Pregenerated sensors for IL7R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003882Ensembl transcript IDs: ENSMUST00000003981.6, ENSMUST00000228782.2
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGTGCAGGAAGATCATTGGGCAGAAAACTTTCCACCTCGTCCCTaGCTTCAACGCCTTTCACCTCATGAATCTGGCAGTCCAGGAAAC | + |
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Preference number: 1 (lower is better) Translates to: AVQEDHWAENFPPRP*LQRLSPHESGSPGN Trigger: GTTTCCTGGACTGCCAGATTCATGAGGTGAAAGGCGTTGAAGCCAGGGACGAGGTGGAAAGTTTTCTGCCCAATGATCTTCCTGCACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
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| 3UTR TCA 90 bp | AGAAAACTTTCCACCTCGTCCCTGGCTTCAACGCCTTTCACCTCATaGATCTGGCAGTCCAGGAAACTTTCGGGATTGAAACTCACATTC | + |
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Preference number: 1 (lower is better) Translates to: RKLSTSSLASTPFTS*IWQSRKLSGLKLTF Trigger: GAATGTGAGTTTCAATCCCGAAAGTTTCCTGGACTGCCAGATTCATGAGGTGAAAGGCGTTGAAGCCAGGGACGAGGTGGAAAGTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
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| 3UTR TCA 90 bp | GTAAAAACTAGACATGGTGACATACGCTTCTTCTTGATTCAGTACTaGGGAAGTGGAGATGGGCTGTCTCTGAGAAACTGGTATCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: VKTRHGDIRFFLIQY*GSGDGLSLRNWYQD Trigger: ATCCTGATACCAGTTTCTCAGAGACAGCCCATCTCCACTTCCTCAGTACTGAATCAAGAAGAAGCGTATGTCACCATGTCTAGTTTTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
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| 3UTR TCA 90 bp | AGTTTGGATAATGGACTACATAACCATCCACTTAGTGGTGATGTTTaGCACTCAACAATAGGACAGGTTCATGGCAAGAGAGGGTTGAAG | + |
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Preference number: 1 (lower is better) Translates to: SLDNGLHNHPLSGDV*HSTIGQVHGKRGLK Trigger: CTTCAACCCTCTCTTGCCATGAACCTGTCCTATTGTTGAGTGTCAAACATCACCACTAAGTGGATGGTTATGTAGTCCATTATCCAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR TCA 90 bp | AGCAGCTGTTGTGGTTATCTGAATATAATGCATGGATACAATACATaGCCGGACAGACACTCCAATCCAAATAAACAATGTCAACACTTA | + |
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Preference number: 1 (lower is better) Translates to: SSCCGYLNIMHGYNT*PDRHSNPNKQCQHL Trigger: TAAGTGTTGACATTGTTTATTTGGATTGGAGTGTCTGTCCGGTCATGTATTGTATCCATGCATTATATTCAGATAACCACAACAGCTGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR CCA 90 bp | GTTGAAGTTGGAATGTGTGCCTCATCTGTAGCTGAAAGAAAAATTTaGATATCACTTAAAATCTCTACTTTCAACTTCAGCATCTATGAC | + |
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Preference number: 1 (lower is better) Translates to: VEVGMCASSVAERKI*ISLKISTFNFSIYD Trigger: GTCATAGATGCTGAAGTTGAAAGTAGAGATTTTAAGTGATATCCAAATTTTTCTTTCAGCTACAGATGAGGCACACATTCCAACTTCAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR CAA 90 bp | TCTCTGAGAAACTGGTATCAGGATTCCCGACTGGAAAGGCAATGGTaGAGGGACAGGGACAGGGACATTTGTGTTTCCAGAGTTTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SLRNWYQDSRLERQW*RDRDRDICVSRVWQ Trigger: CTGCCAAACTCTGGAAACACAAATGTCCCTGTCCCTGTCCCTCAACCATTGCCTTTCCAGTCGGGAATCCTGATACCAGTTTCTCAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
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| 3UTR CAA 90 bp | GACAGGGACAGGGACATTTGTGTTTCCAGAGTTTGGCAGCAAGTCTaGATACACAGGAGGCCTATTTCTGTCACCATCTCTGTAGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: DRDRDICVSRVWQQV*IHRRPISVTISVVR Trigger: CCTGACTACAGAGATGGTGACAGAAATAGGCCTCCTGTGTATCAAGACTTGCTGCCAAACTCTGGAAACACAAATGTCCCTGTCCCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
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| 3UTR CAA 90 bp | GCAATGGTTGAGGGACAGGGACAGGGACATTTGTGTTTCCAGAGTTaGGCAGCAAGTCTTGATACACAGGAGGCCTATTTCTGTCACCAT | + |
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Preference number: 2 (lower is better) Translates to: AMVEGQGQGHLCFQS*AASLDTQEAYFCHH Trigger: ATGGTGACAGAAATAGGCCTCCTGTGTATCAAGACTTGCTGCCAAACTCTGGAAACACAAATGTCCCTGTCCCTGTCCCTCAACCATTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGCAATGGTTGAGGGACAGGGACAGGGACATTTGTGTTTCCAGAGTTTGGTGTCTCCAACTCCTCTaGCTGTGCAGGAAGATCATT | + |
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Preference number: 2 (lower is better) Translates to: ERQWLRDRDRDICVSRVWCLQLL*LCRKII Trigger: AATGATCTTCCTGCACAGCCAGAGGAGTTGGAGACA...CCAAACTCTGGAAACACAAATGTCCCTGTCCCTGTCCCTCAACCATTGCCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGTAGTGAATGGTGGATGTATTAAAGAACACCAGAGAAAAACTGCTGAGCTCCTGTTTCTGGTGGGCTaGCTGAAGTCTCAGGCGAGC | + |
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Preference number: 2 (lower is better) Translates to: TVVNGGCIKEHQRKTAELLFLVG*LKSQAS Trigger: GCTCGCCTGAGACTTCAGTCAGCCCACCAGAAACAG...GAGCTCAGCAGTTTTTCTCTGGTGTTCTTTAATACATCCACCATTCACTACAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | ACACACACACACACACATACACACACACACACACAAAATGAACAGTGCTGTATCTGGAAAGGCAATGGTTaGGGGACAGGGACAGGGACA | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTHTHTQNEQCCIWKGNG*GTGTGT Trigger: TGTCCCTGTCCCTGTCCCTCAACCATTGCCTTTCCA...GATACAGCACTGTTCATTTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCTTAATGGTGTCTCCACACATAGGAGGACTCACATAGGAGGACTCCATTCAGACTTTCCATCTCAGTaGTCATTTGGTTGTCGATGG | + |
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Preference number: 2 (lower is better) Translates to: VLNGVSTHRRTHIGGLHSDFPSQ*SFGCRW Trigger: CCATCGACAACCAAATGATCACTGAGATGGAAAGTC...TGAATGGAGTCCTCCTATGTGAGTCCTCCTATGTGTGGAGACACCATTAAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAATAGCGCATGCTTGTATTTGAAGGCAAAAGTCTGGATGAAGAGAGAGACACAACTCCTCTGGCTGTaGAGGAAGATCATTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ENSACLYLKAKVWMKRETQLLWL*RKIIGQ Trigger: CTGCCCAATGATCTTCCTGCACAGCCAGAGGAGTTG...TGTCTCTCTCTTCATCCAGACTTTTGCCTTCAAATACAAGCATGCGCTATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAATAGCGCATGCTTGTATTTGAAGGCAAAAGTCTGGATGAAGAGAGAGACACCTAGAGGAAAGGAGTaGAGGGGCATTGCAGGTACT | + |
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Preference number: 2 (lower is better) Translates to: ENSACLYLKAKVWMKRETPRGKE*RGIAGT Trigger: AGTACCTGCAATGCCCCTCCACTCCTTTCCTCTAGG...TGTCTCTCTCTTCATCCAGACTTTTGCCTTCAAATACAAGCATGCGCTATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAATAGCGCATGCTTGTATTTGAAGGCAAAAGTCTGGATGAAGAGAGAGACACCAGAGAAAAACTGCTaGGCTCTCTCTCTCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: ENSACLYLKAKVWMKRETPEKNC*ALSLSL Trigger: GAGAGAGAGAGAGAGAGCTCAGCAGTTTTTCTCTGG...TGTCTCTCTCTTCATCCAGACTTTTGCCTTCAAATACAAGCATGCGCTATTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAATAGCGCATGCTTGTATTTGAAGGCAAAAGTCTGGATGAAGAGAGAGACACATGGTCTTGATAACTaGCTCTGGAACTTCTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: ENSACLYLKAKVWMKRETHGLDN*LWNFSA Trigger: AGCCGAGAAGTTCCAGAGTCAGTTATCAAGACCATG...TGTCTCTCTCTTCATCCAGACTTTTGCCTTCAAATACAAGCATGCGCTATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGAAGCCAATGGATAATAGCAGCAGGAAAATCATGGTCTTGATAACTGACTTCTTGATTCAGTACTaGGGAAGTGGAGATGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: TEKPMDNSSRKIMVLITDFLIQY*GSGDGL Trigger: CAGCCCATCTCCACTTCCTCAGTACTGAATCAAGAA...GTCAGTTATCAAGACCATGATTTTCCTGCTGCTATTATCCATTGGCTTCTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAGGCTTACAGAGAATGAATTGAATAACTTGAGATTCCCTGGATCCAAACATGCACTCATTGTGGTGTaGGCAGCCCCCTTTTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: QRLTENELNNLRFPGSKHALIVV*AAPFFC Trigger: ACAGAAAAAGGGGGCTGCGCACACCACAATGAGTGC...ATGTTTGGATCCAGGGAATCTCAAGTTATTCAATTCATTCTCTGTAAGCCTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCTTAATGGTGTCTCCACACATAGGAGGACTCACATAGGAGGACTCCATTCACCAGTAATGTTACATTaGATGCAGTCCCTGAGAATA | + |
