Pregenerated sensors for IL34 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031750Ensembl transcript IDs: ENSMUST00000076846.11, ENSMUST00000150680.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCCAGGGTCAATACATAGATTGCTCAGGGCAACGAGCCATGGCTTaGGCTTGGGGATCCGGGCAGGGAGGTGGGGGTCTGCCGAGACAA | + |
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Preference number: 1 (lower is better) Translates to: TQGQYIDCSGQRAMA*AWGSGQGGGGLPRQ Trigger: TTGTCTCGGCAGACCCCCACCTCCCTGCCCGGATCCCCAAGCTCAAGCCATGGCTCGTTGCCCTGAGCAATCTATGTATTGACCCTGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| 3UTR GCA 90 bp | GAGCCATGGCTTGAGCTTGGGGATCCGGGCAGGGAGGTGGGGGTCTaGCGAGACAAAGGGTACACATTTGTAGCTGTACATTGCATCAAG | + |
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Preference number: 1 (lower is better) Translates to: EPWLELGDPGREVGV*RDKGYTFVAVHCIK Trigger: CTTGATGCAATGTACAGCTACAAATGTGTACCCTTTGTCTCGGCAGACCCCCACCTCCCTGCCCGGATCCCCAAGCTCAAGCCATGGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| 3UTR CCA 90 bp | AAAGGAACCAGAAGAGCATCGTCATGGCAAGATACGGCATTTGGTTaGTCCTCGGCCCAGCACCCCACAGTCAGCACAACTGAAAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: KGTRRASSWQDTAFG*SSAQHPTVSTTEKP Trigger: GGGCTTTTCAGTTGTGCTGACTGTGGGGTGCTGGGCCGAGGACCAACCAAATGCCGTATCTTGCCATGACGATGCTCTTCTGGTTCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| 3UTR CCA 90 bp | TCCAGGAAGGTCTCAGATCCAGGCCAGTTTCTGAAATGCATCCAGTaGCCCGACCCAGGGTCAATACATAGATTGCTCAGGGCAACGAGC | + |
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Preference number: 1 (lower is better) Translates to: SRKVSDPGQFLKCIQ*PDPGSIHRLLRATS Trigger: GCTCGTTGCCCTGAGCAATCTATGTATTGACCCTGGGTCGGGCCACTGGATGCATTTCAGAAACTGGCCTGGATCTGAGACCTTCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| 3UTR GCA 90 bp | TACCCACCATCCAGGAAGGTCTCAGATCCAGGCCAGTTTCTGAAATaGATCCAGTGGCCCGACCCAGGGTCAATACATAGATTGCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: YPPSRKVSDPGQFLK*IQWPDPGSIHRLLR Trigger: CCTGAGCAATCTATGTATTGACCCTGGGTCGGGCCACTGGATGCATTTCAGAAACTGGCCTGGATCTGAGACCTTCCTGGATGGTGGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| 3UTR CCA 90 bp | ATAAATGGCCATTTAATAGAAAAAGGAACCAGAAGAGCATCGTCATaGCAAGATACGGCATTTGGTTGGTCCTCGGCCCAGCACCCCACA | + |
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Preference number: 1 (lower is better) Translates to: INGHLIEKGTRRASS*QDTAFGWSSAQHPT Trigger: TGTGGGGTGCTGGGCCGAGGACCAACCAAATGCCGTATCTTGCCATGACGATGCTCTTCTGGTTCCTTTTTCTATTAAATGGCCATTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGGCACCCCGTCGTTCTTGGCCACCCGCCTGTGGGGCAACAGTGTTTGCAGTCCCCTGAGGCTCCGTaGTACCACCAGAAGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RRHPVVLGHPPVGQQCLQSPEAP*YHQKAG Trigger: TCCTGCCTTCTGGTGGTATCACGGAGCCTCAGGGGA...CTGCAAACACTGTTGCCCCACAGGCGGGTGGCCAAGAACGACGGGGTGCCTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| 3UTR-3UTR CCA 90 bp | CCCGCCTGTGGGGCAACAGTGTTTGCAGATTTCGGACCGGGCCACAAGCAGAGGATCCGGGCAGGGAGGTaGGGGTCTGCCGAGACAAAG | + |
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Preference number: 2 (lower is better) Translates to: PACGATVFADFGPGHKQRIRAGR*GSAETK Trigger: CTTTGTCTCGGCAGACCCCCACCTCCCTGCCCGGAT...CCTCTGCTTGTGGCCCGGTCCGAAATCTGCAAACACTGTTGCCCCACAGGCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| 3UTR CAA 90 bp | AGGCACCCCGTCGTTCTTGGCCACCCGCCTGTGGGGCAACAGTGTTaGCAGATTTCGGACCGGGCCACAAGCAGAGGTGGCTGTAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: RHPVVLGHPPVGQQC*QISDRATSRGGCKG Trigger: TCCCTTACAGCCACCTCTGCTTGTGGCCCGGTCCGAAATCTGCAAACACTGTTGCCCCACAGGCGGGTGGCCAAGAACGACGGGGTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTGTGGAAGAGAAGGCAGGAGGCCTTTCCCTGAAGGCCTTTCCTAAAGGGCCCGGACTGTGGGGATaGAGCCTGGGCAGCTCGCAG | + |
