Pregenerated sensors for IL27RA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005465Ensembl transcript IDs: ENSMUST00000005601.9
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTGGACCTGGAGTTACAGGTGATTCTGAGCTGCCCTGTGGGTGCTaGAAACTGAACGTGTGTCCTTTGCAAGGGCAGGGAACCAAACTT | + |
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Preference number: 1 (lower is better) Translates to: LGPGVTGDSELPCGC*KLNVCPLQGQGTKL Trigger: AAGTTTGGTTCCCTGCCCTTGCAAAGGACACACGTTCAGTTTCCAGCACCCACAGGGCAGCTCAGAATCACCTGTAACTCCAGGTCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| 3UTR TCA 90 bp | TCATTTCTTCTCAGTCCTTGGAAGGCAAAACCAGGTGAGTCTTGGTaGGTTCCAGGCCAGCCTGGTTGTTATATCAAGTTCCAGGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: SFLLSPWKAKPGESW*VPGQPGCYIKFQAS Trigger: GCTGGCCTGGAACTTGATATAACAACCAGGCTGGCCTGGAACTCACCAAGACTCACCTGGTTTTGCCTTCCAAGGACTGAGAAGAAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| 3UTR TCA 90 bp | GGCGGCACACTCATTTCTTCTCAGTCCTTGGAAGGCAAAACCAGGTaGGTCTTGGTGAGTTCCAGGCCAGCCTGGTTGTTATATCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: GGTLISSQSLEGKTR*VLVSSRPAWLLYQV Trigger: AACTTGATATAACAACCAGGCTGGCCTGGAACTCACCAAGACTCACCTGGTTTTGCCTTCCAAGGACTGAGAAGAAATGAGTGTGCCGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| 3UTR GCA 90 bp | GAACGTGTGTCCTTTGCAAGGGCAGGGAACCAAACTTTGGTCTACTaGAAGAAAACACAGGCTCTTAACCACTTCAGGCCCTTGAATGTG | + |
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Preference number: 1 (lower is better) Translates to: ERVSFARAGNQTLVY*KKTQALNHFRPLNV Trigger: CACATTCAAGGGCCTGAAGTGGTTAAGAGCCTGTGTTTTCTTGCAGTAGACCAAAGTTTGGTTCCCTGCCCTTGCAAAGGACACACGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGGGGATGCTGCAGCAGGGAGGATCACAAGTTCGAGGCCAGCCTTGGCTACCAGGTGAGTCTTGGTaGGTTCCAGGCCAGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: ALGMLQQGGSQVRGQPWLPGESW*VPGQPG Trigger: ACCAGGCTGGCCTGGAACTCACCAAGACTCACCTGG...TAGCCAAGGCTGGCCTCGAACTTGTGATCCTCCCTGCTGCAGCATCCCCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| 3UTR-3UTR TCA 90 bp | CCCAGAGGCAAGGAAAGCAAAAGCTGGTTGGGCGGGAGGCGGCACACTCATTTCGAAGGCAAAACCAGGTaGGTCTTGGTGAGTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PRGKESKSWLGGRRHTHFEGKTR*VLVSSR Trigger: CCTGGAACTCACCAAGACTCACCTGGTTTTGCCTTC...GAAATGAGTGTGCCGCCTCCCGCCCAACCAGCTTTTGCTTTCCTTGCCTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| 3UTR-3UTR GCA 90 bp | ACCATGTGTGTGCAGGGCTCACAGAAGCCAGAAGAGGGCATTGGATTCCTTGGACAGCTCTGGGGATGCTaGAGCAGGGAGGATCACAAG | + |
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Preference number: 2 (lower is better) Translates to: TMCVQGSQKPEEGIGFLGQLWGC*SREDHK Trigger: CTTGTGATCCTCCCTGCTGCAGCATCCCCAGAGCTG...TCCAAGGAATCCAATGCCCTCTTCTGGCTTCTGTGAGCCCTGCACACACATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| 3UTR CAA 90 bp | ACAAACAGATGCCCAAGACCCAGAGGCAAGGAAAGCAAAAGCTGGTaGGGCGGGAGGCGGCACACTCATTTCTTCTCAGTCCTTGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: TNRCPRPRGKESKSW*GGRRHTHFFSVLGR Trigger: CCTTCCAAGGACTGAGAAGAAATGAGTGTGCCGCCTCCCGCCCAACCAGCTTTTGCTTTCCTTGCCTCTGGGTCTTGGGCATCTGTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| 3UTR CAA 90 bp | GATTCTGAGCTGCCCTGTGGGTGCTGGAAACTGAACGTGTGTCCTTaGCAAGGGCAGGGAACCAAACTTTGGTCTACTGCAAGAAAACAC | + |
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Preference number: 2 (lower is better) Translates to: DSELPCGCWKLNVCP*QGQGTKLWSTARKH Trigger: GTGTTTTCTTGCAGTAGACCAAAGTTTGGTTCCCTGCCCTTGCAAAGGACACACGTTCAGTTTCCAGCACCCACAGGGCAGCTCAGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| 3UTR-3UTR TCA 90 bp | ACCATGTGTGTGCAGGGCTCACAGAAGCCAGAAGAGGGCATTGGATTCCTTGGATATGACTCGATGAAGTaGCGCACACCTGTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: TMCVQGSQKPEEGIGFLGYDSMK*RTPVIP Trigger: TGGGATTACAGGTGTGCGTCACTTCATCGAGTCATA...TCCAAGGAATCCAATGCCCTCTTCTGGCTTCTGTGAGCCCTGCACACACATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| 3UTR-3UTR GCA 90 bp | TTGGATTCCTTGGACCTGGAGTTACAGGTGATTCTGAGCTGCCCTGTGGGTGCTCAAACTTTGGTCTACTaGAAGAAAACACAGGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: LDSLDLELQVILSCPVGAQTLVY*KKTQAL Trigger: AAGAGCCTGTGTTTTCTTGCAGTAGACCAAAGTTTG...AGCACCCACAGGGCAGCTCAGAATCACCTGTAACTCCAGGTCCAAGGAATCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| 3UTR CCA 72 bp | GGAGTTACAGGTGATTCTGAGCTGCCCTGTGGGTGCTaGAAACTGAACGTGTGTCCTTTGCAAGGGCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: GVTGDSELPCGC*KLNVCPLQGQG Trigger: TCCCTGCCCTTGCAAAGGACACACGTTCAGTTTCCAGCACCCACAGGGCAGCTCAGAATCACCTGTAACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| 3UTR-3UTR CAA 90 bp | GGCTGTGAGCTCACTGATTCTTCTGCAGTAACAAACAGATGCCCAAGACCCAGAGAAAGCAAAAGCTGGTaGGGCGGGAGGCGGCACACT | + |