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Preference number: 2 (lower is better) Translates to: VLNGVSTHRRTHIGGLHSPVMLH*MQSLRI Trigger: TATTCTCAGGGACTGCATGCAATGTAACATTACTGG...TGAATGGAGTCCTCCTATGTGAGTCCTCCTATGTGTGGAGACACCATTAAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCTTAATGGTGTCTCCACACATAGGAGGACTCACATAGGAGGACTCCATTCATACCAAGAGGAAAATTaGCAGAACCAACCAGTAATG | + |
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Preference number: 2 (lower is better) Translates to: VLNGVSTHRRTHIGGLHSYQEEN*QNQPVM Trigger: CATTACTGGTTGGTTCTGCCAATTTTCCTCTTGGTA...TGAATGGAGTCCTCCTATGTGAGTCCTCCTATGTGTGGAGACACCATTAAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | CACAAAATGAACAGTGCTGTATCAATTCCAGAAAATAGCGCATGCTTGTATTTGATGGCAAGAGAGGGTTaGAGTTGGAATGTGTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: HKMNSAVSIPENSACLYLMAREG*SWNVCL Trigger: GAGGCACACATTCCAACTTCAACCCTCTCTTGCCAT...CAAATACAAGCATGCGCTATTTTCTGGAATTGATACAGCACTGTTCATTTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | CACATACACACACACACACACAAAATGAACAGTGCTGTATCAATTCCAGAAAATATGGCAAGAGAGGGTTaGAGTTGGAATGTGTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: HIHTHTHKMNSAVSIPENMAREG*SWNVCL Trigger: GAGGCACACATTCCAACTTCAACCCTCTCTTGCCAT...ATTTTCTGGAATTGATACAGCACTGTTCATTTTGTGTGTGTGTGTGTGTATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | ACACATAGGAGGACTCACATAGGAGGACTCCATTCACTGTTAAATGTTGAACTCCTTAGTGGTGATGTTTaGCACTCAACAATAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: THRRTHIGGLHSLLNVELLSGDV*HSTIGQ Trigger: CTGTCCTATTGTTGAGTGTCAAACATCACCACTAAG...GAGTTCAACATTTAACAGTGAATGGAGTCCTCCTATGTGAGTCCTCCTATGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGTAGTGAATGGTGGATGTATTAAAGAACACCAGAGAAAAACTGCTGAGCTCTTTTCCCACTTCCTTTaGCACATGGTCATGGTATGC | + |
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Preference number: 2 (lower is better) Translates to: TVVNGGCIKEHQRKTAELFSHFL*HMVMVC Trigger: GCATACCATGACCATGTGTCAAAGGAAGTGGGAAAA...GAGCTCAGCAGTTTTTCTCTGGTGTTCTTTAATACATCCACCATTCACTACAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGTAGTGAATGGTGGATGTATTAAAGAACACCAGAGAAAAACTGCTGAGCTCAGGCAAAAGTCTGGATaGAGAGAGAGACAAAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: TVVNGGCIKEHQRKTAELRQKSG*RERQRL Trigger: AAGCCTTTGTCTCTCTCTTCATCCAGACTTTTGCCT...GAGCTCAGCAGTTTTTCTCTGGTGTTCTTTAATACATCCACCATTCACTACAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCTTAATGGTGTCTCCACACATAGGAGGACTCACATAGGAGGACTCCATTCAAAAACAGATTCTTCCTaGTTTGTGCAAATGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: VLNGVSTHRRTHIGGLHSKTDSS*FVQMLL Trigger: CAGAAGCATTTGCACAAAGCAGGAAGAATCTGTTTT...TGAATGGAGTCCTCCTATGTGAGTCCTCCTATGTGTGGAGACACCATTAAGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCATTTTAAAAAGTGTACAGTCAACCCAGAGATCTTCACTGTAGTGAATGGTGCACTCATTGTGGTGTaGGCAGCCCCCTTTTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: IHFKKCTVNPEIFTVVNGALIVV*AAPFFC Trigger: ACAGAAAAAGGGGGCTGCGCACACCACAATGAGTGC...ACCATTCACTACAGTGAAGATCTCTGGGTTGACTGTACACTTTTTAAAATGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCTTAATGGTGTCTCCACACATAGGAGGACTCACATAGGAGGACTCCATTCACAAAACGACTCAGTTTaGATAATGGACTACATAACC | + |
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Preference number: 2 (lower is better) Translates to: VLNGVSTHRRTHIGGLHSQNDSV*IMDYIT Trigger: GGTTATGTAGTCCATTATCCAAACTGAGTCGTTTTG...TGAATGGAGTCCTCCTATGTGAGTCCTCCTATGTGTGGAGACACCATTAAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | CACATACACACACACACACACAAAATGAACAGTGCTGTATCAATTCCAGAAAATCATGGTCTTGATAACTaGCTCTGGAACTTCTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: HIHTHTHKMNSAVSIPENHGLDN*LWNFSA Trigger: AGCCGAGAAGTTCCAGAGTCAGTTATCAAGACCATG...ATTTTCTGGAATTGATACAGCACTGTTCATTTTGTGTGTGTGTGTGTGTATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGTAGTGAATGGTGGATGTATTAAAGAACACCAGAGAAAAACTGCTGAGCTCACATACGCTTCTTCTTaGTTCAGTACTGAGGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: TVVNGGCIKEHQRKTAELTYASS*FSTEEV Trigger: CACTTCCTCAGTACTGAATCAAGAAGAAGCGTATGT...GAGCTCAGCAGTTTTTCTCTGGTGTTCTTTAATACATCCACCATTCACTACAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGAAGCCAATGGATAATAGCAGCAGGAAAATCATGGTCTTGATAACTGACCACATGGTCATGGTATaGCACACCCATAAATGTACT | + |
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Preference number: 2 (lower is better) Translates to: TEKPMDNSSRKIMVLITDHMVMV*HTHKCT Trigger: AGTACATTTATGGGTGTGGCATACCATGACCATGTG...GTCAGTTATCAAGACCATGATTTTCCTGCTGCTATTATCCATTGGCTTCTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCTTAATGGTGTCTCCACACATAGGAGGACTCACATAGGAGGACTCCATTCATCTGAATATAATGCATaGATACAATACATGACCGGA | + |
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Preference number: 2 (lower is better) Translates to: VLNGVSTHRRTHIGGLHSSEYNA*IQYMTG Trigger: TCCGGTCATGTATTGTATCCATGCATTATATTCAGA...TGAATGGAGTCCTCCTATGTGAGTCCTCCTATGTGTGGAGACACCATTAAGAAC 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGATCTTCACTGTAGTGAATGGTGGATGTATTAAAGAACACCAGAGAAAAGTGCAGGAAGATCATTaGGCAGAAAACTTTCCACCT | + |
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Preference number: 2 (lower is better) Translates to: PEIFTVVNGGCIKEHQRKVQEDH*AENFPP Trigger: AGGTGGAAAGTTTTCTGCCCAATGATCTTCCTGCAC...TTTTCTCTGGTGTTCTTTAATACATCCACCATTCACTACAGTGAAGATCTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
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| 3UTR-3UTR CCA 90 bp | AACAACAGGGAAAACAGATTCTTCCTGCTTTGTGCAAATGCTTCTGAGCTAGAATGTGTTTCCAGAGTTTaGCAGCAAGTCTTGATACAC | + |
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Preference number: 2 (lower is better) Translates to: NNRENRFFLLCANASELECVSRV*QQVLIH Trigger: GTGTATCAAGACTTGCTGCCAAACTCTGGAAACACA...TTCTAGCTCAGAAGCATTTGCACAAAGCAGGAAGAATCTGTTTTCCCTGTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
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| 3UTR CAA 90 bp | ATGAACAGTGCTGTATCAATTCCAGAAAATAGCGCATGCTTGTATTaGAAGGCAAAAGTCTGGATGAAGAGAGAGACAAAGGCTTACAGA | + |
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Preference number: 2 (lower is better) Translates to: MNSAVSIPENSACLY*KAKVWMKRETKAYR Trigger: TCTGTAAGCCTTTGTCTCTCTCTTCATCCAGACTTTTGCCTTCAAATACAAGCATGCGCTATTTTCTGGAATTGATACAGCACTGTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGCTTACAGAGAATGAATTGAATAACTTGAGATTCCCTGGATCCAAACATGACTTTCCATCTCAGTaGTCATTTGGTTGTCGATGG | + |
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Preference number: 2 (lower is better) Translates to: QRLTENELNNLRFPGSKHDFPSQ*SFGCRW Trigger: CCATCGACAACCAAATGATCACTGAGATGGAAAGTC...ATGTTTGGATCCAGGGAATCTCAAGTTATTCAATTCATTCTCTGTAAGCCTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGTAGTGAATGGTGGATGTATTAAAGAACACCAGAGAAAAACTGCTGAGCTCGATTTCTTAGAATGCTaGAGATGTGTAGCAAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: TVVNGGCIKEHQRKTAELDFLEC*RCVARS Trigger: TGACCTTGCTACACATCTTCAGCATTCTAAGAAATC...GAGCTCAGCAGTTTTTCTCTGGTGTTCTTTAATACATCCACCATTCACTACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAATAGCGCATGCTTGTATTTGAAGGCAAAAGTCTGGATGAAGAGAGAGACAGATTTCTTAGAATGCTaGAGATGTGTAGCAAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: ENSACLYLKAKVWMKRETDFLEC*RCVARS Trigger: TGACCTTGCTACACATCTTCAGCATTCTAAGAAATC...TGTCTCTCTCTTCATCCAGACTTTTGCCTTCAAATACAAGCATGCGCTATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | ACACATAGGAGGACTCACATAGGAGGACTCCATTCACTGTTAAATGTTGAACTCGCTAGAAGAGCAAAATaGTTTCTTAGAATGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: THRRTHIGGLHSLLNVELARRAK*FLRMLK Trigger: CTTCAGCATTCTAAGAAATCATTTTGCTCTTCTAGC...GAGTTCAACATTTAACAGTGAATGGAGTCCTCCTATGTGAGTCCTCCTATGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGATCTTCACTGTAGTGAATGGTGGATGTATTAAAGAACACCAGAGAAAACTTAGTGGTGATGTTTaGCACTCAACAATAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: PEIFTVVNGGCIKEHQRKLSGDV*HSTIGQ Trigger: CTGTCCTATTGTTGAGTGTCAAACATCACCACTAAG...TTTTCTCTGGTGTTCTTTAATACATCCACCATTCACTACAGTGAAGATCTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | CACATACACACACACACACACAAAATGAACAGTGCTGTATCAATTCCAGAAAATTTTTCCCACTTCCTTTaGCACATGGTCATGGTATGC | + |
