Pregenerated sensors for IL2RB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068227Ensembl transcript IDs: ENSMUST00000089398.9, ENSMUST00000163494.3
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCAGGCAGCATCCGGTGGCAGGAGGGGATGGGCAGGAGAACCCTTaGATGGGTTCTGAATCCCGTCTGCACTGGCTCATCTCCTCTTGC | + |
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Preference number: 1 (lower is better) Translates to: GRQHPVAGGDGQENP*MGSESRLHWLISSC Trigger: GCAAGAGGAGATGAGCCAGTGCAGACGGGATTCAGAACCCATGCAAGGGTTCTCCTGCCCATCCCCTCCTGCCACCGGATGCTGCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR TCA 90 bp | CTGGGCTGTTGGGACTCGGGGCTCAGGTTCCAGTGGACTCCTTCATaGGTTGGTGAGGCAGCCGTGGAAAGATCCAACAGCCACTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: LGCWDSGLRFQWTPS*VGEAAVERSNSHCW Trigger: CCAGCAGTGGCTGTTGGATCTTTCCACGGCTGCCTCACCAACTCATGAAGGAGTCCACTGGAACCTGAGCCCCGAGTCCCAACAGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR CCA 90 bp | GGCAGCATCCGGTGGCAGGAGGGGATGGGCAGGAGAACCCTTGCATaGGTTCTGAATCCCGTCTGCACTGGCTCATCTCCTCTTGCTAAC | + |
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Preference number: 1 (lower is better) Translates to: GSIRWQEGMGRRTLA*VLNPVCTGSSPLAN Trigger: GTTAGCAAGAGGAGATGAGCCAGTGCAGACGGGATTCAGAACCCATGCAAGGGTTCTCCTGCCCATCCCCTCCTGCCACCGGATGCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR TCA 90 bp | TCCGGTGGCAGGAGGGGATGGGCAGGAGAACCCTTGCATGGGTTCTaGATCCCGTCTGCACTGGCTCATCTCCTCTTGCTAACAATGGGC | + |
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Preference number: 1 (lower is better) Translates to: SGGRRGWAGEPLHGF*IPSALAHLLLLTMG Trigger: GCCCATTGTTAGCAAGAGGAGATGAGCCAGTGCAGACGGGATTCAGAACCCATGCAAGGGTTCTCCTGCCCATCCCCTCCTGCCACCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR CCA 90 bp | CAGCCCTTCTGCGCCAAGGCACTTCCTAAGTTGCTAGTCAGCCAGTaGTCCTGTAGTCTGGCAGGACAGCCAGTGAGCAGTGTGCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: QPFCAKALPKLLVSQ*SCSLAGQPVSSVQD Trigger: GTCCTGCACACTGCTCACTGGCTGTCCTGCCAGACTACAGGACCACTGGCTGACTAGCAACTTAGGAAGTGCCTTGGCGCAGAAGGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR TCA 90 bp | TTGCCCAGGATACACAGTGAAGAACGTGAATGCAGAGCTCAGGTCTaGCTCATTGCTGAGTTAGAGGAGGCTGGTGGCAGGCAGCATCCG | + |
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Preference number: 1 (lower is better) Translates to: LPRIHSEERECRAQV*LIAELEEAGGRQHP Trigger: CGGATGCTGCCTGCCACCAGCCTCCTCTAACTCAGCAATGAGTCAGACCTGAGCTCTGCATTCACGTTCTTCACTGTGTATCCTGGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR TCA 90 bp | GGAAAGATCCAACAGCCACTGCTGGGTAGGTATTGGTGTCCAAACTaGGTCTATCACAGGGAGGTCAGGAGACAGCCCGGGATAAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: GKIQQPLLGRYWCPN*VYHREVRRQPGIRK Trigger: CTTCCTTATCCCGGGCTGTCTCCTGACCTCCCTGTGATAGACTCAGTTTGGACACCAATACCTACCCAGCAGTGGCTGTTGGATCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGACAGCTGTTCCACAGCCGTGCTGGCAGGGCAAGAGTTGAGACAGGAAATGCCTGATCCAGGCAGCTaGATCCCAGTCCTGGCCACC | + |
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Preference number: 2 (lower is better) Translates to: EDSCSTAVLAGQELRQEMPDPGS*IPVLAT Trigger: GGTGGCCAGGACTGGGATCCAGCTGCCTGGATCAGG...CATTTCCTGTCTCAACTCTTGCCCTGCCAGCACGGCTGTGGAACAGCTGTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR-3UTR CCA 90 bp | AGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCCTGATCCAGGCAGCTaGATCCCAGTCCTGGCCACC | + |
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Preference number: 2 (lower is better) Translates to: RTVLSSGLSSRDLLSSLPPDPGS*IPVLAT Trigger: GGTGGCCAGGACTGGGATCCAGCTGCCTGGATCAGG...AGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| 3UTR-3UTR TCA 90 bp | ATTGAAAGAGAACTGAATCCTTCTCAGACCTTTTCAGCTGTGGAAATAAGTTGTTGGCAGGGCAAGAGTTaGGACAGGAAATGGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: IERELNPSQTFSAVEISCWQGKS*DRKWGR Trigger: TCTGCCCCATTTCCTGTCTCAACTCTTGCCCTGCCA...ACAACTTATTTCCACAGCTGAAAAGGTCTGAGAAGGATTCAGTTCTCTTTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR-3UTR GCA 90 bp | ATTGAAAGAGAACTGAATCCTTCTCAGACCTTTTCAGCTGTGGAAATAAGTTGTGAGCACAATGAACAGTaGCTGCAAAGGAGGGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: IERELNPSQTFSAVEISCEHNEQ*LQRRGL Trigger: CAACCCCCTCCTTTGCAGGCACTGTTCATTGTGCTC...ACAACTTATTTCCACAGCTGAAAAGGTCTGAGAAGGATTCAGTTCTCTTTCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR-3UTR CCA 90 bp | ATTGAAAGAGAACTGAATCCTTCTCAGACCTTTTCAGCTGTGGAAATAAGTTGTTCTGTGCTAATGGAGTaGTCTGTAGAGAGCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: IERELNPSQTFSAVEISCSVLME*SVESSA Trigger: AGCACTGCTCTCTACAGACCACTCCATTAGCACAGA...ACAACTTATTTCCACAGCTGAAAAGGTCTGAGAAGGATTCAGTTCTCTTTCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR GCA 72 bp | GTGCTCTCCTCTGAGGGTGAGGTGGTACACTTAGCATaGCTGGGCTGTTGGGACTCGGGGCTCAGGTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: VLSSEGEVVHLA*LGCWDSGLRFQ Trigger: CTGGAACCTGAGCCCCGAGTCCCAACAGCCCAGGCATGCTAAGTGTACCACCTCACCCTCAGAGGAGAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR CCA 72 bp | CGGTGGCAGGAGGGGATGGGCAGGAGAACCCTTGCATaGGTTCTGAATCCCGTCTGCACTGGCTCATCTCCT | + |
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Preference number: 3 (lower is better) Translates to: RWQEGMGRRTLA*VLNPVCTGSSP Trigger: AGGAGATGAGCCAGTGCAGACGGGATTCAGAACCCATGCAAGGGTTCTCCTGCCCATCCCCTCCTGCCACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR CCA 72 bp | GAGGGTGAGGTGGTACACTTAGCATGCCTGGGCTGTTaGGACTCGGGGCTCAGGTTCCAGTGGACTCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: EGEVVHLACLGC*DSGLRFQWTPS Trigger: TGAAGGAGTCCACTGGAACCTGAGCCCCGAGTCCCAACAGCCCAGGCATGCTAAGTGTACCACCTCACCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR TCA 72 bp | GGGGCTCAGGTTCCAGTGGACTCCTTCATGAGTTGGTaGGGCAGCCGTGGAAAGATCCAACAGCCACTGCTG | + |
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Preference number: 3 (lower is better) Translates to: GAQVPVDSFMSW*GSRGKIQQPLL Trigger: CAGCAGTGGCTGTTGGATCTTTCCACGGCTGCCTCACCAACTCATGAAGGAGTCCACTGGAACCTGAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR TCA 72 bp | TGGGACTCGGGGCTCAGGTTCCAGTGGACTCCTTCATaGGTTGGTGAGGCAGCCGTGGAAAGATCCAACAGC | + |
