Pregenerated sensors for IL33 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024810Ensembl transcript IDs: ENSMUST00000025724.9, ENSMUST00000120388.9, ENSMUST00000136850.2, ENSMUST00000144528.8, ENSMUST00000177518.8
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAAGGGCTGATCTGAGGGTTGCCTGGGGCATCTGCGGAGGCATTTaGCATTTTATTATAAGTGAGAAACAGTCAGTCTTTGCAGCAGCT | + |
|
Preference number: 1 (lower is better) Translates to: ERADLRVAWGICGGI*HFIISEKQSVFAAA Trigger: AGCTGCTGCAAAGACTGACTGTTTCTCACTTATAATAAAATGCCAAATGCCTCCGCAGATGCCCCAGGCAACCCTCAGATCAGCCCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR CCA 90 bp | CAGGTAACGCCACTCTTCACAGAAAGGGCTGATCTGAGGGTTGCCTaGGGCATCTGCGGAGGCATTTGGCATTTTATTATAAGTGAGAAA | + |
|
Preference number: 1 (lower is better) Translates to: QVTPLFTERADLRVA*GICGGIWHFIISEK Trigger: TTTCTCACTTATAATAAAATGCCAAATGCCTCCGCAGATGCCCCAGGCAACCCTCAGATCAGCCCTTTCTGTGAAGAGTGGCGTTACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR-3UTR GCA 90 bp | GCTGATCTGAGGGTTGCCTGGGGCATCTGCGGAGGCATTTGGCATTTTATTATAGAAACAGTCAGTCTTTaGAGCAGCTGGTCCTCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: ADLRVAWGICGGIWHFIIETVSL*SSWSSP Trigger: GGGGGAGGACCAGCTGCTGCAAAGACTGACTGTTTC...TATAATAAAATGCCAAATGCCTCCGCAGATGCCCCAGGCAACCCTCAGATCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR-3UTR TCA 90 bp | CACCATGAGATCCCATTCTATTGGCATGTCCTAGTGTATATCCTGATCAGTTCTCAGAAAGGGCTGATCTaGGGGTTGCCTGGGGCATCT | + |
|
Preference number: 2 (lower is better) Translates to: HHEIPFYWHVLVYILISSQKGLI*GLPGAS Trigger: AGATGCCCCAGGCAACCCTCAGATCAGCCCTTTCTG...AGAACTGATCAGGATATACACTAGGACATGCCAATAGAATGGGATCTCATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR-3UTR CCA 90 bp | AATTGGAAGTTTAAGAAGGAAACAAGCACAGGTAACGCCACTCTTCACAGAAAGGATCTGAGGGTTGCCTaGGGCATCTGCGGAGGCATT | + |
|
Preference number: 2 (lower is better) Translates to: NWKFKKETSTGNATLHRKDLRVA*GICGGI Trigger: AATGCCTCCGCAGATGCCCCAGGCAACCCTCAGATC...CTTTCTGTGAAGAGTGGCGTTACCTGTGCTTGTTTCCTTCTTAAACTTCCAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR-3UTR GCA 90 bp | ATTGGAAGTTTAAGAAGGAAACAAGCACAGGTAACGCCACTCTTCACAGAAAGGGTTGCCTGGGGCATCTaGGGAGGCATTTGGCATTTT | + |
|
Preference number: 2 (lower is better) Translates to: IGSLRRKQAQVTPLFTERVAWGI*GGIWHF Trigger: AAAATGCCAAATGCCTCCGCAGATGCCCCAGGCAAC...CCTTTCTGTGAAGAGTGGCGTTACCTGTGCTTGTTTCCTTCTTAAACTTCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR-3UTR GCA 90 bp | GACTGTGACAAATTAATGAAACAATTATACCTGTTACAGCCGTACGATCCTACATTCCACCGTGAGCATTaGTGCTGTGAAGCTGAACAG | + |
|
Preference number: 2 (lower is better) Translates to: DCDKLMKQLYLLQPYDPTFHREH*CCEAEQ Trigger: CTGTTCAGCTTCACAGCAGCAATGCTCACGGTGGAA...TGTAGGATCGTACGGCTGTAACAGGTATAATTGTTTCATTAATTTGTCACAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGAAGTTTAAGAAGGAAACAAGCACAGGTAACGCCACTCTTCACAGAAAGGGCATCGTAAGCCAAGAATaGCTTTCTTTCTCTCTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: WKFKKETSTGNATLHRKGIVSQE*LSFSLL Trigger: TAACAGAGAGAAAGAAAGCCATTCTTGGCTTACGAT...GCCCTTTCTGTGAAGAGTGGCGTTACCTGTGCTTGTTTCCTTCTTAAACTTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR-3UTR CCA 90 bp | AATTGGAAGTTTAAGAAGGAAACAAGCACAGGTAACGCCACTCTTCACAGAAAGATCGTAAGCCAAGAATaGCTTTCTTTCTCTCTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: NWKFKKETSTGNATLHRKIVSQE*LSFSLL Trigger: TAACAGAGAGAAAGAAAGCCATTCTTGGCTTACGAT...CTTTCTGTGAAGAGTGGCGTTACCTGTGCTTGTTTCCTTCTTAAACTTCCAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR-3UTR CCA 90 bp | GACTGTGACAAATTAATGAAACAATTATACCTGTTACAGCCGTACGATCCTACAAAAGTCATAGCTCCTTaGAAATCAGCGAGAAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: DCDKLMKQLYLLQPYDPTKVIAP*KSARRM Trigger: