTGGGGGAGTACACTTCTCCAAAGTTAAAGACCTCTGGTTGCCTCCCCTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
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| CDS-3UTR CAA 90 bp | GTGGTAGGGATGGGAGCAGGGAACAAGTCCCATAACTGGGGTAGTACCATGATTTGCTCATTCACTGCATaGATGTCAGCCTTGTATTGC | + |
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Preference number: 5 (lower is better) Translates to: VVGMGAGNKSHNWGSTMICSFTA*MSALYC Trigger: GCAATACAAGGCTGACATCAATGCAGTGAATGAGCA...AATCATGGTACTACCCCAGTTATGGGACTTGTTCCCTGCTCCCATCCCTACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
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| CDS-3UTR CAA 90 bp | AGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAGGACCTGCTCATTCACTGCATaGATGTCAGCCTTGTATTGC | + |
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Preference number: 5 (lower is better) Translates to: RSVLPQPCFDTSGVWARTCSFTA*MSALYC Trigger: GCAATACAAGGCTGACATCAATGCAGTGAATGAGCA...GGTCCTTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033182.10 ENSMUST00000149695.8 ENSMUST00000163389.9 |
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| CDS-3UTR CAA 90 bp | GTGTGTGAAGAAAAGCCATGCCTCTTGCCATGTCCAAAGCAAACTTTACAGCTTCTCTGCCACCTGGTCTaGGCCCCAGAAACATGCATA | + |
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Preference number: 5 (lower is better) Translates to: VCEEKPCLLPCPKQTLQLLCHLV*APETCI Trigger: TATGCATGTTTCTGGGGCCAAGACCAGGTGGCAGAG...AAGCTGTAAAGTTTGCTTTGGACATGGCAAGAGGCATGGCTTTTCTTCACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
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| CDS-3UTR CAA 90 bp | CAGGGGAGGCAACCAGAGGTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCCATTTCCAGAATGTGTCCTaGTATGGAATACGGTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: QGRQPEVFNFGEVYSPSHFQNVS*YGIRLR Trigger: TCTCAACCGTATTCCATACAAGGACACATTCTGGAA...ATGGCTGGGGGAGTACACTTCTCCAAAGTTAAAGACCTCTGGTTGCCTCCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
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| CDS-3UTR CAA 90 bp | AGTGGTCCCCTTCCAGAATGTGTCCTTGTATGGAATACGGTTGAGATTCTGGCCTGCTCATTCACTGCATaGATGTCAGCCTTGTATTGC | + |
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Preference number: 5 (lower is better) Translates to: SGPLPECVLVWNTVEILACSFTA*MSALYC Trigger: GCAATACAAGGCTGACATCAATGCAGTGAATGAGCA...GGCCAGAATCTCAACCGTATTCCATACAAGGACACATTCTGGAAGGGGACCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149695.8 ENSMUST00000153557.2 |
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| CDS-3UTR CAA 90 bp | TGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAGGTTGTATGGAATACGGTaGAGATTCTGGCCCATTTTC | + |
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Preference number: 5 (lower is better) Translates to: WRSVLPQPCFDTSGVWARLYGIR*RFWPIF Trigger: GAAAATGGGCCAGAATCTCAACCGTATTCCATACAA...CCTTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
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| CDS-3UTR CAA 90 bp | ATAATAAACTTTATTGTGACAGGCGGGGCTGATCCCTCCCATGTTGGGAGACATCGGGGACATTCCTCATaGAAGTCCCTGCTTTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: IINFIVTGGADPSHVGRHRGHSS*KSLLFL Trigger: AAGGAAAAGCAGGGACTTCAATGAGGAATGTCCCCG...ATGTCTCCCAACATGGGAGGGATCAGCCCCGCCTGTCACAATAAAGTTTATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
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| CDS-3UTR CAA 90 bp | TTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAAGCAAACTTTACAGCTaGGCTCTGGTCCACAACGAA | + |
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Preference number: 5 (lower is better) Translates to: FGEVYSPSHVLTLLEFGQSKLYS*ALVHNE Trigger: TTCGTTGTGGACCAGAGCCAAGCTGTAAAGTTTGCT...TTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
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| CDS-3UTR CAA 90 bp | GGTCCCCTTCCAGAATGTGTCCTTGTATGGAATACGGTTGAGATTCTGGCCCATGATGTCAGCCTTGTATaGCAACAGCTTCTGTACAAT | + |