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Preference number: 3 (lower is better) Translates to: WDSGLRFQWTPS*VGEAAVERSNS Trigger: GCTGTTGGATCTTTCCACGGCTGCCTCACCAACTCATGAAGGAGTCCACTGGAACCTGAGCCCCGAGTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR TCA 72 bp | AAGAGACCTCTTAAGCAGTCTTCCTCAAGCCTGACCTaGTCCAGGCAGCTGGATCCCAGTCCTGGCCACCTG | + |
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Preference number: 3 (lower is better) Translates to: KRPLKQSSSSLT*SRQLDPSPGHL Trigger: CAGGTGGCCAGGACTGGGATCCAGCTGCCTGGATCAGGTCAGGCTTGAGGAAGACTGCTTAAGAGGTCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| 3UTR TCA 72 bp | AGGGAAGGAGGCAGGTACAGGAAGCTAGTGACCTCATaGCTAAATAGGGCAGTGGAGCTGACCACCGCTCCC | + |
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Preference number: 3 (lower is better) Translates to: REGGRYRKLVTS*LNRAVELTTAP Trigger: GGGAGCGGTGGTCAGCTCCACTGCCCTATTTAGTCATGAGGTCACTAGCTTCCTGTACCTGCCTCCTTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR TCA 72 bp | CAACAGCCACTGCTGGGTAGGTATTGGTGTCCAAACTaGGTCTATCACAGGGAGGTCAGGAGACAGCCCGGG | + |
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Preference number: 3 (lower is better) Translates to: QQPLLGRYWCPN*VYHREVRRQPG Trigger: CCCGGGCTGTCTCCTGACCTCCCTGTGATAGACTCAGTTTGGACACCAATACCTACCCAGCAGTGGCTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR GCA 72 bp | TGCACTGGCTCATCTCCTCTTGCTAACAATGGGCCTTaGCCCAAGCACCTGTTCCCAGGACATCTGGTTGAG | + |
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Preference number: 3 (lower is better) Translates to: CTGSSPLANNGP*PKHLFPGHLVE Trigger: CTCAACCAGATGTCCTGGGAACAGGTGCTTGGGGCAAGGCCCATTGTTAGCAAGAGGAGATGAGCCAGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR GCA 72 bp | GGCAGGAGAACCCTTGCATGGGTTCTGAATCCCGTCTaGACTGGCTCATCTCCTCTTGCTAACAATGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: GRRTLAWVLNPV*TGSSPLANNGP Trigger: AGGCCCATTGTTAGCAAGAGGAGATGAGCCAGTGCAGACGGGATTCAGAACCCATGCAAGGGTTCTCCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR GCA 72 bp | AAGGTTATGTTTGTATTGGGGGAAGCAAGTTCTAGCTaGCCTGTGAAGGCAAGCAGGAGGGAAGGAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: KVMFVLGEASSS*PVKASRREGGR Trigger: CCTGCCTCCTTCCCTCCTGCTTGCCTTCACAGGGCAGCTAGAACTTGCTTCCCCCAATACAAACATAACCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR GCA 72 bp | GTTGGTGAGGCAGCCGTGGAAAGATCCAACAGCCACTaGTGGGTAGGTATTGGTGTCCAAACTGAGTCTATC | + |
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Preference number: 3 (lower is better) Translates to: VGEAAVERSNSH*WVGIGVQTESI Trigger: GATAGACTCAGTTTGGACACCAATACCTACCCAGCAGTGGCTGTTGGATCTTTCCACGGCTGCCTCACCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR CCA 72 bp | GGTGAGGCAGCCGTGGAAAGATCCAACAGCCACTGCTaGGTAGGTATTGGTGTCCAAACTGAGTCTATCACA | + |
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Preference number: 3 (lower is better) Translates to: GEAAVERSNSHC*VGIGVQTESIT Trigger: TGTGATAGACTCAGTTTGGACACCAATACCTACCCAGCAGTGGCTGTTGGATCTTTCCACGGCTGCCTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR TCA 72 bp | ATACACAGTGAAGAACGTGAATGCAGAGCTCAGGTCTaGCTCATTGCTGAGTTAGAGGAGGCTGGTGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: IHSEERECRAQV*LIAELEEAGGR Trigger: CCTGCCACCAGCCTCCTCTAACTCAGCAATGAGTCAGACCTGAGCTCTGCATTCACGTTCTTCACTGTGTAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR-3UTR CAA 90 bp | GAGGTCAGGAGACAGCCCGGGATAAGGAAGATGGGTCAAGTGCTATCCCCTTCAGTGCTGACACAATGTTaGTGGTGTAAGCTTTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: EVRRQPGIRKMGQVLSPSVLTQC*WCKLFL Trigger: TAAGAAAAGCTTACACCACAAACATTGTGTCAGCAC...TGAAGGGGATAGCACTTGACCCATCTTCCTTATCCCGGGCTGTCTCCTGACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR GCA 72 bp | GAACCGAGGCAAGAAAATCCTGAAGGTTTGTCCATTTaGCCAGGATACACAGTGAAGAACGTGAATGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: EPRQENPEGLSI*PGYTVKNVNAE Trigger: CTCTGCATTCACGTTCTTCACTGTGTATCCTGGGCAAATGGACAAACCTTCAGGATTTTCTTGCCTCGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR CCA 72 bp | ACAGGCTGCATTCAGTCTTATCAGGACCTCTTCGTTTaGGTTGTCAAAGCTGCTCTGATTTTAAGACAGTGT | + |
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Preference number: 3 (lower is better) Translates to: TGCIQSYQDLFV*VVKAALILRQC Trigger: ACACTGTCTTAAAATCAGAGCAGCTTTGACAACCCAAACGAAGAGGTCCTGATAAGACTGAATGCAGCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR CCA 72 bp | ACCTTTTCAGCTGTGGAAATAAGTTGTATTCCTATTTaGGAACCGAGGCAAGAAAATCCTGAAGGTTTGTCC | + |
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Preference number: 3 (lower is better) Translates to: TFSAVEISCIPI*EPRQENPEGLS Trigger: GGACAAACCTTCAGGATTTTCTTGCCTCGGTTCCCAAATAGGAATACAACTTATTTCCACAGCTGAAAAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR-3UTR CAA 90 bp | ATTGAAAGAGAACTGAATCCTTCTCAGACCTTTTCAGCTGTGGAAATAAGTTGTGGAGCAAGGTTATGTTaGTATTGGGGGAAGCAAGTT | + |
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Preference number: 3 (lower is better) Translates to: IERELNPSQTFSAVEISCGARLC*YWGKQV Trigger: AACTTGCTTCCCCCAATACAAACATAACCTTGCTCC...ACAACTTATTTCCACAGCTGAAAAGGTCTGAGAAGGATTCAGTTCTCTTTCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR TCA 72 bp | CAGGAAATAATTGCAAAAATGCCATGCACAGATCATTaGAAGAGAACTGAATCCTTCTCAGACCTTTTCAGC | + |
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Preference number: 3 (lower is better) Translates to: QEIIAKMPCTDH*KRTESFSDLFS Trigger: GCTGAAAAGGTCTGAGAAGGATTCAGTTCTCTTTCAATGATCTGTGCATGGCATTTTTGCAATTATTTCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| CDS-3UTR CCA 90 bp | GTCTTCCTCAAGCCTGACCTGATCCAGGCAGCTGGATCCCAGTCCTGGCCACCTCAGCTGGCCTGTGAGTaGCCGCTGGGCGAGGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: VFLKPDLIQAAGSQSWPPQLACE*PLGEGK Trigger: TTTACCCTCGCCCAGCGGCCACTCACAGGCCAGCTG...AGGTGGCCAGGACTGGGATCCAGCTGCCTGGATCAGGTCAGGCTTGAGGAAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR TCA 90 bp | GCAGTCTTCCTCAAGCCTGACCTGATCCAGGCAGCTGGATCCCAGTCCTGGCCAAGAACTTGGAGGGAATaGGGGGCCACCAGGCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: AVFLKPDLIQAAGSQSWPRTWRE*GATRRR Trigger: CCTTCGCCTGGTGGCCCCTCATTCCCTCCAAGTTCT...TGGCCAGGACTGGGATCCAGCTGCCTGGATCAGGTCAGGCTTGAGGAAGACTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR TCA 90 bp | GTCTTCCTCAAGCCTGACCTGATCCAGGCAGCTGGATCCCAGTCCTGGCCACCTAGTAGCCCTGGTTGGTaGAGCAGCTGGCCTGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: VFLKPDLIQAAGSQSWPPSSPGW*SSWPVS