CATCCTTCTCGCTGATTTCCAAGGAGCTATGACTTT...TGTAGGATCGTACGGCTGTAACAGGTATAATTGTTTCATTAATTTGTCACAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR-3UTR CCA 90 bp | GACTGTGACAAATTAATGAAACAATTATACCTGTTACAGCCGTACGATCCTACAATCTGCGGAGGCATTTaGCATTTTATTATAAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: DCDKLMKQLYLLQPYDPTICGGI*HFIISE Trigger: CTCACTTATAATAAAATGCCAAATGCCTCCGCAGAT...TGTAGGATCGTACGGCTGTAACAGGTATAATTGTTTCATTAATTTGTCACAGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR TCA 72 bp | ACAAGCACAGGTAACGCCACTCTTCACAGAAAGGGCTaGTCTGAGGGTTGCCTGGGGCATCTGCGGAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: TSTGNATLHRKG*SEGCLGHLRRH Trigger: ATGCCTCCGCAGATGCCCCAGGCAACCCTCAGATCAGCCCTTTCTGTGAAGAGTGGCGTTACCTGTGCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTGATCTGAGGGTTGCCTGGGGCATCTGCGGAGGCATTTGGCATTTTATTATAAGAAACAGTCAGTCTTaGCAGCAGCTGGTCCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: ADLRVAWGICGGIWHFIIRNSQS*QQLVLP Trigger: GGGGAGGACCAGCTGCTGCAAAGACTGACTGTTTCT...TATAATAAAATGCCAAATGCCTCCGCAGATGCCCCAGGCAACCCTCAGATCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR GCA 72 bp | CGTGAGCATTGCTGCTGTGAAGCTGAACAGAACGTGTaGATAAGGAAAGCAAGCAGCCGAGACATCTCATCC | + |
|
Preference number: 3 (lower is better) Translates to: REHCCCEAEQNV*IRKASSRDISS Trigger: GGATGAGATGTCTCGGCTGCTTGCTTTCCTTATGCACACGTTCTGTTCAGCTTCACAGCAGCAATGCTCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR CCA 72 bp | CCACTCTTCACAGAAAGGGCTGATCTGAGGGTTGCCTaGGGCATCTGCGGAGGCATTTGGCATTTTATTATA | + |
|
Preference number: 3 (lower is better) Translates to: PLFTERADLRVA*GICGGIWHFII Trigger: TATAATAAAATGCCAAATGCCTCCGCAGATGCCCCAGGCAACCCTCAGATCAGCCCTTTCTGTGAAGAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR CCA 72 bp | AAGAAAGCTGAGGGAGTAGGAGAGCCGTTACGGATATaGTGGTCAAAAGAACCAAAGAAGGGGCAGAAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: KKAEGVGEPLRI*WSKEPKKGQKL Trigger: TAGCTTCTGCCCCTTCTTTGGTTCTTTTGACCACCATATCCGTAACGGCTCTCCTACTCCCTCAGCTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR-3UTR CAA 90 bp | CACCATGAGATCCCATTCTATTGGCATGTCCTAGTGTATATCCTGATCAGTTCTAGAAACAGTCAGTCTTaGCAGCAGCTGGTCCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: HHEIPFYWHVLVYILISSRNSQS*QQLVLP Trigger: GGGGAGGACCAGCTGCTGCAAAGACTGACTGTTTCT...AGAACTGATCAGGATATACACTAGGACATGCCAATAGAATGGGATCTCATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR GCA 72 bp | ACAGAAAGGGCTGATCTGAGGGTTGCCTGGGGCATCTaGGGAGGCATTTGGCATTTTATTATAAGTGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TERADLRVAWGI*GGIWHFIISEK Trigger: TTTCTCACTTATAATAAAATGCCAAATGCCTCCGCAGATGCCCCAGGCAACCCTCAGATCAGCCCTTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR CCA 72 bp | TCCAAGCAGATGCATGCATCCAAAGTCATAGCTCCTTaGAAATCAGCGAGAAGGATGATGTTAGCGTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SKQMHASKVIAP*KSARRMMLASL Trigger: GAGAGACGCTAACATCATCCTTCTCGCTGATTTCCAAGGAGCTATGACTTTGGATGCATGCATCTGCTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCGAGACATCTCATCCAAGCAGATGCATGCATCCAAAGTCATAGCTCCTTGTTACCCTTTCTTCAGTaGGAAGCATTAAGTCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: QPRHLIQADACIQSHSSLLPFLQ*EALSHS Trigger: TGAATGACTTAATGCTTCCAACTGAAGAAAGGGTAA...CAAGGAGCTATGACTTTGGATGCATGCATCTGCTTGGATGAGATGTCTCGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR-3UTR CAA 90 bp | GACTGTGACAAATTAATGAAACAATTATACCTGTTACAGCCGTACGATCCTACAAGTGGAATAAGTGTGTaGGCATATAGACGTCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: DCDKLMKQLYLLQPYDPTSGISV*AYRRQS Trigger: GCTCTGACGTCTATATGCCAACACACTTATTCCACT...TGTAGGATCGTACGGCTGTAACAGGTATAATTGTTTCATTAATTTGTCACAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGGCATTTTATTATAAGTGAGAAACAGTCAGTCTTTGCAGCAGCTGGTCCTTTACCCTTTCTTCAGTaGGAAGCATTAAGTCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: