Pregenerated sensors for IL3RA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068758Ensembl transcript IDs: ENSMUST00000090591.4, ENSMUST00000223589.2, ENSMUST00000224163.2, ENSMUST00000224877.2, ENSMUST00000225775.2
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCTGTCTCAGCTCCTGTCTGGGCCACCCTTGGGCAGGGGTCACTaGGTCCACGTGCCATGTGGTGGGCAGGACTTCCTCCCTTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: PLSQLLSGPPLGRGH*VHVPCGGQDFLPWF Trigger: AAACCAAGGGAGGAAGTCCTGCCCACCACATGGCACGTGGACCCAGTGACCCCTGCCCAAGGGTGGCCCAGACAGGAGCTGAGACAGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR GCA 90 bp | AGCTCCTGTCTGGGCCACCCTTGGGCAGGGGTCACTGGGTCCACGTaGCATGTGGTGGGCAGGACTTCCTCCCTTGGTTTTCCTTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: SSCLGHPWAGVTGST*HVVGRTSSLGFPSE Trigger: CTCTGAAGGAAAACCAAGGGAGGAAGTCCTGCCCACCACATGGCACGTGGACCCAGTGACCCCTGCCCAAGGGTGGCCCAGACAGGAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR CCA 90 bp | AGTCATGGTCATGGTGAGGACTTCTGGGTGGGGGCAGAGCTGGGGTaGGGCCAGATGAGCATGACTGATAGCAGCACAGGAAGTCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: SHGHGEDFWVGAELG*GQMSMTDSSTGSPR Trigger: CCTGGGACTTCCTGTGCTGCTATCAGTCATGCTCATCTGGCCCCACCCCAGCTCTGCCCCCACCCAGAAGTCCTCACCATGACCATGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR GCA 90 bp | TCCTCCCTTGGTTTTCCTTCAGAGCCCCACTTCCTGTCGAAGCCCTaGCTCTTCCTGTCAGTCATGGTCATGGTGAGGACTTCTGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: SSLGFPSEPHFLSKP*LFLSVMVMVRTSGW Trigger: CCACCCAGAAGTCCTCACCATGACCATGACTGACAGGAAGAGGCAGGGCTTCGACAGGAAGTGGGGCTCTGAAGGAAAACCAAGGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR TCA 90 bp | TGTCTGACATTACATTCAACCTTTGATCCCAGAACGACCCCCGACTaGCCCTGGCAATCCCTCTGTCTCAGCTCCTGTCTGGGCCACCCT | + |
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Preference number: 1 (lower is better) Translates to: CLTLHSTFDPRTTPD*PWQSLCLSSCLGHP Trigger: AGGGTGGCCCAGACAGGAGCTGAGACAGAGGGATTGCCAGGGTCAGTCGGGGGTCGTTCTGGGATCAAAGGTTGAATGTAATGTCAGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR CAA 90 bp | GGGTCACTGGGTCCACGTGCCATGTGGTGGGCAGGACTTCCTCCCTaGGTTTTCCTTCAGAGCCCCACTTCCTGTCGAAGCCCTGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: GSLGPRAMWWAGLPP*VFLQSPTSCRSPAS Trigger: AGAGGCAGGGCTTCGACAGGAAGTGGGGCTCTGAAGGAAAACCAAGGGAGGAAGTCCTGCCCACCACATGGCACGTGGACCCAGTGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR-3UTR CCA 90 bp | GGACTTCCTCCCTTGGTTTTCCTTCAGAGCCCCACTTCCTGTCGAAGCCCTGCCGGGGCAGAGCTGGGGTaGGGCCAGATGAGCATGACT | + |
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Preference number: 2 (lower is better) Translates to: GLPPLVFLQSPTSCRSPAGAELG*GQMSMT Trigger: AGTCATGCTCATCTGGCCCCACCCCAGCTCTGCCCC...GGCAGGGCTTCGACAGGAAGTGGGGCTCTGAAGGAAAACCAAGGGAGGAAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR-3UTR GCA 90 bp | CACTTCCTGTCGAAGCCCTGCCTCTTCCTGTCAGTCATGGTCATGGTGAGGACTGCCCACCGCTCCCTATaGCCCAGCCCCCACACAGTT | + |
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Preference number: 2 (lower is better) Translates to: HFLSKPCLFLSVMVMVRTAHRSL*PSPHTV Trigger: AACTGTGTGGGGGCTGGGGCATAGGGAGCGGTGGGC...AGTCCTCACCATGACCATGACTGACAGGAAGAGGCAGGGCTTCGACAGGAAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACTTCCTCCCTTGGTTTTCCTTCAGAGCCCCACTTCCTGTCGAAGCCCTGCCATGGTGAGGACTTCTaGGTGGGGGCAGAGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RTSSLGFPSEPHFLSKPCHGEDF*VGAELG Trigger: CCCCAGCTCTGCCCCCACCCAGAAGTCCTCACCATG...GCAGGGCTTCGACAGGAAGTGGGGCTCTGAAGGAAAACCAAGGGAGGAAGTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR CCA 72 bp | CAGCTCCTGTCTGGGCCACCCTTGGGCAGGGGTCACTaGGTCCACGTGCCATGTGGTGGGCAGGACTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: QLLSGPPLGRGH*VHVPCGGQDFL Trigger: GAGGAAGTCCTGCCCACCACATGGCACGTGGACCCAGTGACCCCTGCCCAAGGGTGGCCCAGACAGGAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR GCA 72 bp | CTGGGCCACCCTTGGGCAGGGGTCACTGGGTCCACGTaGCATGTGGTGGGCAGGACTTCCTCCCTTGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: LGHPWAGVTGST*HVVGRTSSLGF Trigger: AAAACCAAGGGAGGAAGTCCTGCCCACCACATGGCACGTGGACCCAGTGACCCCTGCCCAAGGGTGGCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR CCA 72 bp | CAATCCCTCTGTCTCAGCTCCTGTCTGGGCCACCCTTaGGCAGGGGTCACTGGGTCCACGTGCCATGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: QSLCLSSCLGHP*AGVTGSTCHVV Trigger: CACCACATGGCACGTGGACCCAGTGACCCCTGCCCAAGGGTGGCCCAGACAGGAGCTGAGACAGAGGGATTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR CCA 72 bp | ACTGACCCTGGCAATCCCTCTGTCTCAGCTCCTGTCTaGGCCACCCTTGGGCAGGGGTCACTGGGTCCACGT | + |
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Preference number: 3 (lower is better) Translates to: TDPGNPSVSAPV*ATLGQGSLGPR Trigger: ACGTGGACCCAGTGACCCCTGCCCAAGGGTGGCCCAGACAGGAGCTGAGACAGAGGGATTGCCAGGGTCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR CCA 72 bp | CTTGGGCAGGGGTCACTGGGTCCACGTGCCATGTGGTaGGCAGGACTTCCTCCCTTGGTTTTCCTTCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: LGQGSLGPRAMW*AGLPPLVFLQS Trigger: GCTCTGAAGGAAAACCAAGGGAGGAAGTCCTGCCCACCACATGGCACGTGGACCCAGTGACCCCTGCCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR CCA 72 bp | ACCCTTGGGCAGGGGTCACTGGGTCCACGTGCCATGTaGTGGGCAGGACTTCCTCCCTTGGTTTTCCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: TLGQGSLGPRAM*WAGLPPLVFLQ Trigger: CTGAAGGAAAACCAAGGGAGGAAGTCCTGCCCACCACATGGCACGTGGACCCAGTGACCCCTGCCCAAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR TCA 72 bp | GGATGTGACATCATTGACCTACCGTACACTTGCAGTTaGACTCTGACCTCCAGGCCCCGTCCCCTTTCCACC | + |
