Pregenerated sensors for IL9R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020279Ensembl transcript IDs: ENSMUST00000020518.11, ENSMUST00000128311.8, ENSMUST00000142396.2, ENSMUST00000145401.8
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGCACATGCTCTGAGCCTGGGAGCCCTGGGAAGCCCGGGGCTGTaGCCTCCCACTTCAGGCAGGCAAACTGCACAGGGCATGCCGGGC | + |
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Preference number: 1 (lower is better) Translates to: AAHALSLGALGSPGL*PPTSGRQTAQGMPG Trigger: GCCCGGCATGCCCTGTGCAGTTTGCCTGCCTGAAGTGGGAGGCCACAGCCCCGGGCTTCCCAGGGCTCCCAGGCTCAGAGCATGTGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| 3UTR GCA 90 bp | CGGGGCTGTGGCCTCCCACTTCAGGCAGGCAAACTGCACAGGGCATaGCGGGCTATAGGTGAGTGTGGCGACGGCCTCCCAGATGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: RGCGLPLQAGKLHRA*RAIGECGDGLPDAG Trigger: TCCAGCATCTGGGAGGCCGTCGCCACACTCACCTATAGCCCGGCATGCCCTGTGCAGTTTGCCTGCCTGAAGTGGGAGGCCACAGCCCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| 3UTR GCA 90 bp | AGAGGTGGCATTCCTCACAGCAGTCCAACATGCAATAGTCGCTGCTaGCGCTGTCTGAGTCTGGAGGAGGGGGCCTGGCAGAGCCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: RGGIPHSSPTCNSRC*RCLSLEEGAWQSPV Trigger: CACTGGGCTCTGCCAGGCCCCCTCCTCCAGACTCAGACAGCGGCAGCAGCGACTATTGCATGTTGGACTGCTGTGAGGAATGCCACCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| 3UTR GCA 90 bp | CTGAGAGGTGGCATTCCTCACAGCAGTCCAACATGCAATAGTCGCTaGTGCCGCTGTCTGAGTCTGGAGGAGGGGGCCTGGCAGAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: LRGGIPHSSPTCNSR*CRCLSLEEGAWQSP Trigger: TGGGCTCTGCCAGGCCCCCTCCTCCAGACTCAGACAGCGGCAGCAGCGACTATTGCATGTTGGACTGCTGTGAGGAATGCCACCTCTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| 3UTR GCA 90 bp | GATTCTCTTCAGCTGGGCACAACTACAAGGATGCTGGCTGACCATTaGCAGCGTGGGACCAGGAGGCCCTGTCTCCTCTGGGGAGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: DSLQLGTTTRMLADH*QRGTRRPCLLWGEG Trigger: TCCTTCTCCCCAGAGGAGACAGGGCCTCCTGGTCCCACGCTGGCAATGGTCAGCCAGCATCCTTGTAGTTGTGCCCAGCTGAAGAGAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| 3UTR TCA 90 bp | GGTAAAAGATTCTCTTCAGCTGGGCACAACTACAAGGATGCTGGCTaGCCATTGCCAGCGTGGGACCAGGAGGCCCTGTCTCCTCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: GKRFSSAGHNYKDAG*PLPAWDQEALSPLG Trigger: CCCCAGAGGAGACAGGGCCTCCTGGTCCCACGCTGGCAATGGTCAGCCAGCATCCTTGTAGTTGTGCCCAGCTGAAGAGAATCTTTTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| 3UTR GCA 90 bp | CTCAACTTTTGGTTGAGATGTGAGCTCTCAGCTTCCTGTCCTCACTaGCATGTGTGCCGCTGGCTGCCATGTCTCCACACCTCTGGAACC | + |
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Preference number: 1 (lower is better) Translates to: LNFWLRCELSASCPH*HVCRWLPCLHTSGT Trigger: GGTTCCAGAGGTGTGGAGACATGGCAGCCAGCGGCACACATGGCAGTGAGGACAGGAAGCTGAGAGCTCACATCTCAACCAAAAGTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR CCA 90 bp | AGATGTGAGCTCTCAGCTTCCTGTCCTCACTGCCATGTGTGCCGCTaGCTGCCATGTCTCCACACCTCTGGAACCTTAAACCAAGCCAAC | + |
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Preference number: 1 (lower is better) Translates to: RCELSASCPHCHVCR*LPCLHTSGTLNQAN Trigger: GTTGGCTTGGTTTAAGGTTCCAGAGGTGTGGAGACATGGCAGCCAGCGGCACACATGGCAGTGAGGACAGGAAGCTGAGAGCTCACATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR CCA 90 bp | AGCAGGGCTGGAAACAAACCCTTCCCTCCAGGAGCATGGCCTTCCTaGTGTCTCCATTCCAGACCCATGGACCTCAGAGCAGAGAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: SRAGNKPFPPGAWPS*CLHSRPMDLRAERK Trigger: TTTTCTCTCTGCTCTGAGGTCCATGGGTCTGGAATGGAGACACCAGGAAGGCCATGCTCCTGGAGGGAAGGGTTTGTTTCCAGCCCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR GCA 90 bp | CTGCTCAGCCTGTTTTGGCCTTCTAGGTCACAATCTCTGCTCACATaGAAGAGTATGAGACACAACCTGTCCCCGTCATTGGGTAGCATC | + |
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Preference number: 1 (lower is better) Translates to: LLSLFWPSRSQSLLT*KSMRHNLSPSLGSI Trigger: GATGCTACCCAATGACGGGGACAGGTTGTGTCTCATACTCTTGCATGTGAGCAGAGATTGTGACCTAGAAGGCCAAAACAGGCTGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR GCA 90 bp | CCTTTAAGAGCCCTTCAAGGAGCAAGAGGACTTCTGTTAGGCCAGTaGTTTATGGCTCCAAATCTGCACAAACGTGGCCAACTGCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: PLRALQGARGLLLGQ*FMAPNLHKRGQLLS Trigger: GCTGAGCAGTTGGCCACGTTTGTGCAGATTTGGAGCCATAAAGCACTGGCCTAACAGAAGTCCTCTTGCTCCTTGAAGGGCTCTTAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR CCA 90 bp | ATGGCTCCAAATCTGCACAAACGTGGCCAACTGCTCAGCCTGTTTTaGCCTTCTAGGTCACAATCTCTGCTCACATGCAAGAGTATGAGA | + |
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Preference number: 1 (lower is better) Translates to: MAPNLHKRGQLLSLF*PSRSQSLLTCKSMR Trigger: TCTCATACTCTTGCATGTGAGCAGAGATTGTGACCTAGAAGGCCAAAACAGGCTGAGCAGTTGGCCACGTTTGTGCAGATTTGGAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR TCA 90 bp | TGTTTTGGCCTTCTAGGTCACAATCTCTGCTCACATGCAAGAGTATaGGACACAACCTGTCCCCGTCATTGGGTAGCATCTAGTCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: CFGLLGHNLCSHARV*DTTCPRHWVASSLS Trigger: ACTGAGACTAGATGCTACCCAATGACGGGGACAGGTTGTGTCTCATACTCTTGCATGTGAGCAGAGATTGTGACCTAGAAGGCCAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR TCA 90 bp | ATGCCATTCTCACACAGATCTTTACAGCCAAAGGAGACTCATCTCTaGGAATGTGTCATCTGTATATGCAGAGACCGGATGGCGGATCCC | + |
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Preference number: 1 (lower is better) Translates to: MPFSHRSLQPKETHL*ECVICICRDRMADP Trigger: GGGATCCGCCATCCGGTCTCTGCATATACAGATGACACATTCTCAGAGATGAGTCTCCTTTGGCTGTAAAGATCTGTGTGAGAATGGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
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| 3UTR TCA 90 bp | ATTATGCAGAAAAATCACCTCCAAGACGATCTGATTGTGTCCATCTaGGGCTTCTCATCCTTACCCTTAGACACTGGAAGAAAATGCCAT | + |
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Preference number: 1 (lower is better) Translates to: IMQKNHLQDDLIVSI*GFSSLPLDTGRKCH Trigger: ATGGCATTTTCTTCCAGTGTCTAAGGGTAAGGATGAGAAGCCTCAGATGGACACAATCAGATCGTCTTGGAGGTGATTTTTCTGCATAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
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| 3UTR CCA 90 bp | AGACTCATCTCTGAGAATGTGTCATCTGTATATGCAGAGACCGGATaGCGGATCCCAAAATGCTTTATTCAGACTTTGTACATTTTCATT | + |
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Preference number: 1 (lower is better) Translates to: RLISENVSSVYAETG*RIPKCFIQTLYIFI Trigger: AATGAAAATGTACAAAGTCTGAATAAAGCATTTTGGGATCCGCCATCCGGTCTCTGCATATACAGATGACACATTCTCAGAGATGAGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
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| 3UTR GCA 90 bp | TTACTCTTTACTTGTATTCACACCTACACAACACACAAACCTTGGTaGTGTTTTACGTTGACTGATTTATACTGTGTAGCAGTAAAACCT | + |
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Preference number: 1 (lower is better) Translates to: LLFTCIHTYTTHKPW*CFTLTDLYCVAVKP Trigger: AGGTTTTACTGCTACACAGTATAAATCAGTCAACGTAAAACAGCACCAAGGTTTGTGTGTTGTGTAGGTGTGAATACAAGTAAAGAGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGGACACCAGCTCTGAGCTCACAATGCTGCATGCAGTTCCTCTCTGCGCTCTGGAGGAGGGGGCCTaGCAGAGCCCAGTGGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: SQDTSSELTMLHAVPLCALEEGA*QSPVGP Trigger: GGGCCCCACTGGGCTCTGCCAGGCCCCCTCCTCCAG...AGCGCAGAGAGGAACTGCATGCAGCATTGTGAGCTCAGAGCTGGTGTCCTGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| 3UTR-3UTR CCA 90 bp | AAAGCTCCATCATTCCCTCCGTACCCAGCCACCCACAGCCTGCAGTCAAAAGCGCCTGGCAGAGCCCAGTaGGGCCCAGTCCTCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: KAPSFPPYPATHSLQSKAPGRAQ*GPVLLG Trigger: CCCCAGGAGGACTGGGCCCCACTGGGCTCTGCCAGG...CGCTTTTGACTGCAGGCTGTGGGTGGCTGGGTACGGAGGGAATGATGGAGCTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCTGTCCTCACTGCCATGTGTGCCGCTGGCTGCCATGTCTCCACACCTCTCTCTCCAAAGTCATCTaGACACGCAGCCTGGCCTCG | + |