IWHFIISEKQSVFAAAGPLPFLQ*EALSHS Trigger: TGAATGACTTAATGCTTCCAACTGAAGAAAGGGTAA...AGGACCAGCTGCTGCAAAGACTGACTGTTTCTCACTTATAATAAAATGCCAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR TCA 72 bp | CAGATTCCGCCTTTACATTCCTCTACAGTAAGACTGTaGCAAATTAATGAAACAATTATACCTGTTACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: QIPPLHSSTVRL*QINETIIPVTA Trigger: GGCTGTAACAGGTATAATTGTTTCATTAATTTGTCACAGTCTTACTGTAGAGGAATGTAAAGGCGGAATCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR CCA 72 bp | AGCTTGTTAGATATAGTCAATGATTTCAATCACGGGTaGGAACTAAAATGTCTTTCACTTCCTAATGTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLLDIVNDFNHG*ELKCLSLPNVS Trigger: GCTTACATTAGGAAGTGAAAGACATTTTAGTTCCCACCCGTGATTGAAATCATTGACTATATCTAACAAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR TCA 90 bp | GCTGATCTGAGGGTTGCCTGGGGCATCTGCGGAGGCATTTGGCATTTTATTATACGCCTGCGGTGCTGCTaGACTTTGCCGGGGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: ADLRVAWGICGGIWHFIIRLRCC*TLPGKS Trigger: AGATTTCCCCGGCAAAGTTCAGCAGCACCGCAGGCG...TATAATAAAATGCCAAATGCCTCCGCAGATGCCCCAGGCAACCCTCAGATCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR TCA 90 bp | CATAAGGAAAGCAAGCAGCCGAGACATCTCATCCAAGCAGATGCATGCATCCAAACACCGTCGCCTGATTaGCTTGCAGGACAGGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HKESKQPRHLIQADACIQTPSPD*LAGQGD Trigger: GTCTCCCTGTCCTGCAAGTCAATCAGGCGACGGTGT...TTGGATGCATGCATCTGCTTGGATGAGATGTCTCGGCTGCTTGCTTTCCTTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CCA 90 bp | TGCACTGTGGTGCCTGCTCTTCTGAAGTCCGTGAGTGTGATTTCATACAGGACTCTTCCTAGAATCCCGTaGATAGGCAGAGAAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CTVVPALLKSVSVISYRTLPRIP*IGREVL Trigger: GAGAACTTCTCTGCCTATCCACGGGATTCTAGGAAG...AGTCCTGTATGAAATCACACTCACGGACTTCAGAAGAGCAGGCACCACAGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAGTTTAAGAAGGAAACAAGCACAGGTAACGCCACTCTTCACAGAAAGGGCGGTGCTGCTGAACTTTaGCGGGGAAATCTTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WKFKKETSTGNATLHRKGGAAEL*RGNLGV Trigger: AACTCCAAGATTTCCCCGGCAAAGTTCAGCAGCACC...GCCCTTTCTGTGAAGAGTGGCGTTACCTGTGCTTGTTTCCTTCTTAAACTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR GCA 90 bp | GCTGATCTGAGGGTTGCCTGGGGCATCTGCGGAGGCATTTGGCATTTTATTATAAACAGACGCAGCAAATaGTTGGATACTGCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ADLRVAWGICGGIWHFIINRRSK*LDTAKQ Trigger: TTGCTTGGCAGTATCCAAGCATTTGCTGCGTCTGTT...TATAATAAAATGCCAAATGCCTCCGCAGATGCCCCAGGCAACCCTCAGATCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR GCA 90 bp | TGCACTGTGGTGCCTGCTCTTCTGAAGTCCGTGAGTGTGATTTCATACAGGACTGTGAAGTTCCTTGGATaGTCAATGTGTCAACAGACG | + |
|
Preference number: 4 (lower is better) Translates to: CTVVPALLKSVSVISYRTVKFLG*SMCQQT Trigger: CGTCTGTTGACACATTGAGCATCCAAGGAACTTCAC...AGTCCTGTATGAAATCACACTCACGGACTTCAGAAGAGCAGGCACCACAGTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CCA 90 bp | CATAAGGAAAGCAAGCAGCCGAGACATCTCATCCAAGCAGATGCATGCATCCAACTTCCTAGAATCCCGTaGATAGGCAGAGAAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HKESKQPRHLIQADACIQLPRIP*IGREVL Trigger: GAGAACTTCTCTGCCTATCCACGGGATTCTAGGAAG...TTGGATGCATGCATCTGCTTGGATGAGATGTCTCGGCTGCTTGCTTTCCTTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR TCA 90 bp | GACTGTGACAAATTAATGAAACAATTATACCTGTTACAGCCGTACGATCCTACACGCCTGCGGTGCTGCTaGACTTTGCCGGGGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: DCDKLMKQLYLLQPYDPTRLRCC*TLPGKS Trigger: AGATTTCCCCGGCAAAGTTCAGCAGCACCGCAGGCG...TGTAGGATCGTACGGCTGTAACAGGTATAATTGTTTCATTAATTTGTCACAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR TCA 90 bp | CATAAGGAAAGCAAGCAGCCGAGACATCTCATCCAAGCAGATGCATGCATCCAAAGATGTCTGTGTCTTTaGTGGGACTCATGTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HKESKQPRHLIQADACIQRCLCL*WDSCSP