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Preference number: 3 (lower is better) Translates to: GCELTDSSAVTNRCPRPRESKSW*GGRRHT Trigger: AGTGTGCCGCCTCCCGCCCAACCAGCTTTTGCTTTC...TCTGGGTCTTGGGCATCTGTTTGTTACTGCAGAAGAATCAGTGAGCTCACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| 3UTR TCA 72 bp | AAGTTCGAGGCCAGCCTTGGCTACCTAGCAAGCCTGTaGCACAAGGAGGAAATAACAACGATGGGGTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: KFEASLGYLASL*HKEEITTMGLR Trigger: CCTCAACCCCATCGTTGTTATTTCCTCCTTGTGTCACAGGCTTGCTAGGTAGCCAAGGCTGGCCTCGAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR GCA 90 bp | AGGAAAGCAAAAGCTGGTTGGGCGGGAGGCGGCACACTCATTTCTTCTCAGTCCACGGGCGGCGCCCACTaGACAGTGGCCTCCAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: RKAKAGWAGGGTLISSQSTGGAH*TVASRV Trigger: AACCCTGGAGGCCACTGTGCAGTGGGCGCCGCCCGT...GGACTGAGAAGAAATGAGTGTGCCGCCTCCCGCCCAACCAGCTTTTGCTTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CCA 90 bp | GCTCTGGGGATGCTGCAGCAGGGAGGATCACAAGTTCGAGGCCAGCCTTGGCTATGGGAGGCACCCAGCTaGTGCTGTTGCCAGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: ALGMLQQGGSQVRGQPWLWEAPS*CCCQER Trigger: TCTCTCCTGGCAACAGCACCAGCTGGGTGCCTCCCA...TAGCCAAGGCTGGCCTCGAACTTGTGATCCTCCCTGCTGCAGCATCCCCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CCA 90 bp | TCTGGGGATGCTGCAGCAGGGAGGATCACAAGTTCGAGGCCAGCCTTGGCTACCTACAACAGGTGTCCCTaGGGGGTCATCTGGAAGTCG | + |
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Preference number: 4 (lower is better) Translates to: SGDAAAGRITSSRPALATYNRCP*GVIWKS Trigger: CGACTTCCAGATGACCCCCCAGGGACACCTGTTGTA...GGTAGCCAAGGCTGGCCTCGAACTTGTGATCCTCCCTGCTGCAGCATCCCCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CCA 90 bp | GCCCTGTGGGTGCTGGAAACTGAACGTGTGTCCTTTGCAAGGGCAGGGAACCAAAAGGTTGGGACCAGGTaGGCCCTGTCCTGCAACGGT | + |
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Preference number: 4 (lower is better) Translates to: ALWVLETERVSFARAGNQKVGTR*ALSCNG Trigger: ACCGTTGCAGGACAGGGCCCACCTGGTCCCAACCTT...TTGGTTCCCTGCCCTTGCAAAGGACACACGTTCAGTTTCCAGCACCCACAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CCA 90 bp | GCCCTGTGGGTGCTGGAAACTGAACGTGTGTCCTTTGCAAGGGCAGGGAACCAAGCCTGGCCTCTGAGCTaGTGTCTTGGTACTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: ALWVLETERVSFARAGNQAWPLS*CLGTSP Trigger: GGGAGAAGTACCAAGACACCAGCTCAGAGGCCAGGC...TTGGTTCCCTGCCCTTGCAAAGGACACACGTTCAGTTTCCAGCACCCACAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CCA 90 bp | GCCCTGTGGGTGCTGGAAACTGAACGTGTGTCCTTTGCAAGGGCAGGGAACCAACTCTCCCAGATCCACTaGGGAAGCAACTTGTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: ALWVLETERVSFARAGNQLSQIH*GSNLCR Trigger: GCGGCACAAGTTGCTTCCCCAGTGGATCTGGGAGAG...TTGGTTCCCTGCCCTTGCAAAGGACACACGTTCAGTTTCCAGCACCCACAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CCA 90 bp | GCCCTGTGGGTGCTGGAAACTGAACGTGTGTCCTTTGCAAGGGCAGGGAACCAACGTTCCTGCAGACAGTaGAGAGGCCTCTGCTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: ALWVLETERVSFARAGNQRSCRQ*RGLCSV Trigger: TACAGAGCAGAGGCCTCTCCACTGTCTGCAGGAACG...TTGGTTCCCTGCCCTTGCAAAGGACACACGTTCAGTTTCCAGCACCCACAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CCA 90 bp | CCCAGAGGCAAGGAAAGCAAAAGCTGGTTGGGCGGGAGGCGGCACACTCATTTCGCCCAGAATTGCTGTTaGCAGGATCAGGAACCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PRGKESKSWLGGRRHTHFAQNCC*QDQEPS Trigger: AGAGGGTTCCTGATCCTGCCAACAGCAATTCTGGGC...GAAATGAGTGTGCCGCCTCCCGCCCAACCAGCTTTTGCTTTCCTTGCCTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR GCA 90 bp | GGCCAGCCTTGGCTACCTAGCAAGCCTGTGACACAAGGAGGAAATAACAACGATCAGATGAGAACTTTCTaGGGTGGCCACACGGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: GQPWLPSKPVTQGGNNNDQMRTF*GGHTGG Trigger: GCCGCCCGTGTGGCCACCGCAGAAAGTTCTCATCTG...ATCGTTGTTATTTCCTCCTTGTGTCACAGGCTTGCTAGGTAGCCAAGGCTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR GCA 90 bp | GCCCTGTGGGTGCTGGAAACTGAACGTGTGTCCTTTGCAAGGGCAGGGAACCAACAGTGGAGAGGCCTCTaGTCTGTATGCAGAAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: ALWVLETERVSFARAGNQQWRGL*SVCRRC Trigger: ACACCTTCTGCATACAGAGCAGAGGCCTCTCCACTG...TTGGTTCCCTGCCCTTGCAAAGGACACACGTTCAGTTTCCAGCACCCACAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CCA 90 bp | GGCATTGGATTCCTTGGACCTGGAGTTACAGGTGATTCTGAGCTGCCCTGTGGGACAGGGGGCAGATTCTaGAGCCAAGCACACCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: GIGFLGPGVTGDSELPCGTGGRF*SQAHQR Trigger: TCTCTGGTGTGCTTGGCTCCAGAATCTGCCCCCTGT...CCCACAGGGCAGCTCAGAATCACCTGTAACTCCAGGTCCAAGGAATCCAATGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR TCA 90 bp | ATTGGATTCCTTGGACCTGGAGTTACAGGTGATTCTGAGCTGCCCTGTGGGTGCAGGCTGTCACCATCTTaGGCCCAGTCCACCACATAC | + |
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Preference number: 4 (lower is better) Translates to: IGFLGPGVTGDSELPCGCRLSPS*AQSTTY Trigger: GTATGTGGTGGACTGGGCTCAAGATGGTGACAGCCT...GCACCCACAGGGCAGCTCAGAATCACCTGTAACTCCAGGTCCAAGGAATCCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR TCA 90 bp | ATTGGATTCCTTGGACCTGGAGTTACAGGTGATTCTGAGCTGCCCTGTGGGTGCCCGTCACCCACAGCTTaGAGGAACCCAAGTGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: IGFLGPGVTGDSELPCGCPSPTA*RNPSEG Trigger: ACCTTCACTTGGGTTCCTTCAAGCTGTGGGTGACGG...GCACCCACAGGGCAGCTCAGAATCACCTGTAACTCCAGGTCCAAGGAATCCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR TCA 90 bp | CCCAGAGGCAAGGAAAGCAAAAGCTGGTTGGGCGGGAGGCGGCACACTCATTTCGCAGAGCTTTCCACCTaGTCCTATTATCTGGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: PRGKESKSWLGGRRHTHFAELST*SYYLVG Trigger: ACCTACCAGATAATAGGATCAGGTGGAAAGCTCTGC...GAAATGAGTGTGCCGCCTCCCGCCCAACCAGCTTTTGCTTTCCTTGCCTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR GCA 90 bp | CAAGGAGGAAATAACAACGATGGGGTTGAGGCTGTGAGCTCACTGATTCTTCTGCCCAGCTGGTGCTGTTaGCAGGAGAGACCACAGCCC | + |
