Pregenerated sensors for IL5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036117Ensembl transcript IDs: ENSMUST00000048605.3
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGATCCTCCTGCGTCCATCTGGACCAAGAGTTCAGGGTCACCCTTaGCTACACACTGAGTTCAAAGTCAGCCTGGAATACTTGAGACCC | + |
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Preference number: 1 (lower is better) Translates to: VILLRPSGPRVQGHP*LHTEFKVSLEYLRP Trigger: GGGTCTCAAGTATTCCAGGCTGACTTTGAACTCAGTGTGTAGCCAAGGGTGACCCTGAACTCTTGGTCCAGATGGACGCAGGAGGATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR CCA 90 bp | CTTCAGGAAGAGGAGGCAGGAGGATCAGAAATTCAAGGTTATCCTTaGCTACATTACCAGTTTGAGGCCAGCCTGCGCTACAGGAATTTC | + |
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Preference number: 1 (lower is better) Translates to: LQEEEAGGSEIQGYP*LHYQFEASLRYRNF Trigger: GAAATTCCTGTAGCGCAGGCTGGCCTCAAACTGGTAATGTAGCCAAGGATAACCTTGAATTTCTGATCCTCCTGCCTCCTCTTCCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR CCA 90 bp | TCCCAACCATTTTATGCTTTCTGTTGGCATGGGGTAGTAAGGTTGTaGTATTTACTTTGCTTCTTAAGTTCAGTTACACGGAGAAGTAAG | + |
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Preference number: 1 (lower is better) Translates to: SQPFYAFCWHGVVRL*YLLCFLSSVTRRSK Trigger: CTTACTTCTCCGTGTAACTGAACTTAAGAAGCAAAGTAAATACCACAACCTTACTACCCCATGCCAACAGAAAGCATAAAATGGTTGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR-3UTR GCA 90 bp | AGGCCCAGCATGTGGCTGGCTCTCATTCACACTGCAAGGAGATGTCCCTTTTCTAGTTTGAGGCCAGCCTaGGCTACAGGAATTTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: RPSMWLALIHTARRCPFSSLRPA*ATGISF Trigger: AAAAGAAATTCCTGTAGCGCAGGCTGGCCTCAAACT...AGAAAAGGGACATCTCCTTGCAGTGTGAATGAGAGCCAGCCACATGCTGGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCCAGCATGTGGCTGGCTCTCATTCACACTGCAAGGAGATGTCCCTTTTCACAGAGGCACAGTCATaGCACAGTCTGATTCATACA | + |
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Preference number: 2 (lower is better) Translates to: KAQHVAGSHSHCKEMSLFTEAQS*HSLIHT Trigger: TGTATGAATCAGACTGTGCCATGACTGTGCCTCTGT...GAAAAGGGACATCTCCTTGCAGTGTGAATGAGAGCCAGCCACATGCTGGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGTCATTAAGTATCATCTATCTAAAGGGGCTAGGAGAAAGGATGCTAAGGCCCTTGGCTACACACTaGGTTCAAAGTCAGCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: RESLSIIYLKGLGERMLRPLATH*VQSQPG Trigger: TCCAGGCTGACTTTGAACTCAGTGTGTAGCCAAGGG...CCTTAGCATCCTTTCTCCTAGCCCCTTTAGATAGATGATACTTAATGACTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR-3UTR GCA 90 bp | GAAATTCAAGGTTATCCTTGGCTACATTACCAGTTTGAGGCCAGCCTGCGCTACGGTATCCCTTGCATTTaGACAGTTTTGTGGGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: EIQGYPWLHYQFEASLRYGIPCI*TVLWGF Trigger: AAAACCCCACAAAACTGTGCAAATGCAAGGGATACC...GTAGCGCAGGCTGGCCTCAAACTGGTAATGTAGCCAAGGATAACCTTGAATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTTCCAAAATCCAGCTGCTCCAGGCACAGAGGCACAGTCATGGCACAGTCATTCAAGGTTATCCTTaGCTACATTACCAGTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: FFSKIQLLQAQRHSHGTVIQGYP*LHYQFE Trigger: CTCAAACTGGTAATGTAGCCAAGGATAACCTTGAAT...GACTGTGCCATGACTGTGCCTCTGTGCCTGGAGCAGCTGGATTTTGGAAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR-3UTR CCA 90 bp | GGTAGTAAGGTTGTGGTATTTACTTTGCTTCTTAAGTTCAGTTACACGGAGAAGCCTCCTGCGTCCATCTaGACCAAGAGTTCAGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: GSKVVVFTLLLKFSYTEKPPASI*TKSSGS Trigger: TGACCCTGAACTCTTGGTCCAGATGGACGCAGGAGG...CTTCTCCGTGTAACTGAACTTAAGAAGCAAAGTAAATACCACAACCTTACTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGTCATTAAGTATCATCTATCTAAAGGGGCTAGGAGAAAGGATGCTAAGGACATGCACAAAGCCTTaGGTTCCATCTCCAGCACTT | + |
