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Pregenerated sensors for IL36A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026984

Ensembl transcript IDs: ENSMUST00000028361.5

Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TGTTCCCTTCCCCAAGCTGTAGCACAGGCTGCTCCCCATCCTTTGTaGAGAACAGGCAGCTCATCGGCCTTTGCACTCCCATGTACGTGG +
Preference number: 5 (lower is better)
Translates to: CSLPQAVAQAAPHPL*RTGSSSAFALPCTW
Trigger: CCACGTACATGGGAGTGCAAAGGCCGATGAGCTGCCTGTTCTGCACAAAGGATGGGGAGCAGCCTGTGCTACAGCTTGGGGAAGGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028361.5
CDS GCA 90 bp TTGTACATTTCCATTATGTTCCCTTCCCCAAGCTGTAGCACAGGCTaGTCCCCATCCTTTGTGCAGAACAGGCAGCTCATCGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: LYISIMFPSPSCSTG*SPSFVQNRQLIGLC
Trigger: GCAAAGGCCGATGAGCTGCCTGTTCTGCACAAAGGATGGGGAGCAGCCTGTGCTACAGCTTGGGGAAGGGAACATAATGGAAATGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028361.5
CDS CCA 90 bp GAAGTCAGTGATGAAGATTTCCCCCAGTTCTTGGGTCAGAATGAGTaGGCAGCTCCCTTTAGAGCAGACAGCGATGAACCAACCAGGGAA +
Preference number: 5 (lower is better)
Translates to: EVSDEDFPQFLGQNE*AAPFRADSDEPTRE
Trigger: TTCCCTGGTTGGTTCATCGCTGTCTGCTCTAAAGGGAGCTGCCCACTCATTCTGACCCAAGAACTGGGGGAAATCTTCATCACTGACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028361.5
CDS GCA 90 bp GAGCAAGGTAATAGTGACTGGAACTGTTTGCTCTTTCCTTGGGACTaGAGTGAGGATATTGTTCTGCAGGATCCACACACGACTACTAAG +
Preference number: 5 (lower is better)
Translates to: EQGNSDWNCLLFPWD*SEDIVLQDPHTTTK
Trigger: CTTAGTAGTCGTGTGTGGATCCTGCAGAACAATATCCTCACTGCAGTCCCAAGGAAAGAGCAAACAGTTCCAGTCACTATTACCTTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028361.5
CDS CAA 90 bp TTATGTTCCCTTCCCCAAGCTGTAGCACAGGCTGCTCCCCATCCTTaGTGCAGAACAGGCAGCTCATCGGCCTTTGCACTCCCATGTACG +
Preference number: 6 (lower is better)
Translates to: LCSLPQAVAQAAPHP*CRTGSSSAFALPCT
Trigger: CGTACATGGGAGTGCAAAGGCCGATGAGCTGCCTGTTCTGCACAAAGGATGGGGAGCAGCCTGTGCTACAGCTTGGGGAAGGGAACATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028361.5
CDS GCA 72 bp TCCATTATGTTCCCTTCCCCAAGCTGTAGCACAGGCTaGTCCCCATCCTTTGTGCAGAACAGGCAGCTCATC +
Preference number: 6 (lower is better)
Translates to: SIMFPSPSCSTG*SPSFVQNRQLI
Trigger: GATGAGCTGCCTGTTCTGCACAAAGGATGGGGAGCAGCCTGTGCTACAGCTTGGGGAAGGGAACATAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028361.5
CDS CCA 72 bp GATGAAGATTTCCCCCAGTTCTTGGGTCAGAATGAGTaGGCAGCTCCCTTTAGAGCAGACAGCGATGAACCA +
Preference number: 6 (lower is better)
Translates to: DEDFPQFLGQNE*AAPFRADSDEP
Trigger: TGGTTCATCGCTGTCTGCTCTAAAGGGAGCTGCCCACTCATTCTGACCCAAGAACTGGGGGAAATCTTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028361.5
CDS CAA 72 bp CATCTCGAAGTCAGTGATGAAGATTTCCCCCAGTTCTaGGGTCAGAATGAGTGGGCAGCTCCCTTTAGAGCA +
Preference number: 6 (lower is better)
Translates to: HLEVSDEDFPQF*GQNEWAAPFRA
Trigger: TGCTCTAAAGGGAGCTGCCCACTCATTCTGACCCAAGAACTGGGGGAAATCTTCATCACTGACTTCGAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028361.5
CDS CAA 90 bp TACCACAATCATCTCGAAGTCAGTGATGAAGATTTCCCCCAGTTCTaGGGTCAGAATGAGTGGGCAGCTCCCTTTAGAGCAGACAGCGAT +
Preference number: 6 (lower is better)
Translates to: YHNHLEVSDEDFPQF*GQNEWAAPFRADSD
Trigger: ATCGCTGTCTGCTCTAAAGGGAGCTGCCCACTCATTCTGACCCAAGAACTGGGGGAAATCTTCATCACTGACTTCGAGATGATTGTGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028361.5
CDS GCA 72 bp AATAGTGACTGGAACTGTTTGCTCTTTCCTTGGGACTaGAGTGAGGATATTGTTCTGCAGGATCCACACACG +
Preference number: 6 (lower is better)
Translates to: NSDWNCLLFPWD*SEDIVLQDPHT
Trigger: CGTGTGTGGATCCTGCAGAACAATATCCTCACTGCAGTCCCAAGGAAAGAGCAAACAGTTCCAGTCACTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028361.5
CDS GCA 72 bp TGGCATGGGAGCAAGGTAATAGTGACTGGAACTGTTTaGTCTTTCCTTGGGACTGCAGTGAGGATATTGTTC +
Preference number: 6 (lower is better)
Translates to: WHGSKVIVTGTV*SFLGTAVRILF
Trigger: GAACAATATCCTCACTGCAGTCCCAAGGAAAGAGCAAACAGTTCCAGTCACTATTACCTTGCTCCCATGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028361.5