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Preference number: 2 (lower is better) Translates to: HIHTHTHKMNSAVSIPENFSHFL*HMVMVC Trigger: GCATACCATGACCATGTGTCAAAGGAAGTGGGAAAA...ATTTTCTGGAATTGATACAGCACTGTTCATTTTGTGTGTGTGTGTGTGTATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR GCA 90 bp | ACACACACACACACACATACACACACACACACACAAAATGAACAGTGCTGTATCTTGACATCTCTGTTTTaGATATTGTCTCTGACCAAG | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTHTHTQNEQCCILTSLF*ILSLTK Trigger: CTTGGTCAGAGACAATATGCAAAACAGAGATGTCAA...GATACAGCACTGTTCATTTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAATAGCGCATGCTTGTATTTGAAGGCAAAAGTCTGGATGAAGAGAGAGACATGCCTCATCTGTAGCTaGAAGAAAAATTTGGATATC | + |
|
Preference number: 2 (lower is better) Translates to: ENSACLYLKAKVWMKRETCLICS*KKNLDI Trigger: GATATCCAAATTTTTCTTTCAGCTACAGATGAGGCA...TGTCTCTCTCTTCATCCAGACTTTTGCCTTCAAATACAAGCATGCGCTATTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR-3UTR GCA 90 bp | CACAAAATGAACAGTGCTGTATCAATTCCAGAAAATAGCGCATGCTTGTATTTGCACATGGTCATGGTATaGCACACCCATAAATGTACT | + |
|
Preference number: 2 (lower is better) Translates to: HKMNSAVSIPENSACLYLHMVMV*HTHKCT Trigger: AGTACATTTATGGGTGTGGCATACCATGACCATGTG...CAAATACAAGCATGCGCTATTTTCTGGAATTGATACAGCACTGTTCATTTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCATGTTCATCCCTATAGCCACTTTAAGTAAAATGACCATCCATCCACATCTCAAAACAGATTCTTCCTaGTTTGTGCAAATGCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: FMFIPIATLSKMTIHPHLKTDSS*FVQMLL Trigger: CAGAAGCATTTGCACAAAGCAGGAAGAATCTGTTTT...GAGATGTGGATGGATGGTCATTTTACTTAAAGTGGCTATAGGGATGAACATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR-3UTR GCA 90 bp | CACATACACACACACACACACAAAATGAACAGTGCTGTATCAATTCCAGAAAATCCAGTAATGTTACATTaGATGCAGTCCCTGAGAATA | + |
|
Preference number: 2 (lower is better) Translates to: HIHTHTHKMNSAVSIPENPVMLH*MQSLRI Trigger: TATTCTCAGGGACTGCATGCAATGTAACATTACTGG...ATTTTCTGGAATTGATACAGCACTGTTCATTTTGTGTGTGTGTGTGTGTATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCAAAACGACTCAGTTTGGATAATGGACTACATAACCATCCACTTAGTGGTCAAAACGACTCAGTTTaGATAATGGACTACATAACC | + |
|
Preference number: 2 (lower is better) Translates to: FPKRLSLDNGLHNHPLSGQNDSV*IMDYIT Trigger: GGTTATGTAGTCCATTATCCAAACTGAGTCGTTTTG...ACCACTAAGTGGATGGTTATGTAGTCCATTATCCAAACTGAGTCGTTTTGGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR CAA 90 bp | AGAATTTTAATGCTAAGGCACCCAACCACAGTATCTTTCAGTTATTaGTTGTTTTCTTCAGGAGATTGGTTATACACAGCAGGGATTCAA | + |
|
Preference number: 2 (lower is better) Translates to: RILMLRHPTTVSFSY*LFSSGDWLYTAGIQ Trigger: TTGAATCCCTGCTGTGTATAACCAATCTCCTGAAGAAAACAACAAATAACTGAAAGATACTGTGGTTGGGTGCCTTAGCATTAAAATTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR-3UTR GCA 90 bp | CACATACACACACACACACACAAAATGAACAGTGCTGTATCAATTCCAGAAAATCGGCTTCTAACTCATTaGTTCTTGAGTTTGTTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: HIHTHTHKMNSAVSIPENRLLTH*FLSLFS Trigger: TGAAAACAAACTCAAGAAGCAATGAGTTAGAAGCCG...ATTTTCTGGAATTGATACAGCACTGTTCATTTTGTGTGTGTGTGTGTGTATGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTCATTTTAAAAAGTGTACAGTCAACCCAGAGATCTTCACTGTAGTGAATGGTTGCCTCATCTGTAGCTaGAAGAAAAATTTGGATATC | + |
|
Preference number: 2 (lower is better) Translates to: IHFKKCTVNPEIFTVVNGCLICS*KKNLDI Trigger: GATATCCAAATTTTTCTTTCAGCTACAGATGAGGCA...ACCATTCACTACAGTGAAGATCTCTGGGTTGACTGTACACTTTTTAAAATGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR GCA 72 bp | GGCTCTGTGTCCCTGTGTCTCCAACTCCTCTGGCTGTaGAGGAAGATCATTGGGCAGAAAACTTTCCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: GSVSLCLQLLWL*RKIIGQKTFHL Trigger: GAGGTGGAAAGTTTTCTGCCCAATGATCTTCCTGCACAGCCAGAGGAGTTGGAGACACAGGGACACAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| 3UTR CCA 72 bp | ACCATCTCTGTAGTCAGGGGACCTAGAGGAAAGGAGTaGAGGGGCATTGCAGGTACTCAGATTTCTAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TISVVRGPRGKE*RGIAGTQISSQ Trigger: CTGGCTAGAAATCTGAGTACCTGCAATGCCCCTCCACTCCTTTCCTCTAGGTCCCCTGACTACAGAGATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| 3UTR TCA 72 bp | TCCACCTCGTCCCTGGCTTCAACGCCTTTCACCTCATaGATCTGGCAGTCCAGGAAACTTTCGGGATTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: STSSLASTPFTS*IWQSRKLSGLK Trigger: TTTCAATCCCGAAAGTTTCCTGGACTGCCAGATTCATGAGGTGAAAGGCGTTGAAGCCAGGGACGAGGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| 3UTR TCA 72 bp | ACTGGTATCAGGATTCCCGACTGGAAAGGCAATGGTTaGGGGACAGGGACAGGGACATTTGTGTTTCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TGIRIPDWKGNG*GTGTGTFVFPE Trigger: CTCTGGAAACACAAATGTCCCTGTCCCTGTCCCTCAACCATTGCCTTTCCAGTCGGGAATCCTGATACCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| 3UTR CCA 72 bp | GAAGATCATTGGGCAGAAAACTTTCCACCTCGTCCCTaGCTTCAACGCCTTTCACCTCATGAATCTGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: EDHWAENFPPRP*LQRLSPHESGS Trigger: ACTGCCAGATTCATGAGGTGAAAGGCGTTGAAGCCAGGGACGAGGTGGAAAGTTTTCTGCCCAATGATCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| 3UTR CCA 72 bp | AGAAACTGGTATCAGGATTCCCGACTGGAAAGGCAATaGTTGAGGGACAGGGACAGGGACATTTGTGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: RNWYQDSRLERQ*LRDRDRDICVS Trigger: GGAAACACAAATGTCCCTGTCCCTGTCCCTCAACCATTGCCTTTCCAGTCGGGAATCCTGATACCAGTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| 3UTR CCA 72 bp | ACGCTTCTTCTTGATTCAGTACTGAGGAAGTGGAGATaGGCTGTCTCTGAGAAACTGGTATCAGGATTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: TLLLDSVLRKWR*AVSEKLVSGFP Trigger: CGGGAATCCTGATACCAGTTTCTCAGAGACAGCCCATCTCCACTTCCTCAGTACTGAATCAAGAAGAAGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTTAATGGTGTCTCCACACATAGGAGGACTCACATAGGAGGACTCCATTCAAGGAGTGGAGGGGCATaGCAGGTACTCAGATTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: VLNGVSTHRRTHIGGLHSRSGGA*QVLRFL Trigger: TAGAAATCTGAGTACCTGCAATGCCCCTCCACTCCT...TGAATGGAGTCCTCCTATGTGAGTCCTCCTATGTGTGGAGACACCATTAAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| 3UTR-3UTR CAA 90 bp | AGATTTCTAGCCAGGCATCTTAAGGGTGACTCTCTTCTAACTGTTTCTGGTGGGTGTAGCAAGGTCACGTaGACTTTCTCTTCTGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RFLARHLKGDSLLTVSGGCSKVT*TFSSVS Trigger: GCTCACAGAAGAGAAAGTCAACGTGACCTTGCTACA...CCCACCAGAAACAGTTAGAAGAGAGTCACCCTTAAGATGCCTGGCTAGAAATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTTAATGGTGTCTCCACACATAGGAGGACTCACATAGGAGGACTCCATTCAGTTTGGCAGCAAGTCTaGATACACAGGAGGCCTATT | + |
|