Trigger: ACTCACAGGCCAGCTGCTTCACCAACCAGGGCTACT...AGGTGGCCAGGACTGGGATCCAGCTGCCTGGATCAGGTCAGGCTTGAGGAAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CCA 90 bp | AGGGAGGTCAGGAGACAGCCCGGGATAAGGAAGATGGGTCAAGTGCTATCCCCTCGAAAGGTCAGGGGCTaGCTCCAGGGACTCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: REVRRQPGIRKMGQVLSPRKVRG*LQGLQV Trigger: GACCTGGAGTCCCTGGAGCCAGCCCCTGACCTTTCG...AGGGGATAGCACTTGACCCATCTTCCTTATCCCGGGCTGTCTCCTGACCTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| CDS-3UTR CCA 90 bp | GCCAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTGGCAGCAGAGGTGGGTaGGGAGATCCCTCGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ARTVLSSGLSSRDLLSSLGSRGG*GDPSGS Trigger: GCTGCCCGAGGGATCTCCCCACCCACCTCTGCTGCC...AAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR TCA 90 bp | CCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCAAGCCTGTCCCTCGGGCAGCCTTaGCCCATCCTCCTCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: PQQWTVLKRPLKQSSSSLSLGQP*PILLHL Trigger: GAGGTGGAGGAGGATGGGTCAAGGCTGCCCGAGGGA...CAGGCTTGAGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR GCA 90 bp | GAGGACAGCTGTTCCACAGCCGTGCTGGCAGGGCAAGAGTTGAGACAGGAAATGCTTCAGGGGCTCTGCTaGCCCCATAGGCAGTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: EDSCSTAVLAGQELRQEMLQGLC*PHRQCW Trigger: CCAACACTGCCTATGGGGGCAGCAGAGCCCCTGAAG...CATTTCCTGTCTCAACTCTTGCCCTGCCAGCACGGCTGTGGAACAGCTGTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| CDS-3UTR CCA 90 bp | AGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTGGCAGCAGAGGTGGGTaGGGAGATCCCTCGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RTVLSSGLSSRDLLSSLPGSRGG*GDPSGS Trigger: GCTGCCCGAGGGATCTCCCCACCCACCTCTGCTGCC...AGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CCA 90 bp | CCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCAAGCCTGCAGAGGCAGCAGAGGTaGGTGGGGAGATCCCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: PQQWTVLKRPLKQSSSSLQRQQR*VGRSLG Trigger: CCCGAGGGATCTCCCCACCCACCTCTGCTGCCTCTG...CAGGCTTGAGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CCA 90 bp | CAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCCAGAGGCAGCAGAGGTaGGTGGGGAGATCCCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: QDSPQQWTVLKRPLKQSSQRQQR*VGRSLG Trigger: CCCGAGGGATCTCCCCACCCACCTCTGCTGCCTCTG...GGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CCA 90 bp | AGGGAGGTCAGGAGACAGCCCGGGATAAGGAAGATGGGTCAAGTGCTATCCCCTGCAGCAGGTCATCCCTaGGCGGGAAGGCACAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: REVRRQPGIRKMGQVLSPAAGHP*AGRHSS Trigger: ACTACTGTGCCTTCCCGCCCAGGGATGACCTGCTGC...AGGGGATAGCACTTGACCCATCTTCCTTATCCCGGGCTGTCTCCTGACCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| CDS-3UTR CCA 90 bp | GAGGTCAGGAGACAGCCCGGGATAAGGAAGATGGGTCAAGTGCTATCCCCTTCAGCATCCTCCCAGCTGTaGCCCAGAAGACGTCTACGG | + |
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Preference number: 4 (lower is better) Translates to: EVRRQPGIRKMGQVLSPSASSQL*PRRRLR Trigger: CCGTAGACGTCTTCTGGGCCACAGCTGGGAGGATGC...TGAAGGGGATAGCACTTGACCCATCTTCCTTATCCCGGGCTGTCTCCTGACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| CDS-3UTR CCA 90 bp | GATAGCCAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGCGAAAGGTCAGGGGCTaGCTCCAGGGACTCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: DSQDSPQQWTVLKRPLKQRKVRG*LQGLQV Trigger: GACCTGGAGTCCCTGGAGCCAGCCCCTGACCTTTCG...CTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTGGCTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CCA 90 bp | GTCTTCCTCAAGCCTGACCTGATCCAGGCAGCTGGATCCCAGTCCTGGCCACCTTGCTGGGAGCTCAGCTaGGAGAAGAACTCAGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: VFLKPDLIQAAGSQSWPPCWELS*EKNSEG Trigger: TCCTTCTGAGTTCTTCTCCCAGCTGAGCTCCCAGCA...AGGTGGCCAGGACTGGGATCCAGCTGCCTGGATCAGGTCAGGCTTGAGGAAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CCA 90 bp | CAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCAAGCCTGACCCAGCTGGCCTGTGAGTaGCCGCTGGGCGAGGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: QQWTVLKRPLKQSSSSLTQLACE*PLGEGK Trigger: TTTACCCTCGCCCAGCGGCCACTCACAGGCCAGCTG...GGTCAGGCTTGAGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CCA 90 bp | GAGGACAGCTGTTCCACAGCCGTGCTGGCAGGGCAAGAGTTGAGACAGGAAATGATGAAGGTTGCCTTCTaGGACACTGGCCTGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: EDSCSTAVLAGQELRQEMMKVAF*DTGLLP Trigger: GGGGAGCAGGCCAGTGTCCCAGAAGGCAACCTTCAT...CATTTCCTGTCTCAACTCTTGCCCTGCCAGCACGGCTGTGGAACAGCTGTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
||
| CDS-3UTR TCA 90 bp | GCCAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTAGAACTTGGAGGGAATaGGGGGCCACCAGGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARTVLSSGLSSRDLLSSLRTWRE*GATRRR Trigger: CCTTCGCCTGGTGGCCCCTCATTCCCTCCAAGTTCT...AAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCAAGCCTGACCACGGAGGTCAGTGACTaGGACTCTGGGAACGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: QQWTVLKRPLKQSSSSLTTEVSD*DSGNDP Trigger: CGGGTCGTTCCCAGAGTCCCAGTCACTGACCTCCGT...GGTCAGGCTTGAGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
||
| CDS-3UTR CCA 90 bp | GCCAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTGCATCCTCCCAGCTGTaGCCCAGAAGACGTCTACGG | + |
|
Preference number: 4 (lower is better) Translates to: ARTVLSSGLSSRDLLSSLASSQL*PRRRLR Trigger: CCGTAGACGTCTTCTGGGCCACAGCTGGGAGGATGC...AAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
||
| CDS-3UTR CCA 90 bp | CCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCAAGCCTGAGGTCTCCCCCATGCTaGGAGCTCAGCTGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PQQWTVLKRPLKQSSSSLRSPPC*ELSWEK Trigger: CTTCTCCCAGCTGAGCTCCCAGCATGGGGGAGACCT...CAGGCTTGAGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
||
| CDS-3UTR CCA 90 bp | AGGGATAGCCAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGAGGTCTCCCCCATGCTaGGAGCTCAGCTGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RDSQDSPQQWTVLKRPLKRSPPC*ELSWEK Trigger: CTTCTCCCAGCTGAGCTCCCAGCATGGGGGAGACCT...CTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTGGCTATCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
||
| 3UTR CAA 72 bp | ACTCGGGGCTCAGGTTCCAGTGGACTCCTTCATGAGTaGGTGAGGCAGCCGTGGAAAGATCCAACAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TRGSGSSGLLHE*VRQPWKDPTAT Trigger: AGTGGCTGTTGGATCTTTCCACGGCTGCCTCACCAACTCATGAAGGAGTCCACTGGAACCTGAGCCCCGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
