Pregenerated sensors for IL2RG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031304Ensembl transcript IDs: ENSMUST00000033664.14, ENSMUST00000135038.2
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGTAACCCCAACTCTTATGAGGCAGAGGTGGGAGGATAGCCTGTaGGTTGGAGGCCAACCTGGCCTACATAGTGAGCTCCCAGCCACC | + |
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Preference number: 1 (lower is better) Translates to: PVTPTLMRQRWEDSL*VGGQPGLHSELPAT Trigger: GGTGGCTGGGAGCTCACTATGTAGGCCAGGTTGGCCTCCAACTCACAGGCTATCCTCCCACCTCTGCCTCATAAGAGTTGGGGTTACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| 3UTR CCA 90 bp | AGGGAGGGAGAATCCTATAAAAGAGAAGGACCATGCTGGGTGTGGTaGTGCATGCCAGTAACCCCAACTCTTATGAGGCAGAGGTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: REGESYKREGPCWVW*CMPVTPTLMRQRWE Trigger: CTCCCACCTCTGCCTCATAAGAGTTGGGGTTACTGGCATGCACCACCACACCCAGCATGGTCCTTCTCTTTTATAGGATTCTCCCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| 3UTR GCA 90 bp | GAGGGAGAATCCTATAAAAGAGAAGGACCATGCTGGGTGTGGTGGTaGATGCCAGTAACCCCAACTCTTATGAGGCAGAGGTGGGAGGAT | + |
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Preference number: 1 (lower is better) Translates to: EGESYKREGPCWVWW*MPVTPTLMRQRWED Trigger: ATCCTCCCACCTCTGCCTCATAAGAGTTGGGGTTACTGGCATGCACCACCACACCCAGCATGGTCCTTCTCTTTTATAGGATTCTCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| 3UTR CAA 90 bp | CTCTTCAAAGAAAGTGGAAAGGTGTTAGGCTGGGCATGGGAGGGCTaGTGCAGGGAAAGAGGGCAAGGGACACTCTCAAGTAGGGCATAT | + |
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Preference number: 2 (lower is better) Translates to: LFKESGKVLGWAWEG*CRERGQGTLSSRAY Trigger: ATATGCCCTACTTGAGAGTGTCCCTTGCCCTCTTTCCCTGCACAAGCCCTCCCATGCCCAGCCTAACACCTTTCCACTTTCTTTGAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGGGAGAATCCTATAAAAGAGAAGGACCATGCTGGGTGTGGTGGTGCATGGAAGGCAGTGAGCATTaGATCCAGATTGCCAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: REGESYKREGPCWVWWCMEGSEH*IQIAKV Trigger: CACCTTGGCAATCTGGATCCAATGCTCACTGCCTTC...CATGCACCACCACACCCAGCATGGTCCTTCTCTTTTATAGGATTCTCCCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| 3UTR-3UTR CCA 90 bp | GGTAGAAAAAGGGAGGGAGAATCCTATAAAAGAGAAGGACCATGCTGGGTGTGGTCTCTTCAAAGAAAGTaGAAAGGTGTTAGGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: GRKREGESYKREGPCWVWSLQRK*KGVRLG Trigger: GCCCAGCCTAACACCTTTCCACTTTCTTTGAAGAGA...CCACACCCAGCATGGTCCTTCTCTTTTATAGGATTCTCCCTCCCTTTTTCTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| 3UTR-3UTR CCA 90 bp | GGAGAATCCTATAAAAGAGAAGGACCATGCTGGGTGTGGTGGTGCATGCCAGTAAGAAAAGCAGTTACATaGGACAGGAAATCGAAACTT | + |
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Preference number: 2 (lower is better) Translates to: GESYKREGPCWVWWCMPVRKAVT*DRKSKL Trigger: AAGTTTCGATTTCCTGTCCCATGTAACTGCTTTTCT...TACTGGCATGCACCACCACACCCAGCATGGTCCTTCTCTTTTATAGGATTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| 3UTR GCA 72 bp | AGTGGAAAGGTGTTAGGCTGGGCATGGGAGGGCTTGTaGAGGGAAAGAGGGCAAGGGACACTCTCAAGTAGG | + |