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Preference number: 2 (lower is better) Translates to: RESLSIIYLKGLGERMLRTCTKP*VPSPAL Trigger: AAGTGCTGGAGATGGAACCCAAGGCTTTGTGCATGT...CCTTAGCATCCTTTCTCCTAGCCCCTTTAGATAGATGATACTTAATGACTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR-3UTR TCA 90 bp | GGTAGTAAGGTTGTGGTATTTACTTTGCTTCTTAAGTTCAGTTACACGGAGAAGGAATACTTGAGACCCTaGTGCAACGAAGAGGATGAG | + |
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Preference number: 2 (lower is better) Translates to: GSKVVVFTLLLKFSYTEKEYLRP*CNEEDE Trigger: CTCATCCTCTTCGTTGCATCAGGGTCTCAAGTATTC...CTTCTCCGTGTAACTGAACTTAAGAAGCAAAGTAAATACCACAACCTTACTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGTCATTAAGTATCATCTATCTAAAGGGGCTAGGAGAAAGGATGCTAAGGGCATATGGTATCCCTTaGATTTGCACAGTTTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: RESLSIIYLKGLGERMLRAYGIP*ICTVLW Trigger: CCACAAAACTGTGCAAATGCAAGGGATACCATATGC...CCTTAGCATCCTTTCTCCTAGCCCCTTTAGATAGATGATACTTAATGACTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR TCA 72 bp | GGCTACACACTGAGTTCAAAGTCAGCCTGGAATACTTaGGACCCTGATGCAACGAAGAGGATGAGGGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: GYTLSSKSAWNT*DPDATKRMRGR Trigger: CCTCCCCCTCATCCTCTTCGTTGCATCAGGGTCTCAAGTATTCCAGGCTGACTTTGAACTCAGTGTGTAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR CCA 72 bp | CTGCGTCCATCTGGACCAAGAGTTCAGGGTCACCCTTaGCTACACACTGAGTTCAAAGTCAGCCTGGAATAC | + |
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Preference number: 3 (lower is better) Translates to: LRPSGPRVQGHP*LHTEFKVSLEY Trigger: GTATTCCAGGCTGACTTTGAACTCAGTGTGTAGCCAAGGGTGACCCTGAACTCTTGGTCCAGATGGACGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR TCA 72 bp | TGGACCAAGAGTTCAGGGTCACCCTTGGCTACACACTaGGTTCAAAGTCAGCCTGGAATACTTGAGACCCTG | + |
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Preference number: 3 (lower is better) Translates to: WTKSSGSPLATH*VQSQPGILETL Trigger: CAGGGTCTCAAGTATTCCAGGCTGACTTTGAACTCAGTGTGTAGCCAAGGGTGACCCTGAACTCTTGGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR-3UTR CAA 90 bp | AGTAAGGCCCAGCATGTGGCTGGCTCTCATTCACACTGCAAGGAGATGTCCCTTCTAGTGGGTATTAAATaGAAGTTAGATAGGAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: SKAQHVAGSHSHCKEMSLLVGIK*KLDRSR Trigger: CCTGCTCCTATCTAACTTCAATTTAATACCCACTAG...AAGGGACATCTCCTTGCAGTGTGAATGAGAGCCAGCCACATGCTGGGCCTTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR CCA 72 bp | GGGAGTATAACTCAGTTGGTAACATGCACAAAGCCTTaGGTTCCATCTCCAGCACTTCATGAACTAGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: GSITQLVTCTKP*VPSPALHELVA Trigger: TGCCACTAGTTCATGAAGTGCTGGAGATGGAACCCAAGGCTTTGTGCATGTTACCAACTGAGTTATACTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR TCA 72 bp | GAGTTTGGGGAGAGTAGCAGGGAGTTGAGGAGAGATTaGCTAGTGGGTATTAAATTGAAGTTAGATAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: EFGESSRELRRD*LVGIKLKLDRS Trigger: GCTCCTATCTAACTTCAATTTAATACCCACTAGTCAATCTCTCCTCAACTCCCTGCTACTCTCCCCAAACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR-3UTR CAA 90 bp | TTGGCATGGGGTAGTAAGGTTGTGGTATTTACTTTGCTTCTTAAGTTCAGTTACAACATGCACAAAGCCTaGGGTTCCATCTCCAGCACT | + |
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Preference number: 3 (lower is better) Translates to: LAWGSKVVVFTLLLKFSYNMHKA*GSISST Trigger: AGTGCTGGAGATGGAACCCAAGGCTTTGTGCATGTT...GTAACTGAACTTAAGAAGCAAAGTAAATACCACAACCTTACTACCCCATGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR TCA 72 bp | AGAAATTCAAGGTTATCCTTGGCTACATTACCAGTTTaGGGCCAGCCTGCGCTACAGGAATTTCTTTTATGC | + |
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Preference number: 3 (lower is better) Translates to: RNSRLSLATLPV*GQPALQEFLLC Trigger: GCATAAAAGAAATTCCTGTAGCGCAGGCTGGCCTCAAACTGGTAATGTAGCCAAGGATAACCTTGAATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR-3UTR CAA 90 bp | TTGGCATGGGGTAGTAAGGTTGTGGTATTTACTTTGCTTCTTAAGTTCAGTTACGGGAGTATAACTCAGTaGGTAACATGCACAAAGCCT | + |