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Preference number: 5 (lower is better) Translates to: GPLPECVLVWNTVEILAHDVSLV*QQLLYN Trigger: ATTGTACAGAAGCTGTTGCAATACAAGGCTGACATC...ATGGGCCAGAATCTCAACCGTATTCCATACAAGGACACATTCTGGAAGGGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127298.4 ENSMUST00000149695.8 |
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| CDS-3UTR CAA 90 bp | GTCTTTAACTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGGAAAAGCCATGCCTCTaGCCATGTCCAAAGCAAACT | + |
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Preference number: 5 (lower is better) Translates to: VFNFGEVYSPSHVLTLLEEKPCL*PCPKQT Trigger: AGTTTGCTTTGGACATGGCAAGAGGCATGGCTTTTC...CTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTTAAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
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| CDS TCA 90 bp | AACATGCATAGTGAAGTGGCACATTGCCGTGCTCATTCACTGCATTaGTGTCAGCCTTGTATTGCAACAGCTTCTGTACAATGTCACGGT | + |
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Preference number: 5 (lower is better) Translates to: NMHSEVAHCRAHSLH*CQPCIATASVQCHG Trigger: ACCGTGACATTGTACAGAAGCTGTTGCAATACAAGGCTGACATCAATGCAGTGAATGAGCACGGCAATGTGCCACTTCACTATGCATGTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033182.10 ENSMUST00000136687.9 ENSMUST00000149695.8 ENSMUST00000163389.9 |
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| CDS CCA 90 bp | AGAAAAGCCATGCCTCTTGCCATGTCCAAAGCAAACTTTACAGCTTaGCTCTGGTCCACAACGAAATTGGTGCCTTCATGTAGAACATTG | + |
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Preference number: 5 (lower is better) Translates to: RKAMPLAMSKANFTA*LWSTTKLVPSCRTL Trigger: CAATGTTCTACATGAAGGCACCAATTTCGTTGTGGACCAGAGCCAAGCTGTAAAGTTTGCTTTGGACATGGCAAGAGGCATGGCTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
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| CDS-3UTR CAA 90 bp | AACTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGTTCCAGAATGTGTCCTaGTATGGAATACGGTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: NFGEVYSPSHVLTLLEFGFQNVS*YGIRLR Trigger: TCTCAACCGTATTCCATACAAGGACACATTCTGGAA...CCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
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| CDS-3UTR CAA 90 bp | CTTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAGCTTTGCCAGAAAGTaGAGCTGTTTGAAGTCAATA | + |
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Preference number: 5 (lower is better) Translates to: LWRSVLPQPCFDTSGVWASFARK*SCLKSI Trigger: TATTGACTTCAAACAGCTCAACTTTCTGGCAAAGCT...TGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
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| CDS-3UTR CAA 90 bp | ATAATAAACTTTATTGTGACAGGCGGGGCTGATCCCTCCCATGTTGGGAGACATTTGTATGGAATACGGTaGAGATTCTGGCCCATTTTC | + |
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Preference number: 5 (lower is better) Translates to: IINFIVTGGADPSHVGRHLYGIR*RFWPIF Trigger: GAAAATGGGCCAGAATCTCAACCGTATTCCATACAA...ATGTCTCCCAACATGGGAGGGATCAGCCCCGCCTGTCACAATAAAGTTTATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
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| CDS-3UTR CAA 90 bp | TTTGGAGAAGTGTACTCCCCCAGCCATGTTTTGACACTTCTGGAGTTTGGGCAAAGCTTTGCCAGAAAGTaGAGCTGTTTGAAGTCAATA | + |
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Preference number: 5 (lower is better) Translates to: FGEVYSPSHVLTLLEFGQSFARK*SCLKSI Trigger: TATTGACTTCAAACAGCTCAACTTTCTGGCAAAGCT...TTGCCCAAACTCCAGAAGTGTCAAAACATGGCTGGGGGAGTACACTTCTCCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
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| CDS TCA 72 bp | TCGGTTTGCTTCCCATTCATCATAGGACTTGGGGTCTaGGTACTTACCTCTGCCACCTGGTCTTGGCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SVCFPFIIGLGV*VLTSATWSWPQ Trigger: CTGGGGCCAAGACCAGGTGGCAGAGGTAAGTACTCAGACCCCAAGTCCTATGATGAATGGGAAGCAAACCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
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| CDS CAA 90 bp | CATCATAGGACTTGGGGTCTGAGTACTTACCTCTGCCACCTGGTCTaGGCCCCAGAAACATGCATAGTGAAGTGGCACATTGCCGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: HHRTWGLSTYLCHLV*APETCIVKWHIAVL Trigger: GAGCACGGCAATGTGCCACTTCACTATGCATGTTTCTGGGGCCAAGACCAGGTGGCAGAGGTAAGTACTCAGACCCCAAGTCCTATGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