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Preference number: 3 (lower is better) Translates to: SGKVLGWAWEGL*RERGQGTLSSR Trigger: CCTACTTGAGAGTGTCCCTTGCCCTCTTTCCCTGCACAAGCCCTCCCATGCCCAGCCTAACACCTTTCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| 3UTR TCA 72 bp | CCAACTCTTATGAGGCAGAGGTGGGAGGATAGCCTGTaGGTTGGAGGCCAACCTGGCCTACATAGTGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: PTLMRQRWEDSL*VGGQPGLHSEL Trigger: GAGCTCACTATGTAGGCCAGGTTGGCCTCCAACTCACAGGCTATCCTCCCACCTCTGCCTCATAAGAGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| 3UTR CCA 72 bp | CTCTTCAAAGAAAGTGGAAAGGTGTTAGGCTGGGCATaGGAGGGCTTGTGCAGGGAAAGAGGGCAAGGGACA | + |
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Preference number: 3 (lower is better) Translates to: LFKESGKVLGWA*EGLCRERGQGT Trigger: TGTCCCTTGCCCTCTTTCCCTGCACAAGCCCTCCCATGCCCAGCCTAACACCTTTCCACTTTCTTTGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| 3UTR CCA 72 bp | AATCTCGCTGACGTGGCAGAACCGTTCACTGTAGTCTaGCTGCAGACTCTCAGTCAGCCCTTTAGACACACC | + |
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Preference number: 3 (lower is better) Translates to: NLADVAEPFTVV*LQTLSQPFRHT Trigger: GGTGTGTCTAAAGGGCTGACTGAGAGTCTGCAGCCAGACTACAGTGAACGGTTCTGCCACGTCAGCGAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135038.2 |
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| 3UTR CCA 72 bp | GGAGAATCCTATAAAAGAGAAGGACCATGCTGGGTGTaGTGGTGCATGCCAGTAACCCCAACTCTTATGAGG | + |
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Preference number: 3 (lower is better) Translates to: GESYKREGPCWV*WCMPVTPTLMR Trigger: CCTCATAAGAGTTGGGGTTACTGGCATGCACCACCACACCCAGCATGGTCCTTCTCTTTTATAGGATTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR CCA 90 bp | TCTCTTCAAAGAAAGTGGAAAGGTGTTAGGCTGGGCATGGGAGGGCTTGTGCAGCGCCTCTGGGGTTTCTaGGGGTCCTGGAGCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: SLQRKWKGVRLGMGGLVQRLWGF*GSWSWT Trigger: TGTCCAGCTCCAGGACCCCCAGAAACCCCAGAGGCG...CTGCACAAGCCCTCCCATGCCCAGCCTAACACCTTTCCACTTTCTTTGAAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR CCA 90 bp | CTCAGTCAGCCCTTTAGACACACCACTCCAGGCCGAAAAGTTCCCTTGGTATTCCGCCTCTGGGGTTTCTaGGGGTCCTGGAGCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: LSQPFRHTTPGRKVPLVFRLWGF*GSWSWT Trigger: TGTCCAGCTCCAGGACCCCCAGAAACCCCAGAGGCG...GAATACCAAGGGAACTTTTCGGCCTGGAGTGGTGTGTCTAAAGGGCTGACTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135038.2 |
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| CDS-3UTR CCA 90 bp | GCCCCAAGGGAAGGCAGTGAGCATTGGATCCAGATTGCCAAGGTGAGTAGGGGAAAAGCACTGAACCTCTaGAAGGGGCAGAGTAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: APREGSEHWIQIAKVSRGKALNL*KGQSRS Trigger: GCTCCTACTCTGCCCCTTCCAGAGGTTCAGTGCTTT...TCCCCTACTCACCTTGGCAATCTGGATCCAATGCTCACTGCCTTCCCTTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR GCA 90 bp | AGTGGAAAGGTGTTAGGCTGGGCATGGGAGGGCTTGTGCAGGGAAAGAGGGCAAAGCTTCGATCTCTGTTaGTCCGGTACTGCACCAAGT | + |
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Preference number: 4 (lower is better) Translates to: SGKVLGWAWEGLCRERGQSFDLC*SGTAPS Trigger: ACTTGGTGCAGTACCGGAGCAACAGAGATCGAAGCT...TTGCCCTCTTTCCCTGCACAAGCCCTCCCATGCCCAGCCTAACACCTTTCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR GCA 90 bp | CTCGCTGACGTGGCAGAACCGTTCACTGTAGTCTGGCTGCAGACTCTCAGTCAGAGCTTCGATCTCTGTTaGTCCGGTACTGCACCAAGT | + |
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Preference number: 4 (lower is better) Translates to: LADVAEPFTVVWLQTLSQSFDLC*SGTAPS Trigger: ACTTGGTGCAGTACCGGAGCAACAGAGATCGAAGCT...CTGACTGAGAGTCTGCAGCCAGACTACAGTGAACGGTTCTGCCACGTCAGCGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135038.2 |