Trigger: TGGTGAACATGAGTCCCATCAAAGACACAGACATCT...TTGGATGCATGCATCTGCTTGGATGAGATGTCTCGGCTGCTTGCTTTCCTTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAGTTTAAGAAGGAAACAAGCACAGGTAACGCCACTCTTCACAGAAAGGGCACCTGGTCTTGCTCTTaGTCTTTTCCAGAGTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: WKFKKETSTGNATLHRKGTWSCS*SFPESS Trigger: TGACGACTCTGGAAAAGACCAAGAGCAAGACCAGGT...GCCCTTTCTGTGAAGAGTGGCGTTACCTGTGCTTGTTTCCTTCTTAAACTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CCA 90 bp | GCTGATCTGAGGGTTGCCTGGGGCATCTGCGGAGGCATTTGGCATTTTATTATATCCACTAGAGCCAGCTaGTTATCTTTTACTCCTATG | + |
|
Preference number: 4 (lower is better) Translates to: ADLRVAWGICGGIWHFIISTRAS*LSFTPM Trigger: CATAGGAGTAAAAGATAACCAGCTGGCTCTAGTGGA...TATAATAAAATGCCAAATGCCTCCGCAGATGCCCCAGGCAACCCTCAGATCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCGAGACATCTCATCCAAGCAGATGCATGCATCCAAAGTCATAGCTCCTTGTCCACTAGAGCCAGCTaGTTATCTTTTACTCCTATG | + |
|
Preference number: 4 (lower is better) Translates to: QPRHLIQADACIQSHSSLSTRAS*LSFTPM Trigger: CATAGGAGTAAAAGATAACCAGCTGGCTCTAGTGGA...CAAGGAGCTATGACTTTGGATGCATGCATCTGCTTGGATGAGATGTCTCGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR TCA 90 bp | GACTGTGACAAATTAATGAAACAATTATACCTGTTACAGCCGTACGATCCTACAACACCGTCGCCTGATTaGCTTGCAGGACAGGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DCDKLMKQLYLLQPYDPTTPSPD*LAGQGD Trigger: GTCTCCCTGTCCTGCAAGTCAATCAGGCGACGGTGT...TGTAGGATCGTACGGCTGTAACAGGTATAATTGTTTCATTAATTTGTCACAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR GCA 90 bp | ATTGGAAGTTTAAGAAGGAAACAAGCACAGGTAACGCCACTCTTCACAGAAAGGGGTGCTGCTGAACTTTaGCGGGGAAATCTTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IGSLRRKQAQVTPLFTERGAAEL*RGNLGV Trigger: AACTCCAAGATTTCCCCGGCAAAGTTCAGCAGCACC...CCTTTCTGTGAAGAGTGGCGTTACCTGTGCTTGTTTCCTTCTTAAACTTCCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAGTTTAAGAAGGAAACAAGCACAGGTAACGCCACTCTTCACAGAAAGGGCGTGAAGTTCCTTGGATaGTCAATGTGTCAACAGACG | + |
|
Preference number: 4 (lower is better) Translates to: WKFKKETSTGNATLHRKGVKFLG*SMCQQT Trigger: CGTCTGTTGACACATTGAGCATCCAAGGAACTTCAC...GCCCTTTCTGTGAAGAGTGGCGTTACCTGTGCTTGTTTCCTTCTTAAACTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR TCA 90 bp | GCTGATCTGAGGGTTGCCTGGGGCATCTGCGGAGGCATTTGGCATTTTATTATAATTCTTGCATTCAAATaGAACAAAGTCCGAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: ADLRVAWGICGGIWHFIIILAFK*NKVRGL Trigger: AAGTCCTCGGACTTTGTTTCATTTGAATGCAAGAAT...TATAATAAAATGCCAAATGCCTCCGCAGATGCCCCAGGCAACCCTCAGATCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| 3UTR CAA 72 bp | TCTGCAGTGCAGGGTAAAGACAGTGGAATAAGTGTGTaGGCATATAGACGTCAGAGCAAAGAGAAAGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAVQGKDSGISV*AYRRQSKEKES Trigger: GCTTTCTTTCTCTTTGCTCTGACGTCTATATGCCAACACACTTATTCCACTGTCTTTACCCTGCACTGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR TCA 90 bp | CATAAGGAAAGCAAGCAGCCGAGACATCTCATCCAAGCAGATGCATGCATCCAAATTCTTGCATTCAAATaGAACAAAGTCCGAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: HKESKQPRHLIQADACIQILAFK*NKVRGL Trigger: AAGTCCTCGGACTTTGTTTCATTTGAATGCAAGAAT...TTGGATGCATGCATCTGCTTGGATGAGATGTCTCGGCTGCTTGCTTTCCTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR GCA 90 bp | CACCATGAGATCCCATTCTATTGGCATGTCCTAGTGTATATCCTGATCAGTTCTAACAGACGCAGCAAATaGTTGGATACTGCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HHEIPFYWHVLVYILISSNRRSK*LDTAKQ Trigger: TTGCTTGGCAGTATCCAAGCATTTGCTGCGTCTGTT...AGAACTGATCAGGATATACACTAGGACATGCCAATAGAATGGGATCTCATGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CCA 90 bp | GCTGATCTGAGGGTTGCCTGGGGCATCTGCGGAGGCATTTGGCATTTTATTATAACAAAACTAACAGATTaGTCATTGTATGTACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ADLRVAWGICGGIWHFIITKLTD*SLYVLR