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Pregenerated sensors for IL3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000018914

Ensembl transcript IDs: ENSMUST00000019058.6

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp GATAAGACATTTGATGGCATAAAGGAATGTAAAATCCTTTTGACCATGGGCCATAGAGACGGAGCCAGATaGGGGCTGAGGTGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: DKTFDGIKECKILLTMGHRDGAR*GLRWSR
Trigger: TCTAGACCACCTCAGCCCGCATCTGGCTCCGTCTCT...ATGGCCCATGGTCAAAAGGATTTTACATTCCTTTATGCCATCAAATGTCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019058.6
CDS-3UTR CCA 90 bp GATAAGACATTTGATGGCATAAAGGAATGTAAAATCCTTTTGACCATGGGCCATGCTTGGAGTCCCAGGTaGAAGAGCATCAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: DKTFDGIKECKILLTMGHAWSPR*KSIRSR
Trigger: CCTGCTCCTGATGCTCTTCCACCTGGGACTCCAAGC...ATGGCCCATGGTCAAAAGGATTTTACATTCCTTTATGCCATCAAATGTCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019058.6
CDS-3UTR TCA 90 bp AAGACATTTGATGGCATAAAGGAATGTAAAATCCTTTTGACCATGGGCCATGAGCTTCATCATCAGTTTTaGGTTCAGGTTCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: KTFDGIKECKILLTMGHELHHQF*VQVLGA
Trigger: AGCTCCCAGAACCTGAACTCAAAACTGATGATGAAG...CTCATGGCCCATGGTCAAAAGGATTTTACATTCCTTTATGCCATCAAATGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000019058.6
3UTR CAA 72 bp AAGACATTTGATGGCATAAAGGAATGTAAAATCCTTTaGACCATGGGCCATGAGGAACATTCAGACTTTAGG +
Preference number: 4 (lower is better)
Translates to: KTFDGIKECKIL*TMGHEEHSDFR
Trigger: CCTAAAGTCTGAATGTTCCTCATGGCCCATGGTCAAAAGGATTTTACATTCCTTTATGCCATCAAATGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019058.6
CDS CCA 90 bp ATTCCTCAGAGAGGGTCCTTCATCATCAGTTTTGAGTTCAGGTTCTaGGAGCTTCCCTATAATCTCCTTGACAATAGAGCTGCAATTCAA +
Preference number: 5 (lower is better)
Translates to: IPQRGSFIISFEFRF*ELPYNLLDNRAAIQ
Trigger: TTGAATTGCAGCTCTATTGTCAAGGAGATTATAGGGAAGCTCCCAGAACCTGAACTCAAAACTGATGATGAAGGACCCTCTCTGAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019058.6
CDS-3UTR CAA 90 bp AAGACATTTGATGGCATAAAGGAATGTAAAATCCTTTTGACCATGGGCCATGAGCCTTCATCATCAGTTTaGAGTTCAGGTTCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: KTFDGIKECKILLTMGHEPSSSV*SSGSGS
Trigger: GCTCCCAGAACCTGAACTCAAAACTGATGATGAAGG...CTCATGGCCCATGGTCAAAAGGATTTTACATTCCTTTATGCCATCAAATGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019058.6
CDS-3UTR CAA 90 bp GATAAGACATTTGATGGCATAAAGGAATGTAAAATCCTTTTGACCATGGGCCATTGGCTTTCCACGAATTaGGACAGGTTTACTCTCCGA +
Preference number: 5 (lower is better)
Translates to: DKTFDGIKECKILLTMGHWLSTN*DRFTLR
Trigger: TCGGAGAGTAAACCTGTCCAAATTCGTGGAAAGCCA...ATGGCCCATGGTCAAAAGGATTTTACATTCCTTTATGCCATCAAATGTCTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019058.6
CDS-3UTR CAA 90 bp GATAAGACATTTGATGGCATAAAGGAATGTAAAATCCTTTTGACCATGGGCCATAGGATCCACTTCTCCTaGGCTTTCCACGAATTTGGA +
Preference number: 5 (lower is better)
Translates to: DKTFDGIKECKILLTMGHRIHFS*AFHEFG