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Preference number: 2 (lower is better) Translates to: ASCPHCHVCRWLPCLHTSLSKVI*TRSLAS Trigger: CGAGGCCAGGCTGCGTGTCCAGATGACTTTGGAGAG...AGAGGTGTGGAGACATGGCAGCCAGCGGCACACATGGCAGTGAGGACAGGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| 3UTR-3UTR CCA 90 bp | TCTGCGCTCCATGGACTCTGCGCTCCATGGACCCTGCGCAGTAGTTCGACCGTCTTCCCTCCAGGAGCATaGCCTTCCTGGTGTCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: SALHGLCAPWTLRSSSTVFPPGA*PSWCLH Trigger: ATGGAGACACCAGGAAGGCCATGCTCCTGGAGGGAA...GACGGTCGAACTACTGCGCAGGGTCCATGGAGCGCAGAGTCCATGGAGCGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCCTCTGATCCGTGCACAGCTGCCTCCTCTCCGGAGTTCCACACGCACCCCAGCACAACTACAAGGATaGTGGCTGACCATTGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LPLIRAQLPPLRSSTRTPAQLQG*WLTIAS Trigger: GCTGGCAATGGTCAGCCAGCATCCTTGTAGTTGTGC...TGGGGTGCGTGTGGAACTCCGGAGAGGAGGCAGCTGTGCACGGATCAGAGGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| 3UTR-3UTR CCA 90 bp | CACAATGCTGCATGCAGTTCCTCTCTGCGCTCCATGGACTCTGCGCTCCATGGAACCCCAGGGTCAGCCTaGGGCCTTTCGTTCATCTCC | + |
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Preference number: 2 (lower is better) Translates to: HNAACSSSLRSMDSALHGTPGSA*GLSFIS Trigger: GGAGATGAACGAAAGGCCCCAGGCTGACCCTGGGGT...TCCATGGAGCGCAGAGTCCATGGAGCGCAGAGAGGAACTGCATGCAGCATTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCAGCCTGTTTTGGCCTTCTAGGTCACAATCTCTGCTCACATGCAAGAGTGCTGCTGCCGCTGTCTaGGTCTGGAGGAGGGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LLSLFWPSRSQSLLTCKSAAAAV*VWRRGP Trigger: AGGCCCCCTCCTCCAGACTCAGACAGCGGCAGCAGC...ACTCTTGCATGTGAGCAGAGATTGTGACCTAGAAGGCCAAAACAGGCTGAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| 3UTR-3UTR TCA 90 bp | CATGTGTGCCGCTGGCTGCCATGTCTCCACACCTCTGGAACCTTAAACCAAGCCCGGATGTTAAGATGCTaGCCCTGGAGGCATCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: HVCRWLPCLHTSGTLNQARMLRC*PWRHPH Trigger: GTGGGGATGCCTCCAGGGTCAGCATCTTAACATCCG...GGCTTGGTTTAAGGTTCCAGAGGTGTGGAGACATGGCAGCCAGCGGCACACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGCGCTCCATGGACTCTGCGCTCCATGGACCCTGCGCAGTAGTTCGACCGTCCTTTTGGTTGAGATGTaGGCTCTCAGCTTCCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: SALHGLCAPWTLRSSSTVLLVEM*ALSFLS Trigger: GGACAGGAAGCTGAGAGCTCACATCTCAACCAAAAG...GACGGTCGAACTACTGCGCAGGGTCCATGGAGCGCAGAGTCCATGGAGCGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGCTCTGAGCTCACAATGCTGCATGCAGTTCCTCTCTGCGCTCCATGGACTCCAGCCACCCACAGCCTaGAGTCAAAAGCGTCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: PALSSQCCMQFLSALHGLQPPTA*SQKRPF Trigger: GAAGGGACGCTTTTGACTGCAGGCTGTGGGTGGCTG...GAGTCCATGGAGCGCAGAGAGGAACTGCATGCAGCATTGTGAGCTCAGAGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCCTGGTGTCTCCATTCCAGACCCATGGACCTCAGAGCAGAGAGAAAACAGGTGTCAGGCCCTGCTaGACACAGGAAGGGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: AFLVSPFQTHGPQSREKTGVRPC*TQEGPQ Trigger: CTGTGGCCCTTCCTGTGTCCAGCAGGGCCTGACACC...TGTTTTCTCTCTGCTCTGAGGTCCATGGGTCTGGAATGGAGACACCAGGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| 3UTR-3UTR GCA 90 bp | GAAAAGGGACACTTCACCAATGTTGTCTCATCAGTGTCCCTGGGCCCAGGCCAGATTGCCTCTGATCCGTaGACAGCTGCCTCCTCTCCG | + |
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Preference number: 2 (lower is better) Translates to: EKGHFTNVVSSVSLGPGQIASDP*TAASSP Trigger: CGGAGAGGAGGCAGCTGTGCACGGATCAGAGGCAAT...CTGGCCTGGGCCCAGGGACACTGATGAGACAACATTGGTGAAGTGTCCCTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCACGCTTGCCCTTTAAGAGCCCTTCAAGGAGCAAGAGGACTTCTGTTAGGCGTGTCCTGGGAAGGCTaGGAGGTGGCATTCCTCACA | + |
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Preference number: 2 (lower is better) Translates to: SHACPLRALQGARGLLLGVSWEG*EVAFLT Trigger: TGTGAGGAATGCCACCTCTCAGCCTTCCCAGGACAC...GCCTAACAGAAGTCCTCTTGCTCCTTGAAGGGCTCTTAAAGGGCAAGCGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| 3UTR-3UTR GCA 90 bp | GAAAAGGGACACTTCACCAATGTTGTCTCATCAGTGTCCCTGGGCCCAGGCCAGACGATACGGTCCTTGTaGCGGGCCTGCAATGACTCT | + |
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Preference number: 2 (lower is better) Translates to: EKGHFTNVVSSVSLGPGQTIRSL*RACNDS Trigger: AGAGTCATTGCAGGCCCGGCACAAGGACCGTATCGT...CTGGCCTGGGCCCAGGGACACTGATGAGACAACATTGGTGAAGTGTCCCTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTGCCATGTCTCCACACCTCTGGAACCTTAAACCAAGCCAACTCTTCCTTCGGCCTCCCAGATGCTaGACTCTGAGCCTGCTGATG | + |
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Preference number: 2 (lower is better) Translates to: LAAMSPHLWNLKPSQLFLRPPRC*TLSLLM Trigger: CATCAGCAGGCTCAGAGTCCAGCATCTGGGAGGCCG...AAGGAAGAGTTGGCTTGGTTTAAGGTTCCAGAGGTGTGGAGACATGGCAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| 3UTR-3UTR TCA 90 bp | AAGCTCAAAGATGGACAACCCCACCTGCTCAAAGCTCCATCATTCCCTCCGTACCGGATGTTAAGATGCTaGCCCTGGAGGCATCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: KLKDGQPHLLKAPSFPPYRMLRC*PWRHPH Trigger: GTGGGGATGCCTCCAGGGTCAGCATCTTAACATCCG...GTACGGAGGGAATGATGGAGCTTTGAGCAGGTGGGGTTGTCCATCTTTGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR-3UTR GCA 90 bp | GAAAAGGGACACTTCACCAATGTTGTCTCATCAGTGTCCCTGGGCCCAGGCCAGAAACTGCACAGGGCATaGCGGGCTATAGGTGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: EKGHFTNVVSSVSLGPGQKLHRA*RAIGEC Trigger: ACACTCACCTATAGCCCGGCATGCCCTGTGCAGTTT...CTGGCCTGGGCCCAGGGACACTGATGAGACAACATTGGTGAAGTGTCCCTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGGACACCAGCTCTGAGCTCACAATGCTGCATGCAGTTCCTCTCTGCGCTACAAACGTGGCCAACTaGTCAGCCTGTTTTGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: SQDTSSELTMLHAVPLCATNVAN*SACFGL Trigger: AAGGCCAAAACAGGCTGAGCAGTTGGCCACGTTTGT...AGCGCAGAGAGGAACTGCATGCAGCATTGTGAGCTCAGAGCTGGTGTCCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCACAATGCTGCATGCAGTTCCTCTCTGCGCTCCATGGACTCTGCGCTCCATCTGCTCAGCCTGTTTTaGCCTTCTAGGTCACAATCT | + |
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Preference number: 2 (lower is better) Translates to: AHNAACSSSLRSMDSALHLLSLF*PSRSQS Trigger: AGATTGTGACCTAGAAGGCCAAAACAGGCTGAGCAG...ATGGAGCGCAGAGTCCATGGAGCGCAGAGAGGAACTGCATGCAGCATTGTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCTTCCTGGTGTCTCCATTCCAGACCCATGGACCTCAGAGCAGAGAGAAAACGTGAAGTGGTTTGAATaGGAAATGTCCCCCACAGAC | + |
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Preference number: 2 (lower is better) Translates to: GLPGVSIPDPWTSEQRENVKWFE*EMSPTD Trigger: GTCTGTGGGGGACATTTCTCATTCAAACCACTTCAC...GTTTTCTCTCTGCTCTGAGGTCCATGGGTCTGGAATGGAGACACCAGGAAGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTGCCATGTCTCCACACCTCTGGAACCTTAAACCAAGCCAACTCTTCCTTGCCTGGCCTCGTAGATaGAACCAGGATTCAGTTCGA | + |
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Preference number: 2 (lower is better) Translates to: LAAMSPHLWNLKPSQLFLAWPRR*NQDSVR Trigger: TCGAACTGAATCCTGGTTCCATCTACGAGGCCAGGC...AAGGAAGAGTTGGCTTGGTTTAAGGTTCCAGAGGTGTGGAGACATGGCAGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| 3UTR-3UTR TCA 90 bp | CTCAGAGGGGAATGTGAAGCAGGGCTGGAAACAAACCCTTCCCTCCAGGAGCATCTGCTGATGAAGTACTaGCACCATTCTGTCTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: LRGECEAGLETNPSLQEHLLMKY*HHSVLL Trigger: AAGCAAGACAGAATGGTGTCAGTACTTCATCAGCAG...ATGCTCCTGGAGGGAAGGGTTTGTTTCCAGCCCTGCTTCACATTCCCCTCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| 3UTR CAA 90 bp | GTCACAGGCTTGGAAATAGTCCTCACACTAGCATTGTTCCCACGCTaGCCCTTTAAGAGCCCTTCAAGGAGCAAGAGGACTTCTGTTAGG | + |
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Preference number: 2 (lower is better) Translates to: VTGLEIVLTLALFPR*PFKSPSRSKRTSVR Trigger: CCTAACAGAAGTCCTCTTGCTCCTTGAAGGGCTCTTAAAGGGCAAGCGTGGGAACAATGCTAGTGTGAGGACTATTTCCAAGCCTGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR-3UTR TCA 90 bp | GAACACTTGGTCTCTATTTGGCCGAGCTGTTTAGGGAGGCATGGAACCTTCAGGCACTCAACTTTTGGTTaGGATGTGAGCTCTCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: EHLVSIWPSCLGRHGTFRHSTFG*DVSSQL Trigger: AAGCTGAGAGCTCACATCTCAACCAAAAGTTGAGTG...CCTGAAGGTTCCATGCCTCCCTAAACAGCTCGGCCAAATAGAGACCAAGTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTCCTGGTGTCTCCATTCCAGACCCATGGACCTCAGAGCAGAGAGAAAACAGATATTTGAACACTTaGTCTCTATTTGGCCGAGCT | + |
