Pregenerated sensors for IL36G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044103Ensembl transcript IDs: ENSMUST00000057567.3
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCATGGGAGGATAGTCACGCTGACTGGGGTTACTCTGTGGCTTCGTaGAACTGTCACAAGGGCCTGATTACGAAAGATCCACACCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AWEDSHADWGYSVAS*NCHKGLITKDPHLL Trigger: CAGCAGGTGTGGATCTTTCGTAATCAGGCCCTTGTGACAGTTCCACGAAGCCACAGAGTAACCCCAGTCAGCGTGACTATCCTCCCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057567.3 |
||
| CDS TCA 90 bp | CTGACTGGGGTTACTCTGTGGCTTCGTGGAACTGTCACAAGGGCCTaGTTACGAAAGATCCACACCTGCTGGTCCAAGTCAAAAACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LTGVTLWLRGTVTRA*LRKIHTCWSKSKTS Trigger: GGAGGTTTTTGACTTGGACCAGCAGGTGTGGATCTTTCGTAATCAGGCCCTTGTGACAGTTCCACGAAGCCACAGAGTAACCCCAGTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057567.3 |
||
| CDS CCA 90 bp | TTCAAGAGACTCTGGGTACTTGCATGGGAGGATAGTCACGCTGACTaGGGTTACTCTGTGGCTTCGTGGAACTGTCACAAGGGCCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: FKRLWVLAWEDSHAD*GYSVASWNCHKGLI Trigger: AATCAGGCCCTTGTGACAGTTCCACGAAGCCACAGAGTAACCCCAGTCAGCGTGACTATCCTCCCATGCAAGTACCCAGAGTCTCTTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057567.3 |
||
| CDS CCA 90 bp | AATGGCAATCCCTTTGTCCTGTTCAAGAGACTCTGGGTACTTGCATaGGAGGATAGTCACGCTGACTGGGGTTACTCTGTGGCTTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NGNPFVLFKRLWVLA*EDSHADWGYSVASW Trigger: CCACGAAGCCACAGAGTAACCCCAGTCAGCGTGACTATCCTCCCATGCAAGTACCCAGAGTCTCTTGAACAGGACAAAGGGATTGCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057567.3 |
||
| CDS CCA 90 bp | TTCAAAGGTGGATGTTCCACCTGTCCGGGTGTGGTAAAACAGGAATaGCTTCATTGGCTCAGGGTGGTGGTACAAATCCAAAATCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FKGGCSTCPGVVKQE*LHWLRVVVQIQNLL Trigger: GAGAAGATTTTGGATTTGTACCACCACCCTGAGCCAATGAAGCCATTCCTGTTTTACCACACCCGGACAGGTGGAACATCCACCTTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057567.3 |
||
| CDS CCA 90 bp | AATTCCCAAATAAATGGCAATCCCTTTGTCCTGTTCAAGAGACTCTaGGTACTTGCATGGGAGGATAGTCACGCTGACTGGGGTTACTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSQINGNPFVLFKRL*VLAWEDSHADWGYS Trigger: AGAGTAACCCCAGTCAGCGTGACTATCCTCCCATGCAAGTACCCAGAGTCTCTTGAACAGGACAAAGGGATTGCCATTTATTTGGGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057567.3 |
||
| CDS CCA 90 bp | CCTTACAAAACAGGCATTTATCTGGATTCTGAATTCCCAAATAAATaGCAATCCCTTTGTCCTGTTCAAGAGACTCTGGGTACTTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: PYKTGIYLDSEFPNK*QSLCPVQETLGTCM Trigger: CATGCAAGTACCCAGAGTCTCTTGAACAGGACAAAGGGATTGCCATTTATTTGGGAATTCAGAATCCAGATAAATGCCTGTTTTGTAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057567.3 |
||
| CDS CCA 72 bp | CTCTGGGTACTTGCATGGGAGGATAGTCACGCTGACTaGGGTTACTCTGTGGCTTCGTGGAACTGTCACAAG | + |
|
Preference number: 6 (lower is better) Translates to: LWVLAWEDSHAD*GYSVASWNCHK Trigger: CTTGTGACAGTTCCACGAAGCCACAGAGTAACCCCAGTCAGCGTGACTATCCTCCCATGCAAGTACCCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057567.3 |
||
| CDS TCA 72 bp | GTTACTCTGTGGCTTCGTGGAACTGTCACAAGGGCCTaGTTACGAAAGATCCACACCTGCTGGTCCAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VTLWLRGTVTRA*LRKIHTCWSKS Trigger: TGACTTGGACCAGCAGGTGTGGATCTTTCGTAATCAGGCCCTTGTGACAGTTCCACGAAGCCACAGAGTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057567.3 |
||
| CDS CCA 72 bp | GATAGTCACGCTGACTGGGGTTACTCTGTGGCTTCGTaGAACTGTCACAAGGGCCTGATTACGAAAGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: DSHADWGYSVAS*NCHKGLITKDP Trigger: TGGATCTTTCGTAATCAGGCCCTTGTGACAGTTCCACGAAGCCACAGAGTAACCCCAGTCAGCGTGACTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057567.3 |
||
| CDS CCA 72 bp | ACCTGTCCGGGTGTGGTAAAACAGGAATGGCTTCATTaGCTCAGGGTGGTGGTACAAATCCAAAATCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TCPGVVKQEWLH*LRVVVQIQNLL Trigger: GAGAAGATTTTGGATTTGTACCACCACCCTGAGCCAATGAAGCCATTCCTGTTTTACCACACCCGGACAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057567.3 |
||
| CDS CAA 72 bp | CACCTGTCCGGGTGTGGTAAAACAGGAATGGCTTCATaGGCTCAGGGTGGTGGTACAAATCCAAAATCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: HLSGCGKTGMAS*AQGGGTNPKSS Trigger: AGAAGATTTTGGATTTGTACCACCACCCTGAGCCAATGAAGCCATTCCTGTTTTACCACACCCGGACAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057567.3 |
||
| CDS CAA 90 bp | TGGATGTTCCACCTGTCCGGGTGTGGTAAAACAGGAATGGCTTCATaGGCTCAGGGTGGTGGTACAAATCCAAAATCTTCTCTTCCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: WMFHLSGCGKTGMAS*AQGGGTNPKSSLPL Trigger: TAAAGGAAGAGAAGATTTTGGATTTGTACCACCACCCTGAGCCAATGAAGCCATTCCTGTTTTACCACACCCGGACAGGTGGAACATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057567.3 |
||