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| CDS-3UTR CCA 90 bp | GCCCCAAGGGAAGGCAGTGAGCATTGGATCCAGATTGCCAAGGTGAGTAGGGGAAGAACTTCCACAGATTaGGTTATAGCGGCTCCGAAC | + |
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Preference number: 4 (lower is better) Translates to: APREGSEHWIQIAKVSRGRTSTD*VIAAPN Trigger: GTTCGGAGCCGCTATAACCCAATCTGTGGAAGTTCT...TCCCCTACTCACCTTGGCAATCTGGATCCAATGCTCACTGCCTTCCCTTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR CCA 90 bp | GACTCTCTTCAAAGAAAGTGGAAAGGTGTTAGGCTGGGCATGGGAGGGCTTGTGCCCCAGTGGACAGGCTaGCTCCATTTACTCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: DSLQRKWKGVRLGMGGLVPQWTG*LHLLHC Trigger: ACAGTGGAGTAAATGGAGCCAGCCTGTCCACTGGGG...CACAAGCCCTCCCATGCCCAGCCTAACACCTTTCCACTTTCTTTGAAGAGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR TCA 90 bp | GGTGTTAGGCTGGGCATGGGAGGGCTTGTGCAGGGAAAGAGGGCAAGGGACACTTCATGTACTCTATGTTaGACACAAAGCACTGAACCT | + |
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Preference number: 4 (lower is better) Translates to: GVRLGMGGLVQGKRARDTSCTLC*TQSTEP Trigger: AGGTTCAGTGCTTTGTGTTCAACATAGAGTACATGA...AGTGTCCCTTGCCCTCTTTCCCTGCACAAGCCCTCCCATGCCCAGCCTAACACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR TCA 90 bp | AGGGAGGGAGAATCCTATAAAAGAGAAGGACCATGCTGGGTGTGGTGGTGCATGGTGAGGTTGGTTGCCTaGGGCTCAGAACTGCTATTC | + |
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Preference number: 4 (lower is better) Translates to: REGESYKREGPCWVWWCMVRLVA*GSELLF Trigger: GAATAGCAGTTCTGAGCCTCAGGCAACCAACCTCAC...CATGCACCACCACACCCAGCATGGTCCTTCTCTTTTATAGGATTCTCCCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR TCA 90 bp | GCCCCAAGGGAAGGCAGTGAGCATTGGATCCAGATTGCCAAGGTGAGTAGGGGACATTTACTCCACTGTTaGGAACTTCCACAGATTGGG | + |
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Preference number: 4 (lower is better) Translates to: APREGSEHWIQIAKVSRGHLLHC*ELPQIG Trigger: CCCAATCTGTGGAAGTTCTCAACAGTGGAGTAAATG...TCCCCTACTCACCTTGGCAATCTGGATCCAATGCTCACTGCCTTCCCTTGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR CCA 90 bp | AGTCAGCCCTTTAGACACACCACTCCAGGCCGAAAAGTTCCCTTGGTATTCAGTCCCCAGTGGACAGGCTaGCTCCATTTACTCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: SQPFRHTTPGRKVPLVFSPQWTG*LHLLHC Trigger: ACAGTGGAGTAAATGGAGCCAGCCTGTCCACTGGGG...ACTGAATACCAAGGGAACTTTTCGGCCTGGAGTGGTGTGTCTAAAGGGCTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135038.2 |
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| CDS-3UTR CCA 90 bp | GACTCTCTTCAAAGAAAGTGGAAAGGTGTTAGGCTGGGCATGGGAGGGCTTGTGCCGTTCACTGTAGTCTaGCTGCAGACTCTCAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: DSLQRKWKGVRLGMGGLVPFTVV*LQTLSQ Trigger: CTGACTGAGAGTCTGCAGCCAGACTACAGTGAACGG...CACAAGCCCTCCCATGCCCAGCCTAACACCTTTCCACTTTCTTTGAAGAGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR CCA 90 bp | GGAGAATCCTATAAAAGAGAAGGACCATGCTGGGTGTGGTGGTGCATGCCAGTAGGTTTCTGGGGGTCCTaGAGCTGGACAACAAATGTC | + |
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Preference number: 4 (lower is better) Translates to: GESYKREGPCWVWWCMPVGFWGS*SWTTNV Trigger: GACATTTGTTGTCCAGCTCCAGGACCCCCAGAAACC...TACTGGCATGCACCACCACACCCAGCATGGTCCTTCTCTTTTATAGGATTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR CCA 90 bp | AGTCAGCCCTTTAGACACACCACTCCAGGCCGAAAAGTTCCCTTGGTATTCAGTGGTTTCTGGGGGTCCTaGAGCTGGACAACAAATGTC | + |