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Preference number: 2 (lower is better) Translates to: GLPGVSIPDPWTSEQRENRYLNT*SLFGRA Trigger: AGCTCGGCCAAATAGAGACCAAGTGTTCAAATATCT...GTTTTCTCTCTGCTCTGAGGTCCATGGGTCTGGAATGGAGACACCAGGAAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR-3UTR TCA 90 bp | AAACAAACCCTTCCCTCCAGGAGCATGGCCTTCCTGGTGTCTCCATTCCAGACCACAGACTCAGATATTTaGACACTTGGTCTCTATTTG | + |
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Preference number: 2 (lower is better) Translates to: KQTLPSRSMAFLVSPFQTTDSDI*TLGLYL Trigger: CAAATAGAGACCAAGTGTTCAAATATCTGAGTCTGT...GGTCTGGAATGGAGACACCAGGAAGGCCATGCTCCTGGAGGGAAGGGTTTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCACAGGCTTGGAAATAGTCCTCACACTAGCATTGTTCCCACGCTTGCCCTTAGTTCACTCAACTTTTaGTTGAGATGTGAGCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: CHRLGNSPHTSIVPTLALSSLNF*LRCELS Trigger: TGAGAGCTCACATCTCAACCAAAAGTTGAGTGAACT...AAGGGCAAGCGTGGGAACAATGCTAGTGTGAGGACTATTTCCAAGCCTGTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| 3UTR-3UTR CCA 90 bp | GGACTGCCTAGTAACCACTGCCTAGGGTTAGTGCTATGTTTTGAAATATTTGCTTCCATTCCAGACCCATaGACCTCAGAGCAGAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: GLPSNHCLGLVLCFEIFASIPDP*TSEQRE Trigger: TTCTCTCTGCTCTGAGGTCCATGGGTCTGGAATGGA...AGCAAATATTTCAAAACATAGCACTAACCCTAGGCAGTGGTTACTAGGCAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| 3UTR GCA 72 bp | TGTCCTTCCAACTCCAGACACCCTGCCGGCAGCACATaGTCTGAGCCTGGGAGCCCTGGGAAGCCCGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CPSNSRHPAGST*SEPGSPGKPGA Trigger: AGCCCCGGGCTTCCCAGGGCTCCCAGGCTCAGAGCATGTGCTGCCGGCAGGGTGTCTGGAGTTGGAAGGACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
||
| 3UTR GCA 72 bp | GGCCTCCCACTTCAGGCAGGCAAACTGCACAGGGCATaGCGGGCTATAGGTGAGTGTGGCGACGGCCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GLPLQAGKLHRA*RAIGECGDGLP Trigger: TGGGAGGCCGTCGCCACACTCACCTATAGCCCGGCATGCCCTGTGCAGTTTGCCTGCCTGAAGTGGGAGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
||
| 3UTR TCA 72 bp | TGCTGGACACAGGAAGGGCCACAGGCTGAGCTAGCGTaGGCTCAGGACTCTCGGTGTGTCCTGGGAAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: CWTQEGPQAELA*AQDSRCVLGRL Trigger: CAGCCTTCCCAGGACACACCGAGAGTCCTGAGCTCACGCTAGCTCAGCCTGTGGCCCTTCCTGTGTCCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
||
| 3UTR GCA 72 bp | CAGCTGGGCACAACTACAAGGATGCTGGCTGACCATTaGCAGCGTGGGACCAGGAGGCCCTGTCTCCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QLGTTTRMLADH*QRGTRRPCLLW Trigger: CCAGAGGAGACAGGGCCTCCTGGTCCCACGCTGGCAATGGTCAGCCAGCATCCTTGTAGTTGTGCCCAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
||
| 3UTR GCA 72 bp | GGCATTCCTCACAGCAGTCCAACATGCAATAGTCGCTaGTGCCGCTGTCTGAGTCTGGAGGAGGGGGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GIPHSSPTCNSR*CRCLSLEEGAW Trigger: CCAGGCCCCCTCCTCCAGACTCAGACAGCGGCAGCAGCGACTATTGCATGTTGGACTGCTGTGAGGAATGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
||
| 3UTR GCA 72 bp | TCTCTGCGCTCCATGGACTCTGCGCTCCATGGACCCTaGGCAGTAGTTCGACCGTCTCTTGCACGGTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLRSMDSALHGP*AVVRPSLARCH Trigger: GTGACACCGTGCAAGAGACGGTCGAACTACTGCGCAGGGTCCATGGAGCGCAGAGTCCATGGAGCGCAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
||
| 3UTR GCA 72 bp | TGCTGCATGCAGTTCCTCTCTGCGCTCCATGGACTCTaGGCTCCATGGACCCTGCGCAGTAGTTCGACCGTC | + |
|
Preference number: 3 (lower is better) Translates to: CCMQFLSALHGL*APWTLRSSSTV Trigger: GACGGTCGAACTACTGCGCAGGGTCCATGGAGCGCAGAGTCCATGGAGCGCAGAGAGGAACTGCATGCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
||
| 3UTR CCA 72 bp | CAGTTCCTCTCTGCGCTCCATGGACTCTGCGCTCCATaGACCCTGCGCAGTAGTTCGACCGTCTCTTGCACG | + |
|
Preference number: 3 (lower is better) Translates to: QFLSALHGLCAP*TLRSSSTVSCT Trigger: CGTGCAAGAGACGGTCGAACTACTGCGCAGGGTCCATGGAGCGCAGAGTCCATGGAGCGCAGAGAGGAACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
||
| 3UTR GCA 72 bp | AGGATGAGCCAGGTCACTCCAACGATACGGTCCTTGTaGCGGGCCTGCAATGACTCTAGCCAGTCCCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RMSQVTPTIRSL*RACNDSSQSQE Trigger: CTCCTGGGACTGGCTAGAGTCATTGCAGGCCCGGCACAAGGACCGTATCGTTGGAGTGACCTGGCTCATCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
||
| 3UTR GCA 72 bp | ATTCCTCACAGCAGTCCAACATGCAATAGTCGCTGCTaGCGCTGTCTGAGTCTGGAGGAGGGGGCCTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: IPHSSPTCNSRC*RCLSLEEGAWQ Trigger: CTGCCAGGCCCCCTCCTCCAGACTCAGACAGCGGCAGCAGCGACTATTGCATGTTGGACTGCTGTGAGGAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
||
| 3UTR TCA 72 bp | TTCTCTTCAGCTGGGCACAACTACAAGGATGCTGGCTaGCCATTGCCAGCGTGGGACCAGGAGGCCCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: FSSAGHNYKDAG*PLPAWDQEALS Trigger: AGACAGGGCCTCCTGGTCCCACGCTGGCAATGGTCAGCCAGCATCCTTGTAGTTGTGCCCAGCTGAAGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
||
| 3UTR GCA 72 bp | TGGTTGAGATGTGAGCTCTCAGCTTCCTGTCCTCACTaGCATGTGTGCCGCTGGCTGCCATGTCTCCACACC | + |
|
Preference number: 3 (lower is better) Translates to: WLRCELSASCPH*HVCRWLPCLHT Trigger: GGTGTGGAGACATGGCAGCCAGCGGCACACATGGCAGTGAGGACAGGAAGCTGAGAGCTCACATCTCAACCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
||
| 3UTR GCA 72 bp | CTCCCAAGTGCTGGGACTAAAGGCATGCACCGCCACTaGCCGGCGAGCATTCTTGTGAGCTGTTGCTGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LPSAGTKGMHRH*PASILVSCCCC Trigger: ACAACAGCAACAGCTCACAAGAATGCTCGCCGGGCAGTGGCGGTGCATGCCTTTAGTCCCAGCACTTGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| 3UTR CCA 72 bp | AGCAGGGCTGGAAACAAACCCTTCCCTCCAGGAGCATaGCCTTCCTGGTGTCTCCATTCCAGACCCATGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SRAGNKPFPPGA*PSWCLHSRPMD Trigger: GTCCATGGGTCTGGAATGGAGACACCAGGAAGGCCATGCTCCTGGAGGGAAGGGTTTGTTTCCAGCCCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
||
| 3UTR TCA 72 bp | GCGATCACTGTTTTTAAATCTCCATCTGCCAGCAGGTaGGGCAGGGAACTGGACGGCAGGGACACTCGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: AITVFKSPSASR*GRELDGRDTRL Trigger: GAGCCGAGTGTCCCTGCCGTCCAGTTCCCTGCCTCACCTGCTGGCAGATGGAGATTTAAAAACAGTGATCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| 3UTR GCA 72 bp | CTAGGGTGTTATGCCATGGACGGTCCCGTGAGTGAATaGTTTCCCTGGGGTCAGCATTGTGAGCCTTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LGCYAMDGPVSE*FPWGQHCEPSQ Trigger: CTGGGAAGGCTCACAATGCTGACCCCAGGGAAAGCATTCACTCACGGGACCGTCCATGGCATAACACCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| 3UTR CCA 72 bp | CTCTCAGCTTCCTGTCCTCACTGCCATGTGTGCCGCTaGCTGCCATGTCTCCACACCTCTGGAACCTTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LSASCPHCHVCR*LPCLHTSGTLN Trigger: GTTTAAGGTTCCAGAGGTGTGGAGACATGGCAGCCAGCGGCACACATGGCAGTGAGGACAGGAAGCTGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
||
| 3UTR CCA 72 bp | GGAAACAAACCCTTCCCTCCAGGAGCATGGCCTTCCTaGTGTCTCCATTCCAGACCCATGGACCTCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GNKPFPPGAWPS*CLHSRPMDLRA Trigger: TGCTCTGAGGTCCATGGGTCTGGAATGGAGACACCAGGAAGGCCATGCTCCTGGAGGGAAGGGTTTGTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
||
| 3UTR CCA 72 bp | TTAAATCTCCATCTGCCAGCAGGTGAGGCAGGGAACTaGACGGCAGGGACACTCGGCTCTCTTGGTCCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LNLHLPAGEAGN*TAGTLGSLGPN Trigger: GTTAGGACCAAGAGAGCCGAGTGTCCCTGCCGTCCAGTTCCCTGCCTCACCTGCTGGCAGATGGAGATTTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| 3UTR-3UTR CAA 90 bp | CAATCTCTGCTCACATGCAAGAGTATGAGACACAACCTGTCCCCGTCATTGGGTGAATGCCCACATCCCTaGGTAGGTGTCAGGCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QSLLTCKSMRHNLSPSLGECPHP*VGVRPC Trigger: GCAGGGCCTGACACCTACCAAGGGATGTGGGCATTC...ACCCAATGACGGGGACAGGTTGTGTCTCATACTCTTGCATGTGAGCAGAGATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