Trigger: CCTGAGTACATACAATGACCAATCTGTTAGTTTTGT...TATAATAAAATGCCAAATGCCTCCGCAGATGCCCCAGGCAACCCTCAGATCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CCA 90 bp | TGCACTGTGGTGCCTGCTCTTCTGAAGTCCGTGAGTGTGATTTCATACAGGACTACAAAACTAACAGATTaGTCATTGTATGTACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CTVVPALLKSVSVISYRTTKLTD*SLYVLR Trigger: CCTGAGTACATACAATGACCAATCTGTTAGTTTTGT...AGTCCTGTATGAAATCACACTCACGGACTTCAGAAGAGCAGGCACCACAGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CCA 90 bp | AATTGGAAGTTTAAGAAGGAAACAAGCACAGGTAACGCCACTCTTCACAGAAAGACCTGGTCTTGCTCTTaGTCTTTTCCAGAGTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NWKFKKETSTGNATLHRKTWSCS*SFPESS Trigger: TGACGACTCTGGAAAAGACCAAGAGCAAGACCAGGT...CTTTCTGTGAAGAGTGGCGTTACCTGTGCTTGTTTCCTTCTTAAACTTCCAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CCA 90 bp | ATTGGAAGTTTAAGAAGGAAACAAGCACAGGTAACGCCACTCTTCACAGAAAGGTTGCCGGGGAAATCTTaGAGTTGGAATACTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: IGSLRRKQAQVTPLFTERLPGKS*SWNTSF Trigger: GAATGAAGTATTCCAACTCCAAGATTTCCCCGGCAA...CCTTTCTGTGAAGAGTGGCGTTACCTGTGCTTGTTTCCTTCTTAAACTTCCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTCTGTTACCCTTTCTTCAGTTGGAAGCATTAAGTCATTCAACCCAGAAGACGCAGCAAATGCTTaGATACTGCCAAGCAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLSVTLSSVGSIKSFNPEDAANA*ILPSKD Trigger: ATCCTTGCTTGGCAGTATCCAAGCATTTGCTGCGTC...TTCTGGGTTGAATGACTTAATGCTTCCAACTGAAGAAAGGGTAACAGAGAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CCA 90 bp | AATTGGAAGTTTAAGAAGGAAACAAGCACAGGTAACGCCACTCTTCACAGAAAGCATGGCAGAATTCTTTaGTCTTCTGTTGGGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NWKFKKETSTGNATLHRKHGRIL*SSVGIF Trigger: GAAGATCCCAACAGAAGACCAAAGAATTCTGCCATG...CTTTCTGTGAAGAGTGGCGTTACCTGTGCTTGTTTCCTTCTTAAACTTCCAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR GCA 90 bp | GACTGTGACAAATTAATGAAACAATTATACCTGTTACAGCCGTACGATCCTACACAAATGCTTGGATACTaGCAAGCAAGGATCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DCDKLMKQLYLLQPYDPTQMLGY*QARISS Trigger: GGAAGAGATCCTTGCTTGGCAGTATCCAAGCATTTG...TGTAGGATCGTACGGCTGTAACAGGTATAATTGTTTCATTAATTTGTCACAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTCTGTTACCCTTTCTTCAGTTGGAAGCATTAAGTCATTCAACCCAGAATTGCCGGGGAAATCTTaGAGTTGGAATACTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: FLSVTLSSVGSIKSFNPELPGKS*SWNTSF Trigger: GAATGAAGTATTCCAACTCCAAGATTTCCCCGGCAA...TTCTGGGTTGAATGACTTAATGCTTCCAACTGAAGAAAGGGTAACAGAGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR GCA 90 bp | CACCATGAGATCCCATTCTATTGGCATGTCCTAGTGTATATCCTGATCAGTTCTTGCCAGGAAGATTCTTaGATTCAAATGAAACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HHEIPFYWHVLVYILISSCQEDS*IQMKQS Trigger: ACTTTGTTTCATTTGAATGCAAGAATCTTCCTGGCA...AGAACTGATCAGGATATACACTAGGACATGCCAATAGAATGGGATCTCATGGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CCA 90 bp | AATTGGAAGTTTAAGAAGGAAACAAGCACAGGTAACGCCACTCTTCACAGAAAGTCTTTGGTCTTCTGTTaGGATCTTCTTATTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NWKFKKETSTGNATLHRKSLVFC*DLLILQ Trigger: TTGCAAAATAAGAAGATCCCAACAGAAGACCAAAGA...CTTTCTGTGAAGAGTGGCGTTACCTGTGCTTGTTTCCTTCTTAAACTTCCAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTCTGTTACCCTTTCTTCAGTTGGAAGCATTAAGTCATTCAACCCAGAATGCCAGGAAGATTCTTaGATTCAAATGAAACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FLSVTLSSVGSIKSFNPECQEDS*IQMKQS Trigger: ACTTTGTTTCATTTGAATGCAAGAATCTTCCTGGCA...TTCTGGGTTGAATGACTTAATGCTTCCAACTGAAGAAAGGGTAACAGAGAGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CCA 90 bp | GACTGTGACAAATTAATGAAACAATTATACCTGTTACAGCCGTACGATCCTACATCTTTGGTCTTCTGTTaGGATCTTCTTATTTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DCDKLMKQLYLLQPYDPTSLVFC*DLLILQ Trigger: TTGCAAAATAAGAAGATCCCAACAGAAGACCAAAGA...TGTAGGATCGTACGGCTGTAACAGGTATAATTGTTTCATTAATTTGTCACAGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS TCA 90 bp | CGGAGTAGTCCTTGTCGTTGGCATGCAGCCAGATGTCTGTGTCTTTaGTGGGACTCATGTTCACCATCAGCTTCTTCCCATCCACACCGT | + |
