Pregenerated sensors for IL2RA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026770Ensembl transcript IDs: ENSMUST00000028111.6, ENSMUST00000150890.3
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCGCTTAGAGTGGCCTGCTGGGAAAGCATCTAAGTCCACGTCCTaGGACTTCCTTCAGCCTTCTGCTCCTGGCGCAGACCCTAGACAC | + |
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Preference number: 1 (lower is better) Translates to: QRLEWPAGKASKSTS*DFLQPSAPGADPRH Trigger: GTGTCTAGGGTCTGCGCCAGGAGCAGAAGGCTGAAGGAAGTCCCAGGACGTGGACTTAGATGCTTTCCCAGCAGGCCACTCTAAGCGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR TCA 90 bp | GGAGGGACTCTGTGGCAGCAGAAGTATGTTGTGAAACTCCTCATATaGTGGCTTCCTGGGACAGCAGAGAGGGAGACTGGAAGCAAGTCT | + |
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Preference number: 1 (lower is better) Translates to: GGTLWQQKYVVKLLI*WLPGTAERETGSKS Trigger: AGACTTGCTTCCAGTCTCCCTCTCTGCTGTCCCAGGAAGCCATCATATGAGGAGTTTCACAACATACTTCTGCTGCCACAGAGTCCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR TCA 90 bp | GTACGTGCCTTACTGGAGGGACTCTGTGGCAGCAGAAGTATGTTGTaGAACTCCTCATATGATGGCTTCCTGGGACAGCAGAGAGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: VRALLEGLCGSRSML*NSSYDGFLGQQRGR Trigger: TCTCCCTCTCTGCTGTCCCAGGAAGCCATCATATGAGGAGTTTCACAACATACTTCTGCTGCCACAGAGTCCCTCCAGTAAGGCACGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR GCA 90 bp | CAGCCTGTTTGCTTCTATAACCCCAGTCATCCTGCCAATGGGTGGTaGCTTTCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: QPVCFYNPSHPANGW*LSQWVGPSHINHQW Trigger: CCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCACCACCCATTGGCAGGATGACTGGGGTTATAGAAGCAAACAGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR CCA 90 bp | AACAAGAACGTGCTCAGAAGTCTGAGCATCAAACCCAGGTGCTTTTaGTATCTGTGGAAGAGGAGAGCACACTGGGATAGCCCAGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: NKNVLRSLSIKPRCF*YLWKRRAHWDSPVP Trigger: AGGCACTGGGCTATCCCAGTGTGCTCTCCTCTTCCACAGATACCAAAAGCACCTGGGTTTGATGCTCAGACTTCTGAGCACGTTCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR CCA 90 bp | CCATGCTTCTTCCAAAGAGAAGCCACTGCTTACTGGCTTGCTCACTaGCTCATGCTCAGCCTGTTTGCTTCTATAACCCCAGTCATCCTG | + |
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Preference number: 1 (lower is better) Translates to: PCFFQREATAYWLAH*LMLSLFASITPVIL Trigger: CAGGATGACTGGGGTTATAGAAGCAAACAGGCTGAGCATGAGCCAGTGAGCAAGCCAGTAAGCAGTGGCTTCTCTTTGGAAGAAGCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR CCA 90 bp | CACGGAAGAAAGCCATGCTTCTTCCAAAGAGAAGCCACTGCTTACTaGCTTGCTCACTGGCTCATGCTCAGCCTGTTTGCTTCTATAACC | + |
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Preference number: 1 (lower is better) Translates to: HGRKPCFFQREATAY*LAHWLMLSLFASIT Trigger: GGTTATAGAAGCAAACAGGCTGAGCATGAGCCAGTGAGCAAGCCAGTAAGCAGTGGCTTCTCTTTGGAAGAAGCATGGCTTTCTTCCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR TCA 90 bp | CTCATGCTTGATAATTCCCACATCGCAGCTGTGCCTGAGTCTGGCTaGGATGCTCACGTGAGTCTCCAAACTATGTCTTGTCTTTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: LMLDNSHIAAVPESG*DAHVSLQTMSCLCL Trigger: AAGGCAAAGACAAGACATAGTTTGGAGACTCACGTGAGCATCTCAGCCAGACTCAGGCACAGCTGCGATGTGGGAATTATCAAGCATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR GCA 90 bp | AGATTGAACAAGAACGTGCTCAGAAGTCTGAGCATCAAACCCAGGTaGTTTTGGTATCTGTGGAAGAGGAGAGCACACTGGGATAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: RLNKNVLRSLSIKPR*FWYLWKRRAHWDSP Trigger: TGGGCTATCCCAGTGTGCTCTCCTCTTCCACAGATACCAAAAGCACCTGGGTTTGATGCTCAGACTTCTGAGCACGTTCTTGTTCAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR GCA 90 bp | AAGAAAGCCATGCTTCTTCCAAAGAGAAGCCACTGCTTACTGGCTTaGTCACTGGCTCATGCTCAGCCTGTTTGCTTCTATAACCCCAGT | + |
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Preference number: 1 (lower is better) Translates to: KKAMLLPKRSHCLLA*SLAHAQPVCFYNPS Trigger: ACTGGGGTTATAGAAGCAAACAGGCTGAGCATGAGCCAGTGAGCAAGCCAGTAAGCAGTGGCTTCTCTTTGGAAGAAGCATGGCTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR CCA 90 bp | TCAGTTTTAGAGGGTACACTACACAGTGGCCAGTACGTGCCTTACTaGAGGGACTCTGTGGCAGCAGAAGTATGTTGTGAAACTCCTCAT | + |
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Preference number: 1 (lower is better) Translates to: SVLEGTLHSGQYVPY*RDSVAAEVCCETPH Trigger: ATGAGGAGTTTCACAACATACTTCTGCTGCCACAGAGTCCCTCCAGTAAGGCACGTACTGGCCACTGTGTAGTGTACCCTCTAAAACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR TCA 90 bp | ATTCCCACATCGCAGCTGTGCCTGAGTCTGGCTGAGATGCTCACGTaGGTCTCCAAACTATGTCTTGTCTTTGCCTTACTTATGTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: IPTSQLCLSLAEMLT*VSKLCLVFALLMFF Trigger: GAAGAACATAAGTAAGGCAAAGACAAGACATAGTTTGGAGACTCACGTGAGCATCTCAGCCAGACTCAGGCACAGCTGCGATGTGGGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR CCA 90 bp | GACCCTAGACACAGGCTTCTGAATACCAGAGCTCCACAGTTCCCGTaGCTTCTCCACTTTGTTTTGATGTTATCTGAAGATTGTTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: DPRHRLLNTRAPQFP*LLHFVLMLSEDCSA Trigger: GGCAGAACAATCTTCAGATAACATCAAAACAAAGTGGAGAAGCCACGGGAACTGTGGAGCTCTGGTATTCAGAAGCCTGTGTCTAGGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR TCA 90 bp | CTCTTAAAGGTTCCAAAACCCAAAGCAGCACTGCTAGCTGATGTTTaGACACAGGAGCCTGTGGGGGCCATTTCTAATCCATACCACAAT | + |
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Preference number: 1 (lower is better) Translates to: LLKVPKPKAALLADV*TQEPVGAISNPYHN Trigger: ATTGTGGTATGGATTAGAAATGGCCCCCACAGGCTCCTGTGTTCAAACATCAGCTAGCAGTGCTGCTTTGGGTTTTGGAACCTTTAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR TCA 90 bp | CCAAACTATGTCTTGTCTTTGCCTTACTTATGTTCTTCATCACCGTaGCAAAGCATCAACAGAGATAGTGTAGGGAGGAGAGGGGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: PNYVLSLPYLCSSSP*QSINRDSVGRRGEL Trigger: GAGCTCCCCTCTCCTCCCTACACTATCTCTGTTGATGCTTTGTCACGGTGATGAAGAACATAAGTAAGGCAAAGACAAGACATAGTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR GCA 90 bp | CTGGGGTTGGGAAACATGATTCCACAGACAGCTCCCGGTGAGACCTaGGTTGTCTTGTTGATAAAGGCAAAATCTAGAATGACCATAAAA | + |
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Preference number: 1 (lower is better) Translates to: LGLGNMIPQTAPGET*VVLLIKAKSRMTIK Trigger: TTTTATGGTCATTCTAGATTTTGCCTTTATCAACAAGACAACGCAGGTCTCACCGGGAGCTGTCTGTGGAATCATGTTTCCCAACCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
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| 3UTR CCA 90 bp | ACCCAACATCTTCAGAGATCACTTAGTTGTAGTTTTCCCTGCAAATaGGTGATGTCCTTGAAAATGTGGCAGAGGGTTGGAAAGGGAACA | + |
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Preference number: 1 (lower is better) Translates to: TQHLQRSLSCSFPCK*VMSLKMWQRVGKGT Trigger: TGTTCCCTTTCCAACCCTCTGCCACATTTTCAAGGACATCACCCATTTGCAGGGAAAACTACAACTAAGTGATCTCTGAAGATGTTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
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| 3UTR TCA 90 bp | AGCTCCACAGTTCCCGTGGCTTCTCCACTTTGTTTTGATGTTATCTaGAGATTGTTCTGCCACAGTTTCTGTTCTTCAGGATGTCAAAAC | + |
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Preference number: 1 (lower is better) Translates to: SSTVPVASPLCFDVI*RLFCHSFCSSGCQN Trigger: GTTTTGACATCCTGAAGAACAGAAACTGTGGCAGAACAATCTTCAGATAACATCAAAACAAAGTGGAGAAGCCACGGGAACTGTGGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR GCA 90 bp | GAATCTTTCACTGAGGTTCCCTCATCCCAGATTTCTCTTAGATTGTaGCACATTTGCAATATAAGCTACCTAGAACACCAAAAAGATGTG | + |
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Preference number: 1 (lower is better) Translates to: ESFTEVPSSQISLRL*HICNISYLEHQKDV Trigger: CACATCTTTTTGGTGTTCTAGGTAGCTTATATTGCAAATGTGGCACAATCTAAGAGAAATCTGGGATGAGGGAACCTCAGTGAAAGATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR CCA 90 bp | CCTAGACACAGGCTTCTGAATACCAGAGCTCCACAGTTCCCGTGGCTTCTCCACAGGAAAGTGGATGGGTaGGGGTGGGTAGGGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: PRHRLLNTRAPQFPWLLHRKVDG*GWVGTE Trigger: CTCTGTCCCTACCCACCCCCACCCATCCACTTTCCT...GTGGAGAAGCCACGGGAACTGTGGAGCTCTGGTATTCAGAAGCCTGTGTCTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR GCA 90 bp | GTGGTGCCTTTCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTGGGACAACCCACATCGCAGCTGTaGCTGAGTCTGGCTGAGATG | + |