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Preference number: 4 (lower is better) Translates to: SQPFRHTTPGRKVPLVFSGFWGS*SWTTNV Trigger: GACATTTGTTGTCCAGCTCCAGGACCCCCAGAAACC...ACTGAATACCAAGGGAACTTTTCGGCCTGGAGTGGTGTGTCTAAAGGGCTGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135038.2 |
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| CDS-3UTR TCA 90 bp | GCCCCAAGGGAAGGCAGTGAGCATTGGATCCAGATTGCCAAGGTGAGTAGGGGAATTCACTCAGATTGCTaGGTGTTAGATTTTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: APREGSEHWIQIAKVSRGIHSDC*VLDFLE Trigger: CTCCAGAAAATCTAACACTCAGCAATCTGAGTGAAT...TCCCCTACTCACCTTGGCAATCTGGATCCAATGCTCACTGCCTTCCCTTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR TCA 90 bp | GCCCCAAGGGAAGGCAGTGAGCATTGGATCCAGATTGCCAAGGTGAGTAGGGGAGAGAATCTAGGTTCATaGTTCACTATTAGTTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: APREGSEHWIQIAKVSRGENLGS*FTISSV Trigger: GACGGAACTAATAGTGAATCATGAACCTAGATTCTC...TCCCCTACTCACCTTGGCAATCTGGATCCAATGCTCACTGCCTTCCCTTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR TCA 90 bp | AATCTCGCTGACGTGGCAGAACCGTTCACTGTAGTCTGGCTGCAGACTCTCAGTCATTTACTCCACTGTTaGGAACTTCCACAGATTGGG | + |
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Preference number: 4 (lower is better) Translates to: NLADVAEPFTVVWLQTLSHLLHC*ELPQIG Trigger: CCCAATCTGTGGAAGTTCTCAACAGTGGAGTAAATG...ACTGAGAGTCTGCAGCCAGACTACAGTGAACGGTTCTGCCACGTCAGCGAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135038.2 |
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| CDS-3UTR GCA 90 bp | GGTGTTAGGCTGGGCATGGGAGGGCTTGTGCAGGGAAAGAGGGCAAGGGACACTAGAACAAATAGTGACTaGACTCCTGGAATGTATTAT | + |
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Preference number: 4 (lower is better) Translates to: GVRLGMGGLVQGKRARDTRTNSD*TPGMYY Trigger: ATAATACATTCCAGGAGTGCAGTCACTATTTGTTCT...AGTGTCCCTTGCCCTCTTTCCCTGCACAAGCCCTCCCATGCCCAGCCTAACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR CCA 90 bp | TCTCTTCAAAGAAAGTGGAAAGGTGTTAGGCTGGGCATGGGAGGGCTTGTGCAGCATCTCAGCTCTAGCTaGGATTCACTCAGATTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SLQRKWKGVRLGMGGLVQHLSSS*DSLRLL Trigger: CAGCAATCTGAGTGAATCCCAGCTAGAGCTGAGATG...CTGCACAAGCCCTCCCATGCCCAGCCTAACACCTTTCCACTTTCTTTGAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR GCA 90 bp | GACTCTCTTCAAAGAAAGTGGAAAGGTGTTAGGCTGGGCATGGGAGGGCTTGTGCCTGAGGCTCAGAACTaGTATTCCAAGTGCAATTCA | + |
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Preference number: 4 (lower is better) Translates to: DSLQRKWKGVRLGMGGLVPEAQN*YSKCNS Trigger: TGAATTGCACTTGGAATAGCAGTTCTGAGCCTCAGG...CACAAGCCCTCCCATGCCCAGCCTAACACCTTTCCACTTTCTTTGAAGAGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR CCA 90 bp | AGTCAGCCCTTTAGACACACCACTCCAGGCCGAAAAGTTCCCTTGGTATTCAGTCATCTCAGCTCTAGCTaGGATTCACTCAGATTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SQPFRHTTPGRKVPLVFSHLSSS*DSLRLL Trigger: CAGCAATCTGAGTGAATCCCAGCTAGAGCTGAGATG...ACTGAATACCAAGGGAACTTTTCGGCCTGGAGTGGTGTGTCTAAAGGGCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135038.2 |