||
| CDS-3UTR TCA 90 bp | CCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCAAGCCTGGAGGAGAGCCATTTCTaGAGGTCTCCCCCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQQWTVLKRPLKQSSSSLEESHF*RSPPCW Trigger: CCAGCATGGGGGAGACCTTCAGAAATGGCTCTCCTC...CAGGCTTGAGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
||
| CDS-3UTR TCA 90 bp | CCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCAAGCCTGAGTAGCCCTGGTTGGTaGAGCAGCTGGCCTGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PQQWTVLKRPLKQSSSSLSSPGW*SSWPVS Trigger: ACTCACAGGCCAGCTGCTTCACCAACCAGGGCTACT...CAGGCTTGAGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
||
| CDS-3UTR GCA 90 bp | AGACAGGAAATGGGGCAGAGGGAAGTAAGGAGCCCCAGCAAGCTCAGGGATAAATCTGGGACACTGGCCTaGTCCCCAGAGCTATTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQEMGQREVRSPSKLRDKSGTLA*SPELLA Trigger: TGCCAATAGCTCTGGGGAGCAGGCCAGTGTCCCAGA...TTTATCCCTGAGCTTGCTGGGGCTCCTTACTTCCCTCTGCCCCATTTCCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
||
| CDS-3UTR GCA 90 bp | GATAGCCAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTGGGACACTGGCCTaGTCCCCAGAGCTATTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DSQDSPQQWTVLKRPLKQSGTLA*SPELLA Trigger: TGCCAATAGCTCTGGGGAGCAGGCCAGTGTCCCAGA...CTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTGGCTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CCA 90 bp | ATAGCCAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTACGGAGGTCAGTGACTaGGACTCTGGGAACGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: IARTVLSSGLSSRDLLSSTEVSD*DSGNDP Trigger: CGGGTCGTTCCCAGAGTCCCAGTCACTGACCTCCGT...ACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTGGCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
||
| CDS-3UTR CCA 90 bp | AGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTGCAGCAGGTCATCCCTaGGCGGGAAGGCACAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RTVLSSGLSSRDLLSSLPAAGHP*AGRHSS Trigger: ACTACTGTGCCTTCCCGCCCAGGGATGACCTGCTGC...AGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
||
| CDS-3UTR CCA 90 bp | AGGGATAGCCAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGTGCCTTCTGGGACACTaGCCTGCTCCCCAGAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: RDSQDSPQQWTVLKRPLKCLLGH*PAPQSY Trigger: ATAGCTCTGGGGAGCAGGCCAGTGTCCCAGAAGGCA...CTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTGGCTATCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
||
| CDS-3UTR CCA 90 bp | AGGGATAGCCAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGATGAAGGTTGCCTTCTaGGACACTGGCCTGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RDSQDSPQQWTVLKRPLKMKVAF*DTGLLP Trigger: GGGGAGCAGGCCAGTGTCCCAGAAGGCAACCTTCAT...CTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTGGCTATCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR TCA 90 bp | CAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCAAGCCTGACCCCAGCAGAAGGTATCTaGGCCATGACATGGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QQWTVLKRPLKQSSSSLTPAEGI*AMTWGG Trigger: TCCTCCCCATGTCATGGCTCAGATACCTTCTGCTGG...GGTCAGGCTTGAGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
||
| CDS-3UTR TCA 90 bp | GATAGCCAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGCCAGCAGAAGGTATCTaGGCCATGACATGGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSQDSPQQWTVLKRPLKQPAEGI*AMTWGG Trigger: TCCTCCCCATGTCATGGCTCAGATACCTTCTGCTGG...CTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTGGCTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
||
| CDS-3UTR TCA 90 bp | ATAGCCAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTGAGGAGAGCCATTTCTaGAGGTCTCCCCCATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IARTVLSSGLSSRDLLSSEESHF*RSPPCW Trigger: CCAGCATGGGGGAGACCTTCAGAAATGGCTCTCCTC...ACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTGGCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR GCA 90 bp | CAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTGTAACAGGAGCAGCTaGACGGCCTTGGAATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QDSPQQWTVLKRPLKQSSCNRSS*TALESP Trigger: CGGAGATTCCAAGGCCGTGCAGCTGCTCCTGTTACA...GGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR GCA 90 bp | GCCAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCTTGCCCATGAAGGTTaGCTTCTGGGACACTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ARTVLSSGLSSRDLLSSLLAHEG*LLGHWP Trigger: AGGCCAGTGTCCCAGAAGGCAACCTTCATGGGCAAG...AAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR GCA 90 bp | CAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCAAGCCTGACCCTTGCCCATGAAGGTTaGCTTCTGGGACACTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QQWTVLKRPLKQSSSSLTLAHEG*LLGHWP Trigger: AGGCCAGTGTCCCAGAAGGCAACCTTCATGGGCAAG...GGTCAGGCTTGAGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR TCA 90 bp | CAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCGGACGTGGCAGGTTGTaGCATTCAGAGCCTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QDSPQQWTVLKRPLKQSSGRGRL*HSEPLH Trigger: ATGAAGAGGCTCTGAATGTCACAACCTGCCACGTCC...GGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR TCA 90 bp | AGACAGGAAATGGGGCAGAGGGAAGTAAGGAGCCCCAGCAAGCTCAGGGATAAACACAGGGGTCATAGGTaGAGTACACCTGGCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: RQEMGQREVRSPSKLRDKHRGHR*STPGRI Trigger: AATCCTGCCAGGTGTACTTCACCTATGACCCCTGTG...TTTATCCCTGAGCTTGCTGGGGCTCCTTACTTCCCTCTGCCCCATTTCCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| CDS-3UTR TCA 90 bp | ACCAAACCCTGGTTAGACCAGGAAGTAGCAAATGGAGTTCAGAAGTGGATGATTTCCCTCGGGCAGCCTTaGCCCATCCTCCTCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: TKPWLDQEVANGVQKWMISLGQP*PILLHL Trigger: GAGGTGGAGGAGGATGGGTCAAGGCTGCCCGAGGGA...AATCATCCACTTCTGAACTCCATTTGCTACTTCCTGGTCTAACCAGGGTTTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| CDS-3UTR GCA 90 bp | CAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCGAGGGAAGTCCCTCATaGAGGGAGAGTGGAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QDSPQQWTVLKRPLKQSSEGSPS*RESGDL Trigger: AAGATCTCCACTCTCCCTGCATGAGGGACTTCCCTC...GGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CCA 90 bp | CCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCAAGCCTGCTTCATGGGATCTGCTaGCCTTGTCCGAAAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PQQWTVLKRPLKQSSSSLLHGIC*PCPKGQ Trigger: CTGACCTTTCGGACAAGGCCAGCAGATCCCATGAAG...CAGGCTTGAGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CCA 90 bp | CCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCAAGCCTGCTCATGCAGGGAGAGTaGAGATCTTTCTTCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PQQWTVLKRPLKQSSSSLLMQGE*RSFFRG Trigger: GCCCCTGAAGAAAGATCTCCACTCTCCCTGCATGAG...CAGGCTTGAGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR TCA 90 bp | GATAGCCAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTGTTTCGTTGAGCTTTaGCCCTCACCTGGACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DSQDSPQQWTVLKRPLKQCFVEL*PSPGPH Trigger: ATGAGGTCCAGGTGAGGGTCAAAGCTCAACGAAACA...CTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTGGCTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR TCA 90 bp | AGGGATAGCCAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGTGTTTCGTTGAGCTTTaGCCCTCACCTGGACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RDSQDSPQQWTVLKRPLKCFVEL*PSPGPH Trigger: ATGAGGTCCAGGTGAGGGTCAAAGCTCAACGAAACA...CTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTGGCTATCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
||
| CDS-3UTR TCA 90 bp | AGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCACAGGGGTCATAGGTaGAGTACACCTGGCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: RTVLSSGLSSRDLLSSLPHRGHR*STPGRI Trigger: AATCCTGCCAGGTGTACTTCACCTATGACCCCTGTG...AGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR GCA 90 bp | GAGGTCAGGAGACAGCCCGGGATAAGGAAGATGGGTCAAGTGCTATCCCCTTCAAGCCACTGCTGTCTCTaGTTGAGGCTTAATACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EVRRQPGIRKMGQVLSPSSHCCL*LRLNTD Trigger: ATCCGTATTAAGCCTCAAGCAGAGACAGCAGTGGCT...TGAAGGGGATAGCACTTGACCCATCTTCCTTATCCCGGGCTGTCTCCTGACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
||
| CDS-3UTR GCA 90 bp | AGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTGAGGGAAGTCCCTCATaGAGGGAGAGTGGAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTVLSSGLSSRDLLSSLPEGSPS*RESGDL Trigger: AAGATCTCCACTCTCCCTGCATGAGGGACTTCCCTC...AGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CCA 90 bp | CAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCGACTTGGCATGGACGTaGCAGGTTGTGACATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QDSPQQWTVLKRPLKQSSDLAWT*QVVTFR Trigger: TCTGAATGTCACAACCTGCCACGTCCATGCCAAGTC...GGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR TCA 90 bp | CAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCACTGCTGTCTCTGCTTaGGGCTTAATACGGATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QDSPQQWTVLKRPLKQSSTAVSA*GLIRMH Trigger: ATGCATCCGTATTAAGCCTCAAGCAGAGACAGCAGT...GGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR GCA 90 bp | CCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCAAGCCTGAGCCACTGCTGTCTCTaGTTGAGGCTTAATACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PQQWTVLKRPLKQSSSSLSHCCL*LRLNTD Trigger: ATCCGTATTAAGCCTCAAGCAGAGACAGCAGTGGCT...CAGGCTTGAGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CCA 90 bp | ACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCAATGCTGGGAGCTCAGCTaGGAGAAGAACTCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVLSSGLSSRDLLSSLPQCWELS*EKNSEG Trigger: TCCTTCTGAGTTCTTCTCCCAGCTGAGCTCCCAGCA...TTGAGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CCA 90 bp | ACCAAACCCTGGTTAGACCAGGAAGTAGCAAATGGAGTTCAGAAGTGGATGATTTGCCTTCTGGGACACTaGCCTGCTCCCCAGAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: TKPWLDQEVANGVQKWMICLLGH*PAPQSY Trigger: ATAGCTCTGGGGAGCAGGCCAGTGTCCCAGAAGGCA...AATCATCCACTTCTGAACTCCATTTGCTACTTCCTGGTCTAACCAGGGTTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
||
| CDS-3UTR TCA 90 bp | CAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCAAGCCTGACCAGAGACATTGGCTCTTaGGTTGTAGAAGCATTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QQWTVLKRPLKQSSSSLTRDIGS*VVEAFK Trigger: CTTGAATGCTTCTACAACTCAAGAGCCAATGTCTCT...GGTCAGGCTTGAGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
||
| CDS-3UTR CCA 90 bp | CCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCAAGCCTGCTCAAATTCCAAGTATaGTTCAATGTAGTGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PQQWTVLKRPLKQSSSSLLKFQV*FNVVRD Trigger: GTCTCTCACTACATTGAACCATACTTGGAATTTGAG...CAGGCTTGAGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
||
| 3UTR CAA 72 bp | CCTATTTGGGAACCGAGGCAAGAAAATCCTGAAGGTTaGTCCATTTGCCCAGGATACACAGTGAAGAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: PIWEPRQENPEG*SICPGYTVKNV Trigger: CACGTTCTTCACTGTGTATCCTGGGCAAATGGACAAACCTTCAGGATTTTCTTGCCTCGGTTCCCAAATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
||
| CDS-3UTR GCA 90 bp | GAATCCTTCTCAGACCTTTTCAGCTGTGGAAATAAGTTGTATTCCTATTTGGGATGTAACAGGAGCAGCTaGACGGCCTTGGAATCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ESFSDLFSCGNKLYSYLGCNRSS*TALESP Trigger: CGGAGATTCCAAGGCCGTGCAGCTGCTCCTGTTACA...TCCCAAATAGGAATACAACTTATTTCCACAGCTGAAAAGGTCTGAGAAGGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
||
| CDS-3UTR CCA 90 bp | GAATCCTTCTCAGACCTTTTCAGCTGTGGAAATAAGTTGTATTCCTATTTGGGACTTCATGGGATCTGCTaGCCTTGTCCGAAAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESFSDLFSCGNKLYSYLGLHGIC*PCPKGQ Trigger: CTGACCTTTCGGACAAGGCCAGCAGATCCCATGAAG...TCCCAAATAGGAATACAACTTATTTCCACAGCTGAAAAGGTCTGAGAAGGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
||
| CDS-3UTR CCA 90 bp | CAAAAATGCCATGCACAGATCATTGAAAGAGAACTGAATCCTTCTCAGACCTTTCTCATGCAGGGAGAGTaGAGATCTTTCTTCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QKCHAQIIERELNPSQTFLMQGE*RSFFRG Trigger: GCCCCTGAAGAAAGATCTCCACTCTCCCTGCATGAG...AAAGGTCTGAGAAGGATTCAGTTCTCTTTCAATGATCTGTGCATGGCATTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
||
| 3UTR CAA 72 bp | AACAGGCTGCATTCAGTCTTATCAGGACCTCTTCGTTaGGGTTGTCAAAGCTGCTCTGATTTTAAGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NRLHSVLSGPLR*GCQSCSDFKTV Trigger: CACTGTCTTAAAATCAGAGCAGCTTTGACAACCCAAACGAAGAGGTCCTGATAAGACTGAATGCAGCCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
||