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Preference number: 2 (lower is better) Translates to: VVPFTVGWAFPYQSSVGQPTSQL*LSLAEM Trigger: CATCTCAGCCAGACTCAGGCACAGCTGCGATGTGGG...TTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR TCA 90 bp | CCTAGACACAGGCTTCTGAATACCAGAGCTCCACAGTTCCCGTGGCTTCTCCACGCTAGGATGAGCTTGTaGGAGCAGAAAGGAAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: PRHRLLNTRAPQFPWLLHARMSL*EQKGRR Trigger: CCTTCTTCCTTTCTGCTCTCACAAGCTCATCCTAGC...GTGGAGAAGCCACGGGAACTGTGGAGCTCTGGTATTCAGAAGCCTGTGTCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR TCA 90 bp | TCTATAACCCCAGTCATCCTGCCAATGGGTGGTGCCTTTCACAGTGGGTTGGGCCTAGACACAGGCTTCTaGATACCAGAGCTCCACAGT | + |
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Preference number: 2 (lower is better) Translates to: SITPVILPMGGAFHSGLGLDTGF*IPELHS Trigger: ACTGTGGAGCTCTGGTATTCAGAAGCCTGTGTCTAG...GCCCAACCCACTGTGAAAGGCACCACCCATTGGCAGGATGACTGGGGTTATAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR GCA 90 bp | GGGAGCTCTAGCTCAGTTTTAGAGGGTACACTACACAGTGGCCAGTACGTGCCTTCACTGCAATCCTCCTaGCTCAGTCTCCTGAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: GSSSSVLEGTLHSGQYVPSLQSS*LSLLRA Trigger: AGCTCTCAGGAGACTGAGGCAGGAGGATTGCAGTGA...AGGCACGTACTGGCCACTGTGTAGTGTACCCTCTAAAACTGAGCTAGAGCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR CCA 90 bp | AGTACGTGCCTTACTGGAGGGACTCTGTGGCAGCAGAAGTATGTTGTGAAACTCAAGAGGAGAGCACACTaGGATAGCCCAGTGCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: STCLTGGTLWQQKYVVKLKRRAH*DSPVPH Trigger: GTGAGGCACTGGGCTATCCCAGTGTGCTCTCCTCTT...GAGTTTCACAACATACTTCTGCTGCCACAGAGTCCCTCCAGTAAGGCACGTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR TCA 90 bp | CCTAGACACAGGCTTCTGAATACCAGAGCTCCACAGTTCCCGTGGCTTCTCCACTCAGGATGTCAAAACTaGAGCTTCATGAAAAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: PRHRLLNTRAPQFPWLLHSGCQN*SFMKRG Trigger: CCCCCTTTTCATGAAGCTTCAGTTTTGACATCCTGA...GTGGAGAAGCCACGGGAACTGTGGAGCTCTGGTATTCAGAAGCCTGTGTCTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR TCA 90 bp | TCAAAATCTTCCTGCACCAATCACCCAAGTGCAAGCAAGGGTCACAGCGATGTATGGGGTTGGGAAACATaGTTCCACAGACAGCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: SKSSCTNHPSASKGHSDVWGWET*FHRQLP Trigger: CGGGAGCTGTCTGTGGAATCATGTTTCCCAACCCCA...TACATCGCTGTGACCCTTGCTTGCACTTGGGTGATTGGTGCAGGAAGATTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
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| 3UTR-3UTR CCA 90 bp | GTGGTGCCTTTCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTGGGACAAACTGGAGGGACTCTGTaGCAGCAGAAGTATGTTGTG | + |
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Preference number: 2 (lower is better) Translates to: VVPFTVGWAFPYQSSVGQTGGTL*QQKYVV Trigger: CACAACATACTTCTGCTGCCACAGAGTCCCTCCAGT...TTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR TCA 90 bp | GTGCCTTTCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTGGGACAATCTCTGGTTCACCTCCAGTaGCCTATCTCCTTAAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: VPFTVGWAFPYQSSVGQSLVHLQ*PISLSK Trigger: CTTGCTTAAGGAGATAGGTCACTGGAGGTGAACCAG...AGATTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR TCA 90 bp | TCTATAACCCCAGTCATCCTGCCAATGGGTGGTGCCTTTCACAGTGGGTTGGGCTGTTCTTCATCACCGTaGCAAAGCATCAACAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: SITPVILPMGGAFHSGLGCSSSP*QSINRD Trigger: ATCTCTGTTGATGCTTTGTCACGGTGATGAAGAACA...GCCCAACCCACTGTGAAAGGCACCACCCATTGGCAGGATGACTGGGGTTATAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR CCA 90 bp | GGGAGCTCTAGCTCAGTTTTAGAGGGTACACTACACAGTGGCCAGTACGTGCCTTTGGCGTCTCAGATTTaGCTTGAGCTTTGTGATTCC | + |
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Preference number: 2 (lower is better) Translates to: GSSSSVLEGTLHSGQYVPLASQI*LELCDS Trigger: GGAATCACAAAGCTCAAGCCAAATCTGAGACGCCAA...AGGCACGTACTGGCCACTGTGTAGTGTACCCTCTAAAACTGAGCTAGAGCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR CAA 90 bp | TCACCTGTAAGCATCAGATTAGTGCAGGCTAAATTGAGCGTACAATaGACAGCTGTCCCAAAGAAACCAGCGCTTAGAGTGGCCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SPVSIRLVQAKLSVQ*TAVPKKPALRVACW Trigger: CCAGCAGGCCACTCTAAGCGCTGGTTTCTTTGGGACAGCTGTCAATTGTACGCTCAATTTAGCCTGCACTAATCTGATGCTTACAGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR TCA 90 bp | TCTATAACCCCAGTCATCCTGCCAATGGGTGGTGCCTTTCACAGTGGGTTGGGCTTAAACATGAGAATCTaGCTCAACTCATCTGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SITPVILPMGGAFHSGLGLNMRI*LNSSER Trigger: CCTCTCAGATGAGTTGAGTCAGATTCTCATGTTTAA...GCCCAACCCACTGTGAAAGGCACCACCCATTGGCAGGATGACTGGGGTTATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR GCA 90 bp | GTGGTGCCTTTCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTGGGACAACTTGCAAACTTTATATaGCCCAGTACAGGGGAACAC | + |
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Preference number: 2 (lower is better) Translates to: VVPFTVGWAFPYQSSVGQLANFI*PSTGEH Trigger: GTGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAG...TTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR GCA 90 bp | GGGAGCTCTAGCTCAGTTTTAGAGGGTACACTACACAGTGGCCAGTACGTGCCTTTTAACTTTCCTCCTTaGCGTGTCCCCACAAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: GSSSSVLEGTLHSGQYVPFNFPP*RVPTKD Trigger: ATCTTTTGTGGGGACACGGCAAGGAGGAAAGTTAAA...AGGCACGTACTGGCCACTGTGTAGTGTACCCTCTAAAACTGAGCTAGAGCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGGAGCTCTGTGCTGGCCTCAAACTCAAAATCTTCCTGCACCAATCACCCGATCTCATTCCTCACTaGATCTTCATTGTTTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: TVELCAGLKLKIFLHQSPDLIPH*IFIVWG Trigger: CCCCCAAACAATGAAGATGCAGTGAGGAATGAGATC...GGGTGATTGGTGCAGGAAGATTTTGAGTTTGAGGCCAGCACAGAGCTCCACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
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| 3UTR-3UTR TCA 90 bp | TCTATAACCCCAGTCATCCTGCCAATGGGTGGTGCCTTTCACAGTGGGTTGGGCTGTTTTGATGTTATCTaGAGATTGTTCTGCCACAGT | + |
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Preference number: 2 (lower is better) Translates to: SITPVILPMGGAFHSGLGCFDVI*RLFCHS Trigger: ACTGTGGCAGAACAATCTTCAGATAACATCAAAACA...GCCCAACCCACTGTGAAAGGCACCACCCATTGGCAGGATGACTGGGGTTATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR TCA 90 bp | CTGGCCTCAAACTCAAAATCTTCCTGCACCAATCACCCAAGTGCAAGCAAGGGTAAGGGAACAGAATGTTaGCTCATTGGCAGATGCAAG | + |
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Preference number: 2 (lower is better) Translates to: LASNSKSSCTNHPSASKGKGTEC*LIGRCK Trigger: CTTGCATCTGCCAATGAGTCAACATTCTGTTCCCTT...ACCCTTGCTTGCACTTGGGTGATTGGTGCAGGAAGATTTTGAGTTTGAGGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
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| 3UTR-3UTR TCA 90 bp | GTGGTGCCTTTCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTGGGACAATGCTGTTATGTCCTGTaGCTTCAGAATGTTCTAGAA | + |
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Preference number: 2 (lower is better) Translates to: VVPFTVGWAFPYQSSVGQCCYVL*LQNVLE Trigger: TTCTAGAACATTCTGAAGTCACAGGACATAACAGCA...TTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCACCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR TCA 90 bp | GGGAGCTCTAGCTCAGTTTTAGAGGGTACACTACACAGTGGCCAGTACGTGCCTCAGAGTTTTAAAGGCTaGTCAGTAAGTGATGAAATC | + |
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Preference number: 2 (lower is better) Translates to: GSSSSVLEGTLHSGQYVPQSFKG*SVSDEI Trigger: GATTTCATCACTTACTGATCAGCCTTTAAAACTCTG...AGGCACGTACTGGCCACTGTGTAGTGTACCCTCTAAAACTGAGCTAGAGCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGGAGCTCTGTGCTGGCCTCAAACTCAAAATCTTCCTGCACCAATCACCCAGAATGTTGACTCATTaGCAGATGCAAGTTTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: TVELCAGLKLKIFLHQSPRMLTH*QMQVFP Trigger: AGGGAAAACTTGCATCTGCCAATGAGTCAACATTCT...GGGTGATTGGTGCAGGAAGATTTTGAGTTTGAGGCCAGCACAGAGCTCCACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