|
Preference number: 5 (lower is better) Translates to: RSSPCRWHAARCLCL*WDSCSPSASSHPHR Trigger: ACGGTGTGGATGGGAAGAAGCTGATGGTGAACATGAGTCCCATCAAAGACACAGACATCTGGCTGCATGCCAACGACAAGGACTACTCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 ENSMUST00000177518.8 |
||
| CDS TCA 90 bp | GGAAGATTCTTGCATTCAAATGAAACAAAGTCCGAGGACTTTTTGTaGAGGACGAAGAAGGCCTGTTCCGGAGGCGAGACGTCACCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRFLHSNETKSEDFL*RTKKACSGGETSPL Trigger: AAGGGGTGACGTCTCGCCTCCGGAACAGGCCTTCTTCGTCCTTCACAAAAAGTCCTCGGACTTTGTTTCATTTGAATGCAAGAATCTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 ENSMUST00000177518.8 |
||
| CDS-3UTR CAA 90 bp | GCTGATCTGAGGGTTGCCTGGGGCATCTGCGGAGGCATTTGGCATTTTATTATAGGGGAAATCTTGGAGTaGGAATACTTCATTCTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ADLRVAWGICGGIWHFIIGEILE*EYFILG Trigger: ACCTAGAATGAAGTATTCCAACTCCAAGATTTCCCC...TATAATAAAATGCCAAATGCCTCCGCAGATGCCCCAGGCAACCCTCAGATCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCGAGACATCTCATCCAAGCAGATGCATGCATCCAAAGTCATAGCTCCTTGTTTGCCGGGGAAATCTaGGAGTTGGAATACTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: QPRHLIQADACIQSHSSLFAGEI*ELEYFI Trigger: AATGAAGTATTCCAACTCCAAGATTTCCCCGGCAAA...CAAGGAGCTATGACTTTGGATGCATGCATCTGCTTGGATGAGATGTCTCGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CAA 90 bp | ATTGGAAGTTTAAGAAGGAAACAAGCACAGGTAACGCCACTCTTCACAGAAAGGCACCTGGTCTTGCTCTaGGTCTTTTCCAGAGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: IGSLRRKQAQVTPLFTERHLVLL*VFSRVV Trigger: GACGACTCTGGAAAAGACCAAGAGCAAGACCAGGTG...CCTTTCTGTGAAGAGTGGCGTTACCTGTGCTTGTTTCCTTCTTAAACTTCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CAA 90 bp | TGCACTGTGGTGCCTGCTCTTCTGAAGTCCGTGAGTGTGATTTCATACAGGACTAAGTTCTCTTCATGCTaGGTACCCGATTTTAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: CTVVPALLKSVSVISYRTKFSSC*VPDFSE Trigger: TTCACTAAAATCGGGTACCAAGCATGAAGAGAACTT...AGTCCTGTATGAAATCACACTCACGGACTTCAGAAGAGCAGGCACCACAGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CAA 90 bp | AATTGGAAGTTTAAGAAGGAAACAAGCACAGGTAACGCCACTCTTCACAGAAAGCACCTGGTCTTGCTCTaGGTCTTTTCCAGAGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: NWKFKKETSTGNATLHRKHLVLL*VFSRVV Trigger: GACGACTCTGGAAAAGACCAAGAGCAAGACCAGGTG...CTTTCTGTGAAGAGTGGCGTTACCTGTGCTTGTTTCCTTCTTAAACTTCCAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS GCA 90 bp | TCTCCTCCACTAGAGCCAGCTGGTTATCTTTTACTCCTATGTAAGTaGCAGGAAGATTCTTGCATTCAAATGAAACAAAGTCCGAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SPPLEPAGYLLLLCK*QEDSCIQMKQSPRT Trigger: AGTCCTCGGACTTTGTTTCATTTGAATGCAAGAATCTTCCTGGCACTTACATAGGAGTAAAAGATAACCAGCTGGCTCTAGTGGAGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CAA 90 bp | AATTGGAAGTTTAAGAAGGAAACAAGCACAGGTAACGCCACTCTTCACAGAAAGCAGATGTCTGTGTCTTaGATGGGACTCATGTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: NWKFKKETSTGNATLHRKQMSVS*MGLMFT Trigger: GGTGAACATGAGTCCCATCAAAGACACAGACATCTG...CTTTCTGTGAAGAGTGGCGTTACCTGTGCTTGTTTCCTTCTTAAACTTCCAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTCTGTTACCCTTTCTTCAGTTGGAAGCATTAAGTCATTCAACCCAGAACAGATGTCTGTGTCTTaGATGGGACTCATGTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: FLSVTLSSVGSIKSFNPEQMSVS*MGLMFT Trigger: GGTGAACATGAGTCCCATCAAAGACACAGACATCTG...TTCTGGGTTGAATGACTTAATGCTTCCAACTGAAGAAAGGGTAACAGAGAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS GCA 90 bp | CCAGCTGGTTATCTTTTACTCCTATGTAAGTGCCAGGAAGATTCTTaGATTCAAATGAAACAAAGTCCGAGGACTTTTTGTGAAGGACGA | + |