Preference number: 3 (lower is better) Translates to: VLNGVSTHRRTHIGGLHSVWQQV*IHRRPI Trigger: AATAGGCCTCCTGTGTATCAAGACTTGCTGCCAAAC...TGAATGGAGTCCTCCTATGTGAGTCCTCCTATGTGTGGAGACACCATTAAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| 3UTR TCA 72 bp | GGGACATTTGTGTTTCCAGAGTTTGGCAGCAAGTCTTaGTACACAGGAGGCCTATTTCTGTCACCATCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GTFVFPEFGSKS*YTGGLFLSPSL Trigger: CAGAGATGGTGACAGAAATAGGCCTCCTGTGTATCAAGACTTGCTGCCAAACTCTGGAAACACAAATGTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| 3UTR TCA 72 bp | AGACATGGTGACATACGCTTCTTCTTGATTCAGTACTaGGGAAGTGGAGATGGGCTGTCTCTGAGAAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: RHGDIRFFLIQY*GSGDGLSLRNW Trigger: CCAGTTTCTCAGAGACAGCCCATCTCCACTTCCTCAGTACTGAATCAAGAAGAAGCGTATGTCACCATGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGGCTTACAGAGAATGAATTGAATAACTTGAGATTCCCTGGATCCAAACATCTGGAAAGGCAATGGTaGAGGGACAGGGACAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: QRLTENELNNLRFPGSKHLERQW*RDRDRD Trigger: GTCCCTGTCCCTGTCCCTCAACCATTGCCTTTCCAG...ATGTTTGGATCCAGGGAATCTCAAGTTATTCAATTCATTCTCTGTAAGCCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACACACACACACACATACACACACACACACACAAAATGAACAGTGCTGTATCAAGAGAGGGTTGAAGTaGGAATGTGTGCCTCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: THTHTHTHTHTQNEQCCIKRGLK*ECVPHL Trigger: CAGATGAGGCACACATTCCAACTTCAACCCTCTCTT...GATACAGCACTGTTCATTTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAGATCTTCACTGTAGTGAATGGTGGATGTATTAAAGAACACCAGAGAAAATGTGCAGGAAGATCATaGGGCAGAAAACTTTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: PEIFTVVNGGCIKEHQRKCAGRS*GRKLST Trigger: GGTGGAAAGTTTTCTGCCCAATGATCTTCCTGCACA...TTTTCTCTGGTGTTCTTTAATACATCCACCATTCACTACAGTGAAGATCTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACATAGGAGGACTCACATAGGAGGACTCCATTCACTGTTAAATGTTGAACTCACCCATAAATGTACTTaGTCCTTCATGTTCATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: THRRTHIGGLHSLLNVELTHKCT*SFMFIP Trigger: AGGGATGAACATGAAGGACAAAGTACATTTATGGGT...GAGTTCAACATTTAACAGTGAATGGAGTCCTCCTATGTGAGTCCTCCTATGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTAGTGAATGGTGGATGTATTAAAGAACACCAGAGAAAAACTGCTGAGCTCACCAGTAATGTTACATaGCATGCAGTCCCTGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TVVNGGCIKEHQRKTAELTSNVT*HAVPEN Trigger: ATTCTCAGGGACTGCATGCAATGTAACATTACTGGT...GAGCTCAGCAGTTTTTCTCTGGTGTTCTTTAATACATCCACCATTCACTACAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACACACACACACACATACACACACACACACACAAAATGAACAGTGCTGTATCATACCAAGAGGAAAATaGGCAGAACCAACCAGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: THTHTHTHTHTQNEQCCIIPRGK*AEPTSN Trigger: ATTACTGGTTGGTTCTGCCAATTTTCCTCTTGGTAT...GATACAGCACTGTTCATTTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCATTTTAAAAAGTGTACAGTCAACCCAGAGATCTTCACTGTAGTGAATGGTTGTAGCAAGGTCACGTaGACTTTCTCTTCTGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: IHFKKCTVNPEIFTVVNGCSKVT*TFSSVS Trigger: GCTCACAGAAGAGAAAGTCAACGTGACCTTGCTACA...ACCATTCACTACAGTGAAGATCTCTGGGTTGACTGTACACTTTTTAAAATGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAGAAGCCAATGGATAATAGCAGCAGGAAAATCATGGTCTTGATAACTGACCCAAAACGACTCAGTTaGGATAATGGACTACATAAC | + |
|
Preference number: 3 (lower is better) Translates to: TEKPMDNSSRKIMVLITDPKRLS*DNGLHN Trigger: GTTATGTAGTCCATTATCCAAACTGAGTCGTTTTGG...GTCAGTTATCAAGACCATGATTTTCCTGCTGCTATTATCCATTGGCTTCTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTAGTGAATGGTGGATGTATTAAAGAACACCAGAGAAAAACTGCTGAGCTCTCGGCTTCTAACTCATaGCTTCTTGAGTTTGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: TVVNGGCIKEHQRKTAELSASNS*LLEFVF Trigger: GAAAACAAACTCAAGAAGCAATGAGTTAGAAGCCGA...GAGCTCAGCAGTTTTTCTCTGGTGTTCTTTAATACATCCACCATTCACTACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR GCA 72 bp | GTGCTGAACTGTAGAGCCCATTTATTTACATGTAGTTaGCACAGTTACAGAGAGTATTTTAGCCACAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: VLNCRAHLFTCS*HSYREYFSHRV Trigger: TACTCTGTGGCTAAAATACTCTCTGTAACTGTGGCAACTACATGTAAATAAATGGGCTCTACAGTTCAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCATGTTCATCCCTATAGCCACTTTAAGTAAAATGACCATCCATCCACATCTCACCCATAAATGTACTTaGTCCTTCATGTTCATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FMFIPIATLSKMTIHPHLTHKCT*SFMFIP Trigger: AGGGATGAACATGAAGGACAAAGTACATTTATGGGT...GAGATGTGGATGGATGGTCATTTTACTTAAAGTGGCTATAGGGATGAACATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR-3UTR CAA 90 bp | CACAAAATGAACAGTGCTGTATCAATTCCAGAAAATAGCGCATGCTTGTATTTGGTTTTCTTCAGGAGATaGGTTATACACAGCAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: HKMNSAVSIPENSACLYLVFFRR*VIHSRD Trigger: ATCCCTGCTGTGTATAACCAATCTCCTGAAGAAAAC...CAAATACAAGCATGCGCTATTTTCTGGAATTGATACAGCACTGTTCATTTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR GCA 72 bp | ATGAACAGTGCTGTATCAATTCCAGAAAATAGCGCATaGTTGTATTTGAAGGCAAAAGTCTGGATGAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: MNSAVSIPENSA*LYLKAKVWMKR Trigger: TCTCTTCATCCAGACTTTTGCCTTCAAATACAAGCATGCGCTATTTTCTGGAATTGATACAGCACTGTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGGCTTACAGAGAATGAATTGAATAACTTGAGATTCCCTGGATCCAAACATCCAAAACGACTCAGTTaGGATAATGGACTACATAAC | + |
|
Preference number: 3 (lower is better) Translates to: QRLTENELNNLRFPGSKHPKRLS*DNGLHN Trigger: GTTATGTAGTCCATTATCCAAACTGAGTCGTTTTGG...ATGTTTGGATCCAGGGAATCTCAAGTTATTCAATTCATTCTCTGTAAGCCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGGCTTACAGAGAATGAATTGAATAACTTGAGATTCCCTGGATCCAAACATAGGAAAATCATGGTCTaGATAACTGACTCTGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: QRLTENELNNLRFPGSKHRKIMV*ITDSGT Trigger: AGTTCCAGAGTCAGTTATCAAGACCATGATTTTCCT...ATGTTTGGATCCAGGGAATCTCAAGTTATTCAATTCATTCTCTGTAAGCCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR-3UTR CAA 90 bp | CACAAAATGAACAGTGCTGTATCAATTCCAGAAAATAGCGCATGCTTGTATTTGATACCAAGAGGAAAATaGGCAGAACCAACCAGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: HKMNSAVSIPENSACLYLIPRGK*AEPTSN Trigger: ATTACTGGTTGGTTCTGCCAATTTTCCTCTTGGTAT...CAAATACAAGCATGCGCTATTTTCTGGAATTGATACAGCACTGTTCATTTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR CCA 72 bp | AGCAAGCATTCCAGACTTTCCATCTCAGTGATCATTTaGTTGTCGATGGAAGGGTTTTCTTATAATTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: SKHSRLSISVII*LSMEGFSYNSF Trigger: AAATGAATTATAAGAAAACCCTTCCATCGACAACCAAATGATCACTGAGATGGAAAGTCTGGAATGCTTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCATTTTAAAAAGTGTACAGTCAACCCAGAGATCTTCACTGTAGTGAATGGTCTTGACATCTCTGTTTaGCATATTGTCTCTGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: IHFKKCTVNPEIFTVVNGLDISV*HIVSDQ Trigger: TTGGTCAGAGACAATATGCAAAACAGAGATGTCAAG...ACCATTCACTACAGTGAAGATCTCTGGGTTGACTGTACACTTTTTAAAATGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR CAA 72 bp | TGTGTCTCCAACTCCTCTGGCTGTGCAGGAAGATCATaGGGCAGAAAACTTTCCACCTCGTCCCTGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CVSNSSGCAGRS*GRKLSTSSLAS Trigger: TGAAGCCAGGGACGAGGTGGAAAGTTTTCTGCCCAATGATCTTCCTGCACAGCCAGAGGAGTTGGAGACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| CDS-3UTR CCA 90 bp | ACTTTCCACCTCGTCCCTGGCTTCAACGCCTTTCACCTCATGAATCTGGCAGTCTCTAGGTCTCCATCCTaGGCATTTCCACTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TFHLVPGFNAFHLMNLAVSRSPS*AFPLSP Trigger: TGGAGAAAGTGGAAATGCCCAGGATGGAGACCTAGA...GACTGCCAGATTCATGAGGTGAAAGGCGTTGAAGCCAGGGACGAGGTGGAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| 3UTR CAA 72 bp | GAGGGACAGGGACAGGGACATTTGTGTTTCCAGAGTTaGGCAGCAAGTCTTGATACACAGGAGGCCTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGQGQGHLCFQS*AASLDTQEAYF Trigger: GAAATAGGCCTCCTGTGTATCAAGACTTGCTGCCAAACTCTGGAAACACAAATGTCCCTGTCCCTGTCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| 3UTR CAA 72 bp | GGAAAGGCAATGGTTGAGGGACAGGGACAGGGACATTaGTGTTTCCAGAGTTTGGCAGCAAGTCTTGATACA | + |
