Pregenerated sensors for IL36RN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026983Ensembl transcript IDs: ENSMUST00000028360.8, ENSMUST00000114490.7, ENSMUST00000123053.8, ENSMUST00000147885.4, ENSMUST00000168941.8
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTGTCCCACAAGATAGGCACTGGCTTCCTCCTTGAACGCCCAGGATaGCAGGGGACAGACTGGCATCCAGTGCCCGATTTGGGACAACAC | + |
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Preference number: 5 (lower is better) Translates to: LSHKIGTGFLLERPG*QGTDWHPVPDLGQH Trigger: GTGTTGTCCCAAATCGGGCACTGGATGCCAGTCTGTCCCCTGTCATCCTGGGCGTTCAAGGAGGAAGCCAGTGCCTATCTTGTGGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000147885.4 ENSMUST00000168941.8 |
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| CDS TCA 90 bp | ATTGGCCCTTTCTCTGTCCCACAAGATAGGCACTGGCTTCCTCCTTaGACGCCCAGGATGACAGGGGACAGACTGGCATCCAGTGCCCGA | + |
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Preference number: 5 (lower is better) Translates to: IGPFSVPQDRHWLPP*TPRMTGDRLASSAR Trigger: TCGGGCACTGGATGCCAGTCTGTCCCCTGTCATCCTGGGCGTTCAAGGAGGAAGCCAGTGCCTATCTTGTGGGACAGAGAAAGGGCCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000147885.4 ENSMUST00000168941.8 |
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| CDS TCA 90 bp | GCTGGAGGTAAGACCCATATCCCGCCGGTAGAAGGTGAAGCTCTTTaGTTCCTTGGCCCCGAGGTAGAGCTCCATGATGTTCACTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: AGGKTHIPPVEGEAL*FLGPEVELHDVHWL Trigger: GAGCCAGTGAACATCATGGAGCTCTACCTCGGGGCCAAGGAATCAAAGAGCTTCACCTTCTACCGGCGGGATATGGGTCTTACCTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000168941.8 |
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| CDS CCA 90 bp | AACGCCCAGGATGACAGGGGACAGACTGGCATCCAGTGCCCGATTTaGGACAACACTGATCTCCTCACCTTTAATGACCTTCTCTGCGTG | + |
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Preference number: 5 (lower is better) Translates to: NAQDDRGQTGIQCPI*DNTDLLTFNDLLCV Trigger: CACGCAGAGAAGGTCATTAAAGGTGAGGAGATCAGTGTTGTCCCAAATCGGGCACTGGATGCCAGTCTGTCCCCTGTCATCCTGGGCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000123053.8 ENSMUST00000147885.4 ENSMUST00000168941.8 |
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| CDS GCA 90 bp | TCCTCCTTGAACGCCCAGGATGACAGGGGACAGACTGGCATCCAGTaGCCGATTTGGGACAACACTGATCTCCTCACCTTTAATGACCTT | + |
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Preference number: 5 (lower is better) Translates to: SSLNAQDDRGQTGIQ*PIWDNTDLLTFNDL Trigger: AAGGTCATTAAAGGTGAGGAGATCAGTGTTGTCCCAAATCGGGCACTGGATGCCAGTCTGTCCCCTGTCATCCTGGGCGTTCAAGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000123053.8 ENSMUST00000147885.4 ENSMUST00000168941.8 |
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| CDS GCA 90 bp | CCGATTTGGGACAACACTGATCTCCTCACCTTTAATGACCTTCTCTaGGTGCAGTCCTCCAGCCAGCAGCTGGTTATTGTGCAGATACAG | + |
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Preference number: 5 (lower is better) Translates to: PIWDNTDLLTFNDLL*VQSSSQQLVIVQIQ Trigger: CTGTATCTGCACAATAACCAGCTGCTGGCTGGAGGACTGCACGCAGAGAAGGTCATTAAAGGTGAGGAGATCAGTGTTGTCCCAAATCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000123053.8 ENSMUST00000147885.4 ENSMUST00000168941.8 |