||
| 3UTR TCA 72 bp | AGTCTCAGTACGCAAGAGGACACTCAGAGGGGAATGTaGAGCAGGGCTGGAAACAAACCCTTCCCTCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SLSTQEDTQRGM*SRAGNKPFPPG Trigger: TCCTGGAGGGAAGGGTTTGTTTCCAGCCCTGCTTCACATTCCCCTCTGAGTGTCCTCTTGCGTACTGAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
||
| 3UTR GCA 72 bp | GCCCTTCAAGGAGCAAGAGGACTTCTGTTAGGCCAGTaGTTTATGGCTCCAAATCTGCACAAACGTGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: ALQGARGLLLGQ*FMAPNLHKRGQ Trigger: TTGGCCACGTTTGTGCAGATTTGGAGCCATAAAGCACTGGCCTAACAGAAGTCCTCTTGCTCCTTGAAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
||
| 3UTR CCA 72 bp | GAGCATGGCCTTCCTGGTGTCTCCATTCCAGACCCATaGACCTCAGAGCAGAGAGAAAACAAATCTACGGTA | + |
|
Preference number: 3 (lower is better) Translates to: EHGLPGVSIPDP*TSEQRENKSTV Trigger: TACCGTAGATTTGTTTTCTCTCTGCTCTGAGGTCCATGGGTCTGGAATGGAGACACCAGGAAGGCCATGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
||
| 3UTR CCA 72 bp | AATCTGCACAAACGTGGCCAACTGCTCAGCCTGTTTTaGCCTTCTAGGTCACAATCTCTGCTCACATGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: NLHKRGQLLSLF*PSRSQSLLTCK Trigger: CTTGCATGTGAGCAGAGATTGTGACCTAGAAGGCCAAAACAGGCTGAGCAGTTGGCCACGTTTGTGCAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
||
| 3UTR-3UTR CAA 90 bp | GAACACTTGGTCTCTATTTGGCCGAGCTGTTTAGGGAGGCATGGAACCTTCAGGTCACTCAACTTTTGGTaGAGATGTGAGCTCTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: EHLVSIWPSCLGRHGTFRSLNFW*RCELSA Trigger: AGCTGAGAGCTCACATCTCAACCAAAAGTTGAGTGA...CCTGAAGGTTCCATGCCTCCCTAAACAGCTCGGCCAAATAGAGACCAAGTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
||
| 3UTR TCA 72 bp | CTTCTAGGTCACAATCTCTGCTCACATGCAAGAGTATaGGACACAACCTGTCCCCGTCATTGGGTAGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: LLGHNLCSHARV*DTTCPRHWVAS Trigger: AGATGCTACCCAATGACGGGGACAGGTTGTGTCTCATACTCTTGCATGTGAGCAGAGATTGTGACCTAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
||
| 3UTR GCA 72 bp | CTGTTTTGGCCTTCTAGGTCACAATCTCTGCTCACATaGAAGAGTATGAGACACAACCTGTCCCCGTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: LFWPSRSQSLLT*KSMRHNLSPSL Trigger: CAATGACGGGGACAGGTTGTGTCTCATACTCTTGCATGTGAGCAGAGATTGTGACCTAGAAGGCCAAAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
||
| 3UTR CCA 72 bp | CCACAGACTCAGATATTTGAACACTTGGTCTCTATTTaGCCGAGCTGTTTAGGGAGGCATGGAACCTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PQTQIFEHLVSI*PSCLGRHGTFR Trigger: CCTGAAGGTTCCATGCCTCCCTAAACAGCTCGGCCAAATAGAGACCAAGTGTTCAAATATCTGAGTCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
||
| 3UTR TCA 72 bp | AAAAATCACCTCCAAGACGATCTGATTGTGTCCATCTaGGGCTTCTCATCCTTACCCTTAGACACTGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: KNHLQDDLIVSI*GFSSLPLDTGR Trigger: TCTTCCAGTGTCTAAGGGTAAGGATGAGAAGCCTCAGATGGACACAATCAGATCGTCTTGGAGGTGATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| 3UTR CCA 72 bp | GTCCATCTGAGGCTTCTCATCCTTACCCTTAGACACTaGAAGAAAATGCCATTCTCACACAGATCTTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: VHLRLLILTLRH*KKMPFSHRSLQ Trigger: CTGTAAAGATCTGTGTGAGAATGGCATTTTCTTCCAGTGTCTAAGGGTAAGGATGAGAAGCCTCAGATGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| 3UTR TCA 72 bp | CACAACACACAAACCTTGGTGCTGTTTTACGTTGACTaGTTTATACTGTGTAGCAGTAAAACCTCGGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: HNTQTLVLFYVD*FILCSSKTSGS Trigger: TGATCCCGAGGTTTTACTGCTACACAGTATAAATCAGTCAACGTAAAACAGCACCAAGGTTTGTGTGTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | ATCCGTGCACAGCTGCCTCCTCTCCGGAGTTCCACACGCACCCCAGGGTCAGCCCAGGCCCTGGATTCCTaGCCCAGCTCTGGAGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: IRAQLPPLRSSTRTPGSAQALDS*PSSGAD Trigger: GTCGGCTCCAGAGCTGGGCCAGGAATCCAGGGCCTG...GGCTGACCCTGGGGTGCGTGTGGAACTCCGGAGAGGAGGCAGCTGTGCACGGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128311.8 ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | GATGTTAAGATGCTGACCCTGGAGGCATCCCCACCACAAAGGCAGAGCAGGGGGCTGGAGGAGGGGGCCTaGCAGAGCCCAGTGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DVKMLTLEASPPQRQSRGLEEGA*QSPVGP Trigger: GGGCCCCACTGGGCTCTGCCAGGCCCCCTCCTCCAG...CCCCCTGCTCTGCCTTTGTGGTGGGGATGCCTCCAGGGTCAGCATCTTAACATC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000128311.8 ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | GGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGCTGGAGGAGGGGGCCTaGCAGAGCCCAGTGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GAPSRDTQRLCLVPSEDRLEEGA*QSPVGP Trigger: GGGCCCCACTGGGCTCTGCCAGGCCCCCTCCTCCAG...CCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | CACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGAGGGCCTGGCAGAGCCCAGTaGGGCCCAGTCCTCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLAETRRDCVWCHPRIGGPGRAQ*GPVLLG Trigger: CCCCAGGAGGACTGGGCCCCACTGGGCTCTGCCAGG...CCCTCCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGCTGGAGGAGGGGGCCTaGCAGAGCCCAGTGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TDMVHLAETRRDCVWCHPLEEGA*QSPVGP Trigger: GGGCCCCACTGGGCTCTGCCAGGCCCCCTCCTCCAG...CGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTCTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR GCA 90 bp | CGCATTGCCTCTGATCCGTGCACAGCTGCCTCCTCTCCGGAGTTCCACACGCACACGATACGGTCCTTGTaGCGGGCCTCCCAGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RIASDPCTAASSPEFHTHTIRSL*RASQAS Trigger: AGAGGCCTGGGAGGCCCGGCACAAGGACCGTATCGT...GTGCGTGTGGAACTCCGGAGAGGAGGCAGCTGTGCACGGATCAGAGGCAATGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGAGGGAACCTGGCAGAGCCCAGTaGGGCCCAGTCCTCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSRDTQRLCLVPSEDRREPGRAQ*GPVLLG Trigger: CCCCAGGAGGACTGGGCCCCACTGGGCTCTGCCAGG...TTCCCTCCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGAGGGAAGAGACCTGGCAGAGCCCAGTaGGGCCCAGTCCTCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AETRRDCVWCHPRIGGKRPGRAQ*GPVLLG Trigger: CCCCAGGAGGACTGGGCCCCACTGGGCTCTGCCAGG...TCTCTTCCCTCCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR TCA 90 bp | ACAGACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGGCTGCTGCCGCTGTCTaGGTCTGGAGGAGGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDMVHLAETRRDCVWCHPAAAAV*VWRRGP Trigger: AGGCCCCCTCCTCCAGACTCAGACAGCGGCAGCAGC...CGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGAGGGAAGAGAGGAAGCCCGGGGCTGTaGCCTCCCACTTCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AETRRDCVWCHPRIGGKRGSPGL*PPTSGR Trigger: CCTGCCTGAAGTGGGAGGCCACAGCCCCGGGCTTCC...TCTCTTCCCTCCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGGGAAGCCCGGGGCTGTaGCCTCCCACTTCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TDMVHLAETRRDCVWCHPGSPGL*PPTSGR Trigger: CCTGCCTGAAGTGGGAGGCCACAGCCCCGGGCTTCC...CGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCTGATCCGTGCACAGCTGCCTCCTCTCCGGAGTTCCACACGCACCCCAGGTCTCTTCAGCCTGGGTaGCAGCTTGAACAGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASDPCTAASSPEFHTHPRSLQPG*QLEQKV Trigger: CACCTTCTGTTCAAGCTGTCACCCAGGCTGAAGAGA...CCTGGGGTGCGTGTGGAACTCCGGAGAGGAGGCAGCTGTGCACGGATCAGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128311.8 ENSMUST00000145401.8 |
||