|
Preference number: 4 (lower is better) Translates to: GKAMVEGQGQGH*CFQSLAASLDT Trigger: TGTATCAAGACTTGCTGCCAAACTCTGGAAACACAAATGTCCCTGTCCCTGTCCCTCAACCATTGCCTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACACACATACACACACACACACACAAAATGAACAGTGCTGTATCCAACTCCTCTGGCTGTaGAGGAAGATCATTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTQNEQCCIQLLWL*RKIIGQ Trigger: CTGCCCAATGATCTTCCTGCACAGCCAGAGGAGTTG...GATACAGCACTGTTCATTTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003981.6 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACACATACACACACACACACACAAAATGAACAGTGCTGTATCCCTAGAGGAAAGGAGTaGAGGGGCATTGCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTQNEQCCIPRGKE*RGIAGT Trigger: AGTACCTGCAATGCCCCTCCACTCCTTTCCTCTAGG...GATACAGCACTGTTCATTTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003981.6 |
||
| CDS-3UTR TCA 90 bp | ACACATAGGAGGACTCACATAGGAGGACTCCATTCACTGTTAAATGTTGAACTCGGATCCCATCCTCCTTaGTTCTTGGGTTCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: THRRTHIGGLHSLLNVELGSHPP*FLGSGV Trigger: AACTCCAGAACCCAAGAATCAAGGAGGATGGGATCC...GAGTTCAACATTTAACAGTGAATGGAGTCCTCCTATGTGAGTCCTCCTATGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR TCA 90 bp | CACATACACACACACACACACAAAATGAACAGTGCTGTATCAATTCCAGAAAATCTGTTTCTGGTGGGCTaGCTGAAGTCTCAGGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HIHTHTHKMNSAVSIPENLFLVG*LKSQAS Trigger: GCTCGCCTGAGACTTCAGTCAGCCCACCAGAAACAG...ATTTTCTGGAATTGATACAGCACTGTTCATTTTGTGTGTGTGTGTGTGTATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003981.6 |
||
| CDS-3UTR CCA 90 bp | CCAGAGATCTTCACTGTAGTGAATGGTGGATGTATTAAAGAACACCAGAGAAAACCATCCACTTCCAACTaGCTGTGGCACCAGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PEIFTVVNGGCIKEHQRKPSTSN*LWHQKE Trigger: CTCCTTCTGGTGCCACAGCCAGTTGGAAGTGGATGG...TTTTCTCTGGTGTTCTTTAATACATCCACCATTCACTACAGTGAAGATCTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR CAA 72 bp | TTTCTTAGAATGCTGAAGATGTGTAGCAAGGTCACGTaGACTTTCTCTTCTGTGAGCTACGGGGGAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLRMLKMCSKVT*TFSSVSYGGEQ Trigger: TTGCTCTCCCCCGTAGCTCACAGAAGAGAAAGTCAACGTGACCTTGCTACACATCTTCAGCATTCTAAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR TCA 90 bp | ACACATAGGAGGACTCACATAGGAGGACTCCATTCACTGTTAAATGTTGAACTCTCCAGAGTTTTCTTATaGTCGGGGAGACTAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: THRRTHIGGLHSLLNVELSRVFL*SGRLGH Trigger: ATGGCCTAGTCTCCCCGATCATAAGAAAACTCTGGA...GAGTTCAACATTTAACAGTGAATGGAGTCCTCCTATGTGAGTCCTCCTATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR CCA 90 bp | CACATACACACACACACACACAAAATGAACAGTGCTGTATCAATTCCAGAAAATCCATCCACTTCCAACTaGCTGTGGCACCAGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HIHTHTHKMNSAVSIPENPSTSN*LWHQKE Trigger: CTCCTTCTGGTGCCACAGCCAGTTGGAAGTGGATGG...ATTTTCTGGAATTGATACAGCACTGTTCATTTTGTGTGTGTGTGTGTGTATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTAGTGAATGGTGGATGTATTAAAGAACACCAGAGAAAAACTGCTGAGCTCCAGAATGGTGACACTTaGCAAGACAGGATCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TVVNGGCIKEHQRKTAELQNGDT*QDRIPS Trigger: GGATGGGATCCTGTCTTGCCAAGTGTCACCATTCTG...GAGCTCAGCAGTTTTTCTCTGGTGTTCTTTAATACATCCACCATTCACTACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAGAAGCCAATGGATAATAGCAGCAGGAAAATCATGGTCTTGATAACTGACCGCTCCAGAAGCCTTTaGAGTAATCGTTATGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEKPMDNSSRKIMVLITDRSRSL*SNRYGE Trigger: TTCCCCATAACGATTACTTCAAAGGCTTCTGGAGCG...GTCAGTTATCAAGACCATGATTTTCCTGCTGCTATTATCCATTGGCTTCTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR TCA 90 bp | AACAACAGGGAAAACAGATTCTTCCTGCTTTGTGCAAATGCTTCTGAGCTAGAACGCTCCAGAAGCCTTTaGAGTAATCGTTATGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NNRENRFFLLCANASELERSRSL*SNRYGE Trigger: TTCCCCATAACGATTACTTCAAAGGCTTCTGGAGCG...TTCTAGCTCAGAAGCATTTGCACAAAGCAGGAAGAATCTGTTTTCCCTGTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCTTTCCAAAACGACTCAGTTTGGATAATGGACTACATAACCATCCACTTTGGAAAGGCAATGGTTaGGGGACAGGGACAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FFFPKRLSLDNGLHNHPLWKGNG*GTGTGT Trigger: TGTCCCTGTCCCTGTCCCTCAACCATTGCCTTTCCA...AAGTGGATGGTTATGTAGTCCATTATCCAAACTGAGTCGTTTTGGAAAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003981.6 |
||
| CDS-3UTR CCA 90 bp | GAAAATAGCGCATGCTTGTATTTGAAGGCAAAAGTCTGGATGAAGAGAGAGACATGTCTCCAACTCCTCTaGCTGTGCAGGAAGATCATT | + |
|
Preference number: 4 (lower is better) Translates to: ENSACLYLKAKVWMKRETCLQLL*LCRKII Trigger: AATGATCTTCCTGCACAGCCAGAGGAGTTGGAGACA...TGTCTCTCTCTTCATCCAGACTTTTGCCTTCAAATACAAGCATGCGCTATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003981.6 |
||
| CDS-3UTR TCA 90 bp | GTTCTTAATGGTGTCTCCACACATAGGAGGACTCACATAGGAGGACTCCATTCAGAATGGATCGGACTTTaGTTTCATACATTGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLNGVSTHRRTHIGGLHSEWIGL*FHTLLL Trigger: CAAAAGCAATGTATGAAATCAAAGTCCGATCCATTC...TGAATGGAGTCCTCCTATGTGAGTCCTCCTATGTGTGGAGACACCATTAAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR CCA 90 bp | CACAAAATGAACAGTGCTGTATCAATTCCAGAAAATAGCGCATGCTTGTATTTGCAGAATGGTGACACTTaGCAAGACAGGATCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: HKMNSAVSIPENSACLYLQNGDT*QDRIPS Trigger: GGATGGGATCCTGTCTTGCCAAGTGTCACCATTCTG...CAAATACAAGCATGCGCTATTTTCTGGAATTGATACAGCACTGTTCATTTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR CAA 72 bp | CACATGGTCATGGTATGCCACACCCATAAATGTACTTaGTCCTTCATGTTCATCCCTATAGCCACTTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HMVMVCHTHKCT*SFMFIPIATLS Trigger: ACTTAAAGTGGCTATAGGGATGAACATGAAGGACAAAGTACATTTATGGGTGTGGCATACCATGACCATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR CAA 72 bp | AAGCCAATGGATAATAGCAGCAGGAAAATCATGGTCTaGATAACTGACTCTGGAACTTCTCGGCTTCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: KPMDNSSRKIMV*ITDSGTSRLLT Trigger: AGTTAGAAGCCGAGAAGTTCCAGAGTCAGTTATCAAGACCATGATTTTCCTGCTGCTATTATCCATTGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR TCA 90 bp | ATTCATTTTAAAAAGTGTACAGTCAACCCAGAGATCTTCACTGTAGTGAATGGTGGATCCCATCCTCCTTaGTTCTTGGGTTCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IHFKKCTVNPEIFTVVNGGSHPP*FLGSGV Trigger: AACTCCAGAACCCAAGAATCAAGGAGGATGGGATCC...ACCATTCACTACAGTGAAGATCTCTGGGTTGACTGTACACTTTTTAAAATGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR TCA 90 bp | TTCATGTTCATCCCTATAGCCACTTTAAGTAAAATGACCATCCATCCACATCTCACAAACTCAGAATGGTaGCACTTGGCAAGACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FMFIPIATLSKMTIHPHLTNSEW*HLARQD Trigger: ATCCTGTCTTGCCAAGTGTCACCATTCTGAGTTTGT...GAGATGTGGATGGATGGTCATTTTACTTAAAGTGGCTATAGGGATGAACATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR TCA 90 bp | CACATACACACACACACACACAAAATGAACAGTGCTGTATCAATTCCAGAAAATTCCAGAGTTTTCTTATaGTCGGGGAGACTAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HIHTHTHKMNSAVSIPENSRVFL*SGRLGH Trigger: ATGGCCTAGTCTCCCCGATCATAAGAAAACTCTGGA...ATTTTCTGGAATTGATACAGCACTGTTCATTTTGTGTGTGTGTGTGTGTATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTAGTGAATGGTGGATGTATTAAAGAACACCAGAGAAAAACTGCTGAGCTCTGGAATAAAGATACATaGGTCCAGTTGCTTTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: TVVNGGCIKEHQRKTAELWNKDT*VQLLSP Trigger: GGGTGAAAGCAACTGGACGCATGTATCTTTATTCCA...GAGCTCAGCAGTTTTTCTCTGGTGTTCTTTAATACATCCACCATTCACTACAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR CCA 90 bp | TTCATGTTCATCCCTATAGCCACTTTAAGTAAAATGACCATCCATCCACATCTCGTGCAGGAAGATCATTaGGCAGAAAACTTTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FMFIPIATLSKMTIHPHLVQEDH*AENFPP Trigger: AGGTGGAAAGTTTTCTGCCCAATGATCTTCCTGCAC...GAGATGTGGATGGATGGTCATTTTACTTAAAGTGGCTATAGGGATGAACATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003981.6 |