| CDS-3UTR TCA 90 bp | GAATCCTTCTCAGACCTTTTCAGCTGTGGAAATAAGTTGTATTCCTATTTGGGAACTGCTGTCTCTGCTTaGGGCTTAATACGGATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ESFSDLFSCGNKLYSYLGTAVSA*GLIRMH Trigger: ATGCATCCGTATTAAGCCTCAAGCAGAGACAGCAGT...TCCCAAATAGGAATACAACTTATTTCCACAGCTGAAAAGGTCTGAGAAGGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
||
| CDS-3UTR CCA 90 bp | ATTGAAAGAGAACTGAATCCTTCTCAGACCTTTTCAGCTGTGGAAATAAGTTGTGACTTGGCATGGACGTaGCAGGTTGTGACATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IERELNPSQTFSAVEISCDLAWT*QVVTFR Trigger: TCTGAATGTCACAACCTGCCACGTCCATGCCAAGTC...ACAACTTATTTCCACAGCTGAAAAGGTCTGAGAAGGATTCAGTTCTCTTTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR CAA 72 bp | GTGAGATCTCCACAAAGGACAGTGCTGACACAATGTTaGTGGTGTAAGCTTTTCTTAGCTTCAAGGATACAT | + |
|
Preference number: 4 (lower is better) Translates to: VRSPQRTVLTQC*WCKLFLASRIH Trigger: ATGTATCCTTGAAGCTAAGAAAAGCTTACACCACAAACATTGTGTCAGCACTGTCCTTTGTGGAGATCTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| 3UTR CAA 72 bp | GAATCCTTCTCAGACCTTTTCAGCTGTGGAAATAAGTaGTATTCCTATTTGGGAACCGAGGCAAGAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: ESFSDLFSCGNK*YSYLGTEARKS Trigger: GGATTTTCTTGCCTCGGTTCCCAAATAGGAATACAACTTATTTCCACAGCTGAAAAGGTCTGAGAAGGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| CDS-3UTR TCA 90 bp | GAATCCTTCTCAGACCTTTTCAGCTGTGGAAATAAGTTGTATTCCTATTTGGGAAGAGACATTGGCTCTTaGGTTGTAGAAGCATTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ESFSDLFSCGNKLYSYLGRDIGS*VVEAFK Trigger: CTTGAATGCTTCTACAACTCAAGAGCCAATGTCTCT...TCCCAAATAGGAATACAACTTATTTCCACAGCTGAAAAGGTCTGAGAAGGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| CDS-3UTR CAA 90 bp | GTCTTCCTCAAGCCTGACCTGATCCAGGCAGCTGGATCCCAGTCCTGGCCACCTATCCCTCGGGCAGCCTaGACCCATCCTCCTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: VFLKPDLIQAAGSQSWPPIPRAA*THPPPP Trigger: AGGTGGAGGAGGATGGGTCAAGGCTGCCCGAGGGAT...AGGTGGCCAGGACTGGGATCCAGCTGCCTGGATCAGGTCAGGCTTGAGGAAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CCA 90 bp | CATGAAGGTTGCCTTCTGGGACACTGGCCTGCTCCCCAGAGCTATTaGCAGACAGCCCCTCTCCATCACCTTCCGGCATCCGCTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HEGCLLGHWPAPQSY*QTAPLHHLPASAPE Trigger: CTCTGGAGCGGATGCCGGAAGGTGATGGAGAGGGGCTGTCTGCCAATAGCTCTGGGGAGCAGGCCAGTGTCCCAGAAGGCAACCTTCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS GCA 90 bp | CTGGGCGAGGGTAAAGGGGCAGAGTCCTTCTGTAACAGGAGCAGCTaGACGGCCTTGGAATCTCCGTCGAGCACTTCCAGCGGAGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LGEGKGAESFCNRSS*TALESPSSTSSGEI Trigger: GATCTCTCCGCTGGAAGTGCTCGACGGAGATTCCAAGGCCGTGCAGCTGCTCCTGTTACAGAAGGACTCTGCCCCTTTACCCTCGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CCA 90 bp | GTAAAGGGGCAGAGTCCTTCTGTAACAGGAGCAGCTGCACGGCCTTaGAATCTCCGTCGAGCACTTCCAGCGGAGAGATCTCAGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VKGQSPSVTGAAARP*NLRRALPAERSQGQ Trigger: CTGCCCCTGAGATCTCTCCGCTGGAAGTGCTCGACGGAGATTCCAAGGCCGTGCAGCTGCTCCTGTTACAGAAGGACTCTGCCCCTTTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS TCA 90 bp | TTCCCAGCACACCACATTTATGTCAAGGAGGTCCACGGAGGTCAGTaGCTGGGACTCTGGGAACGACCCGAGGATCAGGTTGCAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FPAHHIYVKEVHGGQ*LGLWERPEDQVAGP Trigger: TGGGCCTGCAACCTGATCCTCGGGTCGTTCCCAGAGTCCCAGTCACTGACCTCCGTGGACCTCCTTGACATAAATGTGGTGTGCTGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS GCA 90 bp | GACTCTGGGAACGACCCGAGGATCAGGTTGCAGGCCCAGGATGCCTaGCTCACAAGAGTTAGCTCACAGGTTTTGTTCCAGTGTCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DSGNDPRIRLQAQDA*LTRVSSQVLFQCRR Trigger: CCTGCGACACTGGAACAAAACCTGTGAGCTAACTCTTGTGAGGCAGGCATCCTGGGCCTGCAACCTGATCCTCGGGTCGTTCCCAGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CCA 90 bp | CAGCACACCACATTTATGTCAAGGAGGTCCACGGAGGTCAGTGACTaGGACTCTGGGAACGACCCGAGGATCAGGTTGCAGGCCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QHTTFMSRRSTEVSD*DSGNDPRIRLQAQD Trigger: ATCCTGGGCCTGCAACCTGATCCTCGGGTCGTTCCCAGAGTCCCAGTCACTGACCTCCGTGGACCTCCTTGACATAAATGTGGTGTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CAA 90 bp | AGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTGACCCGAGGATCAGGTaGCAGGCCCAGGATGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RTVLSSGLSSRDLLSSLPDPRIR*QAQDAC Trigger: GCAGGCATCCTGGGCCTGCAACCTGATCCTCGGGTC...AGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CAA 90 bp | ATAGCCAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTGACCCGAGGATCAGGTaGCAGGCCCAGGATGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IARTVLSSGLSSRDLLSSDPRIR*QAQDAC Trigger: GCAGGCATCCTGGGCCTGCAACCTGATCCTCGGGTC...ACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTGGCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CAA 90 bp | GCAGTCTTCCTCAAGCCTGACCTGATCCAGGCAGCTGGATCCCAGTCCTGGCCAATCAATGTGCAGAACTaGGAGGGAATGAGGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AVFLKPDLIQAAGSQSWPINVQN*EGMRGH Trigger: GTGGCCCCTCATTCCCTCCAAGTTCTGCACATTGAT...TGGCCAGGACTGGGATCCAGCTGCCTGGATCAGGTCAGGCTTGAGGAAGACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CCA 90 bp | TGCTGGGAGCTCAGCTGGGAGAAGAACTCAGAAGGATCTGGGATGTaGCACTTGAGAACTGTCTTCAGCCATGGCCCAAGGTACCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: CWELSWEKNSEGSGM*HLRTVFSHGPRYRH Trigger: GTGCCGGTACCTTGGGCCATGGCTGAAGACAGTTCTCAAGTGCCACATCCCAGATCCTTCTGAGTTCTTCTCCCAGCTGAGCTCCCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CCA 90 bp | TCCCCCATGCTGGGAGCTCAGCTGGGAGAAGAACTCAGAAGGATCTaGGATGTGGCACTTGAGAACTGTCTTCAGCCATGGCCCAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SPMLGAQLGEELRRI*DVALENCLQPWPKV Trigger: TACCTTGGGCCATGGCTGAAGACAGTTCTCAAGTGCCACATCCCAGATCCTTCTGAGTTCTTCTCCCAGCTGAGCTCCCAGCATGGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CAA 90 bp | GGCAGCCGTGGAAAGATCCAACAGCCACTGCTGGGTAGGTATTGGTGTCCAAACGCCTCTGTCCTGATCTaGCCCATGAAGGTTGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSRGKIQQPLLGRYWCPNASVLI*PMKVAF Trigger: GAAGGCAACCTTCATGGGCAAGATCAGGACAGAGGC...GTTTGGACACCAATACCTACCCAGCAGTGGCTGTTGGATCTTTCCACGGCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| CDS-3UTR CAA 90 bp | ACATCACAACCTGAGGACAGCTGTTCCACAGCCGTGCTGGCAGGGCAAGAGTTGCACTGCTGTCTCTGCTaGAGGCTTAATACGGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: TSQPEDSCSTAVLAGQELHCCLC*RLNTDA Trigger: TGCATCCGTATTAAGCCTCAAGCAGAGACAGCAGTG...CAACTCTTGCCCTGCCAGCACGGCTGTGGAACAGCTGTCCTCAGGTTGTGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| CDS-3UTR