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Preference number: 4 (lower is better) Translates to: QGGNNNDGVEAVSSLILLPSWCC*QERPQP Trigger: GGGCTGTGGTCTCTCCTGGCAACAGCACCAGCTGGG...CAGAAGAATCAGTGAGCTCACAGCCTCAACCCCATCGTTGTTATTTCCTCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CCA 90 bp | CAAGGAGGAAATAACAACGATGGGGTTGAGGCTGTGAGCTCACTGATTCTTCTGCCAGAGACAGGTTGGTaGGAGGCACCCAGCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: QGGNNNDGVEAVSSLILLPETGW*EAPSWC Trigger: GCACCAGCTGGGTGCCTCCCACCAACCTGTCTCTGG...CAGAAGAATCAGTGAGCTCACAGCCTCAACCCCATCGTTGTTATTTCCTCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CCA 90 bp | TTCCTTGGACCTGGAGTTACAGGTGATTCTGAGCTGCCCTGTGGGTGCTGGAAAGAAGGTTGGGCAGAGTaGCAGTCTGGGTTTGACTGC | + |
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Preference number: 4 (lower is better) Translates to: FLGPGVTGDSELPCGCWKEGWAE*QSGFDC Trigger: GCAGTCAAACCCAGACTGCCACTCTGCCCAACCTTC...TTTCCAGCACCCACAGGGCAGCTCAGAATCACCTGTAACTCCAGGTCCAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CCA 90 bp | TTCCTTGGACCTGGAGTTACAGGTGATTCTGAGCTGCCCTGTGGGTGCTGGAAAAACCCAAGTGAAGGTTaGGCAGAGTGGCAGTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: FLGPGVTGDSELPCGCWKNPSEG*AEWQSG Trigger: CCCAGACTGCCACTCTGCCCAACCTTCACTTGGGTT...TTTCCAGCACCCACAGGGCAGCTCAGAATCACCTGTAACTCCAGGTCCAAGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CCA 90 bp | CCTTGGCTACCTAGCAAGCCTGTGACACAAGGAGGAAATAACAACGATGGGGTTCCTGTCCTGCAACGGTaGACACCGTCACCCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: PWLPSKPVTQGGNNNDGVPVLQR*TPSPTA Trigger: AGCTGTGGGTGACGGTGTCCACCGTTGCAGGACAGG...AACCCCATCGTTGTTATTTCCTCCTTGTGTCACAGGCTTGCTAGGTAGCCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| 3UTR CAA 72 bp | AGGGCTCACAGAAGCCAGAAGAGGGCATTGGATTCCTaGGACCTGGAGTTACAGGTGATTCTGAGCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: RAHRSQKRALDS*DLELQVILSCP Trigger: AGGGCAGCTCAGAATCACCTGTAACTCCAGGTCCAAGGAATCCAATGCCCTCTTCTGGCTTCTGTGAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR TCA 90 bp | AGGCAAGGAAAGCAAAAGCTGGTTGGGCGGGAGGCGGCACACTCATTTCTTCTCGTACTAACTCCTCTCTaGATCCCCAAACTGAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: RQGKQKLVGREAAHSFLLVLTPL*IPKLRV Trigger: CACCCTCAGTTTGGGGATTCAGAGAGGAGTTAGTAC...GAGAAGAAATGAGTGTGCCGCCTCCCGCCCAACCAGCTTTTGCTTTCCTTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR GCA 90 bp | GGCTGTGAGCTCACTGATTCTTCTGCAGTAACAAACAGATGCCCAAGACCCAGACAGGGACAGGGGACTTaGAGCACGGGACCTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GCELTDSSAVTNRCPRPRQGQGT*STGPLL Trigger: AAGAAGAGGTCCCGTGCTGCAAGTCCCCTGTCCCTG...TCTGGGTCTTGGGCATCTGTTTGTTACTGCAGAAGAATCAGTGAGCTCACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CCA 90 bp | GGCCAGCCTTGGCTACCTAGCAAGCCTGTGACACAAGGAGGAAATAACAACGATGTGATACAGCACAGGTaGAGTCTCCAGGTCGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: GQPWLPSKPVTQGGNNNDVIQHR*SLQVAQ Trigger: TTGGGCGACCTGGAGACTCCACCTGTGCTGTATCAC...ATCGTTGTTATTTCCTCCTTGTGTCACAGGCTTGCTAGGTAGCCAAGGCTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CCA 90 bp | TTGGATTCCTTGGACCTGGAGTTACAGGTGATTCTGAGCTGCCCTGTGGGTGCTTCACCCAACTCTGTTTaGAAGGCACCTTCACCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LDSLDLELQVILSCPVGASPNSV*KAPSPP Trigger: GGGAGGTGAAGGTGCCTTCCAAACAGAGTTGGGTGA...AGCACCCACAGGGCAGCTCAGAATCACCTGTAACTCCAGGTCCAAGGAATCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CCA 90 bp | AGGCAAGGAAAGCAAAAGCTGGTTGGGCGGGAGGCGGCACACTCATTTCTTCTCGTGTCTGGCTTCATTTaGGTCTCCAGGTTCACAGAG | + |
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Preference number: 4 (lower is better) Translates to: RQGKQKLVGREAAHSFLLVSGFI*VSRFTE Trigger: CTCTGTGAACCTGGAGACCCAAATGAAGCCAGACAC...GAGAAGAAATGAGTGTGCCGCCTCCCGCCCAACCAGCTTTTGCTTTCCTTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CCA 90 bp | CAAGGAGGAAATAACAACGATGGGGTTGAGGCTGTGAGCTCACTGATTCTTCTGTATCCGTTCTCCACCTaGCAGCGGCCAGACACCTGG | + |
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Preference number: 4 (lower is better) Translates to: QGGNNNDGVEAVSSLILLYPFST*QRPDTW Trigger: CCAGGTGTCTGGCCGCTGCCAGGTGGAGAACGGATA...CAGAAGAATCAGTGAGCTCACAGCCTCAACCCCATCGTTGTTATTTCCTCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| 3UTR CAA 72 bp | TGTGTGTGCAGGGCTCACAGAAGCCAGAAGAGGGCATaGGATTCCTTGGACCTGGAGTTACAGGTGATTCTG | + |
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Preference number: 4 (lower is better) Translates to: CVCRAHRSQKRA*DSLDLELQVIL Trigger: CAGAATCACCTGTAACTCCAGGTCCAAGGAATCCAATGCCCTCTTCTGGCTTCTGTGAGCCCTGCACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR TCA 90 bp | GGCATTGGATTCCTTGGACCTGGAGTTACAGGTGATTCTGAGCTGCCCTGTGGGTCCTTGTACCGGAACTaGCAGATGAGAACTTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: GIGFLGPGVTGDSELPCGSLYRN*QMRTFC Trigger: GCAGAAAGTTCTCATCTGTCAGTTCCGGTACAAGGA...CCCACAGGGCAGCTCAGAATCACCTGTAACTCCAGGTCCAAGGAATCCAATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CCA 90 bp | GCCCTGTGGGTGCTGGAAACTGAACGTGTGTCCTTTGCAAGGGCAGGGAACCAACCTCCCAGACTCTATTaGGATGGTATTTCTGACTCT | + |