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Preference number: 3 (lower is better) Translates to: GCDIIDLPYTCS*TLTSRPRPLST Trigger: GGTGGAAAGGGGACGGGGCCTGGAGGTCAGAGTTCAACTGCAAGTGTACGGTAGGTCAATGATGTCACATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR TCA 72 bp | TTACATTCAACCTTTGATCCCAGAACGACCCCCGACTaGCCCTGGCAATCCCTCTGTCTCAGCTCCTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: LHSTFDPRTTPD*PWQSLCLSSCL Trigger: CAGACAGGAGCTGAGACAGAGGGATTGCCAGGGTCAGTCGGGGGTCGTTCTGGGATCAAAGGTTGAATGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR TCA 72 bp | GGGCAAATAAAGATGTCTGACATTACATTCAACCTTTaGTCCCAGAACGACCCCCGACTGACCCTGGCAATC | + |
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Preference number: 3 (lower is better) Translates to: GQIKMSDITFNL*SQNDPRLTLAI Trigger: GATTGCCAGGGTCAGTCGGGGGTCGTTCTGGGATCAAAGGTTGAATGTAATGTCAGACATCTTTATTTGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR TCA 72 bp | CCCCAAGATGACCGCTGTGGGGCAAATAAAGATGTCTaGCATTACATTCAACCTTTGATCCCAGAACGACCC | + |
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Preference number: 3 (lower is better) Translates to: PQDDRCGANKDV*HYIQPLIPERP Trigger: GGGTCGTTCTGGGATCAAAGGTTGAATGTAATGTCAGACATCTTTATTTGCCCCACAGCGGTCATCTTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR CCA 72 bp | TGTGTTTCATGGATCTTGCCAGATCAGGAAGTGCTGTaGCAACAGGATGTGACATCATTGACCTACCGTACA | + |
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Preference number: 3 (lower is better) Translates to: CVSWILPDQEVL*QQDVTSLTYRT Trigger: TGTACGGTAGGTCAATGATGTCACATCCTGTTGCCACAGCACTTCCTGATCTGGCAAGATCCATGAAACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS-3UTR GCA 90 bp | GTCTGGGCCACCCTTGGGCAGGGGTCACTGGGTCCACGTGCCATGTGGTGGGCACACGACCATCTCCCCTaGCAAGGGCAGGCGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: VWATLGQGSLGPRAMWWAHDHLP*QGQAQA Trigger: CGCCTGCGCCTGCCCTTGGCAGGGGAGATGGTCGTG...TGCCCACCACATGGCACGTGGACCCAGTGACCCCTGCCCAAGGGTGGCCCAGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS-3UTR TCA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCCTTCATGGCCACCATaGGGGGCGGGGCCAGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: QESTHFIDPAHRSLCPSPPSWPP*GAGPAV Trigger: CACCGCTGGCCCCGCCCCTCATGGTGGCCATGAAGG...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 68% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS-3UTR GCA 90 bp | AGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCGCGCAGGTCCTGGGCTaGGGCCTCGTGGTCGCCATC | + |
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Preference number: 4 (lower is better) Translates to: RNPRTLLTPPTAPYAPAPAQVLG*GLVVAI Trigger: GATGGCGACCACGAGGCCGCAGCCCAGGACCTGCGC...GGGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 |
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| CDS-3UTR TCA 90 bp | AGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCCCAGGAGCCCCAGGATaGGCCACAGGTTGGCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RNPRTLLTPPTAPYAPAPPGAPG*ATGWRP Trigger: TGGCCGCCAACCTGTGGCTCATCCTGGGGCTCCTGG...GGGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCT 67% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 |
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| CDS-3UTR TCA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCCAGGAGCCCCAGGATaGGCCACAGGTTGGCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: QESTHFIDPAHRSLCPSPPGAPG*ATGWRP Trigger: TGGCCGCCAACCTGTGGCTCATCCTGGGGCTCCTGG...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 67% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 |
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| CDS-3UTR GCA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCGGGGCCAGGACCTCTaGGCGCTGCAGGTCCACAGT | + |
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Preference number: 4 (lower is better) Translates to: QESTHFIDPAHRSLCPSPRGQDL*ALQVHS Trigger: ACTGTGGACCTGCAGCGCGCAGAGGTCCTGGCCCCG...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS-3UTR GCA 90 bp | CCCCGACTGACCCTGGCAATCCCTCTGTCTCAGCTCCTGTCTGGGCCACCCTTGCGGGGCCAGGACCTCTaGGCGCTGCAGGTCCACAGT | + |
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Preference number: 4 (lower is better) Translates to: PRLTLAIPLSQLLSGPPLRGQDL*ALQVHS Trigger: ACTGTGGACCTGCAGCGCGCAGAGGTCCTGGCCCCG...CAAGGGTGGCCCAGACAGGAGCTGAGACAGAGGGATTGCCAGGGTCAGTCGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS-3UTR GCA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCAGCTGCCACGAGCCCTaGCCCCAGCACCGTAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: QESTHFIDPAHRSLCPSPSCHEP*PQHRSH Trigger: GTGGCTACGGTGCTGGGGGCAGGGCTCGTGGCAGCT...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS-3UTR GCA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCACGACCATCTCCCCTaGCAAGGGCAGGCGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: QESTHFIDPAHRSLCPSPHDHLP*QGQAQA Trigger: CGCCTGCGCCTGCCCTTGGCAGGGGAGATGGTCGTG...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 |
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| CDS-3UTR GCA 90 bp | AGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCCACGACCATCTCCCCTaGCAAGGGCAGGCGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: RNPRTLLTPPTAPYAPAPHDHLP*QGQAQA Trigger: CGCCTGCGCCTGCCCTTGGCAGGGGAGATGGTCGTG...GGGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCT 67% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 |