||
| CDS-3UTR TCA 90 bp | GAAAATAGCGCATGCTTGTATTTGAAGGCAAAAGTCTGGATGAAGAGAGAGACACAAGTCAATAAATGTTaGCTTCCATCCACTTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ENSACLYLKAKVWMKRETQVNKC*LPSTSN Trigger: GTTGGAAGTGGATGGAAGTCAACATTTATTGACTTG...TGTCTCTCTCTTCATCCAGACTTTTGCCTTCAAATACAAGCATGCGCTATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR TCA 90 bp | CACAAAATGAACAGTGCTGTATCAATTCCAGAAAATAGCGCATGCTTGTATTTGACAAACTCAGAATGGTaGCACTTGGCAAGACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HKMNSAVSIPENSACLYLTNSEW*HLARQD Trigger: ATCCTGTCTTGCCAAGTGTCACCATTCTGAGTTTGT...CAAATACAAGCATGCGCTATTTTCTGGAATTGATACAGCACTGTTCATTTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR CCA 90 bp | ATTCATTTTAAAAAGTGTACAGTCAACCCAGAGATCTTCACTGTAGTGAATGGTTCTAGGTCTCCATCCTaGGCATTTCCACTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IHFKKCTVNPEIFTVVNGSRSPS*AFPLSP Trigger: TGGAGAAAGTGGAAATGCCCAGGATGGAGACCTAGA...ACCATTCACTACAGTGAAGATCTCTGGGTTGACTGTACACTTTTTAAAATGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR CCA 90 bp | AACAACAGGGAAAACAGATTCTTCCTGCTTTGTGCAAATGCTTCTGAGCTAGAATTGATTCTTGGGTTCTaGAGTTTCGAAGGTAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: NNRENRFFLLCANASELELILGF*SFEGRT Trigger: AGTTCTACCTTCGAAACTCCAGAACCCAAGAATCAA...TTCTAGCTCAGAAGCATTTGCACAAAGCAGGAAGAATCTGTTTTCCCTGTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR CAA 72 bp | GCTGTATCAATTCCAGAAAATAGCGCATGCTTGTATTaGAAGGCAAAAGTCTGGATGAAGAGAGAGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AVSIPENSACLY*KAKVWMKRETK Trigger: CTTTGTCTCTCTCTTCATCCAGACTTTTGCCTTCAAATACAAGCATGCGCTATTTTCTGGAATTGATACAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR CAA 72 bp | AACAGTGCTGTATCAATTCCAGAAAATAGCGCATGCTaGTATTTGAAGGCAAAAGTCTGGATGAAGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NSAVSIPENSAC*YLKAKVWMKRE Trigger: CTCTCTCTTCATCCAGACTTTTGCCTTCAAATACAAGCATGCGCTATTTTCTGGAATTGATACAGCACTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR TCA 90 bp | TTTCCAAAACGACTCAGTTTGGATAATGGACTACATAACCATCCACTTAGTGGTAGCTGTGTTGATGTCTaGGTCATTAAAAGCACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FPKRLSLDNGLHNHPLSGSCVDV*VIKSTS Trigger: ACTTGTGCTTTTAATGACTCAGACATCAACACAGCT...ACCACTAAGTGGATGGTTATGTAGTCCATTATCCAAACTGAGTCGTTTTGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR TCA 90 bp | CACAAAATGAACAGTGCTGTATCAATTCCAGAAAATAGCGCATGCTTGTATTTGACATACGCTTCTTCTTaGTTCAGTACTGAGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HKMNSAVSIPENSACLYLTYASS*FSTEEV Trigger: CACTTCCTCAGTACTGAATCAAGAAGAAGCGTATGT...CAAATACAAGCATGCGCTATTTTCTGGAATTGATACAGCACTGTTCATTTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003981.6 |
||
| CDS-3UTR GCA 90 bp | ACAGAGAAGCCAATGGATAATAGCAGCAGGAAAATCATGGTCTTGATAACTGACGCTTCACACATATATTaGTGCTACCAATCAGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TEKPMDNSSRKIMVLITDASHIY*CYQSVR Trigger: TCTTACTGATTGGTAGCAGCAATATATGTGTGAAGC...GTCAGTTATCAAGACCATGATTTTCCTGCTGCTATTATCCATTGGCTTCTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR GCA 90 bp | ACACATAGGAGGACTCACATAGGAGGACTCCATTCACTGTTAAATGTTGAACTCAATCATTTGCTTCTTTaGGATAAACGACTTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: THRRTHIGGLHSLLNVELNHLLL*DKRLSG Trigger: ACCTGAAAGTCGTTTATCGCAAAGAAGCAAATGATT...GAGTTCAACATTTAACAGTGAATGGAGTCCTCCTATGTGAGTCCTCCTATGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR CAA 72 bp | ATGCTAAGGCACCCAACCACAGTATCTTTCAGTTATTaGTTGTTTTCTTCAGGAGATTGGTTATACACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MLRHPTTVSFSY*LFSSGDWLYTA Trigger: TGCTGTGTATAACCAATCTCCTGAAGAAAACAACAAATAACTGAAAGATACTGTGGTTGGGTGCCTTAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGGCTTACAGAGAATGAATTGAATAACTTGAGATTCCCTGGATCCAAACATAGCTGTGTTGATGTCTaGGTCATTAAAAGCACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QRLTENELNNLRFPGSKHSCVDV*VIKSTS Trigger: ACTTGTGCTTTTAATGACTCAGACATCAACACAGCT...ATGTTTGGATCCAGGGAATCTCAAGTTATTCAATTCATTCTCTGTAAGCCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR GCA 90 bp | CACACCCATAAATGTACTTTGTCCTTCATGTTCATCCCTATAGCCACTTTAAGTGCTTCACACATATATTaGTGCTACCAATCAGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HTHKCTLSFMFIPIATLSASHIY*CYQSVR Trigger: TCTTACTGATTGGTAGCAGCAATATATGTGTGAAGC...ACTTAAAGTGGCTATAGGGATGAACATGAAGGACAAAGTACATTTATGGGTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGGCTTACAGAGAATGAATTGAATAACTTGAGATTCCCTGGATCCAAACATTTGATTCTTGGGTTCTaGAGTTTCGAAGGTAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: QRLTENELNNLRFPGSKHLILGF*SFEGRT Trigger: AGTTCTACCTTCGAAACTCCAGAACCCAAGAATCAA...ATGTTTGGATCCAGGGAATCTCAAGTTATTCAATTCATTCTCTGTAAGCCTTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR CCA 90 bp | TTCATGTTCATCCCTATAGCCACTTTAAGTAAAATGACCATCCATCCACATCTCTTTTTCCATAGCACATaGGCTAAGATGACCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: FMFIPIATLSKMTIHPHLFFHST*AKMTNK Trigger: TTTGTTGGTCATCTTAGCCCATGTGCTATGGAAAAA...GAGATGTGGATGGATGGTCATTTTACTTAAAGTGGCTATAGGGATGAACATGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR TCA 90 bp | ATTCATTTTAAAAAGTGTACAGTCAACCCAGAGATCTTCACTGTAGTGAATGGTCAAGTCAATAAATGTTaGCTTCCATCCACTTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IHFKKCTVNPEIFTVVNGQVNKC*LPSTSN Trigger: GTTGGAAGTGGATGGAAGTCAACATTTATTGACTTG...ACCATTCACTACAGTGAAGATCTCTGGGTTGACTGTACACTTTTTAAAATGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCAAAACGACTCAGTTTGGATAATGGACTACATAACCATCCACTTAGTGGTATTGTTGTTCTTGTGTaGAATAAAGATACATGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FPKRLSLDNGLHNHPLSGIVVLV*NKDTCV Trigger: GACGCATGTATCTTTATTCCACACAAGAACAACAAT...ACCACTAAGTGGATGGTTATGTAGTCCATTATCCAAACTGAGTCGTTTTGGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGGCTTACAGAGAATGAATTGAATAACTTGAGATTCCCTGGATCCAAACATTTTTTCCATAGCACATaGGCTAAGATGACCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: QRLTENELNNLRFPGSKHFFHST*AKMTNK Trigger: TTTGTTGGTCATCTTAGCCCATGTGCTATGGAAAAA...ATGTTTGGATCCAGGGAATCTCAAGTTATTCAATTCATTCTCTGTAAGCCTTTG 37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR GCA 90 bp | CACATACACACACACACACACAAAATGAACAGTGCTGTATCAATTCCAGAAAATAATCATTTGCTTCTTTaGGATAAACGACTTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HIHTHTHKMNSAVSIPENNHLLL*DKRLSG Trigger: ACCTGAAAGTCGTTTATCGCAAAGAAGCAAATGATT...ATTTTCTGGAATTGATACAGCACTGTTCATTTTGTGTGTGTGTGTGTGTATGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| 3UTR CAA 72 bp | ATTATGTCTAACTTTTTCTTTCCAAAACGACTCAGTTaGGATAATGGACTACATAACCATCCACTTAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IMSNFFFPKRLS*DNGLHNHPLSG Trigger: ACCACTAAGTGGATGGTTATGTAGTCCATTATCCAAACTGAGTCGTTTTGGAAAGAAAAAGTTAGACATAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS CCA 90 bp | GACACTTGGCAAGACAGGATCCCATCCTCCTTGATTCTTGGGTTCTaGAGTTTCGAAGGTAGAACTTGGACTCCACTCGCTCCAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DTWQDRIPSSLILGF*SFEGRTWTPLAPEA Trigger: GGCTTCTGGAGCGAGTGGAGTCCAAGTTCTACCTTCGAAACTCCAGAACCCAAGAATCAAGGAGGATGGGATCCTGTCTTGCCAAGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTTAATGGTGTCTCCACACATAGGAGGACTCACATAGGAGGACTCCATTCAGATACATGCGTCCAGTaGCTTTCACCCCTTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLNGVSTHRRTHIGGLHSDTCVQ*LSPLAG