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| 3UTR-3UTR GCA 90 bp | GGGCATTATCCGAGGATGCCTGGGATATCCAGTCTACAGCTAATCTTTTGTATACCAAGTCCATACCTGTaGCTTGAGTGTTCACCTGTA | + |
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Preference number: 2 (lower is better) Translates to: GHYPRMPGISSLQLIFCIPSPYL*LECSPV Trigger: TACAGGTGAACACTCAAGGCACAGGTATGGACTTGG...TATACAAAAGATTAGCTGTAGACTGGATATCCCAGGCATCCTCGGATAATGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR GCA 90 bp | GTGCCTTTCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTGGGACAATCTTATAATCACCACCTCTaGTTCCTTTTTCCTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: VPFTVGWAFPYQSSVGQSYNHHL*FLFPSF Trigger: GAAGGAAGGAAAAAGGAAGCAGAGGTGGTGATTATA...AGATTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR CCA 90 bp | GTGCCTTTCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTGGGACAATCTTTGGGCTTTCCAAACTaGGTTGTAACAATGAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: VPFTVGWAFPYQSSVGQSLGFPN*VVTMKS Trigger: TGACTTCATTGTTACAACCCAGTTTGGAAAGCCCAA...AGATTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR-3UTR TCA 90 bp | GGGCATTATCCGAGGATGCCTGGGATATCCAGTCTACAGCTAATCTTTTGTATAATGTTACATGAAAAGTaGCCACACCATCTCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: GHYPRMPGISSLQLIFCIMLHEK*PHHLSS Trigger: GGAGCTGAGATGGTGTGGTCACTTTTCATGTAACAT...TATACAAAAGATTAGCTGTAGACTGGATATCCCAGGCATCCTCGGATAATGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| 3UTR CAA 90 bp | GGAAACATGATTCCACAGACAGCTCCCGGTGAGACCTGCGTTGTCTaGTTGATAAAGGCAAAATCTAGAATGACCATAAAATCAACTAGC | + |
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Preference number: 2 (lower is better) Translates to: GNMIPQTAPGETCVV*LIKAKSRMTIKSTS Trigger: GCTAGTTGATTTTATGGTCATTCTAGATTTTGCCTTTATCAACAAGACAACGCAGGTCTCACCGGGAGCTGTCTGTGGAATCATGTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
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| 3UTR-3UTR GCA 90 bp | GTTTTACTTGGGCTTTCCAAACTGGGTTGTAACAATGAAGTCAACCTAAAGCTACAGCCGTTAGGTGAATaGTTGGCGTCTCAGATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: VLLGLSKLGCNNEVNLKLQPLGE*LASQIW Trigger: CCAAATCTGAGACGCCAAGCATTCACCTAACGGCTG...TAGCTTTAGGTTGACTTCATTGTTACAACCCAGTTTGGAAAGCCCAAGTAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR-3UTR CCA 90 bp | AGTACGTGCCTTACTGGAGGGACTCTGTGGCAGCAGAAGTATGTTGTGAAACTCATAAAAGACTCAAAATaGCTCTGTCTGACCTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: STCLTGGTLWQQKYVVKLIKDSK*LCLTFE Trigger: TTCAAAGGTCAGACAGAGCCATTTTGAGTCTTTTAT...GAGTTTCACAACATACTTCTGCTGCCACAGAGTCCCTCCAGTAAGGCACGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CAA 90 bp | AACATGATTCCACAGACAGCTCCCGGTGAGACCTGCGTTGTCTTGTaGATAAAGGCAAAATCTAGAATGACCATAAAATCAACTAGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: NMIPQTAPGETCVVL*IKAKSRMTIKSTSQ Trigger: TTGGCTAGTTGATTTTATGGTCATTCTAGATTTTGCCTTTATCAACAAGACAACGCAGGTCTCACCGGGAGCTGTCTGTGGAATCATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
||
| 3UTR CAA 90 bp | GTTAGATCCTATTCTTCAATGGCAAAGTCCAGTTTAGTGATAGAGTaGCTGTTATGTCCTGTGACTTCAGAATGTTCTAGAAACCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: VRSYSSMAKSSLVIE*LLCPVTSECSRNPG Trigger: CCCTGGGTTTCTAGAACATTCTGAAGTCACAGGACATAACAGCAACTCTATCACTAAACTGGACTTTGCCATTGAAGAATAGGATCTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR-3UTR TCA 90 bp | AAAGATCTGGTTCATACTTGGTCACATAAAAGACTCAAAATGGCTCTGTCTGACCAGCCTTTTCAGAAATaGAAACTGATAGTTTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: KDLVHTWSHKRLKMALSDQPFQK*KLIVWA Trigger: AGCCCAAACTATCAGTTTTCATTTCTGAAAAGGCTG...GTCAGACAGAGCCATTTTGAGTCTTTTATGTGACCAAGTATGAACCAGATCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CCA 72 bp | GAGTGGCCTGCTGGGAAAGCATCTAAGTCCACGTCCTaGGACTTCCTTCAGCCTTCTGCTCCTGGCGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: EWPAGKASKSTS*DFLQPSAPGAD Trigger: GTCTGCGCCAGGAGCAGAAGGCTGAAGGAAGTCCCAGGACGTGGACTTAGATGCTTTCCCAGCAGGCCACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR TCA 72 bp | CTTCTGCTCCTGGCGCAGACCCTAGACACAGGCTTCTaGATACCAGAGCTCCACAGTTCCCGTGGCTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LLLLAQTLDTGF*IPELHSSRGFS Trigger: GGAGAAGCCACGGGAACTGTGGAGCTCTGGTATTCAGAAGCCTGTGTCTAGGGTCTGCGCCAGGAGCAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CCA 72 bp | CTCACTGCAATCCTCCTGCCTCAGTCTCCTGAGAGCTaGGCTTACAGGTGTGTACCACTACCCACAGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LTAILLPQSPES*AYRCVPLPTAL Trigger: AAGAGCTGTGGGTAGTGGTACACACCTGTAAGCCCAGCTCTCAGGAGACTGAGGCAGGAGGATTGCAGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CCA 72 bp | CCCAGTCATCCTGCCAATGGGTGGTGCCTTTCACAGTaGGTTGGGCCTTCCCATATCAATCATCAGTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PSHPANGWCLSQ*VGPSHINHQWD Trigger: GTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCACCACCCATTGGCAGGATGACTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR GCA 72 bp | CGGAAGAAAGCCATGCTTCTTCCAAAGAGAAGCCACTaGTTACTGGCTTGCTCACTGGCTCATGCTCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RKKAMLLPKRSH*LLACSLAHAQP Trigger: AGGCTGAGCATGAGCCAGTGAGCAAGCCAGTAAGCAGTGGCTTCTCTTTGGAAGAAGCATGGCTTTCTTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR GCA 72 bp | TGGAGCTCTGTGCTGGCCTCAAACTCAAAATCTTCCTaGACCAATCACCCAAGTGCAAGCAAGGGTCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: WSSVLASNSKSS*TNHPSASKGHS Trigger: GCTGTGACCCTTGCTTGCACTTGGGTGATTGGTGCAGGAAGATTTTGAGTTTGAGGCCAGCACAGAGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
||
| 3UTR CCA 72 bp | AGAGCACACTGGGATAGCCCAGTGCCTCACAAAGTGTaGGCTAGAGATCAGCATAAAGACACCACCAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: RAHWDSPVPHKV*ARDQHKDTTRT Trigger: AGTCCTGGTGGTGTCTTTATGCTGATCTCTAGCCCACACTTTGTGAGGCACTGGGCTATCCCAGTGTGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CCA 72 bp | GAGGGTACACTACACAGTGGCCAGTACGTGCCTTACTaGAGGGACTCTGTGGCAGCAGAAGTATGTTGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: EGTLHSGQYVPY*RDSVAAEVCCE Trigger: TTCACAACATACTTCTGCTGCCACAGAGTCCCTCCAGTAAGGCACGTACTGGCCACTGTGTAGTGTACCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGCTCTAGCTCAGTTTTAGAGGGTACACTACACAGTGGCCAGTACGTGCCTCAAACCCAGGTGCTTTaGGTATCTGTGGAAGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GSSSSVLEGTLHSGQYVPQTQVL*VSVEEE Trigger: CTCCTCTTCCACAGATACCAAAAGCACCTGGGTTTG...AGGCACGTACTGGCCACTGTGTAGTGTACCCTCTAAAACTGAGCTAGAGCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR TCA 72 bp | CATTTACTGACTCAGAGACAGACTGGCTCTGCAGTCTaGTCTCACAAGGCTTTGGTGACCTGGATCAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: HLLTQRQTGSAV*SHKALVTWIRV Trigger: CACCCTGATCCAGGTCACCAAAGCCTTGTGAGATCAGACTGCAGAGCCAGTCTGTCTCTGAGTCAGTAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR TCA 72 bp | AGAGGGAGACTGGAAGCAAGTCTGGTTCACCTCCAGTaGCCTATCTCCTTAAGCAAGGCCCCACCTCTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: RGRLEASLVHLQ*PISLSKAPPLK Trigger: TTTAAGAGGTGGGGCCTTGCTTAAGGAGATAGGTCACTGGAGGTGAACCAGACTTGCTTCCAGTCTCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR GCA 72 bp | ATCTGTGGAAGAGGAGAGCACACTGGGATAGCCCAGTaGCTCACAAAGTGTGGGCTAGAGATCAGCATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: ICGRGEHTGIAQ*LTKCGLEISIK Trigger: CTTTATGCTGATCTCTAGCCCACACTTTGTGAGGCACTGGGCTATCCCAGTGTGCTCTCCTCTTCCACAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR GCA 72 bp | TGCTTCTATAACCCCAGTCATCCTGCCAATGGGTGGTaGCTTTCACAGTGGGTTGGGCCTTCCCATATCAAT | + |
|
Preference number: 3 (lower is better) Translates to: CFYNPSHPANGW*LSQWVGPSHIN Trigger: ATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCACCACCCATTGGCAGGATGACTGGGGTTATAGAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR GCA 72 bp | CTCAAACTCAAAATCTTCCTGCACCAATCACCCAAGTaGAAGCAAGGGTCACAGCGATGTACACCATGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: LKLKIFLHQSPK*KQGSQRCTPCP Trigger: CGGGCATGGTGTACATCGCTGTGACCCTTGCTTGCACTTGGGTGATTGGTGCAGGAAGATTTTGAGTTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