| CDS-3UTR TCA 90 bp | ACAGACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGCGGCAGCACATGCTCTaGGCCTGGGAGCCCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TDMVHLAETRRDCVWCHPRQHML*AWEPWE Trigger: TTCCCAGGGCTCCCAGGCTCAGAGCATGTGCTGCCG...CGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR TCA 90 bp | CTCCCCAAAACAGACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGGCTGCTGCCGCTGTCTaGGTCTGGAGGAGGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPKTDMVHLAETRRDCVWAAAAV*VWRRGP Trigger: AGGCCCCCTCCTCCAGACTCAGACAGCGGCAGCAGC...CCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTCTGTTTTGGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR GCA 90 bp | GGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGTGCCCTCCTCCTCCTTaGTCTGGGACCGAGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GAPSRDTQRLCLVPSEDRCPPPP*SGTETP Trigger: GGGAGTCTCGGTCCCAGAGCAAGGAGGAGGAGGGCA...CCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCTGATCCGTGCACAGCTGCCTCCTCTCCGGAGTTCCACACGCACCCCAGGAAACTGCACAGGGCATaGCGGGCTATAGGTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASDPCTAASSPEFHTHPRKLHRA*RAIGEC Trigger: ACACTCACCTATAGCCCGGCATGCCCTGTGCAGTTT...CCTGGGGTGCGTGTGGAACTCCGGAGAGGAGGCAGCTGTGCACGGATCAGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128311.8 ENSMUST00000145401.8 |
||
| CDS-3UTR GCA 90 bp | TTGCCTCTGATCCGTGCACAGCTGCCTCCTCTCCGGAGTTCCACACGCACCCCATTCAGGCAGGCAAACTaGACAGGGCATGCCGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LPLIRAQLPPLRSSTRTPFRQAN*TGHAGL Trigger: TAGCCCGGCATGCCCTGTGCAGTTTGCCTGCCTGAA...TGGGGTGCGTGTGGAACTCCGGAGAGGAGGCAGCTGTGCACGGATCAGAGGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128311.8 ENSMUST00000145401.8 |
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| CDS-3UTR TCA 90 bp | GCTTCCTGTCCTCACTGCCATGTGTGCCGCTGGCTGCCATGTCTCCACACCTCTGTGTCCTGGGAAGGCTaGGAGGTGGCATTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ASCPHCHVCRWLPCLHTSVSWEG*EVAFLT Trigger: TGTGAGGAATGCCACCTCTCAGCCTTCCCAGGACAC...AGAGGTGTGGAGACATGGCAGCCAGCGGCACACATGGCAGTGAGGACAGGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCTCTGAGCTCACAATGCTGCATGCAGTTCCTCTCTGCGCTCCATGGACTCTGCCCTCCTCCTCCTTaGTCTGGGACCGAGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PALSSQCCMQFLSALHGLCPPPP*SGTETP Trigger: GGGAGTCTCGGTCCCAGAGCAAGGAGGAGGAGGGCA...GAGTCCATGGAGCGCAGAGAGGAACTGCATGCAGCATTGTGAGCTCAGAGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCCAAAACAGACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGCAGGCCCTGGATTCCTaGCCCAGCTCTGGAGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPKTDMVHLAETRRDCVWQALDS*PSSGAD Trigger: GTCGGCTCCAGAGCTGGGCCAGGAATCCAGGGCCTG...CCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTCTGTTTTGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR CCA 90 bp | CTGTCCTCACTGCCATGTGTGCCGCTGGCTGCCATGTCTCCACACCTCTGGAACCTCTCCAAAGTCATCTaGACACGCAGCCTGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSSLPCVPLAAMSPHLWNLSKVI*TRSLAS Trigger: CGAGGCCAGGCTGCGTGTCCAGATGACTTTGGAGAG...GTTCCAGAGGTGTGGAGACATGGCAGCCAGCGGCACACATGGCAGTGAGGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCCTCACTGCCATGTGTGCCGCTGGCTGCCATGTCTCCACACCTCTGGAACAGGCCCTGTCTCCTCTaGGGAGAAGGAAAGGACACG | + |
|
Preference number: 4 (lower is better) Translates to: LSSLPCVPLAAMSPHLWNRPCLL*GEGKDT Trigger: CGTGTCCTTTCCTTCTCCCCAGAGGAGACAGGGCCT...GTTCCAGAGGTGTGGAGACATGGCAGCCAGCGGCACACATGGCAGTGAGGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | CACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGAGGGCGGCCTCCCAGATGCTaGACTCTGAGCCTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HLAETRRDCVWCHPRIGGRPPRC*TLSLLM Trigger: CATCAGCAGGCTCAGAGTCCAGCATCTGGGAGGCCG...CCCTCCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR CCA 90 bp | TCTCCCCAAAACAGACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGGAAGCCCGGGGCTGTaGCCTCCCACTTCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPQNRHGAPSRDTQRLCLGSPGL*PPTSGR Trigger: CCTGCCTGAAGTGGGAGGCCACAGCCCCGGGCTTCC...CAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTCTGTTTTGGGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR TCA 90 bp | AGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGAGGGAAGAGAATCGGCAGCACATGCTCTaGGCCTGGGAGCCCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RDTQRLCLVPSEDRREENRQHML*AWEPWE Trigger: TTCCCAGGGCTCCCAGGCTCAGAGCATGTGCTGCCG...ATTCTCTTCCCTCCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR TCA 90 bp | GACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGGTGTCCTGGGAAGGCTaGGAGGTGGCATTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: DMVHLAETRRDCVWCHPRVSWEG*EVAFLT Trigger: TGTGAGGAATGCCACCTCTCAGCCTTCCCAGGACAC...CCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR GCA 90 bp | TCTACTGCTTCCATCCGCATTGCCTCTGATCCGTGCACAGCTGCCTCCTCTCCGTTGACTCCTCCTCCTTaGTCTGGGACCGAGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: STASIRIASDPCTAASSPLTPPP*SGTETP Trigger: GGGAGTCTCGGTCCCAGAGCAAGGAGGAGGAGTCAA...CGGAGAGGAGGCAGCTGTGCACGGATCAGAGGCAATGCGGATGGAAGCAGTAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
||
| CDS-3UTR GCA 90 bp | CACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGAGGGTTCAGGCAGGCAAACTaGACAGGGCATGCCGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HLAETRRDCVWCHPRIGGFRQAN*TGHAGL Trigger: TAGCCCGGCATGCCCTGTGCAGTTTGCCTGCCTGAA...CCCTCCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTACTGCTTCCATCCGCATTGCCTCTGATCCGTGCACAGCTGCCTCCTCTCCGGCCTCCCAGATGCTaGACTCTGAGCCTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLLLPSALPLIRAQLPPLRPPRC*TLSLLM Trigger: CATCAGCAGGCTCAGAGTCCAGCATCTGGGAGGCCG...GAGAGGAGGCAGCTGTGCACGGATCAGAGGCAATGCGGATGGAAGCAGTAGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128311.8 ENSMUST00000145401.8 |
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| CDS-3UTR CCA 90 bp | TCCCAGGACACCAGCTCTGAGCTCACAATGCTGCATGCAGTTCCTCTCTGCGCTCGGCCTCCCAGATGCTaGACTCTGAGCCTGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SQDTSSELTMLHAVPLCARPPRC*TLSLLM Trigger: CATCAGCAGGCTCAGAGTCCAGCATCTGGGAGGCCG...AGCGCAGAGAGGAACTGCATGCAGCATTGTGAGCTCAGAGCTGGTGTCCTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
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| CDS-3UTR CCA 90 bp | GCGGATGTTAAGATGCTGACCCTGGAGGCATCCCCACCACAAAGGCAGAGCAGGGGGCAGGTAGGCAGATaGCTGTCCTTCCAACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ADVKMLTLEASPPQRQSRGQVGR*LSFQLQ Trigger: CTGGAGTTGGAAGGACAGCCATCTGCCTACCTGCCC...CCTGCTCTGCCTTTGTGGTGGGGATGCCTCCAGGGTCAGCATCTTAACATCCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000128311.8 ENSMUST00000145401.8 |
||
| CDS-3UTR TCA 90 bp | GCGGATGTTAAGATGCTGACCCTGGAGGCATCCCCACCACAAAGGCAGAGCAGGCACAACGCCCAGAGCTaGCATTGCTCTGCAGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: ADVKMLTLEASPPQRQSRHNAQS*HCSADQ Trigger: CTGATCTGCAGAGCAATGTCAGCTCTGGGCGTTGTG...CCTGCTCTGCCTTTGTGGTGGGGATGCCTCCAGGGTCAGCATCTTAACATCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020518.11 ENSMUST00000128311.8 ENSMUST00000145401.8 |
||
| CDS-3UTR TCA 90 bp | GACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGCACAACGCCCAGAGCTaGCATTGCTCTGCAGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: DMVHLAETRRDCVWCHPRHNAQS*HCSADQ Trigger: CTGATCTGCAGAGCAATGTCAGCTCTGGGCGTTGTG...CCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020518.11 ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR TCA 90 bp | AGTCTACTGCTTCCATCCGCATTGCCTCTGATCCGTGCACAGCTGCCTCCTCTCGTGTCCTGGGAAGGCTaGGAGGTGGCATTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SLLLPSALPLIRAQLPPLVSWEG*EVAFLT Trigger: TGTGAGGAATGCCACCTCTCAGCCTTCCCAGGACAC...GAGAGGAGGCAGCTGTGCACGGATCAGAGGCAATGCGGATGGAAGCAGTAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128311.8 ENSMUST00000145401.8 |
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| CDS-3UTR GCA 90 bp | ACAGACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGTTCAGGCAGGCAAACTaGACAGGGCATGCCGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TDMVHLAETRRDCVWCHPFRQAN*TGHAGL Trigger: TAGCCCGGCATGCCCTGTGCAGTTTGCCTGCCTGAA...CGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR CCA 90 bp | AGTCTACTGCTTCCATCCGCATTGCCTCTGATCCGTGCACAGCTGCCTCCTCTCCTCTCCAAAGTCATCTaGACACGCAGCCTGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLLLPSALPLIRAQLPPLLSKVI*TRSLAS Trigger: CGAGGCCAGGCTGCGTGTCCAGATGACTTTGGAGAG...GAGAGGAGGCAGCTGTGCACGGATCAGAGGCAATGCGGATGGAAGCAGTAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128311.8 ENSMUST00000145401.8 |