Trigger: CCCAGCAAGGGGTGAAAGCAACTGGACGCATGTATC...TGAATGGAGTCCTCCTATGTGAGTCCTCCTATGTGTGGAGACACCATTAAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS CCA 90 bp | CCATCCTCCTTGATTCTTGGGTTCTGGAGTTTCGAAGGTAGAACTTaGACTCCACTCGCTCCAGAAGCCTTTGAAGTAATCGTTATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PSSLILGFWSFEGRT*TPLAPEAFEVIVMG Trigger: CCCCATAACGATTACTTCAAAGGCTTCTGGAGCGAGTGGAGTCCAAGTTCTACCTTCGAAACTCCAGAACCCAAGAATCAAGGAGGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS TCA 90 bp | AAACTCAGAATGGTGACACTTGGCAAGACAGGATCCCATCCTCCTTaGTTCTTGGGTTCTGGAGTTTCGAAGGTAGAACTTGGACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: KLRMVTLGKTGSHPP*FLGSGVSKVELGLH Trigger: GTGGAGTCCAAGTTCTACCTTCGAAACTCCAGAACCCAAGAATCAAGGAGGATGGGATCCTGTCTTGCCAAGTGTCACCATTCTGAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR CAA 90 bp | CACATACACACACACACACACAAAATGAACAGTGCTGTATCAATTCCAGAAAATAGTTGCTTTCACCCCTaGCTGGGCGGTAGGCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: HIHTHTHKMNSAVSIPENSCFHP*LGGRPH Trigger: ATGTGGCCTACCGCCCAGCAAGGGGTGAAAGCAACT...ATTTTCTGGAATTGATACAGCACTGTTCATTTTGTGTGTGTGTGTGTGTATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR CAA 90 bp | CACAAAATGAACAGTGCTGTATCAATTCCAGAAAATAGCGCATGCTTGTATTTGAGTTGCTTTCACCCCTaGCTGGGCGGTAGGCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: HKMNSAVSIPENSACLYLSCFHP*LGGRPH Trigger: ATGTGGCCTACCGCCCAGCAAGGGGTGAAAGCAACT...CAAATACAAGCATGCGCTATTTTCTGGAATTGATACAGCACTGTTCATTTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
||
| CDS-3UTR CAA 90 bp | CACAAAATGAACAGTGCTGTATCAATTCCAGAAAATAGCGCATGCTTGTATTTGCTGGAAAGGCAATGGTaGAGGGACAGGGACAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HKMNSAVSIPENSACLYLLERQW*RDRDRD Trigger: GTCCCTGTCCCTGTCCCTCAACCATTGCCTTTCCAG...CAAATACAAGCATGCGCTATTTTCTGGAATTGATACAGCACTGTTCATTTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003981.6 |
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| CDS-3UTR CAA 90 bp | GAAAGGCAATGGTTGAGGGACAGGGACAGGGACATTTGTGTTTCCAGAGTTTGGGTGGGATTGTTGTTCTaGTGTGGAATAAAGATACAT | + |
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Preference number: 5 (lower is better) Translates to: ERQWLRDRDRDICVSRVWVGLLF*CGIKIH Trigger: ATGTATCTTTATTCCACACAAGAACAACAATCCCAC...CCAAACTCTGGAAACACAAATGTCCCTGTCCCTGTCCCTCAACCATTGCCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
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| CDS-3UTR CAA 90 bp | GAAAGGCAATGGTTGAGGGACAGGGACAGGGACATTTGTGTTTCCAGAGTTTGGGGAATGGATCGGACTTaGATTTCATACATTGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: ERQWLRDRDRDICVSRVWGMDRT*ISYIAF Trigger: AAAAGCAATGTATGAAATCAAAGTCCGATCCATTCC...CCAAACTCTGGAAACACAAATGTCCCTGTCCCTGTCCCTCAACCATTGCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
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| CDS-3UTR CAA 90 bp | ACAGAGAAGCCAATGGATAATAGCAGCAGGAAAATCATGGTCTTGATAACTGACAGGATCCCATCCTCCTaGATTCTTGGGTTCTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: TEKPMDNSSRKIMVLITDRIPSS*ILGFWS Trigger: ACTCCAGAACCCAAGAATCAAGGAGGATGGGATCCT...GTCAGTTATCAAGACCATGATTTTCCTGCTGCTATTATCCATTGGCTTCTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS TCA 90 bp | CGCCTTTCACCTCATGAATCTGGCAGTCCAGGAAACTTTCGGGATTaGAACTCACATTCAGACTCGTTTTTGGCTTCTTACATAGTTGTT | + |
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Preference number: 5 (lower is better) Translates to: RLSPHESGSPGNFRD*NSHSDSFLASYIVV Trigger: AACAACTATGTAAGAAGCCAAAAACGAGTCTGAATGTGAGTTTCAATCCCGAAAGTTTCCTGGACTGCCAGATTCATGAGGTGAAAGGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003981.6 |
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| CDS-3UTR CAA 90 bp | GTTCTTAATGGTGTCTCCACACATAGGAGGACTCACATAGGAGGACTCCATTCAAGCTTCACACATATATaGCTGCTACCAATCAGTAAG | + |
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Preference number: 5 (lower is better) Translates to: VLNGVSTHRRTHIGGLHSSFTHI*LLPISK Trigger: CTTACTGATTGGTAGCAGCAATATATGTGTGAAGCT...TGAATGGAGTCCTCCTATGTGAGTCCTCCTATGTGTGGAGACACCATTAAGAAC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS-3UTR CAA 90 bp | AGATTTCTAGCCAGGCATCTTAAGGGTGACTCTCTTCTAACTGTTTCTGGTGGGTTCTCTGTGGGATTGTaGTTCTTGTGTGGAATAAAG | + |
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Preference number: 5 (lower is better) Translates to: RFLARHLKGDSLLTVSGGFSVGL*FLCGIK Trigger: CTTTATTCCACACAAGAACAACAATCCCACAGAGAA...CCCACCAGAAACAGTTAGAAGAGAGTCACCCTTAAGATGCCTGGCTAGAAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228782.2 |
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| CDS-3UTR CAA 90 bp | TTTCCAAAACGACTCAGTTTGGATAATGGACTACATAACCATCCACTTAGTGGTAGGAGTGGAGGGGCATaGCAGGTACTCAGATTTCTA | + |
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Preference number: 5 (lower is better) Translates to: FPKRLSLDNGLHNHPLSGRSGGA*QVLRFL Trigger: TAGAAATCTGAGTACCTGCAATGCCCCTCCACTCCT...ACCACTAAGTGGATGGTTATGTAGTCCATTATCCAAACTGAGTCGTTTTGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003981.6 |
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| CDS-3UTR CAA 90 bp | CAAAGGCTTACAGAGAATGAATTGAATAACTTGAGATTCCCTGGATCCAAACATAGGATCCCATCCTCCTaGATTCTTGGGTTCTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: QRLTENELNNLRFPGSKHRIPSS*ILGFWS Trigger: ACTCCAGAACCCAAGAATCAAGGAGGATGGGATCCT...ATGTTTGGATCCAGGGAATCTCAAGTTATTCAATTCATTCTCTGTAAGCCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS-3UTR CAA 90 bp | TTTCCAAAACGACTCAGTTTGGATAATGGACTACATAACCATCCACTTAGTGGTGTTTGGCAGCAAGTCTaGATACACAGGAGGCCTATT | + |
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Preference number: 5 (lower is better) Translates to: FPKRLSLDNGLHNHPLSGVWQQV*IHRRPI Trigger: AATAGGCCTCCTGTGTATCAAGACTTGCTGCCAAAC...ACCACTAAGTGGATGGTTATGTAGTCCATTATCCAAACTGAGTCGTTTTGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003981.6 |
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| CDS-3UTR CAA 90 bp | ACACATAGGAGGACTCACATAGGAGGACTCCATTCACTGTTAAATGTTGAACTCTTGTGTTTCCAGAGTTaGGCAGCAAGTCTTGATACA | + |
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Preference number: 5 (lower is better) Translates to: THRRTHIGGLHSLLNVELLCFQS*AASLDT Trigger: TGTATCAAGACTTGCTGCCAAACTCTGGAAACACAA...GAGTTCAACATTTAACAGTGAATGGAGTCCTCCTATGTGAGTCCTCCTATGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003981.6 |
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| CDS-3UTR CAA 90 bp | CACAAAATGAACAGTGCTGTATCAATTCCAGAAAATAGCGCATGCTTGTATTTGTGTGCAGGAAGATCATaGGGCAGAAAACTTTCCACC | + |
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Preference number: 5 (lower is better) Translates to: HKMNSAVSIPENSACLYLCAGRS*GRKLST Trigger: GGTGGAAAGTTTTCTGCCCAATGATCTTCCTGCACA...CAAATACAAGCATGCGCTATTTTCTGGAATTGATACAGCACTGTTCATTTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003981.6 |
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| CDS-3UTR CAA 90 bp | ACACACACACACACACATACACACACACACACACAAAATGAACAGTGCTGTATCTCCAGATTAGCTGTGTaGATGTCTGAGTCATTAAAA | + |
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Preference number: 5 (lower is better) Translates to: THTHTHTHTHTQNEQCCISRLAV*MSESLK Trigger: TTTTAATGACTCAGACATCAACACAGCTAATCTGGA...GATACAGCACTGTTCATTTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS-3UTR CAA 90 bp | GAAAATAGCGCATGCTTGTATTTGAAGGCAAAAGTCTGGATGAAGAGAGAGACAGTTTTCTCTGTGGGATaGTTGTTCTTGTGTGGAATA | + |