||
| 3UTR CCA 72 bp | GTGCTCAGAAGTCTGAGCATCAAACCCAGGTGCTTTTaGTATCTGTGGAAGAGGAGAGCACACTGGGATAGC | + |
|
Preference number: 3 (lower is better) Translates to: VLRSLSIKPRCF*YLWKRRAHWDS Trigger: GCTATCCCAGTGTGCTCTCCTCTTCCACAGATACCAAAAGCACCTGGGTTTGATGCTCAGACTTCTGAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CCA 72 bp | TCATCCTGCCAATGGGTGGTGCCTTTCACAGTGGGTTaGGCCTTCCCATATCAATCATCAGTGGGACAATCT | + |
|
Preference number: 3 (lower is better) Translates to: SSCQWVVPFTVG*AFPYQSSVGQS Trigger: AGATTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCACCACCCATTGGCAGGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CCA 72 bp | AAGCCATGCTTCTTCCAAAGAGAAGCCACTGCTTACTaGCTTGCTCACTGGCTCATGCTCAGCCTGTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KPCFFQREATAY*LAHWLMLSLFA Trigger: AGCAAACAGGCTGAGCATGAGCCAGTGAGCAAGCCAGTAAGCAGTGGCTTCTCTTTGGAAGAAGCATGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR-3UTR CAA 90 bp | TCTATAACCCCAGTCATCCTGCCAATGGGTGGTGCCTTTCACAGTGGGTTGGGCATCTTACGCAAGAGATaGAACAAGAACGTGCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SITPVILPMGGAFHSGLGILRKR*NKNVLR Trigger: TCTGAGCACGTTCTTGTTCAATCTCTTGCGTAAGAT...GCCCAACCCACTGTGAAAGGCACCACCCATTGGCAGGATGACTGGGGTTATAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR TCA 72 bp | GTTCCAAAACCCAAAGCAGCACTGCTAGCTGATGTTTaGACACAGGAGCCTGTGGGGGCCATTTCTAATCCA | + |
|
Preference number: 3 (lower is better) Translates to: VPKPKAALLADV*TQEPVGAISNP Trigger: TGGATTAGAAATGGCCCCCACAGGCTCCTGTGTTCAAACATCAGCTAGCAGTGCTGCTTTGGGTTTTGGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR TCA 72 bp | TTACTGGAGGGACTCTGTGGCAGCAGAAGTATGTTGTaGAACTCCTCATATGATGGCTTCCTGGGACAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLEGLCGSRSML*NSSYDGFLGQQ Trigger: CTGCTGTCCCAGGAAGCCATCATATGAGGAGTTTCACAACATACTTCTGCTGCCACAGAGTCCCTCCAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR TCA 72 bp | TCGCAGCTGTGCCTGAGTCTGGCTGAGATGCTCACGTaGGTCTCCAAACTATGTCTTGTCTTTGCCTTACTT | + |
|
Preference number: 3 (lower is better) Translates to: SQLCLSLAEMLT*VSKLCLVFALL Trigger: AAGTAAGGCAAAGACAAGACATAGTTTGGAGACTCACGTGAGCATCTCAGCCAGACTCAGGCACAGCTGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR TCA 72 bp | GATAATTCCCACATCGCAGCTGTGCCTGAGTCTGGCTaGGATGCTCACGTGAGTCTCCAAACTATGTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: DNSHIAAVPESG*DAHVSLQTMSC Trigger: ACAAGACATAGTTTGGAGACTCACGTGAGCATCTCAGCCAGACTCAGGCACAGCTGCGATGTGGGAATTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR GCA 72 bp | AAGAACGTGCTCAGAAGTCTGAGCATCAAACCCAGGTaGTTTTGGTATCTGTGGAAGAGGAGAGCACACTGG | + |
|
Preference number: 3 (lower is better) Translates to: KNVLRSLSIKPR*FWYLWKRRAHW Trigger: CCAGTGTGCTCTCCTCTTCCACAGATACCAAAAGCACCTGGGTTTGATGCTCAGACTTCTGAGCACGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CCA 72 bp | GAAGTATGTTGTGAAACTCCTCATATGATGGCTTCCTaGGACAGCAGAGAGGGAGACTGGAAGCAAGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: EVCCETPHMMAS*DSREGDWKQVW Trigger: CCAGACTTGCTTCCAGTCTCCCTCTCTGCTGTCCCAGGAAGCCATCATATGAGGAGTTTCACAACATACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CCA 72 bp | TTCCAAAGAGAAGCCACTGCTTACTGGCTTGCTCACTaGCTCATGCTCAGCCTGTTTGCTTCTATAACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FQREATAYWLAH*LMLSLFASITP Trigger: TGGGGTTATAGAAGCAAACAGGCTGAGCATGAGCCAGTGAGCAAGCCAGTAAGCAGTGGCTTCTCTTTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR-3UTR CAA 90 bp | GTGCCTTTCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTGGGACAATCTTTAGGCAAACAGAGGTaGAAAAAGGAGCCAGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: VPFTVGWAFPYQSSVGQSLGKQR*KKEPAM Trigger: CATGGCTGGCTCCTTTTTCAACCTCTGTTTGCCTAA...AGATTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTGGAGCTCTGTGCTGGCCTCAAACTCAAAATCTTCCTGCACCAATCACCCAAATGGGTGATGTCCTaGAAAATGTGGCAGAGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TVELCAGLKLKIFLHQSPKWVMS*KMWQRV Trigger: AACCCTCTGCCACATTTTCAAGGACATCACCCATTT...GGGTGATTGGTGCAGGAAGATTTTGAGTTTGAGGCCAGCACAGAGCTCCACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
||
| 3UTR GCA 72 bp | TGGGCTAGAGATCAGCATAAAGACACCACCAGGACTTaGAAACTTTATATGCCCCAGTACAGGGGAACACCA | + |
|
Preference number: 3 (lower is better) Translates to: WARDQHKDTTRT*KLYMPQYRGTP Trigger: TGGTGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCTGGTGGTGTCTTTATGCTGATCTCTAGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR GCA 72 bp | ATGCTTCTTCCAAAGAGAAGCCACTGCTTACTGGCTTaGTCACTGGCTCATGCTCAGCCTGTTTGCTTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: MLLPKRSHCLLA*SLAHAQPVCFY Trigger: ATAGAAGCAAACAGGCTGAGCATGAGCCAGTGAGCAAGCCAGTAAGCAGTGGCTTCTCTTTGGAAGAAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR-3UTR CAA 90 bp | AGTACGTGCCTTACTGGAGGGACTCTGTGGCAGCAGAAGTATGTTGTGAAACTCAGTGCTGAGTTTTACTaGGGCTTTCCAAACTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: STCLTGGTLWQQKYVVKLSAEFY*GFPNWV Trigger: AACCCAGTTTGGAAAGCCCAAGTAAAACTCAGCACT...GAGTTTCACAACATACTTCTGCTGCCACAGAGTCCCTCCAGTAAGGCACGTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTGCCTTTCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTGGGACAATCTACAGCTAATCTTTaGTATAATCACCACCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VVPFTVGWAFPYQSSVGQSTANL*YNHHLC Trigger: GCAGAGGTGGTGATTATACAAAAGATTAGCTGTAGA...TTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCACCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR TCA 72 bp | CTGAAGCTTCATGAAAAGGGGGTTTCCTTCTGGGACTaGGCCAAGAACATAGATAGAGTCATCTTTGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LKLHEKGVSFWD*AKNIDRVIFAS Trigger: GCTGGCAAAGATGACTCTATCTATGTTCTTGGCTCAGTCCCAGAAGGAAACCCCCTTTTCATGAAGCTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR TCA 72 bp | GTTTTCACGGTATGTACCAAGTCCATACCTGTGCCTTaGGTGTTCACCTGTAAGCATCAGATTAGTGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VFTVCTKSIPVP*VFTCKHQISAG Trigger: GCCTGCACTAATCTGATGCTTACAGGTGAACACTCAAGGCACAGGTATGGACTTGGTACATACCGTGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CCA 72 bp | TCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTaGGACAATCTGATCAAGGAGAATCTTTCACTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SQWVGPSHINHQ*DNLIKENLSLR Trigger: CCTCAGTGAAAGATTCTCCTTGATCAGATTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR TCA 72 bp | GAGCTCCACAGTTCCCGTGGCTTCTCCACTTTGTTTTaGTGTTATCTGAAGATTGTTCTGCCACAGTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ELHSSRGFSTLF*CYLKIVLPQFL Trigger: CAGAAACTGTGGCAGAACAATCTTCAGATAACATCAAAACAAAGTGGAGAAGCCACGGGAACTGTGGAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR GCA 72 bp | CCAGTGTTTTCACGGTATGTACCAAGTCCATACCTGTaGCTTGAGTGTTCACCTGTAAGCATCAGATTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PVFSRYVPSPYL*LECSPVSIRLV Trigger: CACTAATCTGATGCTTACAGGTGAACACTCAAGGCACAGGTATGGACTTGGTACATACCGTGAAAACACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR GCA 72 bp | AATTCTACATTTACTGACTCAGAGACAGACTGGCTCTaGAGTCTGATCTCACAAGGCTTTGGTGACCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: NSTFTDSETDWL*SLISQGFGDLD Trigger: ATCCAGGTCACCAAAGCCTTGTGAGATCAGACTGCAGAGCCAGTCTGTCTCTGAGTCAGTAAATGTAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR GCA 72 bp | GGCTGTAGAGATGGCTCAGTGGTTAAGAGAACTAGCTaGTTTTTCAGAGAACAGGGGTTTAAATCCCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: GCRDGSVVKRTS*FFREQGFKSHH Trigger: GTGATGGGATTTAAACCCCTGTTCTCTGAAAAAGCAGCTAGTTCTCTTAACCACTGAGCCATCTCTACAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CCA 72 bp | CACAGGCTTCTGAATACCAGAGCTCCACAGTTCCCGTaGCTTCTCCACTTTGTTTTGATGTTATCTGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: HRLLNTRAPQFP*LLHFVLMLSED Trigger: ATCTTCAGATAACATCAAAACAAAGTGGAGAAGCCACGGGAACTGTGGAGCTCTGGTATTCAGAAGCCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR TCA 72 bp | GTTTCTGTTCTTCAGGATGTCAAAACTGAAGCTTCATaGAAAGGGGGTTTCCTTCTGGGACTGAGCCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VSVLQDVKTEAS*KGGFLLGLSQE Trigger: TTCTTGGCTCAGTCCCAGAAGGAAACCCCCTTTTCATGAAGCTTCAGTTTTGACATCCTGAAGAACAGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR TCA 72 bp | CCAGGAACTTGTGAGAAATCCAAATTCTACATTTACTaGCTCAGAGACAGACTGGCTCTGCAGTCTGATCTC | + |