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Preference number: 2 (lower is better) Translates to: LGVEEKAGGLSLKAFPKGPGLWG*SLGSSQ Trigger: CTGCGAGCTGCCCAGGCTCCATCCCCACAGTCCGGG...CCCTTTAGGAAAGGCCTTCAGGGAAAGGCCTCCTGCCTTCTCTTCCACACCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| 3UTR-3UTR CCA 90 bp | TCATGGCAAGATACGGCATTTGGTTGGTCCTCGGCCCAGCACCCCACAGTCAGCAAGGACCCCGGACTGTaGGGATGGAGCCTGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SWQDTAFGWSSAQHPTVSKDPGL*GWSLGS Trigger: GCTGCCCAGGCTCCATCCCCACAGTCCGGGGTCCTT...GCTGACTGTGGGGTGCTGGGCCGAGGACCAACCAAATGCCGTATCTTGCCATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| 3UTR CAA 90 bp | GACCCAGGGTCAATACATAGATTGCTCAGGGCAACGAGCCATGGCTaGAGCTTGGGGATCCGGGCAGGGAGGTGGGGGTCTGCCGAGACA | + |
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Preference number: 2 (lower is better) Translates to: DPGSIHRLLRATSHG*SLGIRAGRWGSAET Trigger: TGTCTCGGCAGACCCCCACCTCCCTGCCCGGATCCCCAAGCTCAAGCCATGGCTCGTTGCCCTGAGCAATCTATGTATTGACCCTGGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGGGGCAACAGTGTTTGCAGATTTCGGACCGGGCCACAAGCAGAGGTGGCCAGGAGGCCTTTCCCTaGAGGCCTTTCCTAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: PVGQQCLQISDRATSRGGQEAFP*RPFLKG Trigger: CCCCTTTAGGAAAGGCCTTCAGGGAAAGGCCTCCTG...GCCACCTCTGCTTGTGGCCCGGTCCGAAATCTGCAAACACTGTTGCCCCACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGAAGAGAAGGCAGGAGGCCTTTCCCTGAAGGCCTTTCCTAAAGGGGCTACCCAACGAGCCATGGCTTaGGCTTGGGGATCCGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: VEEKAGGLSLKAFPKGATQRAMA*AWGSGQ Trigger: CTGCCCGGATCCCCAAGCTCAAGCCATGGCTCGTTG...GGTAGCCCCTTTAGGAAAGGCCTTCAGGGAAAGGCCTCCTGCCTTCTCTTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTGGCCACCCGCCTGTGGGGCAACAGTGTTTGCAGATTTCGGACCGGGCCAATCCAGGCCAGTTTCTaGAATGCATCCAGTGGCCCG | + |
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Preference number: 2 (lower is better) Translates to: FLATRLWGNSVCRFRTGPIQASF*NASSGP Trigger: CGGGCCACTGGATGCATTTCAGAAACTGGCCTGGAT...TGGCCCGGTCCGAAATCTGCAAACACTGTTGCCCCACAGGCGGGTGGCCAAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGCAAGATACGGCATTTGGTTGGTCCTCGGCCCAGCACCCCACAGTCAGCACCAGGAGGCCTTTCCCTaGAGGCCTTTCCTAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: MARYGIWLVLGPAPHSQHQEAFP*RPFLKG Trigger: CCCCTTTAGGAAAGGCCTTCAGGGAAAGGCCTCCTG...GTGCTGACTGTGGGGTGCTGGGCCGAGGACCAACCAAATGCCGTATCTTGCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCCTCCACATCCCTCCCCTGAGGCTCCGTGATACCACCAGAAGGCAGGAAGGTCAATACATAGATTaGTCAGGGCAACGAGCCATG | + |
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Preference number: 2 (lower is better) Translates to: PPLHIPPLRLRDTTRRQEGQYID*SGQRAM Trigger: CATGGCTCGTTGCCCTGAGCAATCTATGTATTGACC...TTCCTGCCTTCTGGTGGTATCACGGAGCCTCAGGGGAGGGATGTGGAGGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGTGGAAGAGAAGGCAGGAGGCCTTTCCCTGAAGGCCTTTCCTAAAGGGGCTGGCAGCTCGCAGTCCTaGCATTTTAAGATGGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: GVEEKAGGLSLKAFPKGAGSSQS*HFKMGL Trigger: AAGCCCCATCTTAAAATGGCAGGACTGCGAGCTGCC...AGCCCCTTTAGGAAAGGCCTTCAGGGAAAGGCCTCCTGCCTTCTCTTCCACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| 3UTR GCA 72 bp | TCGTTCTTGGCCACCCGCCTGTGGGGCAACAGTGTTTaGAGATTTCGGACCGGGCCACAAGCAGAGGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: SFLATRLWGNSV*RFRTGPQAEVA Trigger: AGCCACCTCTGCTTGTGGCCCGGTCCGAAATCTGCAAACACTGTTGCCCCACAGGCGGGTGGCCAAGAACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| 3UTR TCA 72 bp | TTGGTCCTCGGCCCAGCACCCCACAGTCAGCACAACTaGAAAGCCCCAGTAAGTCCTGGGATCCTAGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: LVLGPAPHSQHN*KAPVSPGILGG Trigger: GCCTCCTAGGATCCCAGGACTTACTGGGGCTTTTCAGTTGTGCTGACTGTGGGGTGCTGGGCCGAGGACCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| 3UTR TCA 72 bp | CAATACATAGATTGCTCAGGGCAACGAGCCATGGCTTaGGCTTGGGGATCCGGGCAGGGAGGTGGGGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: QYIDCSGQRAMA*AWGSGQGGGGL Trigger: CAGACCCCCACCTCCCTGCCCGGATCCCCAAGCTCAAGCCATGGCTCGTTGCCCTGAGCAATCTATGTATTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| 3UTR GCA 72 bp | CTTGAGCTTGGGGATCCGGGCAGGGAGGTGGGGGTCTaGCGAGACAAAGGGTACACATTTGTAGCTGTACAT | + |