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| CDS-3UTR GCA 90 bp | AGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCCTCAGCTGCCCCTCATaGACCCAGCAGCGCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: RNPRTLLTPPTAPYAPAPLSCPS*TQQRRS Trigger: GGACCTGCGCTGCTGGGTGCATGAGGGGCAGCTGAG...GGGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCT 66% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 |
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| CDS-3UTR GCA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCTCAGCTGCCCCTCATaGACCCAGCAGCGCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QESTHFIDPAHRSLCPSPLSCPS*TQQRRS Trigger: GGACCTGCGCTGCTGGGTGCATGAGGGGCAGCTGAG...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 |
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| CDS-3UTR GCA 90 bp | AGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCCCACAGTGTTGTCCATaGAGGGCACGGGGCCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: RNPRTLLTPPTAPYAPAPPQCCP*RARGQR Trigger: GCGCTGGCCCCGTGCCCTGCATGGACAACACTGTGG...GGGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCT 66% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | GTCTGGGCCACCCTTGGGCAGGGGTCACTGGGTCCACGTGCCATGTGGTGGGCAGCCAGATCTGAAGAGTaGGATGCCAGGAGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VWATLGQGSLGPRAMWWAARSEE*DARSPR Trigger: CCTGGGGCTCCTGGCATCCCACTCTTCAGATCTGGC...TGCCCACCACATGGCACGTGGACCCAGTGACCCCTGCCCAAGGGTGGCCCAGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS-3UTR GCA 90 bp | GGACTTCCTCCCTTGGTTTTCCTTCAGAGCCCCACTTCCTGTCGAAGCCCTGCCGCGCAGGTCCTGGGCTaGGGCCTCGTGGTCGCCATC | + |
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Preference number: 4 (lower is better) Translates to: GLPPLVFLQSPTSCRSPAAQVLG*GLVVAI Trigger: GATGGCGACCACGAGGCCGCAGCCCAGGACCTGCGC...GGCAGGGCTTCGACAGGAAGTGGGGCTCTGAAGGAAAACCAAGGGAGGAAGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS-3UTR GCA 90 bp | CCTGTCAGTCATGGTCATGGTGAGGACTTCTGGGTGGGGGCAGAGCTGGGGTGGCTCAGCTGCCCCTCATaGACCCAGCAGCGCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: PVSHGHGEDFWVGAELGWLSCPS*TQQRRS Trigger: GGACCTGCGCTGCTGGGTGCATGAGGGGCAGCTGAG...CCACCCCAGCTCTGCCCCCACCCAGAAGTCCTCACCATGACCATGACTGACAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | AGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCACTCCACTGTCAACGTaGGCGGGGCCAGGACCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RNPRTLLTPPTAPYAPAPTPLST*AGPGPL Trigger: CAGAGGTCCTGGCCCCGCCCACGTTGACAGTGGAGT...GGGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | GTCTGGGCCACCCTTGGGCAGGGGTCACTGGGTCCACGTGCCATGTGGTGGGCATCTGAGCGGGAGCTCTaGTTGACCTGCAGGGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: VWATLGQGSLGPRAMWWASEREL*LTCRVY Trigger: GTACACCCTGCAGGTCAACCAGAGCTCCCGCTCAGA...TGCCCACCACATGGCACGTGGACCCAGTGACCCCTGCCCAAGGGTGGCCCAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR CAA 72 bp | AGCAGCACAGGAAGTCCCAGGAATCCACGCACTTTATaGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: SSTGSPRNPRTL*TPPTAPYAPAP Trigger: GGGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTGGGACTTCCTGTGCTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS-3UTR TCA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCGACCGCAGCCAGATCTaGAGAGTGGGATGCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: QESTHFIDPAHRSLCPSPDRSQI*RVGCQE Trigger: CTCCTGGCATCCCACTCTTCAGATCTGGCTGCGGTC...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 |
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| CDS-3UTR TCA 90 bp | AGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCGACCGCAGCCAGATCTaGAGAGTGGGATGCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RNPRTLLTPPTAPYAPAPDRSQI*RVGCQE Trigger: CTCCTGGCATCCCACTCTTCAGATCTGGCTGCGGTC...GGGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 |
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| CDS-3UTR GCA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCGGGCCTCAGAGCCGTTaGACTCCACTGTCAACGTGG | + |
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Preference number: 4 (lower is better) Translates to: QESTHFIDPAHRSLCPSPGPQSR*TPLSTW Trigger: CCACGTTGACAGTGGAGTGCAACGGCTCTGAGGCCC...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS-3UTR GCA 90 bp | CTGGGTCCACGTGCCATGTGGTGGGCAGGACTTCCTCCCTTGGTTTTCCTTCAGAGCTGCCACGAGCCCTaGCCCCAGCACCGTAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LGPRAMWWAGLPPLVFLQSCHEP*PQHRSH Trigger: GTGGCTACGGTGCTGGGGGCAGGGCTCGTGGCAGCT...CTGAAGGAAAACCAAGGGAGGAAGTCCTGCCCACCACATGGCACGTGGACCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCGCCAGATCTGAAGAGTaGGATGCCAGGAGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QESTHFIDPAHRSLCPSPARSEE*DARSPR Trigger: CCTGGGGCTCCTGGCATCCCACTCTTCAGATCTGGC...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | AGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCGCCAGATCTGAAGAGTaGGATGCCAGGAGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RNPRTLLTPPTAPYAPAPARSEE*DARSPR Trigger: CCTGGGGCTCCTGGCATCCCACTCTTCAGATCTGGC...GGGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCGGTTCTGGATGGGCGTaGTCACAGCAGTGGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: QESTHFIDPAHRSLCPSPGSGWA*SQQWVE Trigger: CTCCACCCACTGCTGTGACCACGCCCATCCAGAACC...