|
Preference number: 3 (lower is better) Translates to: PGTCEKSKFYIY*LRDRLALQSDL Trigger: GAGATCAGACTGCAGAGCCAGTCTGTCTCTGAGTCAGTAAATGTAGAATTTGGATTTCTCACAAGTTCCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR TCA 72 bp | AAAATAATGTCATTGGTACGTCTGGTTCTTCTCCCCTaGGAGTCTGACTTCACTGGTCTGAAGAAGTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KIMSLVRLVLLP*ESDFTGLKKSQ Trigger: CTGAGACTTCTTCAGACCAGTGAAGTCAGACTCTCAGGGGAGAAGAACCAGACGTACCAATGACATTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
||
| 3UTR CCA 72 bp | AATCCAAATTCTACATTTACTGACTCAGAGACAGACTaGCTCTGCAGTCTGATCTCACAAGGCTTTGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: NPNSTFTDSETD*LCSLISQGFGD Trigger: GTCACCAAAGCCTTGTGAGATCAGACTGCAGAGCCAGTCTGTCTCTGAGTCAGTAAATGTAGAATTTGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR TCA 72 bp | GTCTTGTCTTTGCCTTACTTATGTTCTTCATCACCGTaGCAAAGCATCAACAGAGATAGTGTAGGGAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VLSLPYLCSSSP*QSINRDSVGRR Trigger: TCTCCTCCCTACACTATCTCTGTTGATGCTTTGTCACGGTGATGAAGAACATAAGTAAGGCAAAGACAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR GCA 72 bp | GATGCTCACGTGAGTCTCCAAACTATGTCTTGTCTTTaGCTTACTTATGTTCTTCATCACCGTGACAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: DAHVSLQTMSCL*LTYVLHHRDKA Trigger: TGCTTTGTCACGGTGATGAAGAACATAAGTAAGGCAAAGACAAGACATAGTTTGGAGACTCACGTGAGCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR GCA 72 bp | ACTGAGGTTCCCTCATCCCAGATTTCTCTTAGATTGTaGCACATTTGCAATATAAGCTACCTAGAACACCAA | + |
|
Preference number: 3 (lower is better) Translates to: TEVPSSQISLRL*HICNISYLEHQ Trigger: TTGGTGTTCTAGGTAGCTTATATTGCAAATGTGGCACAATCTAAGAGAAATCTGGGATGAGGGAACCTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR-3UTR CAA 90 bp | AGCAACATTAGAGTAGAAAACACCCAACATCTTCAGAGATCACTTAGTTGTAGTAAATGTGGCAGAGGGTaGGAAAGGGAACAGAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: SNIRVENTQHLQRSLSCSKCGRG*EREQNV Trigger: AACATTCTGTTCCCTTTCCAACCCTCTGCCACATTT...ACTACAACTAAGTGATCTCTGAAGATGTTGGGTGTTTTCTACTCTAATGTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
||
| 3UTR GCA 72 bp | CCCTCATCCCAGATTTCTCTTAGATTGTGCCACATTTaGAATATAAGCTACCTAGAACACCAAAAAGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: PSSQISLRLCHI*NISYLEHQKDV Trigger: CACATCTTTTTGGTGTTCTAGGTAGCTTATATTGCAAATGTGGCACAATCTAAGAGAAATCTGGGATGAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR-3UTR CAA 90 bp | AGCAACATTAGAGTAGAAAACACCCAACATCTTCAGAGATCACTTAGTTGTAGTAAAGGGAACAGAATGTaGACTCATTGGCAGATGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SNIRVENTQHLQRSLSCSKGNRM*THWQMQ Trigger: TTGCATCTGCCAATGAGTCAACATTCTGTTCCCTTT...ACTACAACTAAGTGATCTCTGAAGATGTTGGGTGTTTTCTACTCTAATGTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
||
| 3UTR TCA 72 bp | CAACCTAAAGCTACTTTTTCTATACTATATGTTACATaGAAAGTGACCACACCATCTCAGCTCCCATCAACA | + |
|
Preference number: 3 (lower is better) Translates to: QPKATFSILYVT*KVTTPSQLPST Trigger: TGTTGATGGGAGCTGAGATGGTGTGGTCACTTTTCATGTAACATATAGTATAGAAAAAGTAGCTTTAGGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR TCA 72 bp | AACACTGTTAAACATGAGAATCTGACTCAACTCATCTaGGAGGAAATCTTACGCAAGAGATTGAACAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: NTVKHENLTQLI*EEILRKRLNKN Trigger: GTTCTTGTTCAATCTCTTGCGTAAGATTTCCTCTCAGATGAGTTGAGTCAGATTCTCATGTTTAACAGTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR TCA 90 bp | TCTATAACCCCAGTCATCCTGCCAATGGGTGGTGCCTTTCACAGTGGGTTGGGCTTTCATCTACACATGTaGGCTGGGGCTGAGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SITPVILPMGGAFHSGLGFHLHM*AGAEST Trigger: GGTGGACTCAGCCCCAGCTCACATGTGTAGATGAAA...GCCCAACCCACTGTGAAAGGCACCACCCATTGGCAGGATGACTGGGGTTATAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR CCA 90 bp | AGTACGTGCCTTACTGGAGGGACTCTGTGGCAGCAGAAGTATGTTGTGAAACTCGAGTTGCTGGTGCACTaGCAGTTGCTGCTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: STCLTGGTLWQQKYVVKLELLVH*QLLLQE Trigger: CTCCTGGAGCAGCAACTGCCAGTGCACCAGCAACTC...GAGTTTCACAACATACTTCTGCTGCCACAGAGTCCCTCCAGTAAGGCACGTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR CCA 90 bp | GTGGTGCCTTTCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTGGGACAATGTCATGGGAGTTGCTaGTGCACTGGCAGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VVPFTVGWAFPYQSSVGQCHGSC*CTGSCC Trigger: GCAGCAACTGCCAGTGCACCAGCAACTCCCATGACA...TTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR CCA 90 bp | GGGAGCTCTAGCTCAGTTTTAGAGGGTACACTACACAGTGGCCAGTACGTGCCTGTGGGAAGTCTGTGGTaGTTATGGGGCAGGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSSSSVLEGTLHSGQYVPVGSLW*LWGRKS Trigger: AGACTTCCTGCCCCATAACCACCACAGACTTCCCAC...AGGCACGTACTGGCCACTGTGTAGTGTACCCTCTAAAACTGAGCTAGAGCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CAA 72 bp | GTCATCCTGCCAATGGGTGGTGCCTTTCACAGTGGGTaGGGCCTTCCCATATCAATCATCAGTGGGACAATC | + |
|
Preference number: 4 (lower is better) Translates to: VILPMGGAFHSG*GLPISIISGTI Trigger: GATTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCACCACCCATTGGCAGGATGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR CCA 90 bp | CCTAGACACAGGCTTCTGAATACCAGAGCTCCACAGTTCCCGTGGCTTCTCCACTTTCTCGATTTGTCATaGGAGTTGCTGGTGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRHRLLNTRAPQFPWLLHFLDLS*ELLVHW Trigger: CCAGTGCACCAGCAACTCCCATGACAAATCGAGAAA...GTGGAGAAGCCACGGGAACTGTGGAGCTCTGGTATTCAGAAGCCTGTGTCTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR CCA 90 bp | AGTACGTGCCTTACTGGAGGGACTCTGTGGCAGCAGAAGTATGTTGTGAAACTCATGTTTCCAAGGAGGTaGCTCCCTGCAGTGACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: STCLTGGTLWQQKYVVKLMFPRR*LPAVTC Trigger: ACAGGTCACTGCAGGGAGCCACCTCCTTGGAAACAT...GAGTTTCACAACATACTTCTGCTGCCACAGAGTCCCTCCAGTAAGGCACGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR CCA 90 bp | GTGGTGCCTTTCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTGGGACAATTGCAGTTGTTTCTGTaGGTTGTGGGAAGTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VVPFTVGWAFPYQSSVGQLQLFL*VVGSLW Trigger: CCACAGACTTCCCACAACCCACAGAAACAACTGCAA...TTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CAA 72 bp | CATGCTTCTTCCAAAGAGAAGCCACTGCTTACTGGCTaGCTCACTGGCTCATGCTCAGCCTGTTTGCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HASSKEKPLLTG*LTGSCSACLLL Trigger: TAGAAGCAAACAGGCTGAGCATGAGCCAGTGAGCAAGCCAGTAAGCAGTGGCTTCTCTTTGGAAGAAGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR TCA 90 bp | GTGGTGCCTTTCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTGGGACAAGAATTTCTGCTTCCTTaGGATTCCTCACTAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVPFTVGWAFPYQSSVGQEFLLP*DSSLAR Trigger: TCTGGCTAGTGAGGAATCTCAAGGAAGCAGAAATTC...TTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR CCA 90 bp | GGGAGCTCTAGCTCAGTTTTAGAGGGTACACTACACAGTGGCCAGTACGTGCCTGACAACTGGGTACTATaGTTAATGAGAGAAACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSSSSVLEGTLHSGQYVPDNWVL*LMRETP Trigger: TGGGGTTTCTCTCATTAACCATAGTACCCAGTTGTC...AGGCACGTACTGGCCACTGTGTAGTGTACCCTCTAAAACTGAGCTAGAGCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR TCA 90 bp | GGGCATTATCCGAGGATGCCTGGGATATCCAGTCTACAGCTAATCTTTTGTATATGTAGGAGAGGGCTTTaGATGTGGCATTGGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: GHYPRMPGISSLQLIFCICRRGL*MWHWGP Trigger: AGGTCCCCAATGCCACATTCAAAGCCCTCTCCTACA...TATACAAAAGATTAGCTGTAGACTGGATATCCCAGGCATCCTCGGATAATGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR TCA 90 bp | GTTTTACTTGGGCTTTCCAAACTGGGTTGTAACAATGAAGTCAACCTAAAGCTAATCTGTGTTGCCAGGTaGGCCCGCTCAGGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLLGLSKLGCNNEVNLKLICVAR*ARSGGG