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Preference number: 3 (lower is better) Translates to: LELGDPGREVGV*RDKGYTFVAVH Trigger: ATGTACAGCTACAAATGTGTACCCTTTGTCTCGGCAGACCCCCACCTCCCTGCCCGGATCCCCAAGCTCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| 3UTR CCA 72 bp | AACCAGAAGAGCATCGTCATGGCAAGATACGGCATTTaGTTGGTCCTCGGCCCAGCACCCCACAGTCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: NQKSIVMARYGI*LVLGPAPHSQH Trigger: GTGCTGACTGTGGGGTGCTGGGCCGAGGACCAACCAAATGCCGTATCTTGCCATGACGATGCTCTTCTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCCACAAGCAGAGGTGGCTGTAAGGGATAGCAACCAGCCCTCCCCTCCACATATTTGTAGCTGTACATaGCATCAAGGACCCCGGACT | + |
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Preference number: 3 (lower is better) Translates to: GPQAEVAVRDSNQPSPPHICSCT*HQGPRT Trigger: AGTCCGGGGTCCTTGATGCAATGTACAGCTACAAAT...ATGTGGAGGGGAGGGCTGGTTGCTATCCCTTACAGCCACCTCTGCTTGTGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| 3UTR CCA 72 bp | AGAAGAGCATCGTCATGGCAAGATACGGCATTTGGTTaGTCCTCGGCCCAGCACCCCACAGTCAGCACAACT | + |
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Preference number: 3 (lower is better) Translates to: RRASSWQDTAFG*SSAQHPTVSTT Trigger: AGTTGTGCTGACTGTGGGGTGCTGGGCCGAGGACCAACCAAATGCCGTATCTTGCCATGACGATGCTCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| 3UTR CCA 72 bp | GTCTCAGATCCAGGCCAGTTTCTGAAATGCATCCAGTaGCCCGACCCAGGGTCAATACATAGATTGCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: VSDPGQFLKCIQ*PDPGSIHRLLR Trigger: CCTGAGCAATCTATGTATTGACCCTGGGTCGGGCCACTGGATGCATTTCAGAAACTGGCCTGGATCTGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| CDS-3UTR CCA 90 bp | CCCGCCTGTGGGGCAACAGTGTTTGCAGATTTCGGACCGGGCCACAAGCAGAGGAAGGACCCCGGACTGTaGGGATGGAGCCTGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PACGATVFADFGPGHKQRKDPGL*GWSLGS Trigger: GCTGCCCAGGCTCCATCCCCACAGTCCGGGGTCCTT...CCTCTGCTTGTGGCCCGGTCCGAAATCTGCAAACACTGTTGCCCCACAGGCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076846.11 |
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| 3UTR CAA 72 bp | CATAGATTGCTCAGGGCAACGAGCCATGGCTTGAGCTaGGGGATCCGGGCAGGGAGGTGGGGGTCTGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: HRLLRATSHGLS*GIRAGRWGSAE Trigger: CTCGGCAGACCCCCACCTCCCTGCCCGGATCCCCAAGCTCAAGCCATGGCTCGTTGCCCTGAGCAATCTATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| CDS-3UTR CCA 90 bp | ACCGGGCCACAAGCAGAGGTGGCTGTAAGGGATAGCAACCAGCCCTCCCCTCCAATCCGGGCAGGGAGGTaGGGGTCTGCCGAGACAAAG | + |
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Preference number: 4 (lower is better) Translates to: TGPQAEVAVRDSNQPSPPIRAGR*GSAETK Trigger: CTTTGTCTCGGCAGACCCCCACCTCCCTGCCCGGAT...TGGAGGGGAGGGCTGGTTGCTATCCCTTACAGCCACCTCTGCTTGTGGCCCGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076846.11 |
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| CDS-3UTR TCA 90 bp | AACGAGCCATGGCTTGAGCTTGGGGATCCGGGCAGGGAGGTGGGGGTCTGCCGACAGACTCAGTGGCATTaGGACTCACCAAGACCCACA | + |
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Preference number: 4 (lower is better) Translates to: NEPWLELGDPGREVGVCRQTQWH*DSPRPT Trigger: TGTGGGTCTTGGTGAGTCTCAATGCCACTGAGTCTG...TCGGCAGACCCCCACCTCCCTGCCCGGATCCCCAAGCTCAAGCCATGGCTCGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| CDS-3UTR TCA 90 bp | CATGGCAAGATACGGCATTTGGTTGGTCCTCGGCCCAGCACCCCACAGTCAGCACAACGAGCCATGGCTTaGGCTTGGGGATCCGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: HGKIRHLVGPRPSTPQSAQRAMA*AWGSGQ Trigger: CTGCCCGGATCCCCAAGCTCAAGCCATGGCTCGTTG...TGCTGACTGTGGGGTGCTGGGCCGAGGACCAACCAAATGCCGTATCTTGCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076846.11 |
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| CDS-3UTR CCA 90 bp | AGGCCTTTCCTAAAGGGGCTACCTACCCACCATCCAGGAAGGTCTCAGATCCAGCCCGGACTGTGGGGATaGAGCCTGGGCAGCTCGCAG | + |
