Pregenerated sensors for IL27 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044701Ensembl transcript IDs: ENSMUST00000058429.6
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | GGGCTGGATGGCTTTATTAGGCACCCAGCATGGTGGCCTAACTCAAGAGTGAAAAGGGCTTTTAAATTATaGGGTCAGGGCTGGGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: GLDGFIRHPAWWPNSRVKRAFKL*GQGWEL Trigger: TAGCTCCCAGCCCTGACCCAATAATTTAAAAGCCCT...TTTCACTCTTGAGTTAGGCCACCATGCTGGGTGCCTAATAAAGCCATCCAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR CCA 90 bp | AGCCTGTCCTGTGATTGGCCAGACTCCAGCCTTAGAGTCTTAACGGGCGAGGGACTGAGCCTGGGCGCCTaGGCAGGGACAGCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SLSCDWPDSSLRVLTGEGLSLGA*AGTAAA Trigger: TGCTGCTGCTGTCCCTGCCCAGGCGCCCAGGCTCAG...TCCCTCGCCCGTTAAGACTCTAAGGCTGGAGTCTGGCCAATCACAGGACAGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR GCA 90 bp | TCCTGTGATTGGCCAGACTCCAGCCTTAGAGTCTTAACGGGCGAGGGAGGGAGCAAGCGGAGGTGCCTGTaGAGGTCCCGGAGATCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SCDWPDSSLRVLTGEGGSKRRCL*RSRRSS Trigger: GCTGGATCTCCGGGACCTGCACAGGCACCTCCGCTT...GCTCCCTCCCTCGCCCGTTAAGACTCTAAGGCTGGAGTCTGGCCAATCACAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR CCA 90 bp | AGCCTGTCCTGTGATTGGCCAGACTCCAGCCTTAGAGTCTTAACGGGCGAGGGACCAGCCCTCCCAGCATaGCAGGGAAGGGCCGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: SLSCDWPDSSLRVLTGEGPALPA*QGRAEV Trigger: CACTTCGGCCCTTCCCTGCCATGCTGGGAGGGCTGG...TCCCTCGCCCGTTAAGACTCTAAGGCTGGAGTCTGGCCAATCACAGGACAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR TCA 90 bp | AGCCTGTCCTGTGATTGGCCAGACTCCAGCCTTAGAGTCTTAACGGGCGAGGGAGTAGCAGCAACAGGCTaGGCCGCCAGCCAAGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: SLSCDWPDSSLRVLTGEGVAATG*AASQGL Trigger: GAGACCTTGGCTGGCGGCTCAGCCTGTTGCTGCTAC...TCCCTCGCCCGTTAAGACTCTAAGGCTGGAGTCTGGCCAATCACAGGACAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR TCA 90 bp | TCCTGTGATTGGCCAGACTCCAGCCTTAGAGTCTTAACGGGCGAGGGAGGGAGCACTTGGGATGACACCTaGTTGGGGCCACCCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SCDWPDSSLRVLTGEGGSTWDDT*LGPPRA Trigger: GGCTCTGGGTGGCCCCAATCAGGTGTCATCCCAAGT...GCTCCCTCCCTCGCCCGTTAAGACTCTAAGGCTGGAGTCTGGCCAATCACAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR TCA 90 bp | GGGCTGGATGGCTTTATTAGGCACCCAGCATGGTGGCCTAACTCAAGAGTGAAATCCCTGCGCAGCTCTTaGAGGCTCAGGGGGTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: GLDGFIRHPAWWPNSRVKSLRSS*RLRGSV Trigger: AACAGACCCCCTGAGCCTTCAAGAGCTGCGCAGGGA...TTTCACTCTTGAGTTAGGCCACCATGCTGGGTGCCTAATAAAGCCATCCAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR TCA 90 bp | AGCCTGTCCTGTGATTGGCCAGACTCCAGCCTTAGAGTCTTAACGGGCGAGGGATCAGAGTCAGAGAGGTaGTGCCATGCCTGGAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: SLSCDWPDSSLRVLTGEGSESER*CHAWKV Trigger: GACTTTCCAGGCATGGCATCACCTCTCTGACTCTGA...TCCCTCGCCCGTTAAGACTCTAAGGCTGGAGTCTGGCCAATCACAGGACAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR CCA 90 bp | GGGCTGGATGGCTTTATTAGGCACCCAGCATGGTGGCCTAACTCAAGAGTGAAAGGAGATCCAGCCTCATaGCCCACAGCTGCTCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GLDGFIRHPAWWPNSRVKGDPAS*PTAAPS