Trigger: TCCTCCTCCTGAGCGGGCTCACCTGGCAACACAGAT...TAGCTTTAGGTTGACTTCATTGTTACAACCCAGTTTGGAAAGCCCAAGTAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR GCA 90 bp | GTGGTGCCTTTCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTGGGACAATTCGGAAACCTCTCTTaGATTCACAGTTTAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VVPFTVGWAFPYQSSVGQFGNLS*IHSLGW Trigger: CCATCCTAAACTGTGAATGCAAGAGAGGTTTCCGAA...TTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR GCA 90 bp | AGTACGTGCCTTACTGGAGGGACTCTGTGGCAGCAGAAGTATGTTGTGAAACTCGTAAGGTTCTCTTGGTaGATAGACTGTGTTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: STCLTGGTLWQQKYVVKLVRFSW*IDCVGF Trigger: GAAGCCAACACAGTCTATGCACCAAGAGAACCTTAC...GAGTTTCACAACATACTTCTGCTGCCACAGAGTCCCTCCAGTAAGGCACGTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR GCA 90 bp | AGTACGTGCCTTACTGGAGGGACTCTGTGGCAGCAGAAGTATGTTGTGAAACTCCGGGAGAAGAATTTCTaGTTCCTTGAGATTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: STCLTGGTLWQQKYVVKLREKNF*FLEIPH Trigger: GTGAGGAATCTCAAGGAAGCAGAAATTCTTCTCCCG...GAGTTTCACAACATACTTCTGCTGCCACAGAGTCCCTCCAGTAAGGCACGTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR CCA 90 bp | AGTACGTGCCTTACTGGAGGGACTCTGTGGCAGCAGAAGTATGTTGTGAAACTCTGTTTCTGTGGGTTGTaGGAAGTCTGTGGTGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: STCLTGGTLWQQKYVVKLCFCGL*EVCGGY Trigger: ATAACCACCACAGACTTCCCACAACCCACAGAAACA...GAGTTTCACAACATACTTCTGCTGCCACAGAGTCCCTCCAGTAAGGCACGTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR GCA 90 bp | GTGGTGCCTTTCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTGGGACAATCTGTTGTGGTTTGTTaGTCTTTCTGGTGTTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VVPFTVGWAFPYQSSVGQSVVVC*SFWCSS Trigger: ACTTGAACACCAGAAAGAGCAACAAACCACAACAGA...TTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCACCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR CCA 90 bp | CAAAATCTTCCTGCACCAATCACCCAAGTGCAAGCAAGGGTCACAGCGATGTACGACAACTGGGTACTATaGTTAATGAGAGAAACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QNLPAPITQVQARVTAMYDNWVL*LMRETP Trigger: TGGGGTTTCTCTCATTAACCATAGTACCCAGTTGTC...GTACATCGCTGTGACCCTTGCTTGCACTTGGGTGATTGGTGCAGGAAGATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
||
| 3UTR CAA 72 bp | GGCAGAGGGTTGGAAAGGGAACAGAATGTTGACTCATaGGCAGATGCAAGTTTTCCCTTAGCAGTCTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GRGLEREQNVDS*ADASFPLAVFL Trigger: TAGGAAGACTGCTAAGGGAAAACTTGCATCTGCCAATGAGTCAACATTCTGTTCCCTTTCCAACCCTCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
||
| 3UTR CAA 72 bp | AGCATCAGATTAGTGCAGGCTAAATTGAGCGTACAATaGACAGCTGTCCCAAAGAAACCAGCGCTTAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SIRLVQAKLSVQ*TAVPKKPALRV Trigger: CACTCTAAGCGCTGGTTTCTTTGGGACAGCTGTCAATTGTACGCTCAATTTAGCCTGCACTAATCTGATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR GCA 90 bp | GGGCATTATCCGAGGATGCCTGGGATATCCAGTCTACAGCTAATCTTTTGTATAGACTGTGTTGGCTTCTaGATGTCTGTTGTGGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GHYPRMPGISSLQLIFCIDCVGF*MSVVVC Trigger: ACAAACCACAACAGACATGCAGAAGCCAACACAGTC...TATACAAAAGATTAGCTGTAGACTGGATATCCCAGGCATCCTCGGATAATGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CAA 72 bp | AGAGCTCCACAGTTCCCGTGGCTTCTCCACTTTGTTTaGATGTTATCTGAAGATTGTTCTGCCACAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RAPQFPWLLHFV*MLSEDCSATVS Trigger: AGAAACTGTGGCAGAACAATCTTCAGATAACATCAAAACAAAGTGGAGAAGCCACGGGAACTGTGGAGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CAA 72 bp | GAGGATGCCTGGGATATCCAGTCTACAGCTAATCTTTaGTATAATCACCACCTCTGCTTCCTTTTTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EDAWDIQSTANL*YNHHLCFLFPS Trigger: GGAAGGAAAAAGGAAGCAGAGGTGGTGATTATACAAAAGATTAGCTGTAGACTGGATATCCCAGGCATCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CAA 72 bp | CTTAGTTGTAGTTTTCCCTGCAAATGGGTGATGTCCTaGAAAATGTGGCAGAGGGTTGGAAAGGGAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSCSFPCKWVMS*KMWQRVGKGTE Trigger: TTCTGTTCCCTTTCCAACCCTCTGCCACATTTTCAAGGACATCACCCATTTGCAGGGAAAACTACAACTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
||
| 3UTR CAA 72 bp | CCACAGACAGCTCCCGGTGAGACCTGCGTTGTCTTGTaGATAAAGGCAAAATCTAGAATGACCATAAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: PQTAPGETCVVL*IKAKSRMTIKS Trigger: TGATTTTATGGTCATTCTAGATTTTGCCTTTATCAACAAGACAACGCAGGTCTCACCGGGAGCTGTCTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
||
| CDS-3UTR GCA 90 bp | TATCTGAAGATTGTTCTGCCACAGTTTCTGTTCTTCAGGATGTCAAAACTGAAGATTTGTCATGGGAGTTaGTGGTGCACTGGCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YLKIVLPQFLFFRMSKLKICHGS*WCTGSC Trigger: GCAACTGCCAGTGCACCAGCAACTCCCATGACAAAT...CTTCAGTTTTGACATCCTGAAGAACAGAAACTGTGGCAGAACAATCTTCAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CAA 72 bp | ATTCCACAGACAGCTCCCGGTGAGACCTGCGTTGTCTaGTTGATAAAGGCAAAATCTAGAATGACCATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IPQTAPGETCVV*LIKAKSRMTIK Trigger: TTTTATGGTCATTCTAGATTTTGCCTTTATCAACAAGACAACGCAGGTCTCACCGGGAGCTGTCTGTGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
||
| CDS-3UTR TCA 90 bp | TATCTGAAGATTGTTCTGCCACAGTTTCTGTTCTTCAGGATGTCAAAACTGAAGCCTTATACTCCATTGTaGGCACAAATGTCTCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLKIVLPQFLFFRMSKLKPYTPL*AQMSPS Trigger: TGACGGAGACATTTGTGCTCACAATGGAGTATAAGG...CTTCAGTTTTGACATCCTGAAGAACAGAAACTGTGGCAGAACAATCTTCAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR TCA 90 bp | GAGACCTGCGTTGTCTTGTTGATAAAGGCAAAATCTAGAATGACCATAAAATCATATAATCCTAATGCATaGATGGCTGGCTGCCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: ETCVVLLIKAKSRMTIKSYNPNA*MAGCPT Trigger: TGTCGGGCAGCCAGCCATTCATGCATTAGGATTATA...TGATTTTATGGTCATTCTAGATTTTGCCTTTATCAACAAGACAACGCAGGTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
||
| CDS-3UTR CCA 90 bp | TATCTGAAGATTGTTCTGCCACAGTTTCTGTTCTTCAGGATGTCAAAACTGAAGGTGCATAGACTGTGTTaGCTTCTGCATGTCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YLKIVLPQFLFFRMSKLKVHRLC*LLHVCC Trigger: ACAACAGACATGCAGAAGCCAACACAGTCTATGCAC...CTTCAGTTTTGACATCCTGAAGAACAGAAACTGTGGCAGAACAATCTTCAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR CCA 90 bp | GTTTTACTTGGGCTTTCCAAACTGGGTTGTAACAATGAAGTCAACCTAAAGCTATCTGCATGTCTGTTGTaGTTTGTTGCTCTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLLGLSKLGCNNEVNLKLSACLL*FVALSG Trigger: ACCAGAAAGAGCAACAAACCACAACAGACATGCAGA...TAGCTTTAGGTTGACTTCATTGTTACAACCCAGTTTGGAAAGCCCAAGTAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CAA 72 bp | GGAGGAGGAATTATTTACATTAGTGCTGAGTTTTACTaGGGCTTTCCAAACTGGGTTGTAACAATGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGGIIYISAEFY*GFPNWVVTMKS Trigger: TGACTTCATTGTTACAACCCAGTTTGGAAAGCCCAAGTAAAACTCAGCACTAATGTAAATAATTCCTCCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| 3UTR CAA 72 bp | TATTCTTCAATGGCAAAGTCCAGTTTAGTGATAGAGTaGCTGTTATGTCCTGTGACTTCAGAATGTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: YSSMAKSSLVIE*LLCPVTSECSR Trigger: TCTAGAACATTCTGAAGTCACAGGACATAACAGCAACTCTATCACTAAACTGGACTTTGCCATTGAAGAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR CAA 90 bp | GTGGTGCCTTTCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTGGGACAACTTCCTCCATCTGTGTaGCCAGGTGAGCCCGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VVPFTVGWAFPYQSSVGQLPPSV*PGEPAQ Trigger: CTGAGCGGGCTCACCTGGCAACACAGATGGAGGAAG...TTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS-3UTR CAA 90 bp | GTGGTGCCTTTCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTGGGACAACTGGTGCACTGGCAGTaGCTGCTCCAGGAGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VVPFTVGWAFPYQSSVGQLVHWQ*LLQEFP Trigger: AGGAAACTCCTGGAGCAGCAACTGCCAGTGCACCAG...TTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS CCA 90 bp | GTTCTTGTAGGAGAGGGCTTTGAATGTGGCATTGGGGACCTCGGGTaGGTCATACAGACACAGTTCTGCCCGACAACTGGGTACTATGGT | + |
|