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Preference number: 4 (lower is better) Translates to: RPFLKGLPTHHPGRSQIQPGLWG*SLGSSQ Trigger: CTGCGAGCTGCCCAGGCTCCATCCCCACAGTCCGGG...CTGGATCTGAGACCTTCCTGGATGGTGGGTAGGTAGCCCCTTTAGGAAAGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076846.11 |
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| 3UTR CAA 72 bp | GTAAGTCCTGGGATCCTAGGAGGCACCCCGTCGTTCTaGGCCACCCGCCTGTGGGGCAACAGTGTTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: VSPGILGGTPSF*ATRLWGNSVCR Trigger: TCTGCAAACACTGTTGCCCCACAGGCGGGTGGCCAAGAACGACGGGGTGCCTCCTAGGATCCCAGGACTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS-3UTR TCA 90 bp | AGGAGGCACCCCGTCGTTCTTGGCCACCCGCCTGTGGGGCAACAGTGTTTGCAGAGTACAGCAGTTCCATaGCCCGGAAGCAGTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: RRHPVVLGHPPVGQQCLQSTAVP*PGSSCP Trigger: TGGACAACTGCTTCCGGGTCATGGAACTGCTGTACT...CTGCAAACACTGTTGCCCCACAGGCGGGTGGCCAAGAACGACGGGGTGCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS-3UTR TCA 90 bp | CAGGAAGGTCTCAGATCCAGGCCAGTTTCTGAAATGCATCCAGTGGCCCGACCCGGCCAGGCAGCTGGCTaGGCAGGGTCACAAGTACGT | + |
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Preference number: 4 (lower is better) Translates to: QEGLRSRPVSEMHPVARPGQAAG*AGSQVR Trigger: ACGTACTTGTGACCCTGCTCAGCCAGCTGCCTGGCC...GGGTCGGGCCACTGGATGCATTTCAGAAACTGGCCTGGATCTGAGACCTTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| CDS-3UTR TCA 90 bp | ACCGGGCCACAAGCAGAGGTGGCTGTAAGGGATAGCAACCAGCCCTCCCCTCCACAGACTCAGTGGCATTaGGACTCACCAAGACCCACA | + |
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Preference number: 4 (lower is better) Translates to: TGPQAEVAVRDSNQPSPPQTQWH*DSPRPT Trigger: TGTGGGTCTTGGTGAGTCTCAATGCCACTGAGTCTG...TGGAGGGGAGGGCTGGTTGCTATCCCTTACAGCCACCTCTGCTTGTGGCCCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS-3UTR GCA 90 bp | CCCGCCTGTGGGGCAACAGTGTTTGCAGATTTCGGACCGGGCCACAAGCAGAGGGGCAGCTCGCAGTCCTaGCATTTTAAGATGGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: PACGATVFADFGPGHKQRGSSQS*HFKMGL Trigger: AAGCCCCATCTTAAAATGGCAGGACTGCGAGCTGCC...CCTCTGCTTGTGGCCCGGTCCGAAATCTGCAAACACTGTTGCCCCACAGGCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000076846.11 |
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| CDS-3UTR CCA 90 bp | CCGTCGTTCTTGGCCACCCGCCTGTGGGGCAACAGTGTTTGCAGATTTCGGACCTACTTCCAGGACGGGTaGCCCTCGAGAAGTACATCC | + |
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Preference number: 4 (lower is better) Translates to: PSFLATRLWGNSVCRFRTYFQDG*PSRSTS Trigger: GGATGTACTTCTCGAGGGCCACCCGTCCTGGAAGTA...GGTCCGAAATCTGCAAACACTGTTGCCCCACAGGCGGGTGGCCAAGAACGACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS-3UTR CCA 90 bp | GGTGTGGAAGAGAAGGCAGGAGGCCTTTCCCTGAAGGCCTTTCCTAAAGGGGCTTGTCCAGCAAGGCTTTaGGCCGCACCAGCTTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GVEEKAGGLSLKAFPKGACPARL*AAPASG Trigger: GCCTGAAGCTGGTGCGGCCCAAAGCCTTGCTGGACA...AGCCCCTTTAGGAAAGGCCTTCAGGGAAAGGCCTCCTGCCTTCTCTTCCACACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS-3UTR CCA 90 bp | CTGGGTGTGGAAGAGAAGGCAGGAGGCCTTTCCCTGAAGGCCTTTCCTAAAGGGTGTCCAGCAAGGCTTTaGGCCGCACCAGCTTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LGVEEKAGGLSLKAFPKGCPARL*AAPASG Trigger: GCCTGAAGCTGGTGCGGCCCAAAGCCTTGCTGGACA...CCCTTTAGGAAAGGCCTTCAGGGAAAGGCCTCCTGCCTTCTCTTCCACACCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS-3UTR TCA 90 bp | GGCACCCCGTCGTTCTTGGCCACCCGCCTGTGGGGCAACAGTGTTTGCAGATTTAGTACAGCAGTTCCATaGCCCGGAAGCAGTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GTPSFLATRLWGNSVCRFSTAVP*PGSSCP Trigger: TGGACAACTGCTTCCGGGTCATGGAACTGCTGTACT...AAATCTGCAAACACTGTTGCCCCACAGGCGGGTGGCCAAGAACGACGGGGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS-3UTR CCA 90 bp | CAACAGTGTTTGCAGATTTCGGACCGGGCCACAAGCAGAGGTGGCTGTAAGGGACAGGGCAACGAGCCATaGCTTGAGCTTGGGGATCCG | + |