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| CDS GCA 90 bp | ATGACCTTCTCTGCGTGCAGTCCTCCAGCCAGCAGCTGGTTATTGTaGAGATACAGTACCTTCAAGGCTGAATCCTTCATTCGGAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: MTFSACSPPASSWLL*RYSTFKAESFIRKH Trigger: ATGCTTCCGAATGAAGGATTCAGCCTTGAAGGTACTGTATCTGCACAATAACCAGCTGCTGGCTGGAGGACTGCACGCAGAGAAGGTCAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000123053.8 ENSMUST00000147885.4 ENSMUST00000168941.8 |
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| CDS GCA 90 bp | TTTGGGACAACACTGATCTCCTCACCTTTAATGACCTTCTCTGCGTaGAGTCCTCCAGCCAGCAGCTGGTTATTGTGCAGATACAGTACC | + |
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Preference number: 5 (lower is better) Translates to: FGTTLISSPLMTFSA*SPPASSWLLCRYST Trigger: GGTACTGTATCTGCACAATAACCAGCTGCTGGCTGGAGGACTGCACGCAGAGAAGGTCATTAAAGGTGAGGAGATCAGTGTTGTCCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000123053.8 ENSMUST00000147885.4 ENSMUST00000168941.8 |
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| CDS CCA 90 bp | TCACCTTTAATGACCTTCTCTGCGTGCAGTCCTCCAGCCAGCAGCTaGTTATTGTGCAGATACAGTACCTTCAAGGCTGAATCCTTCATT | + |
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Preference number: 5 (lower is better) Translates to: SPLMTFSACSPPASS*LLCRYSTFKAESFI Trigger: AATGAAGGATTCAGCCTTGAAGGTACTGTATCTGCACAATAACCAGCTGCTGGCTGGAGGACTGCACGCAGAGAAGGTCATTAAAGGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000123053.8 ENSMUST00000147885.4 ENSMUST00000168941.8 |
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| CDS TCA 72 bp | AAGATAGGCACTGGCTTCCTCCTTGAACGCCCAGGATaGCAGGGGACAGACTGGCATCCAGTGCCCGATTTG | + |
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Preference number: 6 (lower is better) Translates to: KIGTGFLLERPG*QGTDWHPVPDL Trigger: CAAATCGGGCACTGGATGCCAGTCTGTCCCCTGTCATCCTGGGCGTTCAAGGAGGAAGCCAGTGCCTATCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000123053.8 ENSMUST00000147885.4 ENSMUST00000168941.8 |
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| CDS TCA 72 bp | TTCTCTGTCCCACAAGATAGGCACTGGCTTCCTCCTTaGACGCCCAGGATGACAGGGGACAGACTGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: FSVPQDRHWLPP*TPRMTGDRLAS Trigger: GGATGCCAGTCTGTCCCCTGTCATCCTGGGCGTTCAAGGAGGAAGCCAGTGCCTATCTTGTGGGACAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000147885.4 ENSMUST00000168941.8 |
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| CDS GCA 72 bp | AACGCCCAGGATGACAGGGGACAGACTGGCATCCAGTaGCCGATTTGGGACAACACTGATCTCCTCACCTTT | + |
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Preference number: 6 (lower is better) Translates to: NAQDDRGQTGIQ*PIWDNTDLLTF Trigger: AAAGGTGAGGAGATCAGTGTTGTCCCAAATCGGGCACTGGATGCCAGTCTGTCCCCTGTCATCCTGGGCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000123053.8 ENSMUST00000147885.4 ENSMUST00000168941.8 |
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| CDS TCA 72 bp | AAGACCCATATCCCGCCGGTAGAAGGTGAAGCTCTTTaGTTCCTTGGCCCCGAGGTAGAGCTCCATGATGTT | + |
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Preference number: 6 (lower is better) Translates to: KTHIPPVEGEAL*FLGPEVELHDV Trigger: AACATCATGGAGCTCTACCTCGGGGCCAAGGAATCAAAGAGCTTCACCTTCTACCGGCGGGATATGGGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000168941.8 |