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| CDS-3UTR TCA 90 bp | AATCTCGCTGACGTGGCAGAACCGTTCACTGTAGTCTGGCTGCAGACTCTCAGTATTCACTCAGATTGCTaGGTGTTAGATTTTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: NLADVAEPFTVVWLQTLSIHSDC*VLDFLE Trigger: CTCCAGAAAATCTAACACTCAGCAATCTGAGTGAAT...ACTGAGAGTCTGCAGCCAGACTACAGTGAACGGTTCTGCCACGTCAGCGAGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135038.2 |
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| CDS-3UTR CCA 90 bp | TTAGACACACCACTCCAGGCCGAAAAGTTCCCTTGGTATTCAGTAACCAGATCCAGAACTTCCACAGATTaGGTTATAGCGGCTCCGAAC | + |
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Preference number: 4 (lower is better) Translates to: LDTPLQAEKFPWYSVTRSRTSTD*VIAAPN Trigger: GTTCGGAGCCGCTATAACCCAATCTGTGGAAGTTCT...GGATCTGGTTACTGAATACCAAGGGAACTTTTCGGCCTGGAGTGGTGTGTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135038.2 |
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| CDS-3UTR CCA 90 bp | GGAGAATCCTATAAAAGAGAAGGACCATGCTGGGTGTGGTGGTGCATGCCAGTAGCCGAAAAGTTCCCTTaGTATTCAGTAACCAGATCC | + |
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Preference number: 4 (lower is better) Translates to: GESYKREGPCWVWWCMPVAEKFP*YSVTRS Trigger: GGATCTGGTTACTGAATACCAAGGGAACTTTTCGGC...TACTGGCATGCACCACCACACCCAGCATGGTCCTTCTCTTTTATAGGATTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR GCA 90 bp | GACTCTCTTCAAAGAAAGTGGAAAGGTGTTAGGCTGGGCATGGGAGGGCTTGTGAACTGCTATTCCAAGTaGAATTCATGTACTCTATGT | + |
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Preference number: 4 (lower is better) Translates to: DSLQRKWKGVRLGMGGLVNCYSK*NSCTLC Trigger: ACATAGAGTACATGAATTGCACTTGGAATAGCAGTT...CACAAGCCCTCCCATGCCCAGCCTAACACCTTTCCACTTTCTTTGAAGAGAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR CAA 90 bp | AAAGGTGTTAGGCTGGGCATGGGAGGGCTTGTGCAGGGAAAGAGGGCAAGGGACCTGGACATGAGGACCTaGGAGCTCCACCCTGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: KGVRLGMGGLVQGKRARDLDMRT*ELHPAL Trigger: GAGGGCAGGGTGGAGCTCCAAGGTCCTCATGTCCAG...GTCCCTTGCCCTCTTTCCCTGCACAAGCCCTCCCATGCCCAGCCTAACACCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR CAA 90 bp | CTCGCTGACGTGGCAGAACCGTTCACTGTAGTCTGGCTGCAGACTCTCAGTCAGCCATTTACTCCACTGTaGAGAACTTCCACAGATTGG | + |
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Preference number: 5 (lower is better) Translates to: LADVAEPFTVVWLQTLSQPFTPL*RTSTDW Trigger: CCAATCTGTGGAAGTTCTCAACAGTGGAGTAAATGG...CTGACTGAGAGTCTGCAGCCAGACTACAGTGAACGGTTCTGCCACGTCAGCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135038.2 |
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| CDS-3UTR CAA 90 bp | AGTGGAAAGGTGTTAGGCTGGGCATGGGAGGGCTTGTGCAGGGAAAGAGGGCAACTGGATATCTTCTTTTaGTATCTGACAGCCAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: SGKVLGWAWEGLCRERGQLDIFF*YLTARS Trigger: ACTTCTGGCTGTCAGATACAAAAAGAAGATATCCAG...TTGCCCTCTTTCCCTGCACAAGCCCTCCCATGCCCAGCCTAACACCTTTCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR CAA 90 bp | GCCCCAAGGGAAGGCAGTGAGCATTGGATCCAGATTGCCAAGGTGAGTAGGGGATGGGATTCACTCAGATaGCTGAGTGTTAGATTTTCT | + |