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Preference number: 4 (lower is better) Translates to: QQCLQISDRATSRGGCKGQGNEP*LELGDP Trigger: CGGATCCCCAAGCTCAAGCCATGGCTCGTTGCCCTG...TCCCTTACAGCCACCTCTGCTTGTGGCCCGGTCCGAAATCTGCAAACACTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076846.11 |
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| CDS-3UTR CCA 90 bp | AAGATACGGCATTTGGTTGGTCCTCGGCCCAGCACCCCACAGTCAGCACAACTGTGGTGTCAAATGATCTaGCCCATGGGCTGGGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: KIRHLVGPRPSTPQSAQLWCQMI*PMGWGG Trigger: GCCTCCCCAGCCCATGGGCCAGATCATTTGACACCA...CAGTTGTGCTGACTGTGGGGTGCTGGGCCGAGGACCAACCAAATGCCGTATCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| CDS-3UTR CCA 90 bp | CTTGGGGATCCGGGCAGGGAGGTGGGGGTCTGCCGAGACAAAGGGTACACATTTTCAGAAGCTCCCAGCTaGTGTCAAATGATCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LGDPGREVGVCRDKGYTFSEAPS*CQMIWP Trigger: GGGCCAGATCATTTGACACCAGCTGGGAGCTTCTGA...AAATGTGTACCCTTTGTCTCGGCAGACCCCCACCTCCCTGCCCGGATCCCCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| 3UTR CAA 72 bp | CAGAAGAGCATCGTCATGGCAAGATACGGCATTTGGTaGGTCCTCGGCCCAGCACCCCACAGTCAGCACAAC | + |
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Preference number: 4 (lower is better) Translates to: QKSIVMARYGIW*VLGPAPHSQHN Trigger: GTTGTGCTGACTGTGGGGTGCTGGGCCGAGGACCAACCAAATGCCGTATCTTGCCATGACGATGCTCTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| 3UTR CAA 72 bp | GAACCAGAAGAGCATCGTCATGGCAAGATACGGCATTaGGTTGGTCCTCGGCCCAGCACCCCACAGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: EPEEHRHGKIRH*VGPRPSTPQSA Trigger: TGCTGACTGTGGGGTGCTGGGCCGAGGACCAACCAAATGCCGTATCTTGCCATGACGATGCTCTTCTGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS-3UTR TCA 90 bp | AGGCCTTTCCTAAAGGGGCTACCTACCCACCATCCAGGAAGGTCTCAGATCCAGAACACAGCTTCCACGTaGGGGCCAATCTCCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: RPFLKGLPTHHPGRSQIQNTAST*GPISTS Trigger: GGATGTGGAGATTGGCCCTCACGTGGAAGCTGTGTT...CTGGATCTGAGACCTTCCTGGATGGTGGGTAGGTAGCCCCTTTAGGAAAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS-3UTR TCA 90 bp | CCTCCCCTCCACATCCCTCCCCTGAGGCTCCGTGATACCACCAGAAGGCAGGAACAGCAATCCTGTAGTTaGTGGGGAAGTAATGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPLHIPPLRLRDTTRRQEQQSCS*WGSNVS Trigger: TGAAACATTACTTCCCCATCAACTACAGGATTGCTG...TTCCTGCCTTCTGGTGGTATCACGGAGCCTCAGGGGAGGGATGTGGAGGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS-3UTR CCA 90 bp | ATCCAGGAAGGTCTCAGATCCAGGCCAGTTTCTGAAATGCATCCAGTGGCCCGATACTTCCAGGACGGGTaGCCCTCGAGAAGTACATCC | + |
|
Preference number: 4 (lower is better) Translates to: IQEGLRSRPVSEMHPVARYFQDG*PSRSTS Trigger: GGATGTACTTCTCGAGGGCCACCCGTCCTGGAAGTA...TCGGGCCACTGGATGCATTTCAGAAACTGGCCTGGATCTGAGACCTTCCTGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| 3UTR CAA 72 bp | CTGCCGAGACAAAGGGTACACATTTGTAGCTGTACATaGCATCAAGGACCCCGGACTGTGGGGATGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPRQRVHICSCT*HQGPRTVGMEP Trigger: AGGCTCCATCCCCACAGTCCGGGGTCCTTGATGCAATGTACAGCTACAAATGTGTACCCTTTGTCTCGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| CDS-3UTR TCA 90 bp | ACCTACCCACCATCCAGGAAGGTCTCAGATCCAGGCCAGTTTCTGAAATGCATCAACACAGCTTCCACGTaGGGGCCAATCTCCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: TYPPSRKVSDPGQFLKCINTAST*GPISTS Trigger: GGATGTGGAGATTGGCCCTCACGTGGAAGCTGTGTT...GATGCATTTCAGAAACTGGCCTGGATCTGAGACCTTCCTGGATGGTGGGTAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS-3UTR CCA 90 bp | GGCAACAGTGTTTGCAGATTTCGGACCGGGCCACAAGCAGAGGTGGCTGTAAGGCCTGCCATTTTAAGATaGGGCTTTGTTTACAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GNSVCRFRTGPQAEVAVRPAILR*GFVYSK Trigger: CTTGCTGTAAACAAAGCCCCATCTTAAAATGGCAGG...CCTTACAGCCACCTCTGCTTGTGGCCCGGTCCGAAATCTGCAAACACTGTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076846.11 |