Trigger: TCCAAATTCGTGGAAAGCCAAGGAGAAGTGGATCCT...ATGGCCCATGGTCAAAAGGATTTTACATTCCTTTATGCCATCAAATGTCTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000019058.6
CDS CCA 72 bp GTATCCCGGCCACTGATTGAAGCTTGGAGTCCCAGGTaGAAGAGCATCAGGAGCAGGAGCAGCATGGTGTGG +
Preference number: 6 (lower is better)
Translates to: VSRPLIEAWSPR*KSIRSRSSMVW
Trigger: CCACACCATGCTGCTCCTGCTCCTGATGCTCTTCCACCTGGGACTCCAAGCTTCAATCAGTGGCCGGGATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019058.6
CDS CCA 72 bp GTTAAACGGTGGGTATCCCGGCCACTGATTGAAGCTTaGAGTCCCAGGTGGAAGAGCATCAGGAGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: VKRWVSRPLIEA*SPRWKSIRSRS
Trigger: GCTCCTGCTCCTGATGCTCTTCCACCTGGGACTCCAAGCTTCAATCAGTGGCCGGGATACCCACCGTTTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019058.6
CDS TCA 72 bp ATCTCAGTTTCTTCCGAAAGTCATCCAGATCTCGAATaGAGACCCCTGGCAGCGCAGAGTCATTCGCAGATG +
Preference number: 6 (lower is better)
Translates to: ISVSSESHPDLE*RPLAAQSHSQM
Trigger: CATCTGCGAATGACTCTGCGCTGCCAGGGGTCTTCATTCGAGATCTGGATGACTTTCGGAAGAAACTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019058.6
CDS CCA 72 bp CCTCAGGATCCACTTCTCCTTGGCTTTCCACGAATTTaGACAGGTTTACTCTCCGAAAGCTCTTATTCCTCA +
Preference number: 6 (lower is better)
Translates to: PQDPLLLGFPRI*TGLLSESSYSS
Trigger: TGAGGAATAAGAGCTTTCGGAGAGTAAACCTGTCCAAATTCGTGGAAAGCCAAGGAGAAGTGGATCCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019058.6
CDS CAA 72 bp TCCTCAGGATCCACTTCTCCTTGGCTTTCCACGAATTaGGACAGGTTTACTCTCCGAAAGCTCTTATTCCTC +
Preference number: 6 (lower is better)
Translates to: SSGSTSPWLSTN*DRFTLRKLLFL
Trigger: GAGGAATAAGAGCTTTCGGAGAGTAAACCTGTCCAAATTCGTGGAAAGCCAAGGAGAAGTGGATCCTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019058.6
CDS CCA 72 bp TTGATAACGTATCTGTCCTCAGGATCCACTTCTCCTTaGCTTTCCACGAATTTGGACAGGTTTACTCTCCGA +
Preference number: 6 (lower is better)
Translates to: LITYLSSGSTSP*LSTNLDRFTLR
Trigger: TCGGAGAGTAAACCTGTCCAAATTCGTGGAAAGCCAAGGAGAAGTGGATCCTGAGGACAGATACGTTATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019058.6
CDS CAA 72 bp CTCTTATTCCTCAGAGAGGGTCCTTCATCATCAGTTTaGAGTTCAGGTTCTGGGAGCTTCCCTATAATCTCC +
Preference number: 6 (lower is better)
Translates to: LLFLREGPSSSV*SSGSGSFPIIS
Trigger: GGAGATTATAGGGAAGCTCCCAGAACCTGAACTCAAAACTGATGATGAAGGACCCTCTCTGAGGAATAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019058.6
CDS CAA 90 bp AAGATTGGACTTGATAACGTATCTGTCCTCAGGATCCACTTCTCCTaGGCTTTCCACGAATTTGGACAGGTTTACTCTCCGAAAGCTCTT +
Preference number: 6 (lower is better)
Translates to: KIGLDNVSVLRIHFS*AFHEFGQVYSPKAL
Trigger: AAGAGCTTTCGGAGAGTAAACCTGTCCAAATTCGTGGAAAGCCAAGGAGAAGTGGATCCTGAGGACAGATACGTTATCAAGTCCAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000019058.6
CDS CCA 72 bp AGAGGGTCCTTCATCATCAGTTTTGAGTTCAGGTTCTaGGAGCTTCCCTATAATCTCCTTGACAATAGAGCT +
Preference number: 6 (lower is better)
Translates to: RGSFIISFEFRF*ELPYNLLDNRA
Trigger: AGCTCTATTGTCAAGGAGATTATAGGGAAGCTCCCAGAACCTGAACTCAAAACTGATGATGAAGGACCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000019058.6