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Pregenerated sensors for IL36B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026985

Ensembl transcript IDs: ENSMUST00000028363.2

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp AGCCAGGATAGAGGACTGACTGAAAGACAGAAGTGGAGCCCTCTATaGCATGATAGAACAGAAAGGCTTTTTGTGCTTTTCTCTCTTTGT +
Preference number: 5 (lower is better)
Translates to: SQDRGLTERQKWSPL*HDRTERLFVLFSLC
Trigger: ACAAAGAGAGAAAAGCACAAAAAGCCTTTCTGTTCTATCATGGCATAGAGGGCTCCACTTCTGTCTTTCAGTCAGTCCTCTATCCTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028363.2
CDS GCA 90 bp GCTTTTCTCTCTTTGTACAAATTCATGATGTCTACTTCCTTAAGCTaGAAAGTTGGTTTGCCCTCCATCTCAACACAGCAGAAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: AFLSLYKFMMSTSLS*KVGLPSISTQQKQR
Trigger: TCTCTGCTTCTGCTGTGTTGAGATGGAGGGCAAACCAACTTTGCAGCTTAAGGAAGTAGACATCATGAATTTGTACAAAGAGAGAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028363.2
CDS TCA 90 bp GTTTGCCCTCCATCTCAACACAGCAGAAGCAGAGATTTCTGTTCTTaGTTCCCAGGAAAACTAGATTACCTTTCTTTACATCTTGGAATT +
Preference number: 5 (lower is better)
Translates to: VCPPSQHSRSRDFCS*FPGKLDYLSLHLGI
Trigger: AATTCCAAGATGTAAAGAAAGGTAATCTAGTTTTCCTGGGAATCAAGAACAGAAATCTCTGCTTCTGCTGTGTTGAGATGGAGGGCAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028363.2
CDS CCA 90 bp CTGTTCTTGATTCCCAGGAAAACTAGATTACCTTTCTTTACATCTTaGAATTCCGTGTCTCTACATGCTATCAAGCTAAGAATGACAGGC +
Preference number: 5 (lower is better)
Translates to: LFLIPRKTRLPFFTS*NSVSLHAIKLRMTG
Trigger: GCCTGTCATTCTTAGCTTGATAGCATGTAGAGACACGGAATTCCAAGATGTAAAGAAAGGTAATCTAGTTTTCCTGGGAATCAAGAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028363.2
CDS CCA 72 bp ACCAGCCAGGATAGAGGACTGACTGAAAGACAGAAGTaGAGCCCTCTATGCCATGATAGAACAGAAAGGCTT +
Preference number: 6 (lower is better)
Translates to: TSQDRGLTERQK*SPLCHDRTERL
Trigger: AAGCCTTTCTGTTCTATCATGGCATAGAGGGCTCCACTTCTGTCTTTCAGTCAGTCCTCTATCCTGGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028363.2
CDS GCA 72 bp AGAGGACTGACTGAAAGACAGAAGTGGAGCCCTCTATaGCATGATAGAACAGAAAGGCTTTTTGTGCTTTTC +
Preference number: 6 (lower is better)
Translates to: RGLTERQKWSPL*HDRTERLFVLF
Trigger: GAAAAGCACAAAAAGCCTTTCTGTTCTATCATGGCATAGAGGGCTCCACTTCTGTCTTTCAGTCAGTCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028363.2
CDS CAA 72 bp TTCATGATGTCTACTTCCTTAAGCTGCAAAGTTGGTTaGCCCTCCATCTCAACACAGCAGAAGCAGAGATTT +
Preference number: 6 (lower is better)
Translates to: FMMSTSLSCKVG*PSISTQQKQRF
Trigger: AAATCTCTGCTTCTGCTGTGTTGAGATGGAGGGCAAACCAACTTTGCAGCTTAAGGAAGTAGACATCATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028363.2
CDS CAA 90 bp TGGAATTCCGTGTCTCTACATGCTATCAAGCTAAGAATGACAGGCTaGACATTGTTGCTAGCAGGAACTGCTGTTAAAGTATTTCCAGTC +
Preference number: 6 (lower is better)
Translates to: WNSVSLHAIKLRMTG*TLLLAGTAVKVFPV
Trigger: GACTGGAAATACTTTAACAGCAGTTCCTGCTAGCAACAATGTCAAGCCTGTCATTCTTAGCTTGATAGCATGTAGAGACACGGAATTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028363.2
CDS CCA 72 bp AGTGTTATGATTCGGTTCCCACATTTGAATACTCTTTaGAGGAAGAACATGTACACAAGATTGTGGAGGGAA +
Preference number: 6 (lower is better)
Translates to: SVMIRFPHLNTL*RKNMYTRLWRE
Trigger: TTCCCTCCACAATCTTGTGTACATGTTCTTCCTCCAAAGAGTATTCAAATGTGGGAACCGAATCATAACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028363.2
CDS CAA 72 bp GGATCCATGCATAGTGTTATGATTCGGTTCCCACATTaGAATACTCTTTGGAGGAAGAACATGTACACAAGA +
Preference number: 6 (lower is better)
Translates to: GSMHSVMIRFPH*NTLWRKNMYTR
Trigger: TCTTGTGTACATGTTCTTCCTCCAAAGAGTATTCAAATGTGGGAACCGAATCATAACACTATGCATGGATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028363.2