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| CDS-3UTR TCA 90 bp | ACCTACCCACCATCCAGGAAGGTCTCAGATCCAGGCCAGTTTCTGAAATGCATCTTCTCCAGCAATGTCTaGACCTCCTGTAGATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TYPPSRKVSDPGQFLKCIFSSNV*TSCRYF Trigger: GAAGTATCTACAGGAGGTTCAGACATTGCTGGAGAA...GATGCATTTCAGAAACTGGCCTGGATCTGAGACCTTCCTGGATGGTGGGTAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS-3UTR TCA 90 bp | TACCTACCCACCATCCAGGAAGGTCTCAGATCCAGGCCAGTTTCTGAAATGCATCAGCAATCCTGTAGTTaGTGGGGAAGTAATGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLPTIQEGLRSRPVSEMHQQSCS*WGSNVS Trigger: TGAAACATTACTTCCCCATCAACTACAGGATTGCTG...ATGCATTTCAGAAACTGGCCTGGATCTGAGACCTTCCTGGATGGTGGGTAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS-3UTR CAA 90 bp | GCATCAAGGACCCCGGACTGTGGGGATGGAGCCTGGGCAGCTCGCAGTCCTGCCATGACCCGGAAGCAGTaGTCCAGCAAGGCTTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ASRTPDCGDGAWAARSPAMTRKQ*SSKALG Trigger: GCCCAAAGCCTTGCTGGACAACTGCTTCCGGGTCAT...GGCAGGACTGCGAGCTGCCCAGGCTCCATCCCCACAGTCCGGGGTCCTTGATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| CDS-3UTR CAA 90 bp | TGCATCAAGGACCCCGGACTGTGGGGATGGAGCCTGGGCAGCTCGCAGTCCTGCTGCAGCCTTGTGATGTaGGCCACTCTGAGTACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: CIKDPGLWGWSLGSSQSCCSLVM*ATLSTP Trigger: GGGGGTACTCAGAGTGGCCAACATCACAAGGCTGCA...GCAGGACTGCGAGCTGCCCAGGCTCCATCCCCACAGTCCGGGGTCCTTGATGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| CDS TCA 90 bp | TGTCAAATGATCTGGCCCATGGGCTGGGGAGGCCAGGCAGCTGGCTaGGCAGGGTCACAAGTACGTGTCCCGGCAGGTGTACACCAACGG | + |
|
Preference number: 5 (lower is better) Translates to: CQMIWPMGWGGQAAG*AGSQVRVPAGVHQR Trigger: CCGTTGGTGTACACCTGCCGGGACACGTACTTGTGACCCTGCTCAGCCAGCTGCCTGGCCTCCCCAGCCCATGGGCCAGATCATTTGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| CDS CCA 90 bp | CTGGTGTCAAATGATCTGGCCCATGGGCTGGGGAGGCCAGGCAGCTaGCTGAGCAGGGTCACAAGTACGTGTCCCGGCAGGTGTACACCA | + |
|
Preference number: 5 (lower is better) Translates to: LVSNDLAHGLGRPGS*LSRVTSTCPGRCTP Trigger: TGGTGTACACCTGCCGGGACACGTACTTGTGACCCTGCTCAGCCAGCTGCCTGGCCTCCCCAGCCCATGGGCCAGATCATTTGACACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| CDS-3UTR CAA 90 bp | CCCGCCTGTGGGGCAACAGTGTTTGCAGATTTCGGACCGGGCCACAAGCAGAGGTGCAGCCTTGTGATGTaGGCCACTCTGAGTACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PACGATVFADFGPGHKQRCSLVM*ATLSTP Trigger: GGGGGTACTCAGAGTGGCCAACATCACAAGGCTGCA...CCTCTGCTTGTGGCCCGGTCCGAAATCTGCAAACACTGTTGCCCCACAGGCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS-3UTR CAA 90 bp | TCATGGCAAGATACGGCATTTGGTTGGTCCTCGGCCCAGCACCCCACAGTCAGCATGACCCGGAAGCAGTaGTCCAGCAAGGCTTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SWQDTAFGWSSAQHPTVSMTRKQ*SSKALG Trigger: GCCCAAAGCCTTGCTGGACAACTGCTTCCGGGTCAT...GCTGACTGTGGGGTGCTGGGCCGAGGACCAACCAAATGCCGTATCTTGCCATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS TCA 90 bp | AGACTCACCAAGACCCACAGGTACCGAAGCTCTCGCTCACTCACGTaGGCCTTCTGCAGCCTTGTGATGTTGGCCACTCTGAGTACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLTKTHRYRSSRSLT*AFCSLVMLATLSTP Trigger: GGGGGTACTCAGAGTGGCCAACATCACAAGGCTGCAGAAGGCTCACGTGAGTGAGCGAGAGCTTCGGTACCTGTGGGTCTTGGTGAGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS CCA 90 bp | GTGAGGGCCAATCTCCACATCCTTTCATCATCAGAAGCTCCCAGCTaGTGTCAAATGATCTGGCCCATGGGCTGGGGAGGCCAGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VRANLHILSSSEAPS*CQMIWPMGWGGQAA Trigger: AGCTGCCTGGCCTCCCCAGCCCATGGGCCAGATCATTTGACACCAGCTGGGAGCTTCTGATGATGAAAGGATGTGGAGATTGGCCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| CDS TCA 90 bp | ACACCAACGGCCATGAGGCTCCGCTGTACGTTCTCCAGCAATGTCTaGACCTCCTGTAGATACTTCCAGGACGGGTGGCCCTCGAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TPTAMRLRCTFSSNV*TSCRYFQDGWPSRS Trigger: ACTTCTCGAGGGCCACCCGTCCTGGAAGTATCTACAGGAGGTTCAGACATTGCTGGAGAACGTACAGCGGAGCCTCATGGCCGTTGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| CDS-3UTR CAA 90 bp | GGCCAGTTTCTGAAATGCATCCAGTGGCCCGACCCAGGGTCAATACATAGATTGTTGTCCAGCAAGGCTTaGGGCCGCACCAGCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GQFLKCIQWPDPGSIHRLLSSKA*GRTSFR