Trigger: AGAGGGAGCAGCTGTGGGCCATGAGGCTGGATCTCC...TTTCACTCTTGAGTTAGGCCACCATGCTGGGTGCCTAATAAAGCCATCCAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR TCA 90 bp | AGCCTGTCCTGTGATTGGCCAGACTCCAGCCTTAGAGTCTTAACGGGCGAGGGAGTCCTCCTCCTCCTTTaGACATTTGAATCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SLSCDWPDSSLRVLTGEGVLLLL*TFESCS Trigger: GCTGCAGGATTCAAATGTTCAAAGGAGGAGGAGGAC...TCCCTCGCCCGTTAAGACTCTAAGGCTGGAGTCTGGCCAATCACAGGACAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR GCA 90 bp | AGCCTGTCCTGTGATTGGCCAGACTCCAGCCTTAGAGTCTTAACGGGCGAGGGAAGAGAGGTGATGCCATaGCTGGAAAGTCAGGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: SLSCDWPDSSLRVLTGEGREVMP*LESQGN Trigger: GTTTCCCTGACTTTCCAGGCATGGCATCACCTCTCT...TCCCTCGCCCGTTAAGACTCTAAGGCTGGAGTCTGGCCAATCACAGGACAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR TCA 90 bp | AATAAATATCTGGTAAGGACTGGAGGGCTTTTAAATTATTGGGTCAGGGCTGGGCAGCTGCTCCCTCTCTaGGCTGGTCCAGGTCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: NKYLVRTGGLLNYWVRAGQLLPL*AGPGPL Trigger: CAGGGGACCTGGACCAGCTCAGAGAGGGAGCAGCTG...CCCAGCCCTGACCCAATAATTTAAAAGCCCTCCAGTCCTTACCAGATATTTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR TCA 90 bp | AATAAATATCTGGTAAGGACTGGAGGGCTTTTAAATTATTGGGTCAGGGCTGGGTTAGGAATCCCAGGCTaGGCCTGGGCGCCTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: NKYLVRTGGLLNYWVRAGLGIPG*AWAPGQ Trigger: CTGCCCAGGCGCCCAGGCTCAGCCTGGGATTCCTAA...CCCAGCCCTGACCCAATAATTTAAAAGCCCTCCAGTCCTTACCAGATATTTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR CCA 90 bp | GGGCTGGATGGCTTTATTAGGCACCCAGCATGGTGGCCTAACTCAAGAGTGAAAGAAACATTGGGAAGATaGTATCCCAGGGGCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GLDGFIRHPAWWPNSRVKETLGR*YPRGRR Trigger: CCTCCTGCCCCTGGGATACCATCTTCCCAATGTTTC...TTTCACTCTTGAGTTAGGCCACCATGCTGGGTGCCTAATAAAGCCATCCAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR CCA 90 bp | GGCAAACGAGCTAGAGCCTGTCCTGTGATTGGCCAGACTCCAGCCTTAGAGTCTAAGTCAGGGAAACATTaGGAAGATGGTATCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GKRARACPVIGQTPALESKSGKH*EDGIPG Trigger: CCCTGGGATACCATCTTCCCAATGTTTCCCTGACTT...AGACTCTAAGGCTGGAGTCTGGCCAATCACAGGACAGGCTCTAGCTCGTTTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR TCA 90 bp | AATAAATATCTGGTAAGGACTGGAGGGCTTTTAAATTATTGGGTCAGGGCTGGGCCAGGACACTTGGGATaGCACCTGATTGGGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: NKYLVRTGGLLNYWVRAGPGHLG*HLIGAT Trigger: GGTGGCCCCAATCAGGTGTCATCCCAAGTGTCCTGG...CCCAGCCCTGACCCAATAATTTAAAAGCCCTCCAGTCCTTACCAGATATTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS TCA 90 bp | TTCCTGGCAAGGTACAGGCTGACTGTGAATTCCCTGCGCAGCTCTTaGAGGCTCAGGGGGTCTGTTGGGAACCCCCAGGAACCAGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: FLARYRLTVNSLRSS*RLRGSVGNPQEPAC Trigger: ACAAGCTGGTTCCTGGGGGTTCCCAACAGACCCCCTGAGCCTTCAAGAGCTGCGCAGGGAATTCACAGTCAGCCTGTACCTTGCCAGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR CAA 90 bp | GGGCTGGATGGCTTTATTAGGCACCCAGCATGGTGGCCTAACTCAAGAGTGAAAGGCTCAGGGGGTCTGTaGGGAACCCCCAGGAACCAG | + |