CAA 90 bp | CAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCAAGCCTGACCGCCTCTGTCCTGATCTaGCCCATGAAGGTTGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QQWTVLKRPLKQSSSSLTASVLI*PMKVAF Trigger: GAAGGCAACCTTCATGGGCAAGATCAGGACAGAGGC...GGTCAGGCTTGAGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS TCA 90 bp | GAAGCCAGAAAAACAACCAAGGACCAGCAGAAGGTATCTGAGCCATaGCATGGGGAGGATCTCCTTCATGGGATCTGCTGGCCTTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: EARKTTKDQQKVSEP*HGEDLLHGICWPCP Trigger: CGGACAAGGCCAGCAGATCCCATGAAGGAGATCCTCCCCATGTCATGGCTCAGATACCTTCTGCTGGTCCTTGGTTGTTTTTCTGGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CAA 90 bp | AGGGATAGCCAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGTCTGGGATGTGGCACTaGAGAACTGTCTTCAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RDSQDSPQQWTVLKRPLKSGMWH*RTVFSH Trigger: ATGGCTGAAGACAGTTCTCAAGTGCCACATCCCAGA...CTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTGGCTATCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS GCA 90 bp | GTTGTAGAAGCATTCAAGATGGGAACAGTTTTTCACTGCTGCAGATaGCCAAGGTGTAGCCAGGAGCAGGAGGAAGACGTAGAGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: VVEAFKMGTVFHCCR*PRCSQEQEEDVEGQ Trigger: CTGTCCCTCTACGTCTTCCTCCTGCTCCTGGCTACACCTTGGGCATCTGCAGCAGTGAAAAACTGTTCCCATCTTGAATGCTTCTACAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CAA 90 bp | ACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCAAATCAATGTGCAGAACTaGGAGGGAATGAGGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TVLSSGLSSRDLLSSLPQINVQN*EGMRGH Trigger: GTGGCCCCTCATTCCCTCCAAGTTCTGCACATTGAT...TTGAGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CAA 90 bp | ATAGCCAGGACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTTCGATCTCCAAGGCATaGGGCAGATGGAAGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IARTVLSSGLSSRDLLSSSISKA*GRWKKK Trigger: CTTCTTCTTCCATCTGCCCAATGCCTTGGAGATCGA...ACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGTCCTGGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CAA 90 bp | ACAGTCCTCAGCAGTGGACTGTCCTCAAGAGACCTCTTAAGCAGTCTTCCTCAATCGATCTCCAAGGCATaGGGCAGATGGAAGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVLSSGLSSRDLLSSLPQSISKA*GRWKKK Trigger: CTTCTTCTTCCATCTGCCCAATGCCTTGGAGATCGA...TTGAGGAAGACTGCTTAAGAGGTCTCTTGAGGACAGTCCACTGCTGAGGACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS-3UTR CAA 90 bp | CAAAAATGCCATGCACAGATCATTGAAAGAGAACTGAATCCTTCTCAGACCTTTATCCCTCGGGCAGCCTaGACCCATCCTCCTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: QKCHAQIIERELNPSQTFIPRAA*THPPPP Trigger: AGGTGGAGGAGGATGGGTCAAGGCTGCCCGAGGGAT...AAAGGTCTGAGAAGGATTCAGTTCTCTTTCAATGATCTGTGCATGGCATTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| CDS-3UTR CAA 90 bp | ATTGAAAGAGAACTGAATCCTTCTCAGACCTTTTCAGCTGTGGAAATAAGTTGTTCTGGGATGTGGCACTaGAGAACTGTCTTCAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: IERELNPSQTFSAVEISCSGMWH*RTVFSH Trigger: ATGGCTGAAGACAGTTCTCAAGTGCCACATCCCAGA...ACAACTTATTTCCACAGCTGAAAAGGTCTGAGAAGGATTCAGTTCTCTTTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089398.9 |
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| CDS CAA 90 bp | ATCGGTGTTCAGGGTCAGGATGGGGCCCTGGCCTCTGTCCTGATCTaGCCCATGAAGGTTGCCTTCTGGGACACTGGCCTGCTCCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: IGVQGQDGALASVLI*PMKVAFWDTGLLPR Trigger: TCTGGGGAGCAGGCCAGTGTCCCAGAAGGCAACCTTCATGGGCAAGATCAGGACAGAGGCCAGGGCCCCATCCTGACCCTGAACACCGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CAA 72 bp | ACATGGGGAGGATCTCCTTCATGGGATCTGCTGGCCTaGTCCGAAAGGTCAGGGGCTGGCTCCAGGGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: TWGGSPSWDLLA*SERSGAGSRDS Trigger: GGAGTCCCTGGAGCCAGCCCCTGACCTTTCGGACAAGGCCAGCAGATCCCATGAAGGAGATCCTCCCCATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CCA 72 bp | ATGGGATCTGCTGGCCTTGTCCGAAAGGTCAGGGGCTaGCTCCAGGGACTCCAGGTCCCGGTATTGTTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: MGSAGLVRKVRG*LQGLQVPVLFR Trigger: ACGAAACAATACCGGGACCTGGAGTCCCTGGAGCCAGCCCCTGACCTTTCGGACAAGGCCAGCAGATCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CAA 72 bp | AGTGACTGGGACTCTGGGAACGACCCGAGGATCAGGTaGCAGGCCCAGGATGCCTGCCTCACAAGAGTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SDWDSGNDPRIR*QAQDACLTRVS Trigger: GCTAACTCTTGTGAGGCAGGCATCCTGGGCCTGCAACCTGATCCTCGGGTCGTTCCCAGAGTCCCAGTCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CAA 90 bp | ACGGAGGTCAGTGACTGGGACTCTGGGAACGACCCGAGGATCAGGTaGCAGGCCCAGGATGCCTGCCTCACAAGAGTTAGCTCACAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: TEVSDWDSGNDPRIR*QAQDACLTRVSSQV Trigger: AACCTGTGAGCTAACTCTTGTGAGGCAGGCATCCTGGGCCTGCAACCTGATCCTCGGGTCGTTCCCAGAGTCCCAGTCACTGACCTCCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CAA 90 bp | GGTAAAGGGGCAGAGTCCTTCTGTAACAGGAGCAGCTGCACGGCCTaGGAATCTCCGTCGAGCACTTCCAGCGGAGAGATCTCAGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GKGAESFCNRSSCTA*ESPSSTSSGEISGA Trigger: TGCCCCTGAGATCTCTCCGCTGGAAGTGCTCGACGGAGATTCCAAGGCCGTGCAGCTGCTCCTGTTACAGAAGGACTCTGCCCCTTTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS GCA 72 bp | GGTAAAGGGGCAGAGTCCTTCTGTAACAGGAGCAGCTaGACGGCCTTGGAATCTCCGTCGAGCACTTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GKGAESFCNRSS*TALESPSSTSS Trigger: GCTGGAAGTGCTCGACGGAGATTCCAAGGCCGTGCAGCTGCTCCTGTTACAGAAGGACTCTGCCCCTTTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CCA 72 bp | GCCTCTGTCCTGATCTTGCCCATGAAGGTTGCCTTCTaGGACACTGGCCTGCTCCCCAGAGCTATTGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ASVLILPMKVAF*DTGLLPRAIGR Trigger: TCTGCCAATAGCTCTGGGGAGCAGGCCAGTGTCCCAGAAGGCAACCTTCATGGGCAAGATCAGGACAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CCA 72 bp | CAGAGTCCTTCTGTAACAGGAGCAGCTGCACGGCCTTaGAATCTCCGTCGAGCACTTCCAGCGGAGAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: QSPSVTGAAARP*NLRRALPAERS Trigger: AGATCTCTCCGCTGGAAGTGCTCGACGGAGATTCCAAGGCCGTGCAGCTGCTCCTGTTACAGAAGGACTCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CAA 90 bp | TTGCAGGCCCAGGATGCCTGCCTCACAAGAGTTAGCTCACAGGTTTaGTTCCAGTGTCGCAGGTTCGACTTGGCATGGACGTGGCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LQAQDACLTRVSSQV*FQCRRFDLAWTWQV Trigger: AACCTGCCACGTCCATGCCAAGTCGAACCTGCGACACTGGAACAAAACCTGTGAGCTAACTCTTGTGAGGCAGGCATCCTGGGCCTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CAA 90 bp | GAGCTCAGCTGGGAGAAGAACTCAGAAGGATCTGGGATGTGGCACTaGAGAACTGTCTTCAGCCATGGCCCAAGGTACCGGCACTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: ELSWEKNSEGSGMWH*RTVFSHGPRYRHLT Trigger: GGTCAAGTGCCGGTACCTTGGGCCATGGCTGAAGACAGTTCTCAAGTGCCACATCCCAGATCCTTCTGAGTTCTTCTCCCAGCTGAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS GCA 72 bp | AACGACCCGAGGATCAGGTTGCAGGCCCAGGATGCCTaGCTCACAAGAGTTAGCTCACAGGTTTTGTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: NDPRIRLQAQDA*LTRVSSQVLFQ Trigger: CTGGAACAAAACCTGTGAGCTAACTCTTGTGAGGCAGGCATCCTGGGCCTGCAACCTGATCCTCGGGTCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS TCA 72 bp | TCAGCATCTCCAAGAAGAGCCACTGCTGTCTCTGCTTaGGGCTTAATACGGATGCATCCTCCCAGCTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SASPRRATAVSA*GLIRMHPPSCG Trigger: GCCACAGCTGGGAGGATGCATCCGTATTAAGCCTCAAGCAGAGACAGCAGTGGCTCTTCTTGGAGATGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CCA 72 bp | TTGTTCCAGTGTCGCAGGTTCGACTTGGCATGGACGTaGCAGGTTGTGACATTCAGAGCCTCTTCATGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LFQCRRFDLAWT*QVVTFRASSWL Trigger: GAGCCATGAAGAGGCTCTGAATGTCACAACCTGCCACGTCCATGCCAAGTCGAACCTGCGACACTGGAACAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CCA 72 bp | TGCTTGAGGCTTAATACGGATGCATCCTCCCAGCTGTaGCCCAGAAGACGTCTACGGGCCTCAAATTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: CLRLNTDASSQL*PRRRLRASNSK Trigger: CTTGGAATTTGAGGCCCGTAGACGTCTTCTGGGCCACAGCTGGGAGGATGCATCCGTATTAAGCCTCAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CCA 72 bp | CTCAGCTGGGAGAAGAACTCAGAAGGATCTGGGATGTaGCACTTGAGAACTGTCTTCAGCCATGGCCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSWEKNSEGSGM*HLRTVFSHGPR Trigger: CCTTGGGCCATGGCTGAAGACAGTTCTCAAGTGCCACATCCCAGATCCTTCTGAGTTCTTCTCCCAGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CCA 72 bp | CTGGGAGCTCAGCTGGGAGAAGAACTCAGAAGGATCTaGGATGTGGCACTTGAGAACTGTCTTCAGCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: LGAQLGEELRRI*DVALENCLQPW Trigger: CCATGGCTGAAGACAGTTCTCAAGTGCCACATCCCAGATCCTTCTGAGTTCTTCTCCCAGCTGAGCTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CAA 72 bp | CAGGATGCCTGCCTCACAAGAGTTAGCTCACAGGTTTaGTTCCAGTGTCGCAGGTTCGACTTGGCATGGACG | + |
|
Preference number: 6 (lower is better) Translates to: QDACLTRVSSQV*FQCRRFDLAWT Trigger: CGTCCATGCCAAGTCGAACCTGCGACACTGGAACAAAACCTGTGAGCTAACTCTTGTGAGGCAGGCATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CAA 72 bp | TGGGAGAAGAACTCAGAAGGATCTGGGATGTGGCACTaGAGAACTGTCTTCAGCCATGGCCCAAGGTACCGG | + |
|
Preference number: 6 (lower is better) Translates to: WEKNSEGSGMWH*RTVFSHGPRYR Trigger: CCGGTACCTTGGGCCATGGCTGAAGACAGTTCTCAAGTGCCACATCCCAGATCCTTCTGAGTTCTTCTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CCA 72 bp | CAGGTTTTGTTCCAGTGTCGCAGGTTCGACTTGGCATaGACGTGGCAGGTTGTGACATTCAGAGCCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: QVLFQCRRFDLA*TWQVVTFRASS Trigger: TGAAGAGGCTCTGAATGTCACAACCTGCCACGTCCATGCCAAGTCGAACCTGCGACACTGGAACAAAACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CAA 72 bp | ATCAGCATCTCCAAGAAGAGCCACTGCTGTCTCTGCTaGAGGCTTAATACGGATGCATCCTCCCAGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: ISISKKSHCCLC*RLNTDASSQLW Trigger: CCACAGCTGGGAGGATGCATCCGTATTAAGCCTCAAGCAGAGACAGCAGTGGCTCTTCTTGGAGATGCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CAA 90 bp | ACAAGAGTTAGCTCACAGGTTTTGTTCCAGTGTCGCAGGTTCGACTaGGCATGGACGTGGCAGGTTGTGACATTCAGAGCCTCTTCATGG | + |
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Preference number: 6 (lower is better) Translates to: TRVSSQVLFQCRRFD*AWTWQVVTFRASSW Trigger: CCATGAAGAGGCTCTGAATGTCACAACCTGCCACGTCCATGCCAAGTCGAACCTGCGACACTGGAACAAAACCTGTGAGCTAACTCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CAA 90 bp | GACCTTCCAGCTTATGTTACATCTCTGGGTATCAATGTGCAGAACTaGGAGGGAATGAGGGGCCACCAGGCGAAGGTTGTCAAAGGGATG | + |
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Preference number: 6 (lower is better) Translates to: DLPAYVTSLGINVQN*EGMRGHQAKVVKGM Trigger: CATCCCTTTGACAACCTTCGCCTGGTGGCCCCTCATTCCCTCCAAGTTCTGCACATTGATACCCAGAGATGTAACATAAGCTGGAAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS TCA 72 bp | GAACTGTCTTCAGCCATGGCCCAAGGTACCGGCACTTaGCCAAAATGTAGACGCAGGAGAAGAAGCCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: ELSSAMAQGTGT*PKCRRRRRSQK Trigger: TTTCTGGCTTCTTCTCCTGCGTCTACATTTTGGTCAAGTGCCGGTACCTTGGGCCATGGCTGAAGACAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS GCA 72 bp | GCATTCAAGATGGGAACAGTTTTTCACTGCTGCAGATaGCCAAGGTGTAGCCAGGAGCAGGAGGAAGACGTA | + |
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Preference number: 6 (lower is better) Translates to: AFKMGTVFHCCR*PRCSQEQEEDV Trigger: TACGTCTTCCTCCTGCTCCTGGCTACACCTTGGGCATCTGCAGCAGTGAAAAACTGTTCCCATCTTGAATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CCA 72 bp | GCCCAGAAGACGTCTACGGGCCTCAAATTCCAAGTATaGTTCAATGTAGTGAGAGACCTGGGAGACCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: AQKTSTGLKFQV*FNVVRDLGDLP Trigger: TGGAAGGTCTCCCAGGTCTCTCACTACATTGAACCATACTTGGAATTTGAGGCCCGTAGACGTCTTCTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CAA 72 bp | GCTTATGTTACATCTCTGGGTATCAATGTGCAGAACTaGGAGGGAATGAGGGGCCACCAGGCGAAGGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: AYVTSLGINVQN*EGMRGHQAKVV Trigger: GACAACCTTCGCCTGGTGGCCCCTCATTCCCTCCAAGTTCTGCACATTGATACCCAGAGATGTAACATAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS GCA 72 bp | GTAGAAGCATTCAAGATGGGAACAGTTTTTCACTGCTaGAGATGCCCAAGGTGTAGCCAGGAGCAGGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: VEAFKMGTVFHC*RCPRCSQEQEE Trigger: TTCCTCCTGCTCCTGGCTACACCTTGGGCATCTGCAGCAGTGAAAAACTGTTCCCATCTTGAATGCTTCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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| CDS CCA 72 bp | TCAGAGCCTCTTCATGGCTCCACATGCAAGAGACATTaGCTCTTGAGTTGTAGAAGCATTCAAGATGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: SEPLHGSTCKRH*LLSCRSIQDGN Trigger: GTTCCCATCTTGAATGCTTCTACAACTCAAGAGCCAATGTCTCTTGCATGTGGAGCCATGAAGAGGCTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089398.9 ENSMUST00000163494.3 |
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