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| CDS-3UTR CCA 90 bp | GCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGAGGGAAGAGACTCTCCAAAGTCATCTaGACACGCAGCCTGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AETRRDCVWCHPRIGGKRLSKVI*TRSLAS Trigger: CGAGGCCAGGCTGCGTGTCCAGATGACTTTGGAGAG...TCTCTTCCCTCCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR CCA 90 bp | GTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGAAGGCCCTGTCTCCTCTaGGGAGAAGGAAAGGACACG | + |
|
Preference number: 4 (lower is better) Translates to: VHLAETRRDCVWCHPRIGRPCLL*GEGKDT Trigger: CGTGTCCTTTCCTTCTCCCCAGAGGAGACAGGGCCT...TCCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR TCA 90 bp | GCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGAGGGAAGAGACACAACGCCCAGAGCTaGCATTGCTCTGCAGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: AETRRDCVWCHPRIGGKRHNAQS*HCSADQ Trigger: CTGATCTGCAGAGCAATGTCAGCTCTGGGCGTTGTG...TCTCTTCCCTCCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020518.11 ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR TCA 90 bp | CTCAGCCTGTTTTGGCCTTCTAGGTCACAATCTCTGCTCACATGCAAGAGTATGGCTGCTGCCGCTGTCTaGGTCTGGAGGAGGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLFWPSRSQSLLTCKSMAAAAV*VWRRGP Trigger: AGGCCCCCTCCTCCAGACTCAGACAGCGGCAGCAGC...CATACTCTTGCATGTGAGCAGAGATTGTGACCTAGAAGGCCAAAACAGGCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
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| CDS-3UTR GCA 90 bp | TTTCAGGCCTGGGACAGAGCCAGAAAGACAAGAGAAGCGAAGGCGGATGTTAAGTGCCCTCCTCCTCCTTaGTCTGGGACCGAGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FQAWDRARKTREAKADVKCPPPP*SGTETP Trigger: GGGAGTCTCGGTCCCAGAGCAAGGAGGAGGAGGGCA...CTTAACATCCGCCTTCGCTTCTCTTGTCTTTCTGGCTCTGTCCCAGGCCTGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128311.8 ENSMUST00000145401.8 |
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| CDS-3UTR GCA 90 bp | GGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGGCACAACTACAAGGATaGTGGCTGACCATTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GAPSRDTQRLCLVPSEDRAQLQG*WLTIAS Trigger: GCTGGCAATGGTCAGCCAGCATCCTTGTAGTTGTGC...CCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR GCA 90 bp | GGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGAAACTGCACAGGGCATaGCGGGCTATAGGTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GAPSRDTQRLCLVPSEDRKLHRA*RAIGEC Trigger: ACACTCACCTATAGCCCGGCATGCCCTGTGCAGTTT...CCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR CCA 90 bp | GACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGGCCTGGCCTCGTAGATaGAACCAGGATTCAGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: DMVHLAETRRDCVWCHPRAWPRR*NQDSVR Trigger: TCGAACTGAATCCTGGTTCCATCTACGAGGCCAGGC...CCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR TCA 90 bp | ATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATACACAACGCCCAGAGCTaGCATTGCTCTGCAGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: MVHLAETRRDCVWCHPRIHNAQS*HCSADQ Trigger: CTGATCTGCAGAGCAATGTCAGCTCTGGGCGTTGTG...TATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020518.11 ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR TCA 90 bp | GTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGACCCATGATGCAGCGGTaGAGTGTGATGGTGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VHLAETRRDCVWCHPRIGPMMQR*SVMVKL Trigger: CAACTTCACCATCACACTTCACCGCTGCATCATGGG...TCCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR CCA 90 bp | AGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGAGGGAAGAGAATGGGCAGGTAGGCAGATaGCTGTCCTTCCAACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RDTQRLCLVPSEDRREENGQVGR*LSFQLQ Trigger: CTGGAGTTGGAAGGACAGCCATCTGCCTACCTGCCC...ATTCTCTTCCCTCCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR CCA 90 bp | GCCTTCCTGGTGTCTCCATTCCAGACCCATGGACCTCAGAGCAGAGAGAAAACAGGGCAGGTAGGCAGATaGCTGTCCTTCCAACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AFLVSPFQTHGPQSREKTGQVGR*LSFQLQ Trigger: CTGGAGTTGGAAGGACAGCCATCTGCCTACCTGCCC...TGTTTTCTCTCTGCTCTGAGGTCCATGGGTCTGGAATGGAGACACCAGGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
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| CDS-3UTR TCA 90 bp | ATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATACCCATGATGCAGCGGTaGAGTGTGATGGTGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: MVHLAETRRDCVWCHPRIPMMQR*SVMVKL Trigger: CAACTTCACCATCACACTTCACCGCTGCATCATGGG...TATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR TCA 90 bp | AAACAAACCCTTCCCTCCAGGAGCATGGCCTTCCTGGTGTCTCCATTCCAGACCCCCATGATGCAGCGGTaGAGTGTGATGGTGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQTLPSRSMAFLVSPFQTPMMQR*SVMVKL Trigger: CAACTTCACCATCACACTTCACCGCTGCATCATGGG...GGTCTGGAATGGAGACACCAGGAAGGCCATGCTCCTGGAGGGAAGGGTTTGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| CDS-3UTR TCA 90 bp | CTCCCCAAAACAGACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTCTCTTCAGCCTGGGTaGCAGCTTGAACAGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPKTDMVHLAETRRDCVWSLQPG*QLEQKV Trigger: CACCTTCTGTTCAAGCTGTCACCCAGGCTGAAGAGA...CCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTCTGTTTTGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAAAACTGCACAGGGCATaGCGGGCTATAGGTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MVHLAETRRDCVWCHPRIKLHRA*RAIGEC Trigger: ACACTCACCTATAGCCCGGCATGCCCTGTGCAGTTT...TATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCCAAAACAGACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGGCCTGGCCTCGTAGATaGAACCAGGATTCAGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LPKTDMVHLAETRRDCVWAWPRR*NQDSVR Trigger: TCGAACTGAATCCTGGTTCCATCTACGAGGCCAGGC...CCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTCTGTTTTGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAACCCTTCCCTCCAGGAGCATGGCCTTCCTGGTGTCTCCATTCCAGACCGCCTGGCCTCGTAGATaGAACCAGGATTCAGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KQTLPSRSMAFLVSPFQTAWPRR*NQDSVR Trigger: TCGAACTGAATCCTGGTTCCATCTACGAGGCCAGGC...GGTCTGGAATGGAGACACCAGGAAGGCCATGCTCCTGGAGGGAAGGGTTTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGCCTGGGACAGAGCCAGAAAGACAAGAGAAGCGAAGGCGGATGTTAAGAGGCCCTGTCTCCTCTaGGGAGAAGGAAAGGACACG | + |
|
Preference number: 4 (lower is better) Translates to: FQAWDRARKTREAKADVKRPCLL*GEGKDT Trigger: CGTGTCCTTTCCTTCTCCCCAGAGGAGACAGGGCCT...CTTAACATCCGCCTTCGCTTCTCTTGTCTTTCTGGCTCTGTCCCAGGCCTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128311.8 ENSMUST00000145401.8 |
||
| CDS-3UTR TCA 90 bp | CAATCTCTGCTCACATGCAAGAGTATGAGACACAACCTGTCCCCGTCATTGGGTAGGGTGGGTCCAACTTaGCTCCTCCTCCTTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSLLTCKSMRHNLSPSLGRVGPT*LLLLAL Trigger: CAGAGCAAGGAGGAGGAGTCAAGTTGGACCCACCCT...ACCCAATGACGGGGACAGGTTGTGTCTCATACTCTTGCATGTGAGCAGAGATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
||