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | AGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCCAGAGGGAGAGCGACTaGAATGAGCAGCGGGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RNPRTLLTPPTAPYAPAPQRESD*NEQRAS Trigger: GCTTGCCCGCTGCTCATTCCAGTCGCTCTCCCTCTG...GGGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCT 63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | AGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCCAAGGTCAGGGCTGTTaGGGGTGGAGCCAAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RNPRTLLTPPTAPYAPAPQGQGC*GWSQGQ Trigger: CTGTCCTTGGCTCCACCCCCAACAGCCCTGACCTTG...GGGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCT 63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCACGGTGATGGTGACCTaGGGGACAAGGTCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QESTHFIDPAHRSLCPSPTVMVT*GTRSGL Trigger: CAGCCCTGACCTTGTCCCCCAGGTCACCATCACCGT...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | AGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCACGGTGATGGTGACCTaGGGGACAAGGTCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNPRTLLTPPTAPYAPAPTVMVT*GTRSGL Trigger: CAGCCCTGACCTTGTCCCCCAGGTCACCATCACCGT...GGGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS-3UTR TCA 90 bp | TGGGCAGGACTTCCTCCCTTGGTTTTCCTTCAGAGCCCCACTTCCTGTCGAAGCCCAGGAGCCCCAGGATaGGCCACAGGTTGGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WAGLPPLVFLQSPTSCRSPGAPG*ATGWRP Trigger: TGGCCGCCAACCTGTGGCTCATCCTGGGGCTCCTGG...GCTTCGACAGGAAGTGGGGCTCTGAAGGAAAACCAAGGGAGGAAGTCCTGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCTACCCAAGGAGGCCATaGTGGAATCTGTTCCGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: QESTHFIDPAHRSLCPSPYPRRP*WNLFRA Trigger: CGCGCGGAACAGATTCCACCATGGCCTCCTTGGGTA...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | ACCCTTGGGCAGGGGTCACTGGGTCCACGTGCCATGTGGTGGGCAGGACTTCCTTACCCAAGGAGGCCATaGTGGAATCTGTTCCGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: TLGQGSLGPRAMWWAGLPYPRRP*WNLFRA Trigger: CGCGCGGAACAGATTCCACCATGGCCTCCTTGGGTA...AGGAAGTCCTGCCCACCACATGGCACGTGGACCCAGTGACCCCTGCCCAAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | AGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCTCTGAGCGGGAGCTCTaGTTGACCTGCAGGGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: RNPRTLLTPPTAPYAPAPSEREL*LTCRVY Trigger: GTACACCCTGCAGGTCAACCAGAGCTCCCGCTCAGA...GGGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS-3UTR GCA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCTGTCGAGGTCAAGGGTaGAGCCTTCATGGCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QESTHFIDPAHRSLCPSPCRGQG*SLHGHH Trigger: ATGGTGGCCATGAAGGCTGCACCCTTGACCTCGACA...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS-3UTR GCA 90 bp | AGGACTTCCTCCCTTGGTTTTCCTTCAGAGCCCCACTTCCTGTCGAAGCCCTGCCCACAGTGTTGTCCATaGAGGGCACGGGGCCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: RTSSLGFPSEPHFLSKPCPQCCP*RARGQR Trigger: GCGCTGGCCCCGTGCCCTGCATGGACAACACTGTGG...GCAGGGCTTCGACAGGAAGTGGGGCTCTGAAGGAAAACCAAGGGAGGAAGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | AGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCGTGAAGTTGGTCACATaGCAGAGGGAGAGCGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RNPRTLLTPPTAPYAPAPVKLVT*QRESDW Trigger: CCAGTCGCTCTCCCTCTGCCATGTGACCAACTTCAC...GGGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCGTGAAGTTGGTCACATaGCAGAGGGAGAGCGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: QESTHFIDPAHRSLCPSPVKLVT*QRESDW Trigger: CCAGTCGCTCTCCCTCTGCCATGTGACCAACTTCAC...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 |
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| CDS-3UTR GCA 90 bp | GGACTTCCTCCCTTGGTTTTCCTTCAGAGCCCCACTTCCTGTCGAAGCCCTGCCGGGCCTCAGAGCCGTTaGACTCCACTGTCAACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLPPLVFLQSPTSCRSPAGPQSR*TPLSTW Trigger: CCACGTTGACAGTGGAGTGCAACGGCTCTGAGGCCC...GGCAGGGCTTCGACAGGAAGTGGGGCTCTGAAGGAAAACCAAGGGAGGAAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | CTGGGTCCACGTGCCATGTGGTGGGCAGGACTTCCTCCCTTGGTTTTCCTTCAGCAAGGTCAGGGCTGTTaGGGGTGGAGCCAAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LGPRAMWWAGLPPLVFLQQGQGC*GWSQGQ Trigger: CTGTCCTTGGCTCCACCCCCAACAGCCCTGACCTTG...CTGAAGGAAAACCAAGGGAGGAAGTCCTGCCCACCACATGGCACGTGGACCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | TGGGCAGGACTTCCTCCCTTGGTTTTCCTTCAGAGCCCCACTTCCTGTCGAAGCACTCCACTGTCAACGTaGGCGGGGCCAGGACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WAGLPPLVFLQSPTSCRSTPLST*AGPGPL Trigger: CAGAGGTCCTGGCCCCGCCCACGTTGACAGTGGAGT...GCTTCGACAGGAAGTGGGGCTCTGAAGGAAAACCAAGGGAGGAAGTCCTGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR CAA 72 bp | GGTCCACGTGCCATGTGGTGGGCAGGACTTCCTCCCTaGGTTTTCCTTCAGAGCCCCACTTCCTGTCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: GPRAMWWAGLPP*VFLQSPTSCRS Trigger: GCTTCGACAGGAAGTGGGGCTCTGAAGGAAAACCAAGGGAGGAAGTCCTGCCCACCACATGGCACGTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS-3UTR TCA 90 bp | CCACCTACCCCCAAGATGACCGCTGTGGGGCAAATAAAGATGTCTGACATTACACCTTCATGGCCACCATaGGGGGCGGGGCCAGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPTPKMTAVGQIKMSDITPSWPP*GAGPAV Trigger: CACCGCTGGCCCCGCCCCTCATGGTGGCCATGAAGG...TGTAATGTCAGACATCTTTATTTGCCCCACAGCGGTCATCTTGGGGGTAGGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | AGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCTTGGGGACCCAGAAGTaGGGGATGGAGACATTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RNPRTLLTPPTAPYAPAPLGTQK*GMETLY Trigger: ATACAATGTCTCCATCCCCCACTTCTGGGTCCCCAA...GGGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS-3UTR GCA 90 bp | AGGACTTCCTCCCTTGGTTTTCCTTCAGAGCCCCACTTCCTGTCGAAGCCCTGCTGTCGAGGTCAAGGGTaGAGCCTTCATGGCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTSSLGFPSEPHFLSKPCCRGQG*SLHGHH Trigger: ATGGTGGCCATGAAGGCTGCACCCTTGACCTCGACA...GCAGGGCTTCGACAGGAAGTGGGGCTCTGAAGGAAAACCAAGGGAGGAAGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS-3UTR CCA 90 bp | GAGCCCCACTTCCTGTCGAAGCCCTGCCTCTTCCTGTCAGTCATGGTCATGGTGTTGGGGACCCAGAAGTaGGGGATGGAGACATTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: EPHFLSKPCLFLSVMVMVLGTQK*GMETLY Trigger: ATACAATGTCTCCATCCCCCACTTCTGGGTCCCCAA...CACCATGACCATGACTGACAGGAAGAGGCAGGGCTTCGACAGGAAGTGGGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| 3UTR CAA 72 bp | AGGTGCCTATTTGACAAACAATGTGTTTCATGGATCTaGCCAGATCAGGAAGTGCTGTGGCAACAGGATGTG | + |