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Preference number: 5 (lower is better) Translates to: APREGSEHWIQIAKVSRGWDSLR*LSVRFS Trigger: AGAAAATCTAACACTCAGCAATCTGAGTGAATCCCA...TCCCCTACTCACCTTGGCAATCTGGATCCAATGCTCACTGCCTTCCCTTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS GCA 90 bp | AATAATCAACCCCATGGTGCCAACAGGGATAAGCACAGCTTCCAGTaGAAACAAGGAAGGATTCTCCTCTACAGTATGACTCCCCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: NNQPHGANRDKHSFQ*KQGRILLYSMTPPV Trigger: CACTGGGGGAGTCATACTGTAGAGGAGAATCCTTCCTTGTTTGCACTGGAAGCTGTGCTTATCCCTGTTGGCACCATGGGGTTGATTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR CAA 90 bp | TCTCTTCAAAGAAAGTGGAAAGGTGTTAGGCTGGGCATGGGAGGGCTTGTGCAGCCATTTACTCCACTGTaGAGAACTTCCACAGATTGG | + |
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Preference number: 5 (lower is better) Translates to: SLQRKWKGVRLGMGGLVQPFTPL*RTSTDW Trigger: CCAATCTGTGGAAGTTCTCAACAGTGGAGTAAATGG...CTGCACAAGCCCTCCCATGCCCAGCCTAACACCTTTCCACTTTCTTTGAAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS-3UTR CAA 90 bp | CAGACTCTCAGTCAGCCCTTTAGACACACCACTCCAGGCCGAAAAGTTCCCTTGCTGGATATCTTCTTTTaGTATCTGACAGCCAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: QTLSQPFRHTTPGRKVPLLDIFF*YLTARS Trigger: ACTTCTGGCTGTCAGATACAAAAAGAAGATATCCAG...CAAGGGAACTTTTCGGCCTGGAGTGGTGTGTCTAAAGGGCTGACTGAGAGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135038.2 |
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| CDS TCA 90 bp | GTCTGCTTTTCCATCTCAGCTCTAGCTGGGATTCACTCAGATTGCTaGGTGTTAGATTTTCTGGAGCCCGTGGGATCACAAGATTCTGTA | + |
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Preference number: 5 (lower is better) Translates to: VCFSISALAGIHSDC*VLDFLEPVGSQDSV Trigger: TACAGAATCTTGTGATCCCACGGGCTCCAGAAAATCTAACACTCAGCAATCTGAGTGAATCCCAGCTAGAGCTGAGATGGAAAAGCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033664.14 ENSMUST00000135038.2 |
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| CDS-3UTR CAA 90 bp | ACTCTCAGTCAGCCCTTTAGACACACCACTCCAGGCCGAAAAGTTCCCTTGGTATGGGATTCACTCAGATaGCTGAGTGTTAGATTTTCT | + |
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Preference number: 5 (lower is better) Translates to: TLSQPFRHTTPGRKVPLVWDSLR*LSVRFS Trigger: AGAAAATCTAACACTCAGCAATCTGAGTGAATCCCA...TACCAAGGGAACTTTTCGGCCTGGAGTGGTGTGTCTAAAGGGCTGACTGAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135038.2 |
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| CDS TCA 90 bp | CCTGGAATGTATTATTATCAGATACCTTGTACCTATAGTGCAGCGTaGGGTTGGTTGCCTGAGGCTCAGAACTGCTATTCCAAGTGCAAT | + |
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Preference number: 5 (lower is better) Translates to: PGMYYYQIPCTYSAA*GWLPEAQNCYSKCN Trigger: ATTGCACTTGGAATAGCAGTTCTGAGCCTCAGGCAACCAACCTCACGCTGCACTATAGGTACAAGGTATCTGATAATAATACATTCCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS GCA 90 bp | ATTATTATCAGATACCTTGTACCTATAGTGCAGCGTGAGGTTGGTTaGCTGAGGCTCAGAACTGCTATTCCAAGTGCAATTCATGTACTC | + |
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Preference number: 5 (lower is better) Translates to: IIIRYLVPIVQREVG*LRLRTAIPSAIHVL Trigger: GAGTACATGAATTGCACTTGGAATAGCAGTTCTGAGCCTCAGGCAACCAACCTCACGCTGCACTATAGGTACAAGGTATCTGATAATAAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS CCA 90 bp | AAACAGCGTTCTTTAATATGTCTGCTTTTCCATCTCAGCTCTAGCTaGGATTCACTCAGATTGCTGAGTGTTAGATTTTCTGGAGCCCGT | + |
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Preference number: 5 (lower is better) Translates to: KQRSLICLLFHLSSS*DSLRLLSVRFSGAR Trigger: ACGGGCTCCAGAAAATCTAACACTCAGCAATCTGAGTGAATCCCAGCTAGAGCTGAGATGGAAAAGCAGACATATTAAAGAACGCTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033664.14 ENSMUST00000135038.2 |