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Preference number: 4 (lower is better) Translates to: ALWVLETERVSFARAGNQPPRLY*DGISDS Trigger: AGAGTCAGAAATACCATCCCAATAGAGTCTGGGAGG...TTGGTTCCCTGCCCTTGCAAAGGACACACGTTCAGTTTCCAGCACCCACAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CCA 90 bp | GGCCAGCCTTGGCTACCTAGCAAGCCTGTGACACAAGGAGGAAATAACAACGATTCTGAGCTGGTGTCTTaGTACTTCTCCCCAGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: GQPWLPSKPVTQGGNNNDSELVS*YFSPGY Trigger: GTAGCCTGGGGAGAAGTACCAAGACACCAGCTCAGA...ATCGTTGTTATTTCCTCCTTGTGTCACAGGCTTGCTAGGTAGCCAAGGCTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR GCA 90 bp | CAGCCTTGGCTACCTAGCAAGCCTGTGACACAAGGAGGAAATAACAACGATGGGAGTGGCCTCCAGGGTTaGTTCCTCAGAAATATCCAC | + |
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Preference number: 4 (lower is better) Translates to: QPWLPSKPVTQGGNNNDGSGLQG*FLRNIH Trigger: GTGGATATTTCTGAGGAAGCAACCCTGGAGGCCACT...CCCATCGTTGTTATTTCCTCCTTGTGTCACAGGCTTGCTAGGTAGCCAAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR GCA 90 bp | TGCAAGAAAACACAGGCTCTTAACCACTTCAGGCCCTTGAATGTGTCTTTCGAGGACTGCTCACGTTCCTaGAGACAGTGGAGAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: CKKTQALNHFRPLNVSFEDCSRS*RQWRGL Trigger: GAGGCCTCTCCACTGTCTGCAGGAACGTGAGCAGTC...CTCGAAAGACACATTCAAGGGCCTGAAGTGGTTAAGAGCCTGTGTTTTCTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR GCA 90 bp | TTGGATTCCTTGGACCTGGAGTTACAGGTGATTCTGAGCTGCCCTGTGGGTGCTAAGGTTGCCCAGAATTaGTGTTGGCAGGATCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LDSLDLELQVILSCPVGAKVAQN*CWQDQE Trigger: TTCCTGATCCTGCCAACAGCAATTCTGGGCAACCTT...AGCACCCACAGGGCAGCTCAGAATCACCTGTAACTCCAGGTCCAAGGAATCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS-3UTR CCA 90 bp | CCTTGGCTACCTAGCAAGCCTGTGACACAAGGAGGAAATAACAACGATGGGGTTACTGTTCCCGGGGAATaGTCACCCAACTCTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PWLPSKPVTQGGNNNDGVTVPGE*SPNSVW Trigger: CCAAACAGAGTTGGGTGACCATTCCCCGGGAACAGT...AACCCCATCGTTGTTATTTCCTCCTTGTGTCACAGGCTTGCTAGGTAGCCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS-3UTR TCA 90 bp | AGGGCATTGGATTCCTTGGACCTGGAGTTACAGGTGATTCTGAGCTGCCCTGTGCTATTATCTGGTAGGTaGAGTGAAAGGTTGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: RALDSLDLELQVILSCPVLLSGR*SERLGP Trigger: TGGTCCCAACCTTTCACTTCACCTACCAGATAATAG...CACAGGGCAGCTCAGAATCACCTGTAACTCCAGGTCCAAGGAATCCAATGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS-3UTR TCA 90 bp | GGCCAGCCTTGGCTACCTAGCAAGCCTGTGACACAAGGAGGAAATAACAACGATTCAGAAATATCCACTTaGGAGAAGATCTGGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQPWLPSKPVTQGGNNNDSEIST*EKIWGV Trigger: CACACCCCAGATCTTCTCTCAAGTGGATATTTCTGA...ATCGTTGTTATTTCCTCCTTGTGTCACAGGCTTGCTAGGTAGCCAAGGCTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS-3UTR CCA 90 bp | TGCAAGAAAACACAGGCTCTTAACCACTTCAGGCCCTTGAATGTGTCTTTCGAGCTGCACACAAGGTCTTaGGTCCTTCCAGACAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CKKTQALNHFRPLNVSFELHTRS*VLPDKQ Trigger: CTGCTTGTCTGGAAGGACCCAAGACCTTGTGTGCAG...CTCGAAAGACACATTCAAGGGCCTGAAGTGGTTAAGAGCCTGTGTTTTCTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS-3UTR GCA 90 bp | ACCATGTGTGTGCAGGGCTCACAGAAGCCAGAAGAGGGCATTGGATTCCTTGGATCCTCCAGAATATACTaGAGTCACTGTAATTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: TMCVQGSQKPEEGIGFLGSSRIY*SHCNSI Trigger: TATCGAATTACAGTGACTGCAGTATATTCTGGAGGA...TCCAAGGAATCCAATGCCCTCTTCTGGCTTCTGTGAGCCCTGCACACACATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS GCA 90 bp | GGATTCCCAGGGGACCGACGCTGTAGCACTGCAGTGGACCTGGACTaGCGTGGGGCCGCGTCCCGAGCAGCAGCGACATCAGCGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GFPGDRRCSTAVDLD*RGAASRAAATSATA Trigger: TGCTGTCGCTGATGTCGCTGCTGCTCGGGACGCGGCCCCACGGCAGTCCAGGTCCACTGCAGTGCTACAGCGTCGGTCCCCTGGGAATCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS CCA 90 bp | GTTCAGGATTCCCAGGGGACCGACGCTGTAGCACTGCAGTGGACCTaGACTGCCGTGGGGCCGCGTCCCGAGCAGCAGCGACATCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: VQDSQGTDAVALQWT*TAVGPRPEQQRHQR Trigger: TCGCTGATGTCGCTGCTGCTCGGGACGCGGCCCCACGGCAGTCCAGGTCCACTGCAGTGCTACAGCGTCGGTCCCCTGGGAATCCTGAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS CCA 90 bp | GGAGCAGTTCAGGATTCCCAGGGGACCGACGCTGTAGCACTGCAGTaGACCTGGACTGCCGTGGGGCCGCGTCCCGAGCAGCAGCGACAT | + |
|
Preference number: 5 (lower is better) Translates to: GAVQDSQGTDAVALQ*TWTAVGPRPEQQRH Trigger: ATGTCGCTGCTGCTCGGGACGCGGCCCCACGGCAGTCCAGGTCCACTGCAGTGCTACAGCGTCGGTCCCCTGGGAATCCTGAACTGCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS CCA 90 bp | CCCAGATCCACTGGGGAAGCAACTTGTGCCGCCAGTGTAAGCACCTaGCCTGTAGGCACCTGGTACTGGCCAGGCTCAGGCCACAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PRSTGEATCAASVST*PVGTWYWPGSGHSP Trigger: TGGGCTGTGGCCTGAGCCTGGCCAGTACCAGGTGCCTACAGGCCAGGTGCTTACACTGGCGGCACAAGTTGCTTCCCCAGTGGATCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS GCA 90 bp | GAGCCAAGCACACCAGAGACAGGTTGGTGGGAGGCACCCAGCTGGTaGTGTTGCCAGGAGAGACCACAGCCCACTCCATCCATGCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: EPSTPETGWWEAPSW*CCQERPQPTPSMQG Trigger: TCCCTGCATGGATGGAGTGGGCTGTGGTCTCTCCTGGCAACAGCACCAGCTGGGTGCCTCCCACCAACCTGTCTCTGGTGTGCTTGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS CCA 90 bp | CTGGCATTCCTTGTACCGGAACTGACAGATGAGAACTTTCTGCGGTaGCCACACGGGCGGCGCCCACTGCACAGTGGCCTCCAGGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LAFLVPELTDENFLR*PHGRRPLHSGLQGC Trigger: GCAACCCTGGAGGCCACTGTGCAGTGGGCGCCGCCCGTGTGGCCACCGCAGAAAGTTCTCATCTGTCAGTTCCGGTACAAGGAATGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS CCA 90 bp | CTGGAGCCAAGCACACCAGAGACAGGTTGGTGGGAGGCACCCAGCTaGTGCTGTTGCCAGGAGAGACCACAGCCCACTCCATCCATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LEPSTPETGWWEAPS*CCCQERPQPTPSMQ Trigger: CTGCATGGATGGAGTGGGCTGTGGTCTCTCCTGGCAACAGCACCAGCTGGGTGCCTCCCACCAACCTGTCTCTGGTGTGCTTGGCTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS CCA 90 bp | CGTCACAGGGGGCAGATTCTGGAGCCAAGCACACCAGAGACAGGTTaGTGGGAGGCACCCAGCTGGTGCTGTTGCCAGGAGAGACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: RHRGQILEPSTPETG*WEAPSWCCCQERPQ Trigger: CTGTGGTCTCTCCTGGCAACAGCACCAGCTGGGTGCCTCCCACCAACCTGTCTCTGGTGTGCTTGGCTCCAGAATCTGCCCCCTGTGACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS GCA 90 bp | GCAGGATCAGGAACCCTCTCCCAGATCCACTGGGGAAGCAACTTGTaGCGCCAGTGTAAGCACCTGGCCTGTAGGCACCTGGTACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGSGTLSQIHWGSNL*RQCKHLACRHLVLA Trigger: GGCCAGTACCAGGTGCCTACAGGCCAGGTGCTTACACTGGCGGCACAAGTTGCTTCCCCAGTGGATCTGGGAGAGGGTTCCTGATCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS CCA 90 bp | GAGCTGGTGTCTTGGTACTTCTCCCCAGGCTACAACAGGTGTCCCTaGGGGGTCATCTGGAAGTCGCCAAACTGCTGGCCCAGCAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ELVSWYFSPGYNRCP*GVIWKSPNCWPSKG Trigger: CCCCTTGCTGGGCCAGCAGTTTGGCGACTTCCAGATGACCCCCCAGGGACACCTGTTGTAGCCTGGGGAGAAGTACCAAGACACCAGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS TCA 90 bp | CAGGTGGGCCCTGTCCTGCAACGGTGGACACCGTCACCCACAGCTTaGAGGAACCCAAGTGAAGGTTGGGCAGAGTGGCAGTCTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QVGPVLQRWTPSPTA*RNPSEGWAEWQSGF Trigger: AAACCCAGACTGCCACTCTGCCCAACCTTCACTTGGGTTCCTTCAAGCTGTGGGTGACGGTGTCCACCGTTGCAGGACAGGGCCCACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS TCA 90 bp | CCAGGATGGGTCCGTCCTTGGGCGGTTGGGGCAGGCTCACCTCCTTaGTGTAAGGTTGCCCAGAATTGCTGTTGGCAGGATCAGGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: PGWVRPWAVGAGSPP*CKVAQNCCWQDQEP Trigger: GGGTTCCTGATCCTGCCAACAGCAATTCTGGGCAACCTTACATCAAGGAGGTGAGCCTGCCCCAACCGCCCAAGGACGGACCCATCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS-3UTR CAA 90 bp | GCCCTGTGGGTGCTGGAAACTGAACGTGTGTCCTTTGCAAGGGCAGGGAACCAAACCCAGCTGGTGCTGTaGCCAGGAGAGACCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALWVLETERVSFARAGNQTQLVL*PGETTA Trigger: GGCTGTGGTCTCTCCTGGCAACAGCACCAGCTGGGT...TTGGTTCCCTGCCCTTGCAAAGGACACACGTTCAGTTTCCAGCACCCACAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS CCA 90 bp | CTCCAACGGTTTCCTGGTCCCTTGTTTCCAGGTCACCTTTATCCCTaGGCTCCCATCAGCACTGCTCACTCCCACGTCACAGGGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQRFPGPLFPGHLYP*APISTAHSHVTGGR Trigger: TCTGCCCCCTGTGACGTGGGAGTGAGCAGTGCTGATGGGAGCCCAGGGATAAAGGTGACCTGGAAACAAGGGACCAGGAAACCGTTGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS-3UTR CAA 90 bp | GGCAAGGAAAGCAAAAGCTGGTTGGGCGGGAGGCGGCACACTCATTTCTTCTCACACACCAGAGACAGGTaGGTGGGAGGCACCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GKESKSWLGGRRHTHFFSHTRDR*VGGTQL Trigger: CAGCTGGGTGCCTCCCACCAACCTGTCTCTGGTGTG...TGAGAAGAAATGAGTGTGCCGCCTCCCGCCCAACCAGCTTTTGCTTTCCTTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS GCA 90 bp | GCACACAAGGTCTTGGGTCCTTCCAGACAAGCAGGGCTGCCCGTTTaGCAGAAGTTTCACAGACGGTCCCCGATACCCACACATCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AHKVLGPSRQAGLPV*QKFHRRSPIPTHLQ Trigger: CTGAAGATGTGTGGGTATCGGGGACCGTCTGTGAAACTTCTGGCAAACGGGCAGCCCTGCTTGTCTGGAAGGACCCAAGACCTTGTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS GCA 90 bp | GAAGGTTGGGCAGAGTGGCAGTCTGGGTTTGACTGCTCACGTTCCTaGAGACAGTGGAGAGGCCTCTGCTCTGTATGCAGAAGGTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: EGWAEWQSGFDCSRS*RQWRGLCSVCRRCS Trigger: ACTACACCTTCTGCATACAGAGCAGAGGCCTCTCCACTGTCTGCAGGAACGTGAGCAGTCAAACCCAGACTGCCACTCTGCCCAACCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS CCA 90 bp | TCCAGCCCCAAACCAGACTGTGTAAGTCACCTGCACACAAGGTCTTaGGTCCTTCCAGACAAGCAGGGCTGCCCGTTTGCCAGAAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSPKPDCVSHLHTRS*VLPDKQGCPFARSF Trigger: GAAACTTCTGGCAAACGGGCAGCCCTGCTTGTCTGGAAGGACCCAAGACCTTGTGTGCAGGTGACTTACACAGTCTGGTTTGGGGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CCA 90 bp | TGTCACCATCTTGAGCCCAGTCCACCACATACTCCAACGGTTTCCTaGTCCCTTGTTTCCAGGTCACCTTTATCCCTGGGCTCCCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: CHHLEPSPPHTPTVS*SLVSRSPLSLGSHQ Trigger: CTGATGGGAGCCCAGGGATAAAGGTGACCTGGAAACAAGGGACCAGGAAACCGTTGGAGTATGTGGTGGACTGGGCTCAAGATGGTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CAA 90 bp | TTCCTTGGACCTGGAGTTACAGGTGATTCTGAGCTGCCCTGTGGGTGCTGGAAACAGGCTGTCACCATCTaGAGCCCAGTCCACCACATA | + |
|
Preference number: 5 (lower is better) Translates to: FLGPGVTGDSELPCGCWKQAVTI*SPVHHI Trigger: TATGTGGTGGACTGGGCTCAAGATGGTGACAGCCTG...TTTCCAGCACCCACAGGGCAGCTCAGAATCACCTGTAACTCCAGGTCCAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS-3UTR CAA 90 bp | ATTGGATTCCTTGGACCTGGAGTTACAGGTGATTCTGAGCTGCCCTGTGGGTGCAGTGGCAGTCTGGGTTaGACTGCTCACGTTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IGFLGPGVTGDSELPCGCSGSLG*TAHVPA Trigger: TGCAGGAACGTGAGCAGTCAAACCCAGACTGCCACT...GCACCCACAGGGCAGCTCAGAATCACCTGTAACTCCAGGTCCAAGGAATCCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CAA 90 bp | CTCACTGATTCTTCTGCAGTAACAAACAGATGCCCAAGACCCAGAGGCAAGGAAGGGAGACGGGTCCAGTaGAGCTTGTCCAGGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LTDSSAVTNRCPRPRGKEGRRVQ*SLSRLS Trigger: TGACAGCCTGGACAAGCTCAACTGGACCCGTCTCCC...TTCCTTGCCTCTGGGTCTTGGGCATCTGTTTGTTACTGCAGAAGAATCAGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS TCA 90 bp | GAAGTCGCCAAACTGCTGGCCCAGCAAGGGGTACTAACTCCTCTCTaGATCCCCAAACTGAGGGTGCAGCAGCTAATCCTCCAGAATATA | + |