| CDS-3UTR TCA 90 bp | TCTCCCCAAAACAGACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGTCTCTTCAGCCTGGGTaGCAGCTTGAACAGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPQNRHGAPSRDTQRLCLSLQPG*QLEQKV Trigger: CACCTTCTGTTCAAGCTGTCACCCAGGCTGAAGAGA...CAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTCTGTTTTGGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR TCA 90 bp | GGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGCTGCTGATGAAGTACTaGCACCATTCTGTCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GAPSRDTQRLCLVPSEDRLLMKY*HHSVLL Trigger: AAGCAAGACAGAATGGTGTCAGTACTTCATCAGCAG...CCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR CCA 90 bp | CACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGAGGGTCAGCAGAAGAAAGATaGGCACAACTACAAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: HLAETRRDCVWCHPRIGGSAEER*AQLQGC Trigger: GCATCCTTGTAGTTGTGCCCATCTTTCTTCTGCTGA...CCCTCCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | GACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGGAACGCCTCGGGAGATaGAATGTTCTGGTAAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: DMVHLAETRRDCVWCHPRERLGR*NVLVKD Trigger: ATCTTTTACCAGAACATTCCATCTCCCGAGGCGTTC...CCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR TCA 90 bp | GCGGATGTTAAGATGCTGACCCTGGAGGCATCCCCACCACAAAGGCAGAGCAGGAGGTGCATTTGTGTTTaGTTTCAGTCACCTGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ADVKMLTLEASPPQRQSRRCICV*FQSPGY Trigger: GTAACCAGGTGACTGAAATCAAACACAAATGCACCT...CCTGCTCTGCCTTTGTGGTGGGGATGCCTCCAGGGTCAGCATCTTAACATCCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128311.8 ENSMUST00000145401.8 |
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| CDS-3UTR TCA 90 bp | GGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGAGGTGCATTTGTGTTTaGTTTCAGTCACCTGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GAPSRDTQRLCLVPSEDRRCICV*FQSPGY Trigger: GTAACCAGGTGACTGAAATCAAACACAAATGCACCT...CCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGAGGGAACTGCTGATGAAGTACTaGCACCATTCTGTCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSRDTQRLCLVPSEDRRELLMKY*HHSVLL Trigger: AAGCAAGACAGAATGGTGTCAGTACTTCATCAGCAG...TTCCCTCCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR TCA 90 bp | ACAGACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGCTGCTGATGAAGTACTaGCACCATTCTGTCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TDMVHLAETRRDCVWCHPLLMKY*HHSVLL Trigger: AAGCAAGACAGAATGGTGTCAGTACTTCATCAGCAG...CGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTCTGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATATCAGCAGAAGAAAGATaGGCACAACTACAAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: MVHLAETRRDCVWCHPRISAEER*AQLQGC Trigger: GCATCCTTGTAGTTGTGCCCATCTTTCTTCTGCTGA...TATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCCAAAACAGACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTCAGCAGAAGAAAGATaGGCACAACTACAAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LPKTDMVHLAETRRDCVWSAEER*AQLQGC Trigger: GCATCCTTGTAGTTGTGCCCATCTTTCTTCTGCTGA...CCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTCTGTTTTGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGGCACAGTCTACTGCTTCCATCCGCATTGCCTCTGATCCGTGCACAGCTGGAACGCCTCGGGAGATaGAATGTTCTGGTAAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VRHSLLLPSALPLIRAQLERLGR*NVLVKD Trigger: ATCTTTTACCAGAACATTCCATCTCCCGAGGCGTTC...CAGCTGTGCACGGATCAGAGGCAATGCGGATGGAAGCAGTAGACTGTGCCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128311.8 ENSMUST00000145401.8 |
||
| CDS-3UTR CCA 90 bp | AGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGAGGGAAGAGAATGAACGCCTCGGGAGATaGAATGTTCTGGTAAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RDTQRLCLVPSEDRREENERLGR*NVLVKD Trigger: ATCTTTTACCAGAACATTCCATCTCCCGAGGCGTTC...ATTCTCTTCCCTCCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| 3UTR CAA 72 bp | CCGGCGAGCATTCTTGTGAGCTGTTGCTGTTGTATTTaGAATGAATTCCCACAGACCCGGAGCTTCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PASILVSCCCCI*NEFPQTRSFSI Trigger: GATGGAGAAGCTCCGGGTCTGTGGGAATTCATTCAAAATACAACAGCAACAGCTCACAAGAATGCTCGCCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| CDS-3UTR TCA 90 bp | CACCCACAGCCTGCAGTCAAAAGCGTCCCTTCTGGTCTTAATGGGAAAGGCACTAGGTGCATTTGTGTTTaGTTTCAGTCACCTGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: HPQPAVKSVPSGLNGKGTRCICV*FQSPGY Trigger: GTAACCAGGTGACTGAAATCAAACACAAATGCACCT...AGTGCCTTTCCCATTAAGACCAGAAGGGACGCTTTTGACTGCAGGCTGTGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| 3UTR CAA 72 bp | GGAGGGGATAGTACTTTCAGTTCACTCAACTTTTGGTaGAGATGTGAGCTCTCAGCTTCCTGTCCTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGDSTFSSLNFW*RCELSASCPHC Trigger: GCAGTGAGGACAGGAAGCTGAGAGCTCACATCTCAACCAAAAGTTGAGTGAACTGAAAGTACTATCCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
||
| 3UTR CAA 72 bp | TTGGAAATAGTCCTCACACTAGCATTGTTCCCACGCTaGCCCTTTAAGAGCCCTTCAAGGAGCAAGAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LEIVLTLALFPR*PFKSPSRSKRT Trigger: AGTCCTCTTGCTCCTTGAAGGGCTCTTAAAGGGCAAGCGTGGGAACAATGCTAGTGTGAGGACTATTTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
||
| 3UTR CAA 72 bp | CCAGGAAAGAAAATATCACAGATGGGTAAGACTTCTTaGAATCAGTCGGTGAGACTCCTTCCAGCTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGKKISQMGKTS*NQSVRLLPADL Trigger: AAGATCAGCTGGAAGGAGTCTCACCGACTGATTCAAAGAAGTCTTACCCATCTGTGATATTTTCTTTCCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCTGATCCGTGCACAGCTGCCTCCTCTCCGGAGTTCCACACGCACCCCAGGGAGGGTGGGTCCAACTaGATGTGTCTCCTGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASDPCTAASSPEFHTHPREGGSN*MCLLGR Trigger: CCTGCCCAGGAGACACATCAAGTTGGACCCACCCTC...CCTGGGGTGCGTGTGGAACTCCGGAGAGGAGGCAGCTGTGCACGGATCAGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128311.8 ENSMUST00000145401.8 |
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| CDS-3UTR CAA 90 bp | GCCTCTGATCCGTGCACAGCTGCCTCCTCTCCGGAGTTCCACACGCACCCCAGGCGCCCAGAGCTGACATaGCTCTGCAGATCAGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ASDPCTAASSPEFHTHPRRPELT*LCRSEG Trigger: ACCCTCTGATCTGCAGAGCAATGTCAGCTCTGGGCG...CCTGGGGTGCGTGTGGAACTCCGGAGAGGAGGCAGCTGTGCACGGATCAGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020518.11 ENSMUST00000128311.8 ENSMUST00000145401.8 |
||
| CDS-3UTR CAA 90 bp | CTGTCCTCACTGCCATGTGTGCCGCTGGCTGCCATGTCTCCACACCTCTGGAACCTGCCCTCCTCCTCCTaGCTCTGGGACCGAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSSLPCVPLAAMSPHLWNLPSSS*LWDRDS Trigger: GGAGTCTCGGTCCCAGAGCAAGGAGGAGGAGGGCAG...GTTCCAGAGGTGTGGAGACATGGCAGCCAGCGGCACACATGGCAGTGAGGACAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| CDS GCA 90 bp | TTGCTGAGACAGGTGAATGCTCCAGCCTTCTGCCCTCCTCCTCCTTaGTCTGGGACCGAGACTCCCCGGCAGACTCCAGAGCAGACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLRQVNAPAFCPPPP*SGTETPRQTPEQTQ Trigger: CTGGGTCTGCTCTGGAGTCTGCCGGGGAGTCTCGGTCCCAGAGCAAGGAGGAGGAGGGCAGAAGGCTGGAGCATTCACCTGTCTCAGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS CCA 90 bp | GAGACAGGTGAATGCTCCAGCCTTCTGCCCTCCTCCTCCTTGCTCTaGGACCGAGACTCCCCGGCAGACTCCAGAGCAGACCCAGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: ETGECSSLLPSSSLL*DRDSPADSRADPAV Trigger: TACAGCTGGGTCTGCTCTGGAGTCTGCCGGGGAGTCTCGGTCCCAGAGCAAGGAGGAGGAGGGCAGAAGGCTGGAGCATTCACCTGTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS GCA 90 bp | TTGCTCTGCAGATCAGAGGGTGGGTCCAACTTGACTCCTCCTCCTTaGTCTGGGACCGAGACTCCCCGGCAGACTCCAGAGCAGACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLCRSEGGSNLTPPP*SGTETPRQTPEQTQ Trigger: CTGGGTCTGCTCTGGAGTCTGCCGGGGAGTCTCGGTCCCAGAGCAAGGAGGAGGAGTCAAGTTGGACCCACCCTCTGATCTGCAGAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
||
| CDS-3UTR CAA 90 bp | TCTGCGCTCCATGGACTCTGCGCTCCATGGACCCTGCGCAGTAGTTCGACCGTCCGCCCAGAGCTGACATaGCTCTGCAGATCAGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SALHGLCAPWTLRSSSTVRPELT*LCRSEG Trigger: ACCCTCTGATCTGCAGAGCAATGTCAGCTCTGGGCG...GACGGTCGAACTACTGCGCAGGGTCCATGGAGCGCAGAGTCCATGGAGCGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020518.11 ENSMUST00000145401.8 |