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Preference number: 5 (lower is better) Translates to: ENSACLYLKAKVWMKRETVFSVG*LFLCGI Trigger: TATTCCACACAAGAACAACAATCCCACAGAGAAAAC...TGTCTCTCTCTTCATCCAGACTTTTGCCTTCAAATACAAGCATGCGCTATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS-3UTR CAA 90 bp | TTTCCAAAACGACTCAGTTTGGATAATGGACTACATAACCATCCACTTAGTGGTAGGAAACTTTCGGGATaGAAACTCACATTCAGACTC | + |
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Preference number: 5 (lower is better) Translates to: FPKRLSLDNGLHNHPLSGRKLSG*KLTFRL Trigger: GAGTCTGAATGTGAGTTTCAATCCCGAAAGTTTCCT...ACCACTAAGTGGATGGTTATGTAGTCCATTATCCAAACTGAGTCGTTTTGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003981.6 |
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| CDS-3UTR CAA 90 bp | ACAGAGAAGCCAATGGATAATAGCAGCAGGAAAATCATGGTCTTGATAACTGACTCCAGATTAGCTGTGTaGATGTCTGAGTCATTAAAA | + |
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Preference number: 5 (lower is better) Translates to: TEKPMDNSSRKIMVLITDSRLAV*MSESLK Trigger: TTTTAATGACTCAGACATCAACACAGCTAATCTGGA...GTCAGTTATCAAGACCATGATTTTCCTGCTGCTATTATCCATTGGCTTCTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS-3UTR CAA 90 bp | TTCATGTTCATCCCTATAGCCACTTTAAGTAAAATGACCATCCATCCACATCTCAAGAGCCCCACATATTaGAAATTCCAGATTAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: FMFIPIATLSKMTIHPHLKSPTY*KFQISC Trigger: ACAGCTAATCTGGAATTTCAAATATGTGGGGCTCTT...GAGATGTGGATGGATGGTCATTTTACTTAAAGTGGCTATAGGGATGAACATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS-3UTR CAA 90 bp | ACTGTAGTGAATGGTGGATGTATTAAAGAACACCAGAGAAAAACTGCTGAGCTCGTGGGATTGTTGTTCTaGTGTGGAATAAAGATACAT | + |
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Preference number: 5 (lower is better) Translates to: TVVNGGCIKEHQRKTAELVGLLF*CGIKIH Trigger: ATGTATCTTTATTCCACACAAGAACAACAATCCCAC...GAGCTCAGCAGTTTTTCTCTGGTGTTCTTTAATACATCCACCATTCACTACAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS-3UTR CAA 90 bp | CAAAGGCTTACAGAGAATGAATTGAATAACTTGAGATTCCCTGGATCCAAACATTTCTCTGTGGGATTGTaGTTCTTGTGTGGAATAAAG | + |
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Preference number: 5 (lower is better) Translates to: QRLTENELNNLRFPGSKHFSVGL*FLCGIK Trigger: CTTTATTCCACACAAGAACAACAATCCCACAGAGAA...ATGTTTGGATCCAGGGAATCTCAAGTTATTCAATTCATTCTCTGTAAGCCTTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS-3UTR CAA 90 bp | CACAAAATGAACAGTGCTGTATCAATTCCAGAAAATAGCGCATGCTTGTATTTGGTTTTCTCTGTGGGATaGTTGTTCTTGTGTGGAATA | + |
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Preference number: 5 (lower is better) Translates to: HKMNSAVSIPENSACLYLVFSVG*LFLCGI Trigger: TATTCCACACAAGAACAACAATCCCACAGAGAAAAC...CAAATACAAGCATGCGCTATTTTCTGGAATTGATACAGCACTGTTCATTTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS-3UTR CAA 90 bp | CACACCCATAAATGTACTTTGTCCTTCATGTTCATCCCTATAGCCACTTTAAGTTTTCATACATTGCTTTaGGTCGTAGTTTTCTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: HTHKCTLSFMFIPIATLSFHTLL*VVVFSV Trigger: CACAGAGAAAACTACGACCAAAAGCAATGTATGAAA...ACTTAAAGTGGCTATAGGGATGAACATGAAGGACAAAGTACATTTATGGGTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS-3UTR CAA 90 bp | CACACCCATAAATGTACTTTGTCCTTCATGTTCATCCCTATAGCCACTTTAAGTGGAATGGATCGGACTTaGATTTCATACATTGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: HTHKCTLSFMFIPIATLSGMDRT*ISYIAF Trigger: AAAAGCAATGTATGAAATCAAAGTCCGATCCATTCC...ACTTAAAGTGGCTATAGGGATGAACATGAAGGACAAAGTACATTTATGGGTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS-3UTR CAA 90 bp | ATTCATTTTAAAAAGTGTACAGTCAACCCAGAGATCTTCACTGTAGTGAATGGTAAGAGCCCCACATATTaGAAATTCCAGATTAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: IHFKKCTVNPEIFTVVNGKSPTY*KFQISC Trigger: ACAGCTAATCTGGAATTTCAAATATGTGGGGCTCTT...ACCATTCACTACAGTGAAGATCTCTGGGTTGACTGTACACTTTTTAAAATGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS-3UTR CAA 90 bp | CAAAGGCTTACAGAGAATGAATTGAATAACTTGAGATTCCCTGGATCCAAACATTTTCATACATTGCTTTaGGTCGTAGTTTTCTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: QRLTENELNNLRFPGSKHFHTLL*VVVFSV Trigger: CACAGAGAAAACTACGACCAAAAGCAATGTATGAAA...ATGTTTGGATCCAGGGAATCTCAAGTTATTCAATTCATTCTCTGTAAGCCTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS TCA 72 bp | CCATCCACTTCCAACTGGCTGTGGCACCAGAAGGAGTaGTCGTCCGCGTCTGCATCTTCTAGGTCTCCATCC | + |
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Preference number: 6 (lower is better) Translates to: PSTSNWLWHQKE*SSASASSRSPS Trigger: GGATGGAGACCTAGAAGATGCAGACGCGGACGATCACTCCTTCTGGTGCCACAGCCAGTTGGAAGTGGATGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS CCA 72 bp | CAAGACAGGATCCCATCCTCCTTGATTCTTGGGTTCTaGAGTTTCGAAGGTAGAACTTGGACTCCACTCGCT | + |
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Preference number: 6 (lower is better) Translates to: QDRIPSSLILGF*SFEGRTWTPLA Trigger: AGCGAGTGGAGTCCAAGTTCTACCTTCGAAACTCCAGAACCCAAGAATCAAGGAGGATGGGATCCTGTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS TCA 72 bp | ATGGTGACACTTGGCAAGACAGGATCCCATCCTCCTTaGTTCTTGGGTTCTGGAGTTTCGAAGGTAGAACTT | + |
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Preference number: 6 (lower is better) Translates to: MVTLGKTGSHPP*FLGSGVSKVEL Trigger: AAGTTCTACCTTCGAAACTCCAGAACCCAAGAATCAAGGAGGATGGGATCCTGTCTTGCCAAGTGTCACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS CAA 72 bp | GGAATAAAGATACATGCGTCCAGTTGCTTTCACCCCTaGCTGGGCGGTAGGCCACATCATGCTTTACTTTTT | + |
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Preference number: 6 (lower is better) Translates to: GIKIHASSCFHP*LGGRPHHALLF Trigger: AAAAAGTAAAGCATGATGTGGCCTACCGCCCAGCAAGGGGTGAAAGCAACTGGACGCATGTATCTTTATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS CCA 72 bp | TTGATTCTTGGGTTCTGGAGTTTCGAAGGTAGAACTTaGACTCCACTCGCTCCAGAAGCCTTTGAAGTAATC | + |
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Preference number: 6 (lower is better) Translates to: LILGFWSFEGRT*TPLAPEAFEVI Trigger: GATTACTTCAAAGGCTTCTGGAGCGAGTGGAGTCCAAGTTCTACCTTCGAAACTCCAGAACCCAAGAATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS CCA 72 bp | CAAAAACACAGAGAACAAACTCAGAATGGTGACACTTaGCAAGACAGGATCCCATCCTCCTTGATTCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: QKHREQTQNGDT*QDRIPSSLILG Trigger: CCCAAGAATCAAGGAGGATGGGATCCTGTCTTGCCAAGTGTCACCATTCTGAGTTTGTTCTCTGTGTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS TCA 72 bp | GTTAGGCATTTCACTCGTAAAAGAGCCCCACATATTTaGAATTCCAGATTAGCTGTGTTGATGTCTGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: VRHFTRKRAPHI*NSRLAVLMSES Trigger: TGACTCAGACATCAACACAGCTAATCTGGAATTTCAAATATGTGGGGCTCTTTTACGAGTGAAATGCCTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS CAA 72 bp | ACATTGCTTTTGGTCGTAGTTTTCTCTGTGGGATTGTaGTTCTTGTGTGGAATAAAGATACATGCGTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: TLLLVVVFSVGL*FLCGIKIHASS Trigger: ACTGGACGCATGTATCTTTATTCCACACAAGAACAACAATCCCACAGAGAAAACTACGACCAAAAGCAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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| CDS CAA 72 bp | CATACATTGCTTTTGGTCGTAGTTTTCTCTGTGGGATaGTTGTTCTTGTGTGGAATAAAGATACATGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: HTLLLVVVFSVG*LFLCGIKIHAS Trigger: GGACGCATGTATCTTTATTCCACACAAGAACAACAATCCCACAGAGAAAACTACGACCAAAAGCAATGTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003981.6 ENSMUST00000228782.2 |
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