Preference number: 5 (lower is better) Translates to: VLVGEGFECGIGDLG*VIQTQFCPTTGYYG Trigger: ACCATAGTACCCAGTTGTCGGGCAGAACTGTGTCTGTATGACCCACCCGAGGTCCCCAATGCCACATTCAAAGCCCTCTCCTACAAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS CCA 90 bp | TGTGAGCACAAATGTCTCCGTCATTGCAGTTGTTTCTGTGGGTTGTaGGAAGTCTGTGGTGGTTATGGGGCAGGAAGTCTCACTCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: CEHKCLRHCSCFCGL*EVCGGYGAGSLTLG Trigger: CCCGAGAGTGAGACTTCCTGCCCCATAACCACCACAGACTTCCCACAACCCACAGAAACAACTGCAATGACGGAGACATTTGTGCTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS TCA 90 bp | TGCATTCACAGTTTAGGATGGTGCCGTTCTTGTAGGAGAGGGCTTTaGATGTGGCATTGGGGACCTCGGGTGGGTCATACAGACACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: CIHSLGWCRSCRRGL*MWHWGPRVGHTDTV Trigger: AACTGTGTCTGTATGACCCACCCGAGGTCCCCAATGCCACATTCAAAGCCCTCTCCTACAAGAACGGCACCATCCTAAACTGTGAATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS CCA 90 bp | TCTCCGTCATTGCAGTTGTTTCTGTGGGTTGTGGGAAGTCTGTGGTaGTTATGGGGCAGGAAGTCTCACTCTCGGGAGAAGAATTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPSLQLFLWVVGSLW*LWGRKSHSREKNFC Trigger: GCAGAAATTCTTCTCCCGAGAGTGAGACTTCCTGCCCCATAACCACCACAGACTTCCCACAACCCACAGAAACAACTGCAATGACGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS CCA 90 bp | ATGTCTCCGTCATTGCAGTTGTTTCTGTGGGTTGTGGGAAGTCTGTaGTGGTTATGGGGCAGGAAGTCTCACTCTCGGGAGAAGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: MSPSLQLFLWVVGSL*WLWGRKSHSREKNF Trigger: GAAATTCTTCTCCCGAGAGTGAGACTTCCTGCCCCATAACCACCACAGACTTCCCACAACCCACAGAAACAACTGCAATGACGGAGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS GCA 90 bp | CTTGCTTTCTCGATTTGTCATGGGAGTTGCTGGTGCACTGGCAGTTaGTGCTCCAGGAGTTTCCTAAGCAACGCATATAGACCAATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LAFSICHGSCWCTGS*CSRSFLSNAYRPIP Trigger: AGGAATTGGTCTATATGCGTTGCTTAGGAAACTCCTGGAGCAGCAACTGCCAGTGCACCAGCAACTCCCATGACAAATCGAGAAAGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
||
| CDS CCA 90 bp | CTCCCTGCAGTGACCTGTAAGGTTCTCTTGGTGCATAGACTGTGTTaGCTTCTGCATGTCTGTTGTGGTTTGTTGCTCTTTCTGGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPAVTCKVLLVHRLC*LLHVCCGLLLFLVF Trigger: GAACACCAGAAAGAGCAACAAACCACAACAGACATGCAGAAGCCAACACAGTCTATGCACCAAGAGAACCTTACAGGTCACTGCAGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS TCA 90 bp | ATGGGGCAGGAAGTCTCACTCTCGGGAGAAGAATTTCTGCTTCCTTaGGATTCCTCACTAGCCAGAAATCGGTGGTGTTCTCTTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: MGQEVSLSGEEFLLP*DSSLARNRWCSLSS Trigger: AGATGAAAGAGAACACCACCGATTTCTGGCTAGTGAGGAATCTCAAGGAAGCAGAAATTCTTCTCCCGAGAGTGAGACTTCCTGCCCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS GCA 90 bp | GCTTTCTCGATTTGTCATGGGAGTTGCTGGTGCACTGGCAGTTGCTaGTCCAGGAGTTTCCTAAGCAACGCATATAGACCAATTCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: AFSICHGSCWCTGSC*SRSFLSNAYRPIPL Trigger: TAAAGGAATTGGTCTATATGCGTTGCTTAGGAAACTCCTGGAGCAGCAACTGCCAGTGCACCAGCAACTCCCATGACAAATCGAGAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS CCA 90 bp | ACTCGTAGTGAACACTCTGTCCTTCCACGAAATGATAGATTCTCTTaGAATCTTCATGTTTCCAAGGAGGTGGCTCCCTGCAGTGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: TRSEHSVLPRNDRFS*NLHVSKEVAPCSDL Trigger: CAGGTCACTGCAGGGAGCCACCTCCTTGGAAACATGAAGATTCCAAGAGAATCTATCATTTCGTGGAAGGACAGAGTGTTCACTACGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS-3UTR CAA 90 bp | GTGCCTTTCACAGTGGGTTGGGCCTTCCCATATCAATCATCAGTGGGACAATCTGTCTGTTGTGGTTTGTaGCTCTTTCTGGTGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VPFTVGWAFPYQSSVGQSVCCGL*LFLVFK Trigger: CTTGAACACCAGAAAGAGCAACAAACCACAACAGAC...AGATTGTCCCACTGATGATTGATATGGGAAGGCCCAACCCACTGTGAAAGGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS CCA 90 bp | CACGAAATGATAGATTCTCTTGGAATCTTCATGTTTCCAAGGAGGTaGCTCCCTGCAGTGACCTGTAAGGTTCTCTTGGTGCATAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: HEMIDSLGIFMFPRR*LPAVTCKVLLVHRL Trigger: CAGTCTATGCACCAAGAGAACCTTACAGGTCACTGCAGGGAGCCACCTCCTTGGAAACATGAAGATTCCAAGAGAATCTATCATTTCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS-3UTR CAA 90 bp | TATCTGAAGATTGTTCTGCCACAGTTTCTGTTCTTCAGGATGTCAAAACTGAAGGCTTTGAATGTGGCATaGGGGACCTCGGGTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: YLKIVLPQFLFFRMSKLKALNVA*GTSGGS Trigger: TGACCCACCCGAGGTCCCCAATGCCACATTCAAAGC...CTTCAGTTTTGACATCCTGAAGAACAGAAACTGTGGCAGAACAATCTTCAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS GCA 90 bp | AGCAACGCATATAGACCAATTCCTTTAGTCTTCGGAAACCTCTCTTaGATTCACAGTTTAGGATGGTGCCGTTCTTGTAGGAGAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SNAYRPIPLVFGNLS*IHSLGWCRSCRRGL Trigger: AAGCCCTCTCCTACAAGAACGGCACCATCCTAAACTGTGAATGCAAGAGAGGTTTCCGAAGACTAAAGGAATTGGTCTATATGCGTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS-3UTR CAA 90 bp | TATCTGAAGATTGTTCTGCCACAGTTTCTGTTCTTCAGGATGTCAAAACTGAAGGATTTGTCATGGGAGTaGCTGGTGCACTGGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YLKIVLPQFLFFRMSKLKDLSWE*LVHWQL Trigger: CAACTGCCAGTGCACCAGCAACTCCCATGACAAATC...CTTCAGTTTTGACATCCTGAAGAACAGAAACTGTGGCAGAACAATCTTCAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS-3UTR CAA 90 bp | AAACACACAGAGCACTGTTGGGCCCTCTCTCCCATTAAAGCTTTAGAACTGCTGAAGTTGAGCTGTAACTaGCTTTCTCGATTTGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: KHTEHCWALSPIKALELLKLSCN*LSRFVM Trigger: CATGACAAATCGAGAAAGCAAGTTACAGCTCAACTT...CAGCAGTTCTAAAGCTTTAATGGGAGAGAGGGCCCAACAGTGCTCTGTGTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS-3UTR CAA 90 bp | GTTTTACTTGGGCTTTCCAAACTGGGTTGTAACAATGAAGTCAACCTAAAGCTATCTCCGTCATTGCAGTaGTTTCTGTGGGTTGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VLLGLSKLGCNNEVNLKLSPSLQ*FLWVVG Trigger: TCCCACAACCCACAGAAACAACTGCAATGACGGAGA...TAGCTTTAGGTTGACTTCATTGTTACAACCCAGTTTGGAAAGCCCAAGTAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS-3UTR CAA 90 bp | TATCTGAAGATTGTTCTGCCACAGTTTCTGTTCTTCAGGATGTCAAAACTGAAGACTTGCTTTCTCGATTaGTCATGGGAGTTGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YLKIVLPQFLFFRMSKLKTCFLD*SWELLV Trigger: CACCAGCAACTCCCATGACAAATCGAGAAAGCAAGT...CTTCAGTTTTGACATCCTGAAGAACAGAAACTGTGGCAGAACAATCTTCAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS-3UTR CAA 90 bp | TATCTGAAGATTGTTCTGCCACAGTTTCTGTTCTTCAGGATGTCAAAACTGAAGCTTCGGAAACCTCTCTaGCATTCACAGTTTAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: YLKIVLPQFLFFRMSKLKLRKPL*HSQFRM Trigger: CATCCTAAACTGTGAATGCAAGAGAGGTTTCCGAAG...CTTCAGTTTTGACATCCTGAAGAACAGAAACTGTGGCAGAACAATCTTCAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS-3UTR CAA 90 bp | TATCTGAAGATTGTTCTGCCACAGTTTCTGTTCTTCAGGATGTCAAAACTGAAGCATGTCTGTTGTGGTTaGTTGCTCTTTCTGGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: YLKIVLPQFLFFRMSKLKHVCCG*LLFLVF Trigger: GAACACCAGAAAGAGCAACAAACCACAACAGACATG...CTTCAGTTTTGACATCCTGAAGAACAGAAACTGTGGCAGAACAATCTTCAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS-3UTR CAA 90 bp | AAAGATCTGGTTCATACTTGGTCACATAAAAGACTCAAAATGGCTCTGTCTGACAGAATTTCTGCTTCCTaGAGATTCCTCACTAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KDLVHTWSHKRLKMALSDRISAS*RFLTSQ Trigger: CTGGCTAGTGAGGAATCTCAAGGAAGCAGAAATTCT...GTCAGACAGAGCCATTTTGAGTCTTTTATGTGACCAAGTATGAACCAGATCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS CCA 72 bp | GGAGAGGGCTTTGAATGTGGCATTGGGGACCTCGGGTaGGTCATACAGACACAGTTCTGCCCGACAACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GEGFECGIGDLG*VIQTQFCPTTG Trigger: CCCAGTTGTCGGGCAGAACTGTGTCTGTATGACCCACCCGAGGTCCCCAATGCCACATTCAAAGCCCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS CCA 72 bp | TGCTTTCTCGATTTGTCATGGGAGTTGCTGGTGCACTaGCAGTTGCTGCTCCAGGAGTTTCCTAAGCAACGC | + |
|