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| CDS-3UTR CAA 90 bp | ACAGACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGCTGCCCTCCTCCTCCTaGCTCTGGGACCGAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: TDMVHLAETRRDCVWCHPLPSSS*LWDRDS Trigger: GGAGTCTCGGTCCCAGAGCAAGGAGGAGGAGGGCAG...CGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR CAA 90 bp | ATCCGTGCACAGCTGCCTCCTCTCCGGAGTTCCACACGCACCCCAGGGTCAGCCAGCCTGGGTGACAGCTaGAACAGAAGGTGGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: IRAQLPPLRSSTRTPGSASLGDS*NRRWTK Trigger: CTTTGTCCACCTTCTGTTCAAGCTGTCACCCAGGCT...GGCTGACCCTGGGGTGCGTGTGGAACTCCGGAGAGGAGGCAGCTGTGCACGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128311.8 ENSMUST00000145401.8 |
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| CDS-3UTR CAA 90 bp | GACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGGAGGGTGGGTCCAACTaGACTCCTCCTCCTTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DMVHLAETRRDCVWCHPREGGSN*TPPPCS Trigger: AGAGCAAGGAGGAGGAGTCAAGTTGGACCCACCCTC...CCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| CDS-3UTR CAA 90 bp | GGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGCGCCCAGAGCTGACATaGCTCTGCAGATCAGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GAPSRDTQRLCLVPSEDRRPELT*LCRSEG Trigger: ACCCTCTGATCTGCAGAGCAATGTCAGCTCTGGGCG...CCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020518.11 ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR CAA 90 bp | AGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGAGGGAAGAGAATCTGCCCTCCTCCTCCTaGCTCTGGGACCGAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: RDTQRLCLVPSEDRREENLPSSS*LWDRDS Trigger: GGAGTCTCGGTCCCAGAGCAAGGAGGAGGAGGGCAG...ATTCTCTTCCCTCCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR CAA 90 bp | ACAGACATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGGAGGGTGGGTCCAACTaGATGTGTCTCCTGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TDMVHLAETRRDCVWCHPEGGSN*MCLLGR Trigger: CCTGCCCAGGAGACACATCAAGTTGGACCCACCCTC...CGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCATGTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR CAA 90 bp | GCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAGGAGGGAAGAGAGAGGGTGGGTCCAACTaGATGTGTCTCCTGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AETRRDCVWCHPRIGGKREGGSN*MCLLGR Trigger: CCTGCCCAGGAGACACATCAAGTTGGACCCACCCTC...TCTCTTCCCTCCTATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR CAA 90 bp | CGCATTGCCTCTGATCCGTGCACAGCTGCCTCCTCTCCGGAGTTCCACACGCACAGCCTGGGTGACAGCTaGAACAGAAGGTGGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RIASDPCTAASSPEFHTHSLGDS*NRRWTK Trigger: CTTTGTCCACCTTCTGTTCAAGCTGTCACCCAGGCT...GTGCGTGTGGAACTCCGGAGAGGAGGCAGCTGTGCACGGATCAGAGGCAATGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128311.8 ENSMUST00000145401.8 |
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| CDS GCA 90 bp | AGCAGAAGAAAGATGGGCACAACTACAAGGATGCTGGCTGACCATTaGCAGCGTGGGACCAGGAGGCCCTGTCTCCTCTGGGGAGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SRRKMGTTTRMLADH*QRGTRRPCLLWGEG Trigger: TCCTTCTCCCCAGAGGAGACAGGGCCTCCTGGTCCCACGCTGGCAATGGTCAGCCAGCATCCTTGTAGTTGTGCCCATCTTTCTTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS GCA 90 bp | CCAGTGGCAGTCGATCCTGTAAATACTGTTGCTGAGACAGGTGAATaGTCCAGCCTTCTGCCCTCCTCCTCCTTGCTCTGGGACCGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PVAVDPVNTVAETGE*SSLLPSSSLLWDRD Trigger: GTCTCGGTCCCAGAGCAAGGAGGAGGAGGGCAGAAGGCTGGAGCATTCACCTGTCTCAGCAACAGTATTTACAGGATCGACTGCCACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS-3UTR CAA 90 bp | TGTCACAGGCTTGGAAATAGTCCTCACACTAGCATTGTTCCCACGCTTGCCCTTCTTGACTCCTCCTCCTaGCTCTGGGACCGAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: CHRLGNSPHTSIVPTLALLDSSS*LWDRDS Trigger: GGAGTCTCGGTCCCAGAGCAAGGAGGAGGAGTCAAG...AAGGGCAAGCGTGGGAACAATGCTAGTGTGAGGACTATTTCCAAGCCTGTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
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| CDS-3UTR CAA 90 bp | ATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAAGCCTGGGTGACAGCTaGAACAGAAGGTGGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: MVHLAETRRDCVWCHPRISLGDS*NRRWTK Trigger: CTTTGTCCACCTTCTGTTCAAGCTGTCACCCAGGCT...TATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR CAA 90 bp | GCGGATGTTAAGATGCTGACCCTGGAGGCATCCCCACCACAAAGGCAGAGCAGGAAGGTGCATTTGTGTTaGATTTCAGTCACCTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: ADVKMLTLEASPPQRQSRKVHLC*ISVTWL Trigger: TAACCAGGTGACTGAAATCAAACACAAATGCACCTT...CCTGCTCTGCCTTTGTGGTGGGGATGCCTCCAGGGTCAGCATCTTAACATCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128311.8 ENSMUST00000145401.8 |
||
| CDS-3UTR CAA 90 bp | ATGGTGCACCTAGCAGAGACACGCAGAGACTGTGTCTGGTGCCATCCGAGGATAAAGGTGCATTTGTGTTaGATTTCAGTCACCTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: MVHLAETRRDCVWCHPRIKVHLC*ISVTWL Trigger: TAACCAGGTGACTGAAATCAAACACAAATGCACCTT...TATCCTCGGATGGCACCAGACACAGTCTCTGCGTGTCTCTGCTAGGTGCACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS-3UTR CAA 90 bp | GGCCTTCCTGGTGTCTCCATTCCAGACCCATGGACCTCAGAGCAGAGAGAAAACAAGGTGCATTTGTGTTaGATTTCAGTCACCTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: GLPGVSIPDPWTSEQRENKVHLC*ISVTWL Trigger: TAACCAGGTGACTGAAATCAAACACAAATGCACCTT...GTTTTCTCTCTGCTCTGAGGTCCATGGGTCTGGAATGGAGACACCAGGAAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145401.8 |
||
| CDS GCA 72 bp | AGATCAGAGGGTGGGTCCAACTTGACTCCTCCTCCTTaGTCTGGGACCGAGACTCCCCGGCAGACTCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RSEGGSNLTPPP*SGTETPRQTPE Trigger: CTCTGGAGTCTGCCGGGGAGTCTCGGTCCCAGAGCAAGGAGGAGGAGTCAAGTTGGACCCACCCTCTGATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
||
| CDS GCA 72 bp | AAGATGGGCACAACTACAAGGATGCTGGCTGACCATTaGCAGCGTGGGACCAGGAGGCCCTGTCTCCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KMGTTTRMLADH*QRGTRRPCLLW Trigger: CCAGAGGAGACAGGGCCTCCTGGTCCCACGCTGGCAATGGTCAGCCAGCATCCTTGTAGTTGTGCCCATCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS CCA 72 bp | ACGCCCAGAGCTGACATTGCTCTGCAGATCAGAGGGTaGGTCCAACTTGACTCCTCCTCCTTGCTCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: TPRADIALQIRG*VQLDSSSLLWD Trigger: GTCCCAGAGCAAGGAGGAGGAGTCAAGTTGGACCCACCCTCTGATCTGCAGAGCAATGTCAGCTCTGGGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
||
| CDS CAA 72 bp | CTGACATTGCTCTGCAGATCAGAGGGTGGGTCCAACTaGACTCCTCCTCCTTGCTCTGGGACCGAGACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LTLLCRSEGGSN*TPPPCSGTETP Trigger: GGGAGTCTCGGTCCCAGAGCAAGGAGGAGGAGTCAAGTTGGACCCACCCTCTGATCTGCAGAGCAATGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020518.11 |
||
| CDS TCA 72 bp | CAGAAGAAAGATGGGCACAACTACAAGGATGCTGGCTaGCCATTGCCAGCGTGGGACCAGGAGGCCCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QKKDGHNYKDAG*PLPAWDQEALS Trigger: AGACAGGGCCTCCTGGTCCCACGCTGGCAATGGTCAGCCAGCATCCTTGTAGTTGTGCCCATCTTTCTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
||
| CDS CCA 72 bp | ACGCCCAGAGCTGACATTGCTCTGCAGATCAGAGGGTaGGTCCAACTTGATGTGTCTCCTGGGCAGGTACTG | + |
|
Preference number: 6 (lower is better) Translates to: TPRADIALQIRG*VQLDVSPGQVL Trigger: CAGTACCTGCCCAGGAGACACATCAAGTTGGACCCACCCTCTGATCTGCAGAGCAATGTCAGCTCTGGGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS CCA 72 bp | TCAGCAGAAGAAAGATGGGCACAACTACAAGGATGCTaGCTGACCATTGCCAGCGTGGGACCAGGAGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SAEERWAQLQGC*LTIASVGPGGP Trigger: AGGGCCTCCTGGTCCCACGCTGGCAATGGTCAGCCAGCATCCTTGTAGTTGTGCCCATCTTTCTTCTGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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| CDS CCA 72 bp | TCCCAGAAGGTGCATTTGTGTTTGATTTCAGTCACCTaGTTACTGGTAAAGAGGAGCCAGGCCCTGGATTCC | + |
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Preference number: 6 (lower is better) Translates to: SQKVHLCLISVT*LLVKRSQALDS Trigger: GGAATCCAGGGCCTGGCTCCTCTTTACCAGTAACCAGGTGACTGAAATCAAACACAAATGCACCTTCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000128311.8 ENSMUST00000142396.2 ENSMUST00000145401.8 |
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