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Preference number: 5 (lower is better) Translates to: GLDGFIRHPAWWPNSRVKGSGGL*GTPRNQ Trigger: CTGGTTCCTGGGGGTTCCCAACAGACCCCCTGAGCC...TTTCACTCTTGAGTTAGGCCACCATGCTGGGTGCCTAATAAAGCCATCCAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS TCA 90 bp | TTGTCCTCCTCCTCCTTTGAACATTTGAATCCTGCAGCCAGCACCTaGAAGCGGAGGTGCCTGTGCAGGTCCCGGAGATCCAGCCTCATG | + |
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Preference number: 5 (lower is better) Translates to: LSSSSFEHLNPAAST*KRRCLCRSRRSSLM Trigger: CATGAGGCTGGATCTCCGGGACCTGCACAGGCACCTCCGCTTTCAGGTGCTGGCTGCAGGATTCAAATGTTCAAAGGAGGAGGAGGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS CCA 90 bp | CAGAGTCAGAGAGGTGATGCCATGCCTGGAAAGTCAGGGAAACATTaGGAAGATGGTATCCCAGGGGCAGGAGGTCCAGGTTCACTCCTG | + |
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Preference number: 5 (lower is better) Translates to: QSQRGDAMPGKSGKH*EDGIPGAGGPGSLL Trigger: CAGGAGTGAACCTGGACCTCCTGCCCCTGGGATACCATCTTCCCAATGTTTCCCTGACTTTCCAGGCATGGCATCACCTCTCTGACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR CAA 90 bp | TCCTGTGATTGGCCAGACTCCAGCCTTAGAGTCTTAACGGGCGAGGGAGGGAGCTCCTCCTTTGAACATTaGAATCCTGCAGCCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: SCDWPDSSLRVLTGEGGSSSFEH*NPAAST Trigger: GGTGCTGGCTGCAGGATTCAAATGTTCAAAGGAGGA...GCTCCCTCCCTCGCCCGTTAAGACTCTAAGGCTGGAGTCTGGCCAATCACAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR CAA 90 bp | TCCTGTGATTGGCCAGACTCCAGCCTTAGAGTCTTAACGGGCGAGGGAGGGAGCAAAGTCAGGGAAACATaGGGAAGATGGTATCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SCDWPDSSLRVLTGEGGSKVRET*GRWYPR Trigger: CCTGGGATACCATCTTCCCAATGTTTCCCTGACTTT...GCTCCCTCCCTCGCCCGTTAAGACTCTAAGGCTGGAGTCTGGCCAATCACAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS TCA 90 bp | TTCTTCTTCCTCCTCTTCCTCTTCCTCCTTGTCCTCCTCCTCCTTTaGACATTTGAATCCTGCAGCCAGCACCTGAAAGCGGAGGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: FFFLLFLFLLVLLLL*TFESCSQHLKAEVP Trigger: AGGCACCTCCGCTTTCAGGTGCTGGCTGCAGGATTCAAATGTTCAAAGGAGGAGGAGGACAAGGAGGAAGAGGAAGAGGAGGAAGAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS TCA 90 bp | CGAAGTGTGGTAGCGAGGAAGCAGAGTCTCTCAGAGTCAGAGAGGTaGTGCCATGCCTGGAAAGTCAGGGAAACATTGGGAAGATGGTAT | + |
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Preference number: 5 (lower is better) Translates to: RSVVARKQSLSESER*CHAWKVRETLGRWY Trigger: ATACCATCTTCCCAATGTTTCCCTGACTTTCCAGGCATGGCATCACCTCTCTGACTCTGAGAGACTCTGCTTCCTCGCTACCACACTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS-3UTR CAA 90 bp | AATAAATATCTGGTAAGGACTGGAGGGCTTTTAAATTATTGGGTCAGGGCTGGGTTCCCTGCGCAGCTCTaGAAGGCTCAGGGGGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: NKYLVRTGGLLNYWVRAGFPAQL*KAQGVC Trigger: ACAGACCCCCTGAGCCTTCAAGAGCTGCGCAGGGAA...CCCAGCCCTGACCCAATAATTTAAAAGCCCTCCAGTCCTTACCAGATATTTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS CAA 90 bp | CTTCCTGGCAAGGTACAGGCTGACTGTGAATTCCCTGCGCAGCTCTaGAAGGCTCAGGGGGTCTGTTGGGAACCCCCAGGAACCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: LPGKVQADCEFPAQL*KAQGVCWEPPGTSL Trigger: CAAGCTGGTTCCTGGGGGTTCCCAACAGACCCCCTGAGCCTTCAAGAGCTGCGCAGGGAATTCACAGTCAGCCTGTACCTTGCCAGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS CCA 72 bp | TTCCCTGCGCAGCTCTTGAAGGCTCAGGGGGTCTGTTaGGAACCCCCAGGAACCAGCTTGTACCAGAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: FPAQLLKAQGVC*EPPGTSLYQKQ Trigger: TTGCTTCTGGTACAAGCTGGTTCCTGGGGGTTCCCAACAGACCCCCTGAGCCTTCAAGAGCTGCGCAGGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS CAA 72 bp | ATTCCCTGCGCAGCTCTTGAAGGCTCAGGGGGTCTGTaGGGAACCCCCAGGAACCAGCTTGTACCAGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: IPCAALEGSGGL*GTPRNQLVPEA Trigger: TGCTTCTGGTACAAGCTGGTTCCTGGGGGTTCCCAACAGACCCCCTGAGCCTTCAAGAGCTGCGCAGGGAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS TCA 72 bp | TCCTCCTTTGAACATTTGAATCCTGCAGCCAGCACCTaGAAGCGGAGGTGCCTGTGCAGGTCCCGGAGATCC | + |
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Preference number: 6 (lower is better) Translates to: SSFEHLNPAAST*KRRCLCRSRRS Trigger: GGATCTCCGGGACCTGCACAGGCACCTCCGCTTTCAGGTGCTGGCTGCAGGATTCAAATGTTCAAAGGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS CCA 72 bp | ATGGTATCCCAGGGGCAGGAGGTCCAGGTTCACTCCTaGCAATCGAGATTCAGCAAAGCTGTGGACATAGCC | + |
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Preference number: 6 (lower is better) Translates to: MVSQGQEVQVHS*QSRFSKAVDIA Trigger: GGCTATGTCCACAGCTTTGCTGAATCTCGATTGCCAGGAGTGAACCTGGACCTCCTGCCCCTGGGATACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS CCA 72 bp | TGCCATGCCTGGAAAGTCAGGGAAACATTGGGAAGATaGTATCCCAGGGGCAGGAGGTCCAGGTTCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: CHAWKVRETLGR*YPRGRRSRFTP Trigger: AGGAGTGAACCTGGACCTCCTGCCCCTGGGATACCATCTTCCCAATGTTTCCCTGACTTTCCAGGCATGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS CCA 72 bp | AGAGGTGATGCCATGCCTGGAAAGTCAGGGAAACATTaGGAAGATGGTATCCCAGGGGCAGGAGGTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: RGDAMPGKSGKH*EDGIPGAGGPG Trigger: ACCTGGACCTCCTGCCCCTGGGATACCATCTTCCCAATGTTTCCCTGACTTTCCAGGCATGGCATCACCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS TCA 72 bp | CTCCTCTTCCTCTTCCTCCTTGTCCTCCTCCTCCTTTaGACATTTGAATCCTGCAGCCAGCACCTGAAAGCG | + |
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Preference number: 6 (lower is better) Translates to: LLFLFLLVLLLL*TFESCSQHLKA Trigger: CGCTTTCAGGTGCTGGCTGCAGGATTCAAATGTTCAAAGGAGGAGGAGGACAAGGAGGAAGAGGAAGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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| CDS CAA 90 bp | AGGGGCAGCTTCTTTTCTTCTTCTTCCTCCTCTTCCTCTTCCTCCTaGTCCTCCTCCTCCTTTGAACATTTGAATCCTGCAGCCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: RGSFFSSSSSSSSSS*SSSSFEHLNPAAST Trigger: GGTGCTGGCTGCAGGATTCAAATGTTCAAAGGAGGAGGAGGACAAGGAGGAAGAGGAAGAGGAGGAAGAAGAAGAAAAGAAGCTGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058429.6 |
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