Pregenerated sensors for IL4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000000869

Ensembl transcript IDs: ENSMUST00000000889.7, ENSMUST00000140684.8, ENSMUST00000150568.8

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 72 bp	CCTACAGACGAGCTCACTCTCTGTGGTGTTCTTCGTTaGTGTGAGGACGTTTGGCACATCCATCTCCGTGCA	+
Preference number: 6 (lower is better) Translates to: PTDELTLCGVLR*CEDVWHIHLRA Trigger: TGCACGGAGATGGATGTGCCAAACGTCCTCACAGCAACGAAGAACACCACAGAGAGTGAGCTCGTCTGTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000889.7
CDS GCA 72 bp	GATGAATCCAGGCATCGAAAAGCCCGAAAGAGTCTCTaGAGCTCCATGAGAACACTAGAGTTCTTCTTCAAG	+
Preference number: 6 (lower is better) Translates to: DESRHRKARKSL*SSMRTLEFFFK Trigger: CTTGAAGAAGAACTCTAGTGTTCTCATGGAGCTGCAGAGACTCTTTCGGGCTTTTCGATGCCTGGATTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000889.7
CDS CAA 90 bp	ATGATGCTCTTTAGGCTTTCCAGGAAGTCTTTCAGTGATGTGGACTaGGACTCATTCATGGTGCAGCTTATCGATGAATCCAGGCATCGA	+
Preference number: 6 (lower is better) Translates to: MMLFRLSRKSFSDVD*DSFMVQLIDESRHR Trigger: TCGATGCCTGGATTCATCGATAAGCTGCACCATGAATGAGTCCAAGTCCACATCACTGAAAGACTTCCTGGAAAGCCTAAAGAGCATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000889.7 ENSMUST00000140684.8 ENSMUST00000150568.8
CDS CCA 72 bp	TGCTCTTTAGGCTTTCCAGGAAGTCTTTCAGTGATGTaGACTTGGACTCATTCATGGTGCAGCTTATCGATG	+
Preference number: 6 (lower is better) Translates to: CSLGFPGSLSVM*TWTHSWCSLSM Trigger: CATCGATAAGCTGCACCATGAATGAGTCCAAGTCCACATCACTGAAAGACTTCCTGGAAAGCCTAAAGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000889.7 ENSMUST00000140684.8 ENSMUST00000150568.8
CDS CCA 72 bp	TTAGGCTTTCCAGGAAGTCTTTCAGTGATGTGGACTTaGACTCATTCATGGTGCAGCTTATCGATGAATCCA	+
Preference number: 6 (lower is better) Translates to: LGFPGSLSVMWT*THSWCSLSMNP Trigger: TGGATTCATCGATAAGCTGCACCATGAATGAGTCCAAGTCCACATCACTGAAAGACTTCCTGGAAAGCCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000889.7 ENSMUST00000140684.8 ENSMUST00000150568.8
CDS CAA 72 bp	TTTAGGCTTTCCAGGAAGTCTTTCAGTGATGTGGACTaGGACTCATTCATGGTGCAGCTTATCGATGAATCC	+
Preference number: 6 (lower is better) Translates to: FRLSRKSFSDVD*DSFMVQLIDES Trigger: GGATTCATCGATAAGCTGCACCATGAATGAGTCCAAGTCCACATCACTGAAAGACTTCCTGGAAAGCCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000889.7 ENSMUST00000140684.8 ENSMUST00000150568.8

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