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| CDS CCA 72 bp | TCCGTGCTCGGTTTGCTTCCCATTCATCATAGGACTTaGGGTCTGAGTACTTACCTCTGCCACCTGGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SVLGLLPIHHRT*GLSTYLCHLVL Trigger: CAAGACCAGGTGGCAGAGGTAAGTACTCAGACCCCAAGTCCTATGATGAATGGGAAGCAAACCGAGCACGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
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| CDS GCA 72 bp | GGGGGTATCATCCCCACGATTCATCACATTAATCCGTaGTCCACGCATGATCAGCATTTCAACCACCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GGIIPTIHHINP*STHDQHFNHRR Trigger: TCTGCGGTGGTTGAAATGCTGATCATGCGTGGAGCACGGATTAATGTGATGAATCGTGGGGATGATACCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033182.10 ENSMUST00000136687.9 ENSMUST00000149695.8 ENSMUST00000163389.9 |
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| CDS CAA 72 bp | ACTTGGGGTCTGAGTACTTACCTCTGCCACCTGGTCTaGGCCCCAGAAACATGCATAGTGAAGTGGCACATT | + |
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Preference number: 6 (lower is better) Translates to: TWGLSTYLCHLV*APETCIVKWHI Trigger: AATGTGCCACTTCACTATGCATGTTTCTGGGGCCAAGACCAGGTGGCAGAGGTAAGTACTCAGACCCCAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
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| CDS GCA 72 bp | ATTCATCATAGGACTTGGGGTCTGAGTACTTACCTCTaGCACCTGGTCTTGGCCCCAGAAACATGCATAGTG | + |
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Preference number: 6 (lower is better) Translates to: IHHRTWGLSTYL*HLVLAPETCIV Trigger: CACTATGCATGTTTCTGGGGCCAAGACCAGGTGGCAGAGGTAAGTACTCAGACCCCAAGTCCTATGATGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
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| CDS CAA 90 bp | CAAACAGTAGGGCTGACAGAATGGATTGATGGTTCCGTGCTCGGTTaGCTTCCCATTCATCATAGGACTTGGGGTCTGAGTACTTACCTC | + |
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Preference number: 6 (lower is better) Translates to: QTVGLTEWIDGSVLG*LPIHHRTWGLSTYL Trigger: GAGGTAAGTACTCAGACCCCAAGTCCTATGATGAATGGGAAGCAAACCGAGCACGGAACCATCAATCCATTCTGTCAGCCCTACTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149695.8 |
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| CDS CAA 72 bp | CATGCCTCTTGCCATGTCCAAAGCAAACTTTACAGCTaGGCTCTGGTCCACAACGAAATTGGTGCCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: HASCHVQSKLYS*ALVHNEIGAFM Trigger: CATGAAGGCACCAATTTCGTTGTGGACCAGAGCCAAGCTGTAAAGTTTGCTTTGGACATGGCAAGAGGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
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| CDS CCA 72 bp | ATGCCTCTTGCCATGTCCAAAGCAAACTTTACAGCTTaGCTCTGGTCCACAACGAAATTGGTGCCTTCATGT | + |
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Preference number: 6 (lower is better) Translates to: MPLAMSKANFTA*LWSTTKLVPSC Trigger: ACATGAAGGCACCAATTTCGTTGTGGACCAGAGCCAAGCTGTAAAGTTTGCTTTGGACATGGCAAGAGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
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| CDS TCA 72 bp | AGTGAAGTGGCACATTGCCGTGCTCATTCACTGCATTaGTGTCAGCCTTGTATTGCAACAGCTTCTGTACAA | + |
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Preference number: 6 (lower is better) Translates to: SEVAHCRAHSLH*CQPCIATASVQ Trigger: TTGTACAGAAGCTGTTGCAATACAAGGCTGACATCAATGCAGTGAATGAGCACGGCAATGTGCCACTTCACT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033182.10 ENSMUST00000136687.9 ENSMUST00000149695.8 ENSMUST00000163389.9 |
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| CDS CCA 72 bp | CTTGCCATGTCCAAAGCAAACTTTACAGCTTGGCTCTaGTCCACAACGAAATTGGTGCCTTCATGTAGAACA | + |
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Preference number: 6 (lower is better) Translates to: LAMSKANFTAWL*STTKLVPSCRT Trigger: TGTTCTACATGAAGGCACCAATTTCGTTGTGGACCAGAGCCAAGCTGTAAAGTTTGCTTTGGACATGGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033182.10 ENSMUST00000163389.9 |
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