|
Preference number: 5 (lower is better) Translates to: EVAKLLAQQGVLTPL*IPKLRVQQLILQNI Trigger: TATATTCTGGAGGATTAGCTGCTGCACCCTCAGTTTGGGGATTCAGAGAGGAGTTAGTACCCCTTGCTGGGCCAGCAGTTTGGCGACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS TCA 90 bp | GAAGCAAACCCCACAGGGACAGAAACCAGGGCAGAGCTTTCCACCTaGTCCTATTATCTGGTAGGTGAAGTGAAAGGTTGGGACCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EANPTGTETRAELST*SYYLVGEVKGWDQV Trigger: CACCTGGTCCCAACCTTTCACTTCACCTACCAGATAATAGGATCAGGTGGAAAGCTCTGCCCTGGTTTCTGTCCCTGTGGGGTTTGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS-3UTR CAA 90 bp | CCTTGGCTACCTAGCAAGCCTGTGACACAAGGAGGAAATAACAACGATGGGGTTTGCCCAGAATTGCTGTaGGCAGGATCAGGAACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PWLPSKPVTQGGNNNDGVCPELL*AGSGTL Trigger: GAGGGTTCCTGATCCTGCCAACAGCAATTCTGGGCA...AACCCCATCGTTGTTATTTCCTCCTTGTGTCACAGGCTTGCTAGGTAGCCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS-3UTR CAA 90 bp | GGCCAGCCTTGGCTACCTAGCAAGCCTGTGACACAAGGAGGAAATAACAACGATTGTGTCTGGCTTCATTaGGGTCTCCAGGTTCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GQPWLPSKPVTQGGNNNDCVWLH*GLQVHR Trigger: TCTGTGAACCTGGAGACCCAAATGAAGCCAGACACA...ATCGTTGTTATTTCCTCCTTGTGTCACAGGCTTGCTAGGTAGCCAAGGCTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CCA 90 bp | TGCTTCCTCAGAAATATCCACTTGAGAGAAGATCTGGGGTGTGTCTaGCTTCATTTGGGTCTCCAGGTTCACAGAGACAGAGGACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: CFLRNIHLREDLGCV*LHLGLQVHRDRGPQ Trigger: CTGTGGTCCTCTGTCTCTGTGAACCTGGAGACCCAAATGAAGCCAGACACACCCCAGATCTTCTCTCAAGTGGATATTTCTGAGGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS CCA 72 bp | TCCCAGGGGACCGACGCTGTAGCACTGCAGTGGACCTaGACTGCCGTGGGGCCGCGTCCCGAGCAGCAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: SQGTDAVALQWT*TAVGPRPEQQR Trigger: TCGCTGCTGCTCGGGACGCGGCCCCACGGCAGTCCAGGTCCACTGCAGTGCTACAGCGTCGGTCCCCTGGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS GCA 72 bp | GGGGACCGACGCTGTAGCACTGCAGTGGACCTGGACTaGCGTGGGGCCGCGTCCCGAGCAGCAGCGACATCA | + |
|
Preference number: 6 (lower is better) Translates to: GDRRCSTAVDLD*RGAASRAAATS Trigger: TGATGTCGCTGCTGCTCGGGACGCGGCCCCACGGCAGTCCAGGTCCACTGCAGTGCTACAGCGTCGGTCCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS CCA 72 bp | CGTCTGGAAGGACAGGGGCGAACTCCACTCGCCCCATaGATATCCGTTCTCCACCTGGCAGCGGCCAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: RLEGQGRTPLAP*ISVLHLAAARH Trigger: GTGTCTGGCCGCTGCCAGGTGGAGAACGGATATCCATGGGGCGAGTGGAGTTCGCCCCTGTCCTTCCAGACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS CCA 72 bp | CAACAGGCTGTAGCTCCACTTCCTCCACCTCCAGGATaGGTCCGTCCTTGGGCGGTTGGGGCAGGCTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: QQAVAPLPPPPG*VRPWAVGAGSP Trigger: AGGTGAGCCTGCCCCAACCGCCCAAGGACGGACCCATCCTGGAGGTGGAGGAAGTGGAGCTACAGCCTGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS CAA 90 bp | AAGCACACCAGAGACAGGTTGGTGGGAGGCACCCAGCTGGTGCTGTaGCCAGGAGAGACCACAGCCCACTCCATCCATGCAGGGACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: KHTRDRLVGGTQLVL*PGETTAHSIHAGTG Trigger: CCCTGTCCCTGCATGGATGGAGTGGGCTGTGGTCTCTCCTGGCAACAGCACCAGCTGGGTGCCTCCCACCAACCTGTCTCTGGTGTGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS GCA 72 bp | GCTGTTGCCAGGAGAGACCACAGCCCACTCCATCCATaGAGGGACAGGGGACTTGCAGCACGGGACCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AVARRDHSPLHP*RDRGLAARDLF Trigger: GAAGAGGTCCCGTGCTGCAAGTCCCCTGTCCCTGCATGGATGGAGTGGGCTGTGGTCTCTCCTGGCAACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS GCA 72 bp | GAGACAGGTTGGTGGGAGGCACCCAGCTGGTGCTGTTaGCAGGAGAGACCACAGCCCACTCCATCCATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ETGWWEAPSWCC*QERPQPTPSMQ Trigger: CTGCATGGATGGAGTGGGCTGTGGTCTCTCCTGGCAACAGCACCAGCTGGGTGCCTCCCACCAACCTGTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS GCA 72 bp | ACACCAGAGACAGGTTGGTGGGAGGCACCCAGCTGGTaGTGTTGCCAGGAGAGACCACAGCCCACTCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: TPETGWWEAPSW*CCQERPQPTPS Trigger: GGATGGAGTGGGCTGTGGTCTCTCCTGGCAACAGCACCAGCTGGGTGCCTCCCACCAACCTGTCTCTGGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS CCA 72 bp | TCTGCGGTGGCCACACGGGCGGCGCCCACTGCACAGTaGCCTCCAGGGTTGCTTCCTCAGAAATATCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: SAVATRAAPTAQ*PPGLLPQKYPL Trigger: AAGTGGATATTTCTGAGGAAGCAACCCTGGAGGCCACTGTGCAGTGGGCGCCGCCCGTGTGGCCACCGCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS CCA 72 bp | CTTGTACCGGAACTGACAGATGAGAACTTTCTGCGGTaGCCACACGGGCGGCGCCCACTGCACAGTGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LVPELTDENFLR*PHGRRPLHSGL Trigger: GAGGCCACTGTGCAGTGGGCGCCGCCCGTGTGGCCACCGCAGAAAGTTCTCATCTGTCAGTTCCGGTACAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS CCA 72 bp | TGTGCCGCCAGTGTAAGCACCTGGCCTGTAGGCACCTaGTACTGGCCAGGCTCAGGCCACAGCCCATCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: CAASVSTWPVGT*YWPGSGHSPSE Trigger: TTCTGATGGGCTGTGGCCTGAGCCTGGCCAGTACCAGGTGCCTACAGGCCAGGTGCTTACACTGGCGGCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS CCA 72 bp | ACTGGGGAAGCAACTTGTGCCGCCAGTGTAAGCACCTaGCCTGTAGGCACCTGGTACTGGCCAGGCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: TGEATCAASVST*PVGTWYWPGSG Trigger: GCCTGAGCCTGGCCAGTACCAGGTGCCTACAGGCCAGGTGCTTACACTGGCGGCACAAGTTGCTTCCCCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS CAA 72 bp | GGGGCAGATTCTGGAGCCAAGCACACCAGAGACAGGTaGGTGGGAGGCACCCAGCTGGTGCTGTTGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GADSGAKHTRDR*VGGTQLVLLPG Trigger: TCCTGGCAACAGCACCAGCTGGGTGCCTCCCACCAACCTGTCTCTGGTGTGCTTGGCTCCAGAATCTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS GCA 72 bp | AGAACTTTCTGCGGTGGCCACACGGGCGGCGCCCACTaGACAGTGGCCTCCAGGGTTGCTTCCTCAGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: RTFCGGHTGGAH*TVASRVASSEI Trigger: TATTTCTGAGGAAGCAACCCTGGAGGCCACTGTGCAGTGGGCGCCGCCCGTGTGGCCACCGCAGAAAGTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
||
| CDS GCA 72 bp | GGAACCCTCTCCCAGATCCACTGGGGAAGCAACTTGTaGCGCCAGTGTAAGCACCTGGCCTGTAGGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: GTLSQIHWGSNL*RQCKHLACRHL Trigger: CAGGTGCCTACAGGCCAGGTGCTTACACTGGCGGCACAAGTTGCTTCCCCAGTGGATCTGGGAGAGGGTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CCA 72 bp | GCCAGTGTAAGCACCTGGCCTGTAGGCACCTGGTACTaGCCAGGCTCAGGCCACAGCCCATCAGAAGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: ASVSTWPVGTWY*PGSGHSPSEAN Trigger: GTTTGCTTCTGATGGGCTGTGGCCTGAGCCTGGCCAGTACCAGGTGCCTACAGGCCAGGTGCTTACACTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS TCA 72 bp | CCTGTCCTGCAACGGTGGACACCGTCACCCACAGCTTaGAGGAACCCAAGTGAAGGTTGGGCAGAGTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PVLQRWTPSPTA*RNPSEGWAEWQ Trigger: CTGCCACTCTGCCCAACCTTCACTTGGGTTCCTTCAAGCTGTGGGTGACGGTGTCCACCGTTGCAGGACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS GCA 72 bp | TCCAGGTCACCTTTATCCCTGGGCTCCCATCAGCACTaGTCACTCCCACGTCACAGGGGGCAGATTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SRSPLSLGSHQH*SLPRHRGQILE Trigger: CTCCAGAATCTGCCCCCTGTGACGTGGGAGTGAGCAGTGCTGATGGGAGCCCAGGGATAAAGGTGACCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CAA 72 bp | TCAGGAACCCTCTCCCAGATCCACTGGGGAAGCAACTaGTGCCGCCAGTGTAAGCACCTGGCCTGTAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: SGTLSQIHWGSN*CRQCKHLACRH Trigger: GTGCCTACAGGCCAGGTGCTTACACTGGCGGCACAAGTTGCTTCCCCAGTGGATCTGGGAGAGGGTTCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CAA 90 bp | TTGGCAGGATCAGGAACCCTCTCCCAGATCCACTGGGGAAGCAACTaGTGCCGCCAGTGTAAGCACCTGGCCTGTAGGCACCTGGTACTG | + |
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Preference number: 6 (lower is better) Translates to: LAGSGTLSQIHWGSN*CRQCKHLACRHLVL Trigger: CAGTACCAGGTGCCTACAGGCCAGGTGCTTACACTGGCGGCACAAGTTGCTTCCCCAGTGGATCTGGGAGAGGGTTCCTGATCCTGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CAA 90 bp | TCCGTCCTTGGGCGGTTGGGGCAGGCTCACCTCCTTGATGTAAGGTaGCCCAGAATTGCTGTTGGCAGGATCAGGAACCCTCTCCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: SVLGRLGQAHLLDVR*PRIAVGRIRNPLPD Trigger: ATCTGGGAGAGGGTTCCTGATCCTGCCAACAGCAATTCTGGGCAACCTTACATCAAGGAGGTGAGCCTGCCCCAACCGCCCAAGGACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS TCA 72 bp | GTCCGTCCTTGGGCGGTTGGGGCAGGCTCACCTCCTTaGTGTAAGGTTGCCCAGAATTGCTGTTGGCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: VRPWAVGAGSPP*CKVAQNCCWQD Trigger: ATCCTGCCAACAGCAATTCTGGGCAACCTTACATCAAGGAGGTGAGCCTGCCCCAACCGCCCAAGGACGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS GCA 72 bp | AGTGAAGGTTGGGCAGAGTGGCAGTCTGGGTTTGACTaGTCACGTTCCTGCAGACAGTGGAGAGGCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SEGWAEWQSGFD*SRSCRQWRGLC Trigger: GCAGAGGCCTCTCCACTGTCTGCAGGAACGTGAGCAGTCAAACCCAGACTGCCACTCTGCCCAACCTTCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CCA 72 bp | CTGTTGGCAGGATCAGGAACCCTCTCCCAGATCCACTaGGGAAGCAACTTGTGCCGCCAGTGTAAGCACCTG | + |
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Preference number: 6 (lower is better) Translates to: LLAGSGTLSQIH*GSNLCRQCKHL Trigger: CAGGTGCTTACACTGGCGGCACAAGTTGCTTCCCCAGTGGATCTGGGAGAGGGTTCCTGATCCTGCCAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CAA 72 bp | ACCCAAGTGAAGGTTGGGCAGAGTGGCAGTCTGGGTTaGACTGCTCACGTTCCTGCAGACAGTGGAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: TQVKVGQSGSLG*TAHVPADSGEA Trigger: GGCCTCTCCACTGTCTGCAGGAACGTGAGCAGTCAAACCCAGACTGCCACTCTGCCCAACCTTCACTTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CAA 90 bp | CTTGAAGGAACCCAAGTGAAGGTTGGGCAGAGTGGCAGTCTGGGTTaGACTGCTCACGTTCCTGCAGACAGTGGAGAGGCCTCTGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LEGTQVKVGQSGSLG*TAHVPADSGEASAL Trigger: CAGAGCAGAGGCCTCTCCACTGTCTGCAGGAACGTGAGCAGTCAAACCCAGACTGCCACTCTGCCCAACCTTCACTTGGGTTCCTTCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS TCA 72 bp | CGGGTCCAGTTGAGCTTGTCCAGGCTGTCACCATCTTaGGCCCAGTCCACCACATACTCCAACGGTTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: RVQLSLSRLSPS*AQSTTYSNGFL Trigger: CAGGAAACCGTTGGAGTATGTGGTGGACTGGGCTCAAGATGGTGACAGCCTGGACAAGCTCAACTGGACCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS GCA 72 bp | GCAGAGTGGCAGTCTGGGTTTGACTGCTCACGTTCCTaGAGACAGTGGAGAGGCCTCTGCTCTGTATGCAGA | + |
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Preference number: 6 (lower is better) Translates to: AEWQSGFDCSRS*RQWRGLCSVCR Trigger: TCTGCATACAGAGCAGAGGCCTCTCCACTGTCTGCAGGAACGTGAGCAGTCAAACCCAGACTGCCACTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CAA 90 bp | GGTCTCCAGGTTCACAGAGACAGAGGACCACAGAGGCCGTCCCTTTaGTGTCCCCCAGATGAGGAGTTTGTCAGCCATGGTGAACTGTTC | + |