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| CDS CCA 72 bp | TTCCTTGGCCCCGAGGTAGAGCTCCATGATGTTCACTaGCTCAAGTTTCAGAATTGGCCCTTTCTCTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: FLGPEVELHDVH*LKFQNWPFLCP Trigger: GGGACAGAGAAAGGGCCAATTCTGAAACTTGAGCCAGTGAACATCATGGAGCTCTACCTCGGGGCCAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000168941.8 |
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| CDS GCA 72 bp | GACAACACTGATCTCCTCACCTTTAATGACCTTCTCTaGGTGCAGTCCTCCAGCCAGCAGCTGGTTATTGTG | + |
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Preference number: 6 (lower is better) Translates to: DNTDLLTFNDLL*VQSSSQQLVIV Trigger: CACAATAACCAGCTGCTGGCTGGAGGACTGCACGCAGAGAAGGTCATTAAAGGTGAGGAGATCAGTGTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000123053.8 ENSMUST00000147885.4 ENSMUST00000168941.8 |
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| CDS CCA 72 bp | GATGACAGGGGACAGACTGGCATCCAGTGCCCGATTTaGGACAACACTGATCTCCTCACCTTTAATGACCTT | + |
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Preference number: 6 (lower is better) Translates to: DDRGQTGIQCPI*DNTDLLTFNDL Trigger: AAGGTCATTAAAGGTGAGGAGATCAGTGTTGTCCCAAATCGGGCACTGGATGCCAGTCTGTCCCCTGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000123053.8 ENSMUST00000147885.4 ENSMUST00000168941.8 |
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| CDS CAA 72 bp | TTCTCTGCGTGCAGTCCTCCAGCCAGCAGCTGGTTATaGTGCAGATACAGTACCTTCAAGGCTGAATCCTTC | + |
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Preference number: 6 (lower is better) Translates to: FSACSPPASSWL*CRYSTFKAESF Trigger: GAAGGATTCAGCCTTGAAGGTACTGTATCTGCACAATAACCAGCTGCTGGCTGGAGGACTGCACGCAGAGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000123053.8 ENSMUST00000147885.4 ENSMUST00000168941.8 |
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| CDS TCA 72 bp | AGCTCTTTGATTCCTTGGCCCCGAGGTAGAGCTCCATaGTGTTCACTGGCTCAAGTTTCAGAATTGGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: SSLIPWPRGRAP*CSLAQVSELAL Trigger: AAGGGCCAATTCTGAAACTTGAGCCAGTGAACATCATGGAGCTCTACCTCGGGGCCAAGGAATCAAAGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000168941.8 |
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| CDS GCA 72 bp | TCTGCGTGCAGTCCTCCAGCCAGCAGCTGGTTATTGTaGAGATACAGTACCTTCAAGGCTGAATCCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: SACSPPASSWLL*RYSTFKAESFI Trigger: AATGAAGGATTCAGCCTTGAAGGTACTGTATCTGCACAATAACCAGCTGCTGGCTGGAGGACTGCACGCAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000123053.8 ENSMUST00000147885.4 ENSMUST00000168941.8 |
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| CDS CAA 90 bp | TTAATGACCTTCTCTGCGTGCAGTCCTCCAGCCAGCAGCTGGTTATaGTGCAGATACAGTACCTTCAAGGCTGAATCCTTCATTCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LMTFSACSPPASSWL*CRYSTFKAESFIRK Trigger: CTTCCGAATGAAGGATTCAGCCTTGAAGGTACTGTATCTGCACAATAACCAGCTGCTGGCTGGAGGACTGCACGCAGAGAAGGTCATTAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028360.8 ENSMUST00000114490.7 ENSMUST00000123053.8 ENSMUST00000147885.4 ENSMUST00000168941.8 |
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