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| CDS GCA 90 bp | TTCACTATTAGTTCCGTCCAGCTTCGATCTCTGTTGCTCCGGTACTaGACCAAGTATTGTAAACAGCGTTCTTTAATATGTCTGCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: FTISSVQLRSLLLRY*TKYCKQRSLICLLF Trigger: GAAAAGCAGACATATTAAAGAACGCTGTTTACAATACTTGGTGCAGTACCGGAGCAACAGAGATCGAAGCTGGACGGAACTAATAGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033664.14 ENSMUST00000135038.2 |
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| CDS GCA 72 bp | AATAACATGGGGGAGGCCAGTAAGGGCTATGCAGGCTaGAAGGAGAACCTCCAGGCCCCTCTCCTAGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: NNMGEASKGYAG*KENLQAPLLGP Trigger: GGGCCCTAGGAGAGGGGCCTGGAGGTTCTCCTTGCAGCCTGCATAGCCCTTACTGGCCTCCCCCATGTTATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS CAA 72 bp | CCCCCAGTGGACAGGCTGGCTCCATTTACTCCACTGTaGAGAACTTCCACAGATTGGGTTATAGCGGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: PPVDRLAPFTPL*RTSTDWVIAAP Trigger: CGGAGCCGCTATAACCCAATCTGTGGAAGTTCTCAACAGTGGAGTAAATGGAGCCAGCCTGTCCACTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033664.14 ENSMUST00000135038.2 |
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| CDS CAA 90 bp | AGTATGACTCCCCCAGTGGACAGGCTGGCTCCATTTACTCCACTGTaGAGAACTTCCACAGATTGGGTTATAGCGGCTCCGAACCCGAAA | + |
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Preference number: 6 (lower is better) Translates to: SMTPPVDRLAPFTPL*RTSTDWVIAAPNPK Trigger: TTTCGGGTTCGGAGCCGCTATAACCCAATCTGTGGAAGTTCTCAACAGTGGAGTAAATGGAGCCAGCCTGTCCACTGGGGGAGTCATACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033664.14 ENSMUST00000135038.2 |
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| CDS CAA 90 bp | GCACTGAGGTGTTCAGGGGCTGTAGAAGTCAGGATCAAATCAGCTTaGATGTCTTCATTCGCACTGGACATGAGGACCTTGGAGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: ALRCSGAVEVRIKSA*MSSFALDMRTLELH Trigger: GTGGAGCTCCAAGGTCCTCATGTCCAGTGCGAATGAAGACATCAAAGCTGATTTGATCCTGACTTCTACAGCCCCTGAACACCTCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS TCA 72 bp | ACCTTGGAGCTCCACCCTGCCCTCAGCAGGAGCAGCTaGAGGACTAAGAAGGATCTAGGTGACAATAATAGT | + |
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Preference number: 6 (lower is better) Translates to: TLELHPALSRSS*RTKKDLGDNNS Trigger: ACTATTATTGTCACCTAGATCCTTCTTAGTCCTTCAGCTGCTCCTGCTGAGGGCAGGGTGGAGCTCCAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS TCA 72 bp | TCCATCTCAGCTCTAGCTGGGATTCACTCAGATTGCTaGGTGTTAGATTTTCTGGAGCCCGTGGGATCACAA | + |
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Preference number: 6 (lower is better) Translates to: SISALAGIHSDC*VLDFLEPVGSQ Trigger: TTGTGATCCCACGGGCTCCAGAAAATCTAACACTCAGCAATCTGAGTGAATCCCAGCTAGAGCTGAGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033664.14 ENSMUST00000135038.2 |
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| CDS CAA 72 bp | CTTTTCCATCTCAGCTCTAGCTGGGATTCACTCAGATaGCTGAGTGTTAGATTTTCTGGAGCCCGTGGGATC | + |
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Preference number: 6 (lower is better) Translates to: LFHLSSSWDSLR*LSVRFSGARGI Trigger: GATCCCACGGGCTCCAGAAAATCTAACACTCAGCAATCTGAGTGAATCCCAGCTAGAGCTGAGATGGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033664.14 ENSMUST00000135038.2 |