Trigger: CCTGAAGCTGGTGCGGCCCAAAGCCTTGCTGGACAA...CAATCTATGTATTGACCCTGGGTCGGGCCACTGGATGCATTTCAGAAACTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS TCA 90 bp | ATCTCCACATCCATGAGGCTCCGCTGTACGTTCTCCAGCAATGTCTaGACCTCCTGTAGATACTTCCAGGACGGGTGGCCCTCGAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ISTSMRLRCTFSSNV*TSCRYFQDGWPSRS Trigger: ACTTCTCGAGGGCCACCCGTCCTGGAAGTATCTACAGGAGGTTCAGACATTGCTGGAGAACGTACAGCGGAGCCTCATGGATGTGGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076846.11 |
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| CDS TCA 90 bp | AGGCTTAGGCCTGGAGTACTCAGAAGAGATAACACAGCTTCCACGTaGGGGCCAATCTCCACATCCATGAGGCTCCGCTGTACGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLRPGVLRRDNTAST*GPISTSMRLRCTFS Trigger: GGAGAACGTACAGCGGAGCCTCATGGATGTGGAGATTGGCCCTCACGTGGAAGCTGTGTTATCTCTTCTGAGTACTCCAGGCCTAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076846.11 |
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| CDS-3UTR CAA 90 bp | AAGATACGGCATTTGGTTGGTCCTCGGCCCAGCACCCCACAGTCAGCACAACTGGTCACACTCCTTATCTaGGGTCAGAGTCCATATCTC | + |
|
Preference number: 5 (lower is better) Translates to: KIRHLVGPRPSTPQSAQLVTLLI*GQSPYL Trigger: GAGATATGGACTCTGACCCAAGATAAGGAGTGTGAC...CAGTTGTGCTGACTGTGGGGTGCTGGGCCGAGGACCAACCAAATGCCGTATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS-3UTR CAA 90 bp | GGTGTGGAAGAGAAGGCAGGAGGCCTTTCCCTGAAGGCCTTTCCTAAAGGGGCTATTTGTAGCTGTACATaGCATCAAGGACCCCGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GVEEKAGGLSLKAFPKGAICSCT*HQGPRT Trigger: AGTCCGGGGTCCTTGATGCAATGTACAGCTACAAAT...AGCCCCTTTAGGAAAGGCCTTCAGGGAAAGGCCTCCTGCCTTCTCTTCCACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076846.11 |
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| CDS TCA 90 bp | AGGCTTAGGCCTGGAGTACTCAGAAGAGATAACACAGCTTCCACGTaGGGGCCAATCTCCACATCCTTTCATCATCAGAAGCTCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RLRPGVLRRDNTAST*GPISTSFHHQKLPA Trigger: AGCTGGGAGCTTCTGATGATGAAAGGATGTGGAGATTGGCCCTCACGTGGAAGCTGTGTTATCTCTTCTGAGTACTCCAGGCCTAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| CDS-3UTR CAA 90 bp | ACCTACCCACCATCCAGGAAGGTCTCAGATCCAGGCCAGTTTCTGAAATGCATCGTCACACTCCTTATCTaGGGTCAGAGTCCATATCTC | + |
|
Preference number: 5 (lower is better) Translates to: TYPPSRKVSDPGQFLKCIVTLLI*GQSPYL Trigger: GAGATATGGACTCTGACCCAAGATAAGGAGTGTGAC...GATGCATTTCAGAAACTGGCCTGGATCTGAGACCTTCCTGGATGGTGGGTAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS CCA 72 bp | AATGATCTGGCCCATGGGCTGGGGAGGCCAGGCAGCTaGCTGAGCAGGGTCACAAGTACGTGTCCCGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: NDLAHGLGRPGS*LSRVTSTCPGR Trigger: CCTGCCGGGACACGTACTTGTGACCCTGCTCAGCCAGCTGCCTGGCCTCCCCAGCCCATGGGCCAGATCATT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| CDS TCA 72 bp | GCCATGAGGCTCCGCTGTACGTTCTCCAGCAATGTCTaGACCTCCTGTAGATACTTCCAGGACGGGTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: AMRLRCTFSSNV*TSCRYFQDGWP Trigger: GGGCCACCCGTCCTGGAAGTATCTACAGGAGGTTCAGACATTGCTGGAGAACGTACAGCGGAGCCTCATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| CDS CAA 90 bp | GACGGGTGGCCCTCGAGAAGTACATCCATCACAGACTCAGTGGCATaGAGACTCACCAAGACCCACAGGTACCGAAGCTCTCGCTCACTC | + |
|
Preference number: 6 (lower is better) Translates to: DGWPSRSTSITDSVA*RLTKTHRYRSSRSL Trigger: GAGTGAGCGAGAGCTTCGGTACCTGTGGGTCTTGGTGAGTCTCAATGCCACTGAGTCTGTGATGGATGTACTTCTCGAGGGCCACCCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS CAA 90 bp | CAGTACAGCAGTTCCATGACCCGGAAGCAGTTGTCCAGCAAGGCTTaGGGCCGCACCAGCTTCAGGCTTAGGCCTGGAGTACTCAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: QYSSSMTRKQLSSKA*GRTSFRLRPGVLRR Trigger: TCTTCTGAGTACTCCAGGCCTAAGCCTGAAGCTGGTGCGGCCCAAAGCCTTGCTGGACAACTGCTTCCGGGTCATGGAACTGCTGTACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS TCA 72 bp | AAGACCCACAGGTACCGAAGCTCTCGCTCACTCACGTaGGCCTTCTGCAGCCTTGTGATGTTGGCCACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: KTHRYRSSRSLT*AFCSLVMLATL Trigger: CAGAGTGGCCAACATCACAAGGCTGCAGAAGGCTCACGTGAGTGAGCGAGAGCTTCGGTACCTGTGGGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS TCA 72 bp | TCCATGAGGCTCCGCTGTACGTTCTCCAGCAATGTCTaGACCTCCTGTAGATACTTCCAGGACGGGTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SMRLRCTFSSNV*TSCRYFQDGWP Trigger: GGGCCACCCGTCCTGGAAGTATCTACAGGAGGTTCAGACATTGCTGGAGAACGTACAGCGGAGCCTCATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076846.11 |