|
Preference number: 5 (lower is better) Translates to: PAGYLLLLCKCQEDS*IQMKQSPRTFCEGR Trigger: TCGTCCTTCACAAAAAGTCCTCGGACTTTGTTTCATTTGAATGCAAGAATCTTCCTGGCACTTACATAGGAGTAAAAGATAACCAGCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CAA 90 bp | ATTTGGCATTTTATTATAAGTGAGAAACAGTCAGTCTTTGCAGCAGCTGGTCCTGGGGAAATCTTGGAGTaGGAATACTTCATTCTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: IWHFIISEKQSVFAAAGPGEILE*EYFILG Trigger: ACCTAGAATGAAGTATTCCAACTCCAAGATTTCCCC...AGGACCAGCTGCTGCAAAGACTGACTGTTTCTCACTTATAATAAAATGCCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CAA 90 bp | ATTTGGCATTTTATTATAAGTGAGAAACAGTCAGTCTTTGCAGCAGCTGGTCCTTTTGCCGGGGAAATCTaGGAGTTGGAATACTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: IWHFIISEKQSVFAAAGPFAGEI*ELEYFI Trigger: AATGAAGTATTCCAACTCCAAGATTTCCCCGGCAAA...AGGACCAGCTGCTGCAAAGACTGACTGTTTCTCACTTATAATAAAATGCCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CAA 90 bp | AATTGGAAGTTTAAGAAGGAAACAAGCACAGGTAACGCCACTCTTCACAGAAAGAAGTTCTCTTCATGCTaGGTACCCGATTTTAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: NWKFKKETSTGNATLHRKKFSSC*VPDFSE Trigger: TTCACTAAAATCGGGTACCAAGCATGAAGAGAACTT...CTTTCTGTGAAGAGTGGCGTTACCTGTGCTTGTTTCCTTCTTAAACTTCCAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS-3UTR CAA 90 bp | GACTGTGACAAATTAATGAAACAATTATACCTGTTACAGCCGTACGATCCTACAACATGGCAGAATTCTTaGGTCTTCTGTTGGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: DCDKLMKQLYLLQPYDPTTWQNS*VFCWDL Trigger: AAGATCCCAACAGAAGACCAAAGAATTCTGCCATGT...TGTAGGATCGTACGGCTGTAACAGGTATAATTGTTTCATTAATTTGTCACAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS CAA 90 bp | GTGAAGGACGAAGAAGGCCTGTTCCGGAGGCGAGACGTCACCCCTTaGAAGCTCCACGGAGTAGTCCTTGTCGTTGGCATGCAGCCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: VKDEEGLFRRRDVTP*KLHGVVLVVGMQPD Trigger: ATCTGGCTGCATGCCAACGACAAGGACTACTCCGTGGAGCTTCAAAGGGGTGACGTCTCGCCTCCGGAACAGGCCTTCTTCGTCCTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 ENSMUST00000177518.8 |
||
| CDS GCA 72 bp | CGGGACCAGGGCTTCGCCTGCGGTGCTGCTGAACTTTaGCGGGGAAATCTTGGAGTTGGAATACTTCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: RDQGFACGAAEL*RGNLGVGILHS Trigger: AGAATGAAGTATTCCAACTCCAAGATTTCCCCGGCAAAGTTCAGCAGCACCGCAGGCGAAGCCCTGGTCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 ENSMUST00000144528.8 ENSMUST00000177518.8 |
||
| CDS TCA 72 bp | GTTCACCATCAGCTTCTTCCCATCCACACCGTCGCCTaGTTGACTTGCAGGACAGGGAGACTCATAGTAGCG | + |
|
Preference number: 6 (lower is better) Translates to: VHHQLLPIHTVA*LTCRTGRLIVA Trigger: CGCTACTATGAGTCTCCCTGTCCTGCAAGTCAATCAGGCGACGGTGTGGATGGGAAGAAGCTGATGGTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 |
||
| CDS GCA 72 bp | AGAATTCTTTGGTCTTCTGTTGGGATCTTCTTATTTTaGAAGGCGGGACCAGGGCTTCGCCTGCGGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RILWSSVGIFLF*KAGPGLRLRCC Trigger: GCAGCACCGCAGGCGAAGCCCTGGTCCCGCCTTGCAAAATAAGAAGATCCCAACAGAAGACCAAAGAATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 ENSMUST00000144528.8 ENSMUST00000177518.8 |
||
| CDS CAA 72 bp | CAGAATTCTTTGGTCTTCTGTTGGGATCTTCTTATTTaGCAAGGCGGGACCAGGGCTTCGCCTGCGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QNSLVFCWDLLI*QGGTRASPAVL Trigger: CAGCACCGCAGGCGAAGCCCTGGTCCCGCCTTGCAAAATAAGAAGATCCCAACAGAAGACCAAAGAATTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 ENSMUST00000144528.8 ENSMUST00000177518.8 |
||
| CDS GCA 72 bp | TTCACCATCAGCTTCTTCCCATCCACACCGTCGCCTTaGTCTTGGTCTTTTCCAGAGTCGTCAACATTGATC | + |
|
Preference number: 6 (lower is better) Translates to: FTISFFPSTPSP*SWSFPESSTLI Trigger: GATCAATGTTGACGACTCTGGAAAAGACCAAGAGCAAGGCGACGGTGTGGATGGGAAGAAGCTGATGGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177518.8 |
||