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Preference number: 4 (lower is better) Translates to: RCLFDKQCVSWI*PDQEVLWQQDV Trigger: CACATCCTGTTGCCACAGCACTTCCTGATCTGGCAAGATCCATGAAACACATTGTTTGTCAAATAGGCACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS GCA 90 bp | GTTGCTTTCGGACCCCGCTCCCATTGGCAGCTCAGCTGCCCCTCATaGACCCAGCAGCGCAGGTCCTGGGCTGCGGCCTCGTGGTCGCCA | + |
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Preference number: 5 (lower is better) Translates to: VAFGPRSHWQLSCPS*TQQRRSWAAASWSP Trigger: TGGCGACCACGAGGCCGCAGCCCAGGACCTGCGCTGCTGGGTGCATGAGGGGCAGCTGAGCTGCCAATGGGAGCGGGGTCCGAAAGCAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 ENSMUST00000224877.2 ENSMUST00000225775.2 |
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| CDS CCA 90 bp | TGCCCCTCATGCACCCAGCAGCGCAGGTCCTGGGCTGCGGCCTCGTaGTCGCCATCCAGATCTGAAGAGTGGGATGCCAGGAGCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: CPSCTQQRRSWAAAS*SPSRSEEWDARSPR Trigger: CCTGGGGCTCCTGGCATCCCACTCTTCAGATCTGGATGGCGACCACGAGGCCGCAGCCCAGGACCTGCGCTGCTGGGTGCATGAGGGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224877.2 |
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| CDS-3UTR CAA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCGCGCGGCCACTGCCGTaGACGGTGATGGTGACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QESTHFIDPAHRSLCPSPARPLP*TVMVTW Trigger: CCAGGTCACCATCACCGTCAACGGCAGTGGCCGCGC...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS CCA 90 bp | CGGGAGCTCTGGTTGACCTGCAGGGTGTACCCAAGGAGGCCATGGTaGAATCTGTTCCGCGCGACCCATCGGGCATGGGCCTCAGAGCCG | + |
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Preference number: 5 (lower is better) Translates to: RELWLTCRVYPRRPW*NLFRATHRAWASEP Trigger: CGGCTCTGAGGCCCATGCCCGATGGGTCGCGCGGAACAGATTCCACCATGGCCTCCTTGGGTACACCCTGCAGGTCAACCAGAGCTCCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS-3UTR CAA 90 bp | CTGTCTGGGCCACCCTTGGGCAGGGGTCACTGGGTCCACGTGCCATGTGGTGGGACAAGGTCAGGGCTGTaGGGGGTGGAGCCAAGGACA | + |
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Preference number: 5 (lower is better) Translates to: LSGPPLGRGHWVHVPCGGTRSGL*GVEPRT Trigger: TGTCCTTGGCTCCACCCCCAACAGCCCTGACCTTGT...CCCACCACATGGCACGTGGACCCAGTGACCCCTGCCCAAGGGTGGCCCAGACAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS-3UTR CAA 90 bp | AGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCGAGATGGCACCAGCGTaGGGGACCCAGAAGTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: RNPRTLLTPPTAPYAPAPEMAPA*GTQKWG Trigger: CCCCCACTTCTGGGTCCCCAACGCTGGTGCCATCTC...GGGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS TCA 90 bp | GGGTGCAGCCTTCATGGCCACCATGAGGGGCGGGGCCAGCGGTGTTaGCATCAAGGCTGTGGTAGTGTGGACACTCGCGGTTGTGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: GCSLHGHHEGRGQRC*HQGCGSVDTRGCGQ Trigger: CTGCCCACAACCGCGAGTGTCCACACTACCACAGCCTTGATGTCAACACCGCTGGCCCCGCCCCTCATGGTGGCCATGAAGGCTGCACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS GCA 90 bp | CACCTCGCAGTCTTCAAGAGCTGGTTCCCACACGACCATCTCCCCTaGCAAGGGCAGGCGCAGGCGTGGAATGGGTGGGCACAGGCGGTA | + |
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Preference number: 5 (lower is better) Translates to: HLAVFKSWFPHDHLP*QGQAQAWNGWAQAV Trigger: TACCGCCTGTGCCCACCCATTCCACGCCTGCGCCTGCCCTTGGCAGGGGAGATGGTCGTGTGGGAACCAGCTCTTGAAGACTGCGAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS CCA 90 bp | CCCAGCTCAGTGTGTAGTGGGCGGGGTCGATATGCAGGTTCTGGATaGGCGTGGTCACAGCAGTGGGTGGAGCCTCACGGACCGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSSVCSGRGRYAGSG*AWSQQWVEPHGPQP Trigger: TGGCTGCGGTCCGTGAGGCTCCACCCACTGCTGTGACCACGCCCATCCAGAACCTGCATATCGACCCCGCCCACTACACACTGAGCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 ENSMUST00000225775.2 |
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| CDS CCA 90 bp | GAGCGGGAGCTCTGGTTGACCTGCAGGGTGTACCCAAGGAGGCCATaGTGGAATCTGTTCCGCGCGACCCATCGGGCATGGGCCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ERELWLTCRVYPRRP*WNLFRATHRAWASE Trigger: CTCTGAGGCCCATGCCCGATGGGTCGCGCGGAACAGATTCCACCATGGCCTCCTTGGGTACACCCTGCAGGTCAACCAGAGCTCCCGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS-3UTR CAA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCGAGCGGGAGCTCTGGTaGACCTGCAGGGTGTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: QESTHFIDPAHRSLCPSPERELW*TCRVYP Trigger: TGGGTACACCCTGCAGGTCAACCAGAGCTCCCGCTC...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS GCA 90 bp | GAGCCGCACATCACGCCAGAACATCCGGTAGTGCACGTCACCCGTTaGTTTCGGACCCCGCTCCCATTGGCAGCTCAGCTGCCCCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: EPHITPEHPVVHVTR*FRTPLPLAAQLPLM Trigger: CATGAGGGGCAGCTGAGCTGCCAATGGGAGCGGGGTCCGAAAGCAACGGGTGACGTGCACTACCGGATGTTCTGGCGTGATGTGCGGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 ENSMUST00000225775.2 |