Preference number: 6 (lower is better) Translates to: CFLDLSWELLVH*QLLLQEFPKQR Trigger: GCGTTGCTTAGGAAACTCCTGGAGCAGCAACTGCCAGTGCACCAGCAACTCCCATGACAAATCGAGAAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS CCA 72 bp | TCATTGCAGTTGTTTCTGTGGGTTGTGGGAAGTCTGTaGTGGTTATGGGGCAGGAAGTCTCACTCTCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLQLFLWVVGSL*WLWGRKSHSRE Trigger: CTCCCGAGAGTGAGACTTCCTGCCCCATAACCACCACAGACTTCCCACAACCCACAGAAACAACTGCAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS CCA 72 bp | TGCATGAATGGCTGGCTGCCCGACAACTGGGTACTATaGTTAATGAGAGAAACCCCAACATCAGCAAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: CMNGWLPDNWVL*LMRETPTSASV Trigger: CACGCTTGCTGATGTTGGGGTTTCTCTCATTAACCATAGTACCCAGTTGTCGGGCAGCCAGCCATTCATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
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| CDS CAA 90 bp | ATGTTTCCAAGGAGGTGGCTCCCTGCAGTGACCTGTAAGGTTCTCTaGGTGCATAGACTGTGTTGGCTTCTGCATGTCTGTTGTGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: MFPRRWLPAVTCKVL*VHRLCWLLHVCCGL Trigger: CAAACCACAACAGACATGCAGAAGCCAACACAGTCTATGCACCAAGAGAACCTTACAGGTCACTGCAGGGAGCCACCTCCTTGGAAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS CAA 90 bp | CATTGTGAGCACAAATGTCTCCGTCATTGCAGTTGTTTCTGTGGGTaGTGGGAAGTCTGTGGTGGTTATGGGGCAGGAAGTCTCACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: HCEHKCLRHCSCFCG*WEVCGGYGAGSLTL Trigger: GAGAGTGAGACTTCCTGCCCCATAACCACCACAGACTTCCCACAACCCACAGAAACAACTGCAATGACGGAGACATTTGTGCTCACAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS GCA 72 bp | ATTTGTCATGGGAGTTGCTGGTGCACTGGCAGTTGCTaGTCCAGGAGTTTCCTAAGCAACGCATATAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: ICHGSCWCTGSC*SRSFLSNAYRP Trigger: TGGTCTATATGCGTTGCTTAGGAAACTCCTGGAGCAGCAACTGCCAGTGCACCAGCAACTCCCATGACAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS GCA 72 bp | TCGATTTGTCATGGGAGTTGCTGGTGCACTGGCAGTTaGTGCTCCAGGAGTTTCCTAAGCAACGCATATAGA | + |
|
Preference number: 6 (lower is better) Translates to: SICHGSCWCTGS*CSRSFLSNAYR Trigger: TCTATATGCGTTGCTTAGGAAACTCCTGGAGCAGCAACTGCCAGTGCACCAGCAACTCCCATGACAAATCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS CCA 72 bp | TTGTTTCTGTGGGTTGTGGGAAGTCTGTGGTGGTTATaGGGCAGGAAGTCTCACTCTCGGGAGAAGAATTTC | + |
|
Preference number: 6 (lower is better) Translates to: LFLWVVGSLWWL*GRKSHSREKNF Trigger: GAAATTCTTCTCCCGAGAGTGAGACTTCCTGCCCCATAACCACCACAGACTTCCCACAACCCACAGAAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS CCA 72 bp | AAATGTCTCCGTCATTGCAGTTGTTTCTGTGGGTTGTaGGAAGTCTGTGGTGGTTATGGGGCAGGAAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: KCLRHCSCFCGL*EVCGGYGAGSL Trigger: GAGACTTCCTGCCCCATAACCACCACAGACTTCCCACAACCCACAGAAACAACTGCAATGACGGAGACATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS TCA 72 bp | GAATCTTCATGTTTCCAAGGAGGTGGCTCCCTGCAGTaGCCTGTAAGGTTCTCTTGGTGCATAGACTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: ESSCFQGGGSLQ*PVRFSWCIDCV Trigger: AACACAGTCTATGCACCAAGAGAACCTTACAGGTCACTGCAGGGAGCCACCTCCTTGGAAACATGAAGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS TCA 72 bp | AGAGGCAGCTGGCCACTGCTACCTTATACTCCATTGTaGGCACAAATGTCTCCGTCATTGCAGTTGTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RGSWPLLPYTPL*AQMSPSLQLFL Trigger: CAGAAACAACTGCAATGACGGAGACATTTGTGCTCACAATGGAGTATAAGGTAGCAGTGGCCAGCTGCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS CCA 72 bp | CATACAGACACAGTTCTGCCCGACAACTGGGTACTATaGTTAATGAGAGAAACCCCAACATCAGCAAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: HTDTVLPDNWVL*LMRETPTSASV Trigger: CACGCTTGCTGATGTTGGGGTTTCTCTCATTAACCATAGTACCCAGTTGTCGGGCAGAACTGTGTCTGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS CAA 90 bp | TATGGGGCAGGAAGTCTCACTCTCGGGAGAAGAATTTCTGCTTCCTaGAGATTCCTCACTAGCCAGAAATCGGTGGTGTTCTCTTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: YGAGSLTLGRRISAS*RFLTSQKSVVFSFI Trigger: GATGAAAGAGAACACCACCGATTTCTGGCTAGTGAGGAATCTCAAGGAAGCAGAAATTCTTCTCCCGAGAGTGAGACTTCCTGCCCCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS TCA 72 bp | GAAGTCTCACTCTCGGGAGAAGAATTTCTGCTTCCTTaGGATTCCTCACTAGCCAGAAATCGGTGGTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EVSLSGEEFLLP*DSSLARNRWCS Trigger: AGAACACCACCGATTTCTGGCTAGTGAGGAATCTCAAGGAAGCAGAAATTCTTCTCCCGAGAGTGAGACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS TCA 72 bp | GACTGTACCTTTATCCACCTCTATAATCCTAATGCATaGATGGCTGGCTGCCCGACAACTGGGTACTATGGT | + |
|
Preference number: 6 (lower is better) Translates to: DCTFIHLYNPNA*MAGCPTTGYYG Trigger: ACCATAGTACCCAGTTGTCGGGCAGCCAGCCATTCATGCATTAGGATTATAGAGGTGGATAAAGGTACAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
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| CDS CAA 90 bp | TGTTGTGGTTTGTTGCTCTTTCTGGTGTTCAAGTTGAGCTGTAACTaGCTTTCTCGATTTGTCATGGGAGTTGCTGGTGCACTGGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: CCGLLLFLVFKLSCN*LSRFVMGVAGALAV Trigger: AACTGCCAGTGCACCAGCAACTCCCATGACAAATCGAGAAAGCAAGTTACAGCTCAACTTGAACACCAGAAAGAGCAACAAACCACAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS GCA 72 bp | GTAAGGTTCTCTTGGTGCATAGACTGTGTTGGCTTCTaGATGTCTGTTGTGGTTTGTTGCTCTTTCTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: VRFSWCIDCVGF*MSVVVCCSFWC Trigger: ACACCAGAAAGAGCAACAAACCACAACAGACATGCAGAAGCCAACACAGTCTATGCACCAAGAGAACCTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS CCA 72 bp | GTGACCTGTAAGGTTCTCTTGGTGCATAGACTGTGTTaGCTTCTGCATGTCTGTTGTGGTTTGTTGCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: VTCKVLLVHRLC*LLHVCCGLLLF Trigger: AAAGAGCAACAAACCACAACAGACATGCAGAAGCCAACACAGTCTATGCACCAAGAGAACCTTACAGGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS CAA 90 bp | CTTCTGCATGTCTGTTGTGGTTTGTTGCTCTTTCTGGTGTTCAAGTaGAGCTGTAACTTGCTTTCTCGATTTGTCATGGGAGTTGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LLHVCCGLLLFLVFK*SCNLLSRFVMGVAG Trigger: ACCAGCAACTCCCATGACAAATCGAGAAAGCAAGTTACAGCTCAACTTGAACACCAGAAAGAGCAACAAACCACAACAGACATGCAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS CCA 72 bp | GTACCTTTATCCACCTCTATAATCCTAATGCATGAATaGCTGGCTGCCCGACAACTGGGTACTATGGTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: VPLSTSIILMHE*LAARQLGTMVN Trigger: ATTAACCATAGTACCCAGTTGTCGGGCAGCCAGCCATTCATGCATTAGGATTATAGAGGTGGATAAAGGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150890.3 |
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| CDS CAA 72 bp | TTGTTGCTCTTTCTGGTGTTCAAGTTGAGCTGTAACTaGCTTTCTCGATTTGTCATGGGAGTTGCTGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLFLVFKLSCN*LSRFVMGVAGA Trigger: TGCACCAGCAACTCCCATGACAAATCGAGAAAGCAAGTTACAGCTCAACTTGAACACCAGAAAGAGCAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS CAA 72 bp | AGACTGTGTTGGCTTCTGCATGTCTGTTGTGGTTTGTaGCTCTTTCTGGTGTTCAAGTTGAGCTGTAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: RLCWLLHVCCGL*LFLVFKLSCNL Trigger: CAAGTTACAGCTCAACTTGAACACCAGAAAGAGCAACAAACCACAACAGACATGCAGAAGCCAACACAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS CAA 72 bp | CATAGACTGTGTTGGCTTCTGCATGTCTGTTGTGGTTaGTTGCTCTTTCTGGTGTTCAAGTTGAGCTGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: HRLCWLLHVCCG*LLFLVFKLSCN Trigger: GTTACAGCTCAACTTGAACACCAGAAAGAGCAACAAACCACAACAGACATGCAGAAGCCAACACAGTCTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS TCA 72 bp | TCTGTTGTGGTTTGTTGCTCTTTCTGGTGTTCAAGTTaGGCTGTAACTTGCTTTCTCGATTTGTCATGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SVVVCCSFWCSS*AVTCFLDLSWE Trigger: CTCCCATGACAAATCGAGAAAGCAAGTTACAGCTCAACTTGAACACCAGAAAGAGCAACAAACCACAACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS GCA 72 bp | TATAGACCAATTCCTTTAGTCTTCGGAAACCTCTCTTaGATTCACAGTTTAGGATGGTGCCGTTCTTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: YRPIPLVFGNLS*IHSLGWCRSCR Trigger: CCTACAAGAACGGCACCATCCTAAACTGTGAATGCAAGAGAGGTTTCCGAAGACTAAAGGAATTGGTCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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| CDS CAA 72 bp | GTCTGTTGTGGTTTGTTGCTCTTTCTGGTGTTCAAGTaGAGCTGTAACTTGCTTTCTCGATTTGTCATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: VCCGLLLFLVFK*SCNLLSRFVMG Trigger: TCCCATGACAAATCGAGAAAGCAAGTTACAGCTCAACTTGAACACCAGAAAGAGCAACAAACCACAACAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028111.6 |
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