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| CDS GCA 72 bp | AGATACCTTGTACCTATAGTGCAGCGTGAGGTTGGTTaGCTGAGGCTCAGAACTGCTATTCCAAGTGCAATT | + |
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Preference number: 6 (lower is better) Translates to: RYLVPIVQREVG*LRLRTAIPSAI Trigger: AATTGCACTTGGAATAGCAGTTCTGAGCCTCAGGCAACCAACCTCACGCTGCACTATAGGTACAAGGTATCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS CAA 90 bp | ATATGTCTGCTTTTCCATCTCAGCTCTAGCTGGGATTCACTCAGATaGCTGAGTGTTAGATTTTCTGGAGCCCGTGGGATCACAAGATTC | + |
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Preference number: 6 (lower is better) Translates to: ICLLFHLSSSWDSLR*LSVRFSGARGITRF Trigger: GAATCTTGTGATCCCACGGGCTCCAGAAAATCTAACACTCAGCAATCTGAGTGAATCCCAGCTAGAGCTGAGATGGAAAAGCAGACATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033664.14 ENSMUST00000135038.2 |
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| CDS GCA 72 bp | GATTCACTATTAGTTCCGTCCAGCTTCGATCTCTGTTaGTCCGGTACTGCACCAAGTATTGTAAACAGCGTT | + |
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Preference number: 6 (lower is better) Translates to: DSLLVPSSFDLC*SGTAPSIVNSV Trigger: AACGCTGTTTACAATACTTGGTGCAGTACCGGAGCAACAGAGATCGAAGCTGGACGGAACTAATAGTGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033664.14 ENSMUST00000135038.2 |
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| CDS TCA 72 bp | AACTGCTATTCCAAGTGCAATTCATGTACTCTATGTTaGACACAAAGCACTGAACCTCTGGAAGGGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: NCYSKCNSCTLC*TQSTEPLEGAE Trigger: CTCTGCCCCTTCCAGAGGTTCAGTGCTTTGTGTTCAACATAGAGTACATGAATTGCACTTGGAATAGCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS TCA 72 bp | TATTATTATCAGATACCTTGTACCTATAGTGCAGCGTaGGGTTGGTTGCCTGAGGCTCAGAACTGCTATTCC | + |
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Preference number: 6 (lower is better) Translates to: YYYQIPCTYSAA*GWLPEAQNCYS Trigger: GGAATAGCAGTTCTGAGCCTCAGGCAACCAACCTCACGCTGCACTATAGGTACAAGGTATCTGATAATAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS CAA 90 bp | CTGGAGCTGGACAACAAATGTCTGGTAGAGCTGGATATCTTCTTTTaGTATCTGACAGCCAGAAGTAATCTCTTTGGAGAACAAATAGTG | + |
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Preference number: 6 (lower is better) Translates to: LELDNKCLVELDIFF*YLTARSNLFGEQIV Trigger: CACTATTTGTTCTCCAAAGAGATTACTTCTGGCTGTCAGATACAAAAAGAAGATATCCAGCTCTACCAGACATTTGTTGTCCAGCTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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| CDS CCA 72 bp | TCTTTAATATGTCTGCTTTTCCATCTCAGCTCTAGCTaGGATTCACTCAGATTGCTGAGTGTTAGATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SLICLLFHLSSS*DSLRLLSVRFS Trigger: AGAAAATCTAACACTCAGCAATCTGAGTGAATCCCAGCTAGAGCTGAGATGGAAAAGCAGACATATTAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033664.14 ENSMUST00000135038.2 |
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| CDS CAA 72 bp | GACAACAAATGTCTGGTAGAGCTGGATATCTTCTTTTaGTATCTGACAGCCAGAAGTAATCTCTTTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: DNKCLVELDIFF*YLTARSNLFGE Trigger: TTCTCCAAAGAGATTACTTCTGGCTGTCAGATACAAAAAGAAGATATCCAGCTCTACCAGACATTTGTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033664.14 |
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