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| CDS-3UTR CAA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCACAAGGTCAGGGCTGTaGGGGGTGGAGCCAAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: QESTHFIDPAHRSLCPSPTRSGL*GVEPRT Trigger: TGTCCTTGGCTCCACCCCCAACAGCCCTGACCTTGT...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS-3UTR CAA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCTGGGCCTCAGAGCCGTaGCACTCCACTGTCAACGTG | + |
|
Preference number: 5 (lower is better) Translates to: QESTHFIDPAHRSLCPSPWASEP*HSTVNV Trigger: CACGTTGACAGTGGAGTGCAACGGCTCTGAGGCCCA...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS GCA 90 bp | CTTCCGCACATCACGCCAGAACATCCGGTAGTGCACGTCACCCGTTaGTTTCGGACCCCGCTCCCATTGGCAGCTCAGCTGCCCCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: LPHITPEHPVVHVTR*FRTPLPLAAQLPLM Trigger: CATGAGGGGCAGCTGAGCTGCCAATGGGAGCGGGGTCCGAAAGCAACGGGTGACGTGCACTACCGGATGTTCTGGCGTGATGTGCGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223589.2 |
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| CDS CCA 90 bp | TCAGTGTGTAGTGGGCGGGGTCGATATGCAGGTTCTGGATGGGCGTaGTCACAGCAGTGGGTGGAGCCTCACGGACCGCAGCCAGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVCSGRGRYAGSGWA*SQQWVEPHGPQPDL Trigger: CAGATCTGGCTGCGGTCCGTGAGGCTCCACCCACTGCTGTGACCACGCCCATCCAGAACCTGCATATCGACCCCGCCCACTACACACTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 ENSMUST00000225775.2 |
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| CDS-3UTR CAA 90 bp | GTCTGGGCCACCCTTGGGCAGGGGTCACTGGGTCCACGTGCCATGTGGTGGGCATGGGGGATGGAGACATaGTATTCCTGTGGCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VWATLGQGSLGPRAMWWAWGMET*YSCGSE Trigger: CTCAGAGCCACAGGAATACAATGTCTCCATCCCCCA...TGCCCACCACATGGCACGTGGACCCAGTGACCCCTGCCCAAGGGTGGCCCAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS TCA 90 bp | GGGGACCCAGAAGTGGGGGATGGAGACATTGTATTCCTGTGGCTCTaGGCGGGAGCTCTGGTTGACCTGCAGGGTGTACCCAAGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GDPEVGDGDIVFLWL*AGALVDLQGVPKEA Trigger: GGCCTCCTTGGGTACACCCTGCAGGTCAACCAGAGCTCCCGCTCAGAGCCACAGGAATACAATGTCTCCATCCCCCACTTCTGGGTCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS-3UTR CAA 90 bp | AGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCCAGGAAGACGGTGAAGTaGGTCACATGGCAGAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RNPRTLLTPPTAPYAPAPRKTVK*VTWQRE Trigger: CTCCCTCTGCCATGTGACCAACTTCACCGTCTTCCT...GGGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 |
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| CDS-3UTR CAA 90 bp | CTGGGTCCACGTGCCATGTGGTGGGCAGGACTTCCTCCCTTGGTTTTCCTTCAGTGGGCCTCAGAGCCGTaGCACTCCACTGTCAACGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGPRAMWWAGLPPLVFLQWASEP*HSTVNV Trigger: CACGTTGACAGTGGAGTGCAACGGCTCTGAGGCCCA...CTGAAGGAAAACCAAGGGAGGAAGTCCTGCCCACCACATGGCACGTGGACCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS-3UTR CAA 90 bp | CAGGAATCCACGCACTTTATTGACCCCGCCCACCGCTCCCTATGCCCCAGCCCCTGGGGGATGGAGACATaGTATTCCTGTGGCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QESTHFIDPAHRSLCPSPWGMET*YSCGSE Trigger: CTCAGAGCCACAGGAATACAATGTCTCCATCCCCCA...GGGGCTGGGGCATAGGGAGCGGTGGGCGGGGTCAATAAAGTGCGTGGATTCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 |
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| CDS-3UTR CAA 90 bp | CACTTCCTGTCGAAGCCCTGCCTCTTCCTGTCAGTCATGGTCATGGTGAGGACTGAGCGGGAGCTCTGGTaGACCTGCAGGGTGTACCCA | + |
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Preference number: 5 (lower is better) Translates to: HFLSKPCLFLSVMVMVRTERELW*TCRVYP Trigger: TGGGTACACCCTGCAGGTCAACCAGAGCTCCCGCTC...AGTCCTCACCATGACCATGACTGACAGGAAGAGGCAGGGCTTCGACAGGAAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS CCA 90 bp | TGGGGGATGGAGACATTGTATTCCTGTGGCTCTGAGCGGGAGCTCTaGTTGACCTGCAGGGTGTACCCAAGGAGGCCATGGTGGAATCTG | + |
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Preference number: 5 (lower is better) Translates to: WGMETLYSCGSEREL*LTCRVYPRRPWWNL Trigger: CAGATTCCACCATGGCCTCCTTGGGTACACCCTGCAGGTCAACCAGAGCTCCCGCTCAGAGCCACAGGAATACAATGTCTCCATCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS-3UTR CAA 90 bp | TTCCTCCCTTGGTTTTCCTTCAGAGCCCCACTTCCTGTCGAAGCCCTGCCTCTTAGGAAGACGGTGAAGTaGGTCACATGGCAGAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: FLPWFSFRAPLPVEALPLRKTVK*VTWQRE Trigger: CTCCCTCTGCCATGTGACCAACTTCACCGTCTTCCT...AAGAGGCAGGGCTTCGACAGGAAGTGGGGCTCTGAAGGAAAACCAAGGGAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224163.2 |
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| CDS GCA 72 bp | GGACCCCGCTCCCATTGGCAGCTCAGCTGCCCCTCATaGACCCAGCAGCGCAGGTCCTGGGCTGCGGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: GPRSHWQLSCPS*TQQRRSWAAAS Trigger: CGAGGCCGCAGCCCAGGACCTGCGCTGCTGGGTGCATGAGGGGCAGCTGAGCTGCCAATGGGAGCGGGGTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 ENSMUST00000224877.2 ENSMUST00000225775.2 |
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| CDS GCA 72 bp | TCCGCGCGACCCATCGGGCATGGGCCTCAGAGCCGTTaGACTCCACTGTCAACGTGGGCGGGGCCAGGACCT | + |