| CDS CAA 72 bp | TCCTTGTCGTTGGCATGCAGCCAGATGTCTGTGTCTTaGATGGGACTCATGTTCACCATCAGCTTCTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SLSLACSQMSVS*MGLMFTISFFP Trigger: TGGGAAGAAGCTGATGGTGAACATGAGTCCCATCAAAGACACAGACATCTGGCTGCATGCCAACGACAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 ENSMUST00000177518.8 |
||
| CDS CAA 72 bp | GTTCACCATCAGCTTCTTCCCATCCACACCGTCGCCTaGCTCTTGGTCTTTTCCAGAGTCGTCAACATTGAT | + |
|
Preference number: 6 (lower is better) Translates to: VHHQLLPIHTVA*LLVFSRVVNID Trigger: ATCAATGTTGACGACTCTGGAAAAGACCAAGAGCAAGGCGACGGTGTGGATGGGAAGAAGCTGATGGTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177518.8 |
||
| CDS TCA 72 bp | TTGCATTCAAATGAAACAAAGTCCGAGGACTTTTTGTaGAGGACGAAGAAGGCCTGTTCCGGAGGCGAGACG | + |
|
Preference number: 6 (lower is better) Translates to: LHSNETKSEDFL*RTKKACSGGET Trigger: CGTCTCGCCTCCGGAACAGGCCTTCTTCGTCCTTCACAAAAAGTCCTCGGACTTTGTTTCATTTGAATGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 ENSMUST00000177518.8 |
||
| CDS CCA 72 bp | GATACTGCCAAGCAAGGATCTCTTCCTAGAATCCCGTaGATAGGCAGAGAAGTTCTCTTCATGCTTGGTACC | + |
|
Preference number: 6 (lower is better) Translates to: DTAKQGSLPRIP*IGREVLFMLGT Trigger: GGTACCAAGCATGAAGAGAACTTCTCTGCCTATCCACGGGATTCTAGGAAGAGATCCTTGCTTGGCAGTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 ENSMUST00000136850.2 ENSMUST00000177518.8 |
||
| CDS CAA 72 bp | CATGCAGTAGACATGGCAGAATTCTTTGGTCTTCTGTaGGGATCTTCTTATTTTGCAAGGCGGGACCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: HAVDMAEFFGLL*GSSYFARRDQG Trigger: GCCCTGGTCCCGCCTTGCAAAATAAGAAGATCCCAACAGAAGACCAAAGAATTCTGCCATGTCTACTGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 ENSMUST00000144528.8 ENSMUST00000177518.8 |
||
| CDS CAA 72 bp | CATCAGCTTCTTCCCATCCACACCGTCGCCTTGCTCTaGGTCTTTTCCAGAGTCGTCAACATTGATCACATA | + |
|
Preference number: 6 (lower is better) Translates to: HQLLPIHTVALL*VFSRVVNIDHI Trigger: TATGTGATCAATGTTGACGACTCTGGAAAAGACCAAGAGCAAGGCGACGGTGTGGATGGGAAGAAGCTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177518.8 |
||
| CDS GCA 72 bp | TCCTTGGATGCTCAATGTGTCAACAGACGCAGCAAATaGTTGGATACTGCCAAGCAAGGATCTCTTCCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLDAQCVNRRSK*LDTAKQGSLPR Trigger: TCTAGGAAGAGATCCTTGCTTGGCAGTATCCAAGCATTTGCTGCGTCTGTTGACACATTGAGCATCCAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 ENSMUST00000177518.8 |
||
| CDS CCA 72 bp | TGGATGCTCAATGTGTCAACAGACGCAGCAAATGCTTaGATACTGCCAAGCAAGGATCTCTTCCTAGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: WMLNVSTDAANA*ILPSKDLFLES Trigger: GGATTCTAGGAAGAGATCCTTGCTTGGCAGTATCCAAGCATTTGCTGCGTCTGTTGACACATTGAGCATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 ENSMUST00000177518.8 |
||
| CDS CAA 72 bp | CACATAACATCCATTCTCCAAAACAAAACTAACAGATaGGTCATTGTATGTACTCAGGGAGGCAGGAGACTG | + |
|
Preference number: 6 (lower is better) Translates to: HITSILQNKTNR*VIVCTQGGRRL Trigger: CAGTCTCCTGCCTCCCTGAGTACATACAATGACCAATCTGTTAGTTTTGTTTTGGAGAATGGATGTTATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 ENSMUST00000177518.8 |
||
| CDS CAA 72 bp | CATCCATTCTCCAAAACAAAACTAACAGATTGGTCATaGTATGTACTCAGGGAGGCAGGAGACTGTGTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: HPFSKTKLTDWS*YVLREAGDCVK Trigger: TTTAACACAGTCTCCTGCCTCCCTGAGTACATACAATGACCAATCTGTTAGTTTTGTTTTGGAGAATGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 ENSMUST00000177518.8 |
||
| CDS GCA 72 bp | TATCTTTTACTCCTATGTAAGTGCCAGGAAGATTCTTaGATTCAAATGAAACAAAGTCCGAGGACTTTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: YLLLLCKCQEDS*IQMKQSPRTFC Trigger: ACAAAAAGTCCTCGGACTTTGTTTCATTTGAATGCAAGAATCTTCCTGGCACTTACATAGGAGTAAAAGATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025724.9 ENSMUST00000120388.9 ENSMUST00000177518.8 |
||