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| CDS CAA 72 bp | CAAGAACAGTACAGCAGTTCCATGACCCGGAAGCAGTaGTCCAGCAAGGCTTTGGGCCGCACCAGCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QEQYSSSMTRKQ*SSKALGRTSFR Trigger: CCTGAAGCTGGTGCGGCCCAAAGCCTTGCTGGACAACTGCTTCCGGGTCATGGAACTGCTGTACTGTTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS CAA 90 bp | TGTTTACAGCAAGAACAGTACAGCAGTTCCATGACCCGGAAGCAGTaGTCCAGCAAGGCTTTGGGCCGCACCAGCTTCAGGCTTAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CLQQEQYSSSMTRKQ*SSKALGRTSFRLRP Trigger: AGGCCTAAGCCTGAAGCTGGTGCGGCCCAAAGCCTTGCTGGACAACTGCTTCCGGGTCATGGAACTGCTGTACTGTTCTTGCTGTAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076846.11 |
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| CDS TCA 72 bp | ACACAGCTTCCACGTGAGGGCCAATCTCCACATCCATaGGGCTCCGCTGTACGTTCTCCAGCAATGTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: TQLPREGQSPHP*GSAVRSPAMSE Trigger: TTCAGACATTGCTGGAGAACGTACAGCGGAGCCTCATGGATGTGGAGATTGGCCCTCACGTGGAAGCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076846.11 |
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| CDS TCA 72 bp | CCTGGAGTACTCAGAAGAGATAACACAGCTTCCACGTaGGGGCCAATCTCCACATCCATGAGGCTCCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PGVLRRDNTAST*GPISTSMRLRC Trigger: ACAGCGGAGCCTCATGGATGTGGAGATTGGCCCTCACGTGGAAGCTGTGTTATCTCTTCTGAGTACTCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076846.11 |
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| CDS CCA 72 bp | AATCTCCACATCCTTTCATCATCAGAAGCTCCCAGCTaGTGTCAAATGATCTGGCCCATGGGCTGGGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: NLHILSSSEAPS*CQMIWPMGWGG Trigger: GCCTCCCCAGCCCATGGGCCAGATCATTTGACACCAGCTGGGAGCTTCTGATGATGAAAGGATGTGGAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150680.2 |
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| CDS TCA 72 bp | GGCTTTGTTTACAGCAAGAACAGTACAGCAGTTCCATaGCCCGGAAGCAGTTGTCCAGCAAGGCTTTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GFVYSKNSTAVP*PGSSCPARLWA Trigger: GGCCCAAAGCCTTGCTGGACAACTGCTTCCGGGTCATGGAACTGCTGTACTGTTCTTGCTGTAAACAAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076846.11 |
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| CDS CAA 72 bp | CCCTCGAGAAGTACATCCATCACAGACTCAGTGGCATaGAGACTCACCAAGACCCACAGGTACCGAAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSRSTSITDSVA*RLTKTHRYRSS Trigger: AGAGCTTCGGTACCTGTGGGTCTTGGTGAGTCTCAATGCCACTGAGTCTGTGATGGATGTACTTCTCGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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| CDS CCA 72 bp | GGAGCCTGGGCAGCTCGCAGTCCTGCCATTTTAAGATaGGGCTTTGTTTACAGCAAGAACAGTACAGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GAWAARSPAILR*GFVYSKNSTAV Trigger: AACTGCTGTACTGTTCTTGCTGTAAACAAAGCCCCATCTTAAAATGGCAGGACTGCGAGCTGCCCAGGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076846.11 |
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| CDS CAA 72 bp | GCCCCGAAGGTAGCCTGTAAGGTCACACTCCTTATCTaGGGTCAGAGTCCATATCTCCAAATTCTCGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: APKVACKVTLLI*GQSPYLQILVS Trigger: GGAAACGAGAATTTGGAGATATGGACTCTGACCCAAGATAAGGAGTGTGACCTTACAGGCTACCTTCGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076846.11 ENSMUST00000150680.2 |
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