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Preference number: 6 (lower is better) Translates to: SARPIGHGPQSR*TPLSTWAGPGP Trigger: AGGTCCTGGCCCCGCCCACGTTGACAGTGGAGTGCAACGGCTCTGAGGCCCATGCCCGATGGGTCGCGCGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS CAA 72 bp | TCCATGCAGGGCACGGGGCCAGCGCGGCCACTGCCGTaGACGGTGATGGTGACCTGGGGGACAAGGTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SMQGTGPARPLP*TVMVTWGTRSG Trigger: CCCTGACCTTGTCCCCCAGGTCACCATCACCGTCAACGGCAGTGGCCGCGCTGGCCCCGTGCCCTGCATGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS CAA 72 bp | TTCCGCGCGACCCATCGGGCATGGGCCTCAGAGCCGTaGCACTCCACTGTCAACGTGGGCGGGGCCAGGACC | + |
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Preference number: 6 (lower is better) Translates to: FRATHRAWASEP*HSTVNVGGART Trigger: GGTCCTGGCCCCGCCCACGTTGACAGTGGAGTGCAACGGCTCTGAGGCCCATGCCCGATGGGTCGCGCGGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS GCA 72 bp | ACTGTCAACGTGGGCGGGGCCAGGACCTCTGCGCGCTaGAGGTCCACAGTGTTGTCCATGCAGGGCACGGGG | + |
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Preference number: 6 (lower is better) Translates to: TVNVGGARTSAR*RSTVLSMQGTG Trigger: CCCCGTGCCCTGCATGGACAACACTGTGGACCTGCAGCGCGCAGAGGTCCTGGCCCCGCCCACGTTGACAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS CCA 72 bp | CCAGCGCGGCCACTGCCGTTGACGGTGATGGTGACCTaGGGGACAAGGTCAGGGCTGTTGGGGGTGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: PARPLPLTVMVT*GTRSGLLGVEP Trigger: TGGCTCCACCCCCAACAGCCCTGACCTTGTCCCCCAGGTCACCATCACCGTCAACGGCAGTGGCCGCGCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS CAA 90 bp | ACAGTGTTGTCCATGCAGGGCACGGGGCCAGCGCGGCCACTGCCGTaGACGGTGATGGTGACCTGGGGGACAAGGTCAGGGCTGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: TVLSMQGTGPARPLP*TVMVTWGTRSGLLG Trigger: CCCCAACAGCCCTGACCTTGTCCCCCAGGTCACCATCACCGTCAACGGCAGTGGCCGCGCTGGCCCCGTGCCCTGCATGGACAACACTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS GCA 72 bp | GTTGCTTTCGGACCCCGCTCCCATTGGCAGCTCAGCTaGCCCTCATGCACCCAGCAGCGCAGGTCCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: VAFGPRSHWQLS*PSCTQQRRSWA Trigger: AGCCCAGGACCTGCGCTGCTGGGTGCATGAGGGGCAGCTGAGCTGCCAATGGGAGCGGGGTCCGAAAGCAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 ENSMUST00000224877.2 ENSMUST00000225775.2 |
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| CDS GCA 72 bp | GCACTCCACTGTCAACGTGGGCGGGGCCAGGACCTCTaGGCGCTGCAGGTCCACAGTGTTGTCCATGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: ALHCQRGRGQDL*ALQVHSVVHAG Trigger: CCCTGCATGGACAACACTGTGGACCTGCAGCGCGCAGAGGTCCTGGCCCCGCCCACGTTGACAGTGGAGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS CCA 72 bp | TGCACGTCACCCGTTGCTTTCGGACCCCGCTCCCATTaGCAGCTCAGCTGCCCCTCATGCACCCAGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: CTSPVAFGPRSH*QLSCPSCTQQR Trigger: GCGCTGCTGGGTGCATGAGGGGCAGCTGAGCTGCCAATGGGAGCGGGGTCCGAAAGCAACGGGTGACGTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 ENSMUST00000224877.2 ENSMUST00000225775.2 |
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| CDS CCA 72 bp | TGCACCCAGCAGCGCAGGTCCTGGGCTGCGGCCTCGTaGTCGCCATCCAGATCTGAAGAGTGGGATGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: CTQQRRSWAAAS*SPSRSEEWDAR Trigger: CCTGGCATCCCACTCTTCAGATCTGGATGGCGACCACGAGGCCGCAGCCCAGGACCTGCGCTGCTGGGTGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224877.2 |
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| CDS CAA 72 bp | GTGCACGTCACCCGTTGCTTTCGGACCCCGCTCCCATaGGCAGCTCAGCTGCCCCTCATGCACCCAGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: VHVTRCFRTPLP*AAQLPLMHPAA Trigger: CGCTGCTGGGTGCATGAGGGGCAGCTGAGCTGCCAATGGGAGCGGGGTCCGAAAGCAACGGGTGACGTGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 ENSMUST00000224877.2 ENSMUST00000225775.2 |
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| CDS CCA 72 bp | GTCCTGGGCTGCGGCCTCGTGGTCGCCATCATCATCTaGGGGGAACTGGATGGATCCTGCCACAGCCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: VLGCGLVVAIII*GELDGSCHSPV Trigger: GACAGGGCTGTGGCAGGATCCATCCAGTTCCCCCCAGATGATGATGGCGACCACGAGGCCGCAGCCCAGGAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 ENSMUST00000225775.2 |
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| CDS GCA 72 bp | GTCTTCAAGAGCTGGTTCCCACACGACCATCTCCCCTaGCAAGGGCAGGCGCAGGCGTGGAATGGGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: VFKSWFPHDHLP*QGQAQAWNGWA Trigger: TGCCCACCCATTCCACGCCTGCGCCTGCCCTTGGCAGGGGAGATGGTCGTGTGGGAACCAGCTCTTGAAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS CCA 72 bp | ACGGTGAAGTTGGTCACATGGCAGAGGGAGAGCGACTaGAATGAGCAGCGGGCAAGCCCGGGGTCAGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: TVKLVTWQRESD*NEQRASPGSAQ Trigger: CTGGGCTGACCCCGGGCTTGCCCGCTGCTCATTCCAGTCGCTCTCCCTCTGCCATGTGACCAACTTCACCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 ENSMUST00000225775.2 |
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| CDS CCA 72 bp | TGGTTGACCTGCAGGGTGTACCCAAGGAGGCCATGGTaGAATCTGTTCCGCGCGACCCATCGGGCATGGGCC | + |
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Preference number: 6 (lower is better) Translates to: WLTCRVYPRRPW*NLFRATHRAWA Trigger: GGCCCATGCCCGATGGGTCGCGCGGAACAGATTCCACCATGGCCTCCTTGGGTACACCCTGCAGGTCAACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS CAA 90 bp | CGAGCCGCACATCACGCCAGAACATCCGGTAGTGCACGTCACCCGTaGCTTTCGGACCCCGCTCCCATTGGCAGCTCAGCTGCCCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: RAAHHARTSGSARHP*LSDPAPIGSSAAPH Trigger: ATGAGGGGCAGCTGAGCTGCCAATGGGAGCGGGGTCCGAAAGCAACGGGTGACGTGCACTACCGGATGTTCTGGCGTGATGTGCGGCTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 ENSMUST00000225775.2 |