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Preference number: 6 (lower is better) Translates to: GLQVHRDRGPQRPSL*CPPDEEFVSHGELF Trigger: GAACAGTTCACCATGGCTGACAAACTCCTCATCTGGGGGACACAAAAGGGACGGCCTCTGTGGTCCTCTGTCTCTGTGAACCTGGAGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CAA 90 bp | TGCACACAAGGTCTTGGGTCCTTCCAGACAAGCAGGGCTGCCCGTTaGCCAGAAGTTTCACAGACGGTCCCCGATACCCACACATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: CTQGLGSFQTSRAAR*PEVSQTVPDTHTSS Trigger: TGAAGATGTGTGGGTATCGGGGACCGTCTGTGAAACTTCTGGCAAACGGGCAGCCCTGCTTGTCTGGAAGGACCCAAGACCTTGTGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS TCA 72 bp | GTCCATGTTTCAGCCTGGCATTCCTTGTACCGGAACTaGCAGATGAGAACTTTCTGCGGTGGCCACACGGGC | + |
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Preference number: 6 (lower is better) Translates to: VHVSAWHSLYRN*QMRTFCGGHTG Trigger: GCCCGTGTGGCCACCGCAGAAAGTTCTCATCTGTCAGTTCCGGTACAAGGAATGCCAGGCTGAAACATGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CCA 72 bp | TTTCCTGGTCCCTTGTTTCCAGGTCACCTTTATCCCTaGGCTCCCATCAGCACTGCTCACTCCCACGTCACA | + |
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Preference number: 6 (lower is better) Translates to: FPGPLFPGHLYP*APISTAHSHVT Trigger: TGTGACGTGGGAGTGAGCAGTGCTGATGGGAGCCCAGGGATAAAGGTGACCTGGAAACAAGGGACCAGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CAA 72 bp | GTTCACAGAGACAGAGGACCACAGAGGCCGTCCCTTTaGTGTCCCCCAGATGAGGAGTTTGTCAGCCATGGT | + |
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Preference number: 6 (lower is better) Translates to: VHRDRGPQRPSL*CPPDEEFVSHG Trigger: ACCATGGCTGACAAACTCCTCATCTGGGGGACACAAAAGGGACGGCCTCTGTGGTCCTCTGTCTCTGTGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CAA 72 bp | CCAGTCCACCACATACTCCAACGGTTTCCTGGTCCCTaGTTTCCAGGTCACCTTTATCCCTGGGCTCCCATC | + |
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Preference number: 6 (lower is better) Translates to: PVHHILQRFPGP*FPGHLYPWAPI Trigger: GATGGGAGCCCAGGGATAAAGGTGACCTGGAAACAAGGGACCAGGAAACCGTTGGAGTATGTGGTGGACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CAA 72 bp | ACGGGTCCAGTTGAGCTTGTCCAGGCTGTCACCATCTaGAGCCCAGTCCACCACATACTCCAACGGTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: TGPVELVQAVTI*SPVHHILQRFP Trigger: AGGAAACCGTTGGAGTATGTGGTGGACTGGGCTCAAGATGGTGACAGCCTGGACAAGCTCAACTGGACCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CAA 90 bp | ATCTTGAGCCCAGTCCACCACATACTCCAACGGTTTCCTGGTCCCTaGTTTCCAGGTCACCTTTATCCCTGGGCTCCCATCAGCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: ILSPVHHILQRFPGP*FPGHLYPWAPISTA Trigger: AGCAGTGCTGATGGGAGCCCAGGGATAAAGGTGACCTGGAAACAAGGGACCAGGAAACCGTTGGAGTATGTGGTGGACTGGGCTCAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS TCA 72 bp | AAACTGCTGGCCCAGCAAGGGGTACTAACTCCTCTCTaGATCCCCAAACTGAGGGTGCAGCAGCTAATCCTC | + |
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Preference number: 6 (lower is better) Translates to: KLLAQQGVLTPL*IPKLRVQQLIL Trigger: GAGGATTAGCTGCTGCACCCTCAGTTTGGGGATTCAGAGAGGAGTTAGTACCCCTTGCTGGGCCAGCAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS TCA 72 bp | GGCAGAGCTTTCCACCTGATCCTATTATCTGGTAGGTaGAGTGAAAGGTTGGGACCAGGTGGGCCCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: GRAFHLILLSGR*SERLGPGGPCP Trigger: AGGACAGGGCCCACCTGGTCCCAACCTTTCACTTCACCTACCAGATAATAGGATCAGGTGGAAAGCTCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CCA 72 bp | CAGTCTGGGTTTGACTGCTCACGTTCCTGCAGACAGTaGAGAGGCCTCTGCTCTGTATGCAGAAGGTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: QSGFDCSRSCRQ*RGLCSVCRRCS Trigger: ACTACACCTTCTGCATACAGAGCAGAGGCCTCTCCACTGTCTGCAGGAACGTGAGCAGTCAAACCCAGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CAA 90 bp | CCACTGCACAGTGGCCTCCAGGGTTGCTTCCTCAGAAATATCCACTaGAGAGAAGATCTGGGGTGTGTCTGGCTTCATTTGGGTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: PLHSGLQGCFLRNIH*REDLGCVWLHLGLQ Trigger: CTGGAGACCCAAATGAAGCCAGACACACCCCAGATCTTCTCTCAAGTGGATATTTCTGAGGAAGCAACCCTGGAGGCCACTGTGCAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CCA 72 bp | TGTGGGCAGGAAGTGTTTCTCATACCCAGAGTAAATTaGGGCAGAGGCTTTAGGGGACTCCACAACAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: CGQEVFLIPRVN*GRGFRGLHNRL Trigger: CAGCCTGTTGTGGAGTCCCCTAAAGCCTCTGCCCCAATTTACTCTGGGTATGAGAAACACTTCCTGCCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS TCA 72 bp | CCCACAGGGACAGAAACCAGGGCAGAGCTTTCCACCTaGTCCTATTATCTGGTAGGTGAAGTGAAAGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: PTGTETRAELST*SYYLVGEVKGW Trigger: CCAACCTTTCACTTCACCTACCAGATAATAGGATCAGGTGGAAAGCTCTGCCCTGGTTTCTGTCCCTGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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| CDS CCA 72 bp | AGAAATATCCACTTGAGAGAAGATCTGGGGTGTGTCTaGCTTCATTTGGGTCTCCAGGTTCACAGAGACAGA | + |
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Preference number: 6 (lower is better) Translates to: RNIHLREDLGCV*LHLGLQVHRDR Trigger: TCTGTCTCTGTGAACCTGGAGACCCAAATGAAGCCAGACACACCCCAGATCTTCTCTCAAGTGGATATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005601.9 |
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