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Preference number: 3 (lower is better) Translates to: LAWGSKVVVFTLLLKFSYGSITQ*VTCTKP Trigger: AGGCTTTGTGCATGTTACCAACTGAGTTATACTCCC...GTAACTGAACTTAAGAAGCAAAGTAAATACCACAACCTTACTACCCCATGCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR CCA 72 bp | AATAACATCCCAACCATTTTATGCTTTCTGTTGGCATaGGGTAGTAAGGTTGTGGTATTTACTTTGCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: NNIPTILCFLLA*GSKVVVFTLLL Trigger: AAGAAGCAAAGTAAATACCACAACCTTACTACCCCATGCCAACAGAAAGCATAAAATGGTTGGGATGTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| CDS-3UTR TCA 90 bp | AGTAAGGCCCAGCATGTGGCTGGCTCTCATTCACACTGCAAGGAGATGTCCCTTTGGCCCAGACACAGCTaGGAGTCAGAACACTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: SKAQHVAGSHSHCKEMSLWPRHS*ESEHSS Trigger: ACTTGAGTGTTCTGACTCTCAGCTGTGTCTGGGCCA...AAGGGACATCTCCTTGCAGTGTGAATGAGAGCCAGCCACATGCTGGGCCTTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| CDS-3UTR GCA 90 bp | GACCAAGAGTTCAGGGTCACCCTTGGCTACACACTGAGTTCAAAGTCAGCCTGGGCCTCATCGTCTCATTaGTTGTCAACAGAGCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: DQEFRVTLGYTLSSKSAWASSSH*LSTELG Trigger: ACCGAGCTCTGTTGACAAGCAATGAGACGATGAGGC...CCAGGCTGACTTTGAACTCAGTGTGTAGCCAAGGGTGACCCTGAACTCTTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| CDS-3UTR TCA 90 bp | TTGGCATGGGGTAGTAAGGTTGTGGTATTTACTTTGCTTCTTAAGTTCAGTTACGTCAACAGAGCTCGGTaGGCGGACAGCTGTGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: LAWGSKVVVFTLLLKFSYVNRAR*ADSCVK Trigger: CTTGACACAGCTGTCCGCTCACCGAGCTCTGTTGAC...GTAACTGAACTTAAGAAGCAAAGTAAATACCACAACCTTACTACCCCATGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR CAA 72 bp | CAGAAATTCAAGGTTATCCTTGGCTACATTACCAGTTaGAGGCCAGCCTGCGCTACAGGAATTTCTTTTATG | + |
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Preference number: 4 (lower is better) Translates to: QKFKVILGYITS*RPACATGISFM Trigger: CATAAAAGAAATTCCTGTAGCGCAGGCTGGCCTCAAACTGGTAATGTAGCCAAGGATAACCTTGAATTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| CDS-3UTR CCA 90 bp | AGTCAACCTTCTCTCTCCCCAAGAAATAGAAGTGGGCTTACTAGAGTTTGGGGACCACACTTCTCTTTTTaGCGGTCAATGTATTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SQPSLSPRNRSGLTRVWGPHFSF*RSMYFF Trigger: AAAGAAATACATTGACCGCCAAAAAGAGAAGTGTGG...TCCCCAAACTCTAGTAAGCCCACTTCTATTTCTTGGGGAGAGAGAAGGTTGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| 3UTR CAA 72 bp | CCATTTTATGCTTTCTGTTGGCATGGGGTAGTAAGGTaGTGGTATTTACTTTGCTTCTTAAGTTCAGTTACA | + |
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Preference number: 4 (lower is better) Translates to: PFYAFCWHGVVR*WYLLCFLSSVT Trigger: TGTAACTGAACTTAAGAAGCAAAGTAAATACCACAACCTTACTACCCCATGCCAACAGAAAGCATAAAATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| CDS TCA 90 bp | GGGACAGGAAGCCTCATCGTCTCATTGCTTGTCAACAGAGCTCGGTaGGCGGACAGCTGTGTCAAGGTCTCTTTCACCACTGTGCTCATG | + |
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Preference number: 5 (lower is better) Translates to: GTGSLIVSLLVNRAR*ADSCVKVSFTTVLM Trigger: CATGAGCACAGTGGTGAAAGAGACCTTGACACAGCTGTCCGCTCACCGAGCTCTGTTGACAAGCAATGAGACGATGAGGCTTCCTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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| CDS-3UTR CAA 90 bp | TGGGTTCCATCTCCAGCACTTCATGAACTAGTGGCAATGGTGCATGTCTGTAACGCCACACTTCTCTTTTaGGCGGTCAATGTATTTCTT | + |
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Preference number: 5 (lower is better) Translates to: WVPSPALHELVAMVHVCNATLLF*AVNVFL Trigger: AAGAAATACATTGACCGCCAAAAAGAGAAGTGTGGC...GTTACAGACATGCACCATTGCCACTAGTTCATGAAGTGCTGGAGATGGAACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048605.3 |
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