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| CDS CAA 90 bp | CTGCCGTTGACGGTGATGGTGACCTGGGGGACAAGGTCAGGGCTGTaGGGGGTGGAGCCAAGGACAGTGTCGAGGTCAAGGGTGCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LPLTVMVTWGTRSGL*GVEPRTVSRSRVQP Trigger: AGGCTGCACCCTTGACCTCGACACTGTCCTTGGCTCCACCCCCAACAGCCCTGACCTTGTCCCCCAGGTCACCATCACCGTCAACGGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS TCA 72 bp | CTTCATGGCCACCATGAGGGGCGGGGCCAGCGGTGTTaGCATCAAGGCTGTGGTAGTGTGGACACTCGCGGT | + |
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Preference number: 6 (lower is better) Translates to: LHGHHEGRGQRC*HQGCGSVDTRG Trigger: ACCGCGAGTGTCCACACTACCACAGCCTTGATGTCAACACCGCTGGCCCCGCCCCTCATGGTGGCCATGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 ENSMUST00000225775.2 |
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| CDS CCA 72 bp | GTGTGTAGTGGGCGGGGTCGATATGCAGGTTCTGGATaGGCGTGGTCACAGCAGTGGGTGGAGCCTCACGGA | + |
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Preference number: 6 (lower is better) Translates to: VCSGRGRYAGSG*AWSQQWVEPHG Trigger: TCCGTGAGGCTCCACCCACTGCTGTGACCACGCCCATCCAGAACCTGCATATCGACCCCGCCCACTACACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 ENSMUST00000225775.2 |
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| CDS CCA 72 bp | CTCTGGTTGACCTGCAGGGTGTACCCAAGGAGGCCATaGTGGAATCTGTTCCGCGCGACCCATCGGGCATGG | + |
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Preference number: 6 (lower is better) Translates to: LWLTCRVYPRRP*WNLFRATHRAW Trigger: CCATGCCCGATGGGTCGCGCGGAACAGATTCCACCATGGCCTCCTTGGGTACACCCTGCAGGTCAACCAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS CAA 72 bp | ACGGTGATGGTGACCTGGGGGACAAGGTCAGGGCTGTaGGGGGTGGAGCCAAGGACAGTGTCGAGGTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: TVMVTWGTRSGL*GVEPRTVSRSR Trigger: CCTTGACCTCGACACTGTCCTTGGCTCCACCCCCAACAGCCCTGACCTTGTCCCCCAGGTCACCATCACCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS CAA 90 bp | ACTTCCGCACATCACGCCAGAACATCCGGTAGTGCACGTCACCCGTaGCTTTCGGACCCCGCTCCCATTGGCAGCTCAGCTGCCCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: TSAHHARTSGSARHP*LSDPAPIGSSAAPH Trigger: ATGAGGGGCAGCTGAGCTGCCAATGGGAGCGGGGTCCGAAAGCAACGGGTGACGTGCACTACCGGATGTTCTGGCGTGATGTGCGGAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223589.2 |
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| CDS TCA 72 bp | GAAGTTGGTCACATGGCAGAGGGAGAGCGACTGGAATaGGCAGCGGGCAAGCCCGGGGTCAGCCCAGACAAA | + |
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Preference number: 6 (lower is better) Translates to: EVGHMAEGERLE*AAGKPGVSPDK Trigger: TTTGTCTGGGCTGACCCCGGGCTTGCCCGCTGCTCATTCCAGTCGCTCTCCCTCTGCCATGTGACCAACTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 ENSMUST00000225775.2 |
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| CDS CCA 72 bp | CTGTCCTTCCCCAGGAAGACGGTGAAGTTGGTCACATaGCAGAGGGAGAGCGACTGGAATGAGCAGCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LSFPRKTVKLVT*QRESDWNEQRA Trigger: TGCCCGCTGCTCATTCCAGTCGCTCTCCCTCTGCCATGTGACCAACTTCACCGTCTTCCTGGGGAAGGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 ENSMUST00000225775.2 |
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| CDS CAA 72 bp | GCCACAGCCCTGTCCTTCCCCAGGAAGACGGTGAAGTaGGTCACATGGCAGAGGGAGAGCGACTGGAATGAG | + |
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Preference number: 6 (lower is better) Translates to: ATALSFPRKTVK*VTWQRESDWNE Trigger: CTCATTCCAGTCGCTCTCCCTCTGCCATGTGACCAACTTCACCGTCTTCCTGGGGAAGGACAGGGCTGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090591.4 ENSMUST00000223589.2 ENSMUST00000224163.2 ENSMUST00000225775.2 |
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| CDS TCA 72 bp | CATTGTATTCCTGTGGCTCTGAGCGGGAGCTCTGGTTaGCCTGCAGGGTGTACCCAAGGAGGCCATGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: HCIPVALSGSSG*PAGCTQGGHGG Trigger: TCCACCATGGCCTCCTTGGGTACACCCTGCAGGTCAACCAGAGCTCCCGCTCAGAGCCACAGGAATACAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS CCA 72 bp | GAGACATTGTATTCCTGTGGCTCTGAGCGGGAGCTCTaGTTGACCTGCAGGGTGTACCCAAGGAGGCCATGG | + |
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Preference number: 6 (lower is better) Translates to: ETLYSCGSEREL*LTCRVYPRRPW Trigger: CCATGGCCTCCTTGGGTACACCCTGCAGGTCAACCAGAGCTCCCGCTCAGAGCCACAGGAATACAATGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS CCA 72 bp | CGGAAGGAGATGGCACCAGCGTTGGGGACCCAGAAGTaGGGGATGGAGACATTGTATTCCTGTGGCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: RKEMAPALGTQK*GMETLYSCGSE Trigger: CTCAGAGCCACAGGAATACAATGTCTCCATCCCCCACTTCTGGGTCCCCAACGCTGGTGCCATCTCCTTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS CAA 72 bp | ACATTGTATTCCTGTGGCTCTGAGCGGGAGCTCTGGTaGACCTGCAGGGTGTACCCAAGGAGGCCATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: TLYSCGSERELW*TCRVYPRRPWW Trigger: CCACCATGGCCTCCTTGGGTACACCCTGCAGGTCAACCAGAGCTCCCGCTCAGAGCCACAGGAATACAATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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| CDS CAA 72 bp | GACCTCGACTTGACCCGGAAGGAGATGGCACCAGCGTaGGGGACCCAGAAGTGGGGGATGGAGACATTGTAT | + |
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Preference number: 6 (lower is better) Translates to: DLDLTRKEMAPA*GTQKWGMETLY Trigger: ATACAATGTCTCCATCCCCCACTTCTGGGTCCCCAACGCTGGTGCCATCTCCTTCCGGGTCAAGTCGAGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090591.4 ENSMUST